Cluster composition

Functions

Category	Name	IntersectionWithQuery	PValue	GenesInTerm	GenesInQuery	GenesInTermInQuery	ID
GeneOntologyMolecularFunction	K63-linked polyubiquitin modification-dependent protein binding	RNF169 PRPF8 TAB3	7.39e-05	26	63	3	GO:0070530
GeneOntologyCellularComponent	U2-type catalytic step 1 spliceosome	YJU2 PRPF8 SNRNP200	9.73e-06	14	64	3	GO:0071006
GeneOntologyCellularComponent	catalytic step 1 spliceosome	YJU2 PRPF8 SNRNP200	9.73e-06	14	64	3	GO:0071012
GeneOntologyCellularComponent	aryl hydrocarbon receptor complex	ARNT ARNT2	2.55e-04	8	64	2	GO:0034751
Domain	SNO	SBNO1 SBNO2	1.16e-05	2	64	2	IPR026741
Domain	SBNO_Helicase_C_dom	SBNO1 SBNO2	1.16e-05	2	64	2	IPR026937
Domain	Helicase_C_4	SBNO1 SBNO2	1.16e-05	2	64	2	PF13871
Domain	Nuc_translocat	ARNT ARNT2	3.19e-04	8	64	2	IPR001067
Domain	-	ARNT BHLHA15 ARNT2 HES4	5.33e-04	109	64	4	4.10.280.10
Domain	HLH	ARNT BHLHA15 ARNT2 HES4	5.71e-04	111	64	4	PF00010
Domain	HLH	ARNT BHLHA15 ARNT2 HES4	6.74e-04	116	64	4	SM00353
Domain	BHLH	ARNT BHLHA15 ARNT2 HES4	6.96e-04	117	64	4	PS50888
Domain	bHLH_dom	ARNT BHLHA15 ARNT2 HES4	7.18e-04	118	64	4	IPR011598
Domain	LH2	LOXHD1 PKDREJ	1.71e-03	18	64	2	SM00308
Domain	PLAT	LOXHD1 PKDREJ	2.33e-03	21	64	2	PS50095
Domain	-	LOXHD1 PKDREJ	2.33e-03	21	64	2	2.60.60.20
Domain	PLAT	LOXHD1 PKDREJ	2.33e-03	21	64	2	PF01477
Domain	PLAT/LH2_dom	LOXHD1 PKDREJ	2.33e-03	21	64	2	IPR001024
Domain	zf-RanBP	TAB3 CAPN15	2.55e-03	22	64	2	PF00641
Domain	PAS_fold_3	ARNT ARNT2	2.79e-03	23	64	2	IPR013655
Domain	ZnF_RBZ	TAB3 CAPN15	2.79e-03	23	64	2	SM00547
Domain	PAS_3	ARNT ARNT2	2.79e-03	23	64	2	PF08447
Domain	ZF_RANBP2_2	TAB3 CAPN15	2.79e-03	23	64	2	PS50199
Domain	PAS-assoc_C	ARNT ARNT2	3.04e-03	24	64	2	IPR000700
Domain	ZF_RANBP2_1	TAB3 CAPN15	3.04e-03	24	64	2	PS01358
Domain	PAS	ARNT ARNT2	3.30e-03	25	64	2	PF00989
Domain	PAS_fold	ARNT ARNT2	3.30e-03	25	64	2	IPR013767
Domain	Znf_RanBP2	TAB3 CAPN15	3.30e-03	25	64	2	IPR001876
Domain	PAC	ARNT ARNT2	3.56e-03	26	64	2	IPR001610
Domain	PAC	ARNT ARNT2	3.56e-03	26	64	2	SM00086
Domain	PAC	ARNT ARNT2	3.56e-03	26	64	2	PS50113
Domain	PAS	ARNT ARNT2	5.37e-03	32	64	2	SM00091
Domain	PAS	ARNT ARNT2	6.04e-03	34	64	2	IPR000014
Domain	PAS	ARNT ARNT2	6.04e-03	34	64	2	PS50112
Pathway	REACTOME_TRANSCRIPTIONAL_REGULATION_BY_NPAS4	ARNT ARNT2	9.46e-05	5	44	2	MM16637
Pathway	REACTOME_ARYL_HYDROCARBON_RECEPTOR_SIGNALLING	ARNT ARNT2	1.42e-04	6	44	2	M27793
Pathway	REACTOME_TRANSCRIPTIONAL_REGULATION_BY_NPAS4	ARNT AGO4 ARNT2	1.59e-04	34	44	3	M46422
Pathway	REACTOME_ARYL_HYDROCARBON_RECEPTOR_SIGNALLING	ARNT ARNT2	1.98e-04	7	44	2	MM15528
Pubmed	Structure of a human catalytic step I spliceosome.	YJU2 PRPF8 SNRNP200	7.41e-07	10	65	3	29301961
Pubmed	Divergent expression patterns for hypoxia-inducible factor-1beta and aryl hydrocarbon receptor nuclear transporter-2 in developing kidney.	ARNT ARNT2	3.44e-06	2	65	2	15466261
Pubmed	Unique and overlapping transcriptional roles of arylhydrocarbon receptor nuclear translocator (Arnt) and Arnt2 in xenobiotic and hypoxic responses.	ARNT ARNT2	3.44e-06	2	65	2	17023418
Pubmed	Study of Strawberry Notch homolog 1 and 2 expression in human glioblastoma.	SBNO1 SBNO2	3.44e-06	2	65	2	36695974
Pubmed	PRPF8-mediated dysregulation of hBrr2 helicase disrupts human spliceosome kinetics and 5´-splice-site selection causing tissue-specific defects.	PRPF8 SNRNP200	3.44e-06	2	65	2	38605034
Pubmed	Variability in clinical phenotypes of PRPF8-linked autosomal dominant retinitis pigmentosa correlates with differential PRPF8/SNRNP200 interactions.	PRPF8 SNRNP200	3.44e-06	2	65	2	29087248
Pubmed	The inactive C-terminal cassette of the dual-cassette RNA helicase BRR2 both stimulates and inhibits the activity of the N-terminal helicase unit.	PRPF8 SNRNP200	3.44e-06	2	65	2	31914407
Pubmed	Inhibition of RNA helicase Brr2 by the C-terminal tail of the spliceosomal protein Prp8.	PRPF8 SNRNP200	3.44e-06	2	65	2	23704370
Pubmed	Transcriptional activation of CBFβ by CDK11p110 is necessary to promote osteosarcoma cell proliferation.	CDK11B CBFB	3.44e-06	2	65	2	31610798
Pubmed	KSHV episome tethering sites on host chromosomes and regulation of latency-lytic switch by CHD4.	SAFB SBNO1 RBM33 PRPF8 SNRNP200	4.66e-06	130	65	5	35545047
Pubmed	Interaction between the scaffold proteins CBP by IQGAP1 provides an interface between gene expression and cytoskeletal activity.	HIVEP2 HUWE1 SNRNP200 IQGAP1	8.77e-06	69	65	4	32238831
Pubmed	Expression of Arnt and Arnt2 mRNA in developing murine tissues.	ARNT ARNT2	1.03e-05	3	65	2	12502753
Pubmed	Mutation Analysis of Pre-mRNA Splicing Genes PRPF31, PRPF8, and SNRNP200 in Chinese Families with Autosomal Dominant Retinitis Pigmentosa.	PRPF8 SNRNP200	1.03e-05	3	65	2	30360737
Pubmed	Structures of NPAS4-ARNT and NPAS4-ARNT2 heterodimers reveal new dimerization modalities in the bHLH-PAS transcription factor family.	ARNT ARNT2	1.03e-05	3	65	2	36343253
Pubmed	cDNA cloning and tissue-specific expression of a novel basic helix-loop-helix/PAS factor (Arnt2) with close sequence similarity to the aryl hydrocarbon receptor nuclear translocator (Arnt).	ARNT ARNT2	1.03e-05	3	65	2	8657146
Pubmed	Analysis of Ah receptor-ARNT and Ah receptor-ARNT2 complexes in vitro and in cell culture.	ARNT ARNT2	1.03e-05	3	65	2	18096572
Pubmed	Structure of a multipartite protein-protein interaction domain in splicing factor prp8 and its link to retinitis pigmentosa.	PRPF8 SNRNP200	1.03e-05	3	65	2	17317632
Pubmed	WWP2 ubiquitylates RNA polymerase II for DNA-PK-dependent transcription arrest and repair at DNA breaks.	DGCR2 SAFB SMARCB1 PRPF8 SNRNP200 RPL12 IQGAP1 DNTTIP1	1.90e-05	615	65	8	31048545
Pubmed	Proteomics analysis of nucleolar SUMO-1 target proteins upon proteasome inhibition.	PRPF8 SNRNP200 IQGAP1	1.97e-05	28	65	3	19596686
Pubmed	Trans-infection but not infection from within endosomal compartments after cell-to-cell HIV-1 transfer to CD4+ T cells.	CD4 DNM1	2.06e-05	4	65	2	22846998
Pubmed	A mouse homologue of Strawberry Notch is transcriptionally regulated by Reelin signal.	SBNO1 SBNO2	2.06e-05	4	65	2	17045962
Pubmed	Structure and Conformational Dynamics of the Human Spliceosomal Bact Complex.	PRPF8 SNRNP200	2.06e-05	4	65	2	29361316
Pubmed	Chr21 protein-protein interactions: enrichment in proteins involved in intellectual disability, autism, and late-onset Alzheimer's disease.	KDM5B CFAP91 HIVEP2 SBNO1 ATRNL1 HUWE1 DNM1 CBFB PRPF8 SNRNP200 IQGAP1	2.41e-05	1285	65	11	35914814
Pubmed	PINK1 Content in Mitochondria is Regulated by ER-Associated Degradation.	SCN5A HUWE1 MAGEE1 PRPF8 SNRNP200 RPL12 IQGAP1	3.06e-05	477	65	7	31300519
Pubmed	An organelle-specific protein landscape identifies novel diseases and molecular mechanisms.	KIAA1671 CDK17 CFAP91 TCHP SBNO1 RPGR PRPF8 CSPP1 SNRNP200 MKS1 IQGAP1	3.10e-05	1321	65	11	27173435
Pubmed	RUNX transcription factor-mediated association of Cd4 and Cd8 enables coordinate gene regulation.	CD4 CBFB	3.43e-05	5	65	2	21435585
Pubmed	The Emergence and Functional Fitness of Memory CD4+ T Cells Require the Transcription Factor Thpok.	CD4 CBFB	3.43e-05	5	65	2	30638736
Pubmed	The human U5-220kD protein (hPrp8) forms a stable RNA-free complex with several U5-specific proteins, including an RNA unwindase, a homologue of ribosomal elongation factor EF-2, and a novel WD-40 protein.	PRPF8 SNRNP200	3.43e-05	5	65	2	9774689
Pubmed	Expression of ARNT, ARNT2, HIF1 alpha, HIF2 alpha and Ah receptor mRNAs in the developing mouse.	ARNT ARNT2	3.43e-05	5	65	2	9545558
Pubmed	The core SWI/SNF catalytic subunit Brg1 regulates nephron progenitor cell proliferation and differentiation.	BMP7 SMARCB1 RPL12	3.91e-05	35	65	3	32504627
Pubmed	Tagging genes with cassette-exchange sites.	KDM5B RNF169 SAFB SBNO1 RPGR RPL12	3.91e-05	335	65	6	15741177
Pubmed	Isolation and characterization of AINT: a novel ARNT interacting protein expressed during murine embryonic development.	ARNT ARNT2	5.13e-05	6	65	2	11025203
Pubmed	The human homologue of the yeast splicing factor prp6p contains multiple TPR elements and is stably associated with the U5 snRNP via protein-protein interactions.	PRPF8 SNRNP200	5.13e-05	6	65	2	10788320
Pubmed	Two new members of the murine Sim gene family are transcriptional repressors and show different expression patterns during mouse embryogenesis.	ARNT ARNT2	5.13e-05	6	65	2	8927054
Pubmed	Tumor suppressor RBM5 directly interacts with the DExD/H-box protein DHX15 and stimulates its helicase activity.	PRPF8 SNRNP200	5.13e-05	6	65	2	22569250
Pubmed	Separate necdin domains bind ARNT2 and HIF1alpha and repress transcription.	ARNT ARNT2	5.13e-05	6	65	2	17826745
Pubmed	Epigenetic propagation of CD4 expression is established by the Cd4 proximal enhancer in helper T cells.	CD4 CBFB	5.13e-05	6	65	2	20360383
Pubmed	Cockayne syndrome group A and ferrochelatase finely tune ribosomal gene transcription and its response to UV irradiation.	PRPF8 SNRNP200 IQGAP1	6.79e-05	42	65	3	34581821
Pubmed	Identification of a novel basic helix-loop-helix-PAS factor, NXF, reveals a Sim2 competitive, positive regulatory role in dendritic-cytoskeleton modulator drebrin gene expression.	ARNT ARNT2	7.18e-05	7	65	2	14701734
Pubmed	NPAS1-ARNT and NPAS3-ARNT crystal structures implicate the bHLH-PAS family as multi-ligand binding transcription factors.	ARNT ARNT2	7.18e-05	7	65	2	27782878
Pubmed	MAGED1 is a novel regulator of a select subset of bHLH PAS transcription factors.	ARNT ARNT2	7.18e-05	7	65	2	27472814
Pubmed	The TIP60 Complex Is a Conserved Coactivator of HIF1A.	ARNT PRPF8 SNRNP200 IQGAP1	7.76e-05	120	65	4	27320910
Pubmed	MYC multimers shield stalled replication forks from RNA polymerase.	RNF169 SAFB CDK11B HUWE1 PRPF8 SNRNP200 RPL12 IQGAP1 DNTTIP1	8.99e-05	989	65	9	36424410
Pubmed	Death by splicing: tumor suppressor RBM5 freezes splice-site pairing.	PRPF8 SNRNP200	9.56e-05	8	65	2	18951082
Pubmed	Differential activities of murine single minded 1 (SIM1) and SIM2 on a hypoxic response element. Cross-talk between basic helix-loop-helix/per-Arnt-Sim homology transcription factors.	ARNT ARNT2	9.56e-05	8	65	2	11782478
Pubmed	The Oncogenic PRL Protein Causes Acid Addiction of Cells by Stimulating Lysosomal Exocytosis.	ARNT SCN5A SMARCB1	1.08e-04	49	65	3	32918875
Pubmed	Synthetic Lethal and Resistance Interactions with BET Bromodomain Inhibitors in Triple-Negative Breast Cancer.	RNF169 SAFB YJU2 SBNO1 SMARCB1 CDK11B CBFB PRPF8 IQGAP1	1.09e-04	1014	65	9	32416067
Pubmed	Loss of ER retention motif of AGR2 can impact mTORC signaling and promote cancer metastasis.	RMDN3 DUOX1 SAFB HUWE1 PRPF8 SNRNP200 RPL12 IQGAP1	1.28e-04	807	65	8	30575818
Pubmed	CHD3 and CHD4 form distinct NuRD complexes with different yet overlapping functionality.	SAFB SMARCB1 CDK11B PRPF8 SNRNP200 RPL12 IQGAP1	1.35e-04	605	65	7	28977666
Pubmed	HIF-dependent hematopoietic factors regulate the development of the embryonic vasculature.	ARNT ARNT2	1.53e-04	10	65	2	16824955
Pubmed	Targeted mutation of the murine arylhydrocarbon receptor nuclear translocator 2 (Arnt2) gene reveals partial redundancy with Arnt.	ARNT ARNT2	1.87e-04	11	65	2	11381139
Pubmed	Ribosomal protein L12 uses a distinct nuclear import pathway mediated by importin 11.	HUWE1 RPL12	1.87e-04	11	65	2	11809816
Pubmed	LGALS3BP regulates centriole biogenesis and centrosome hypertrophy in cancer cells.	CDK17 PPP1R12B HUWE1 PRPF8 SNRNP200 RPL12 IQGAP1	1.89e-04	639	65	7	23443559
Pubmed	Proteomic analyses reveal distinct chromatin-associated and soluble transcription factor complexes.	RMDN3 ARNT BHLHA15 SMARCB1 HUWE1 PRPF8 SNRNP200 DNTTIP1	1.92e-04	857	65	8	25609649
Pubmed	The Eyes Absent family members EYA4 and EYA1 promote PLK1 activation and successful mitosis through tyrosine dephosphorylation.	ARNT TCHP RBM33 TAB3	1.93e-04	152	65	4	38360978
Pubmed	Systematic identification of factors for provirus silencing in embryonic stem cells.	HUWE1 PRPF8 SNRNP200 SBNO2	1.98e-04	153	65	4	26365490
Pubmed	The nuclear cap-binding complex interacts with the U4/U6·U5 tri-snRNP and promotes spliceosome assembly in mammalian cells.	PRPF8 SNRNP200	2.24e-04	12	65	2	23793891
Pubmed	Cyclin-dependent kinases: a family portrait.	CDK17 CDK11B	2.24e-04	12	65	2	19884882
Pubmed	Identification of the hypoxia-inducible factor 2α nuclear interactome in melanoma cells reveals master proteins involved in melanoma development.	ARNT ARNT2 SMARCB1	2.62e-04	66	65	3	23275444
Pubmed	Global gene expression analysis in fetal mouse ovaries with and without meiosis and comparison of selected genes with meiosis in the testis.	CSPP1 TAB3	2.65e-04	13	65	2	17431699
Pubmed	The network of protein-protein interactions within the human U4/U6.U5 tri-snRNP.	PRPF8 SNRNP200	2.65e-04	13	65	2	16723661
Pubmed	Human U4/U6.U5 and U4atac/U6atac.U5 tri-snRNPs exhibit similar protein compositions.	PRPF8 SNRNP200	3.08e-04	14	65	2	11971955
Pubmed	The protein interaction landscape of the human CMGC kinase group.	CDK17 RNF169 HUWE1 SNURF PRPF8 SNRNP200 IQGAP1	3.15e-04	695	65	7	23602568
Pubmed	DNAJC17 is localized in nuclear speckles and interacts with splicing machinery components.	PRPF8 SNRNP200 RPL12	3.25e-04	71	65	3	29773831
Pubmed	FBXO22 promotes leukemogenesis by targeting BACH1 in MLL-rearranged acute myeloid leukemia.	LOXHD1 RBM33 SMARCB1 CDK11B PRPF8 CSPP1	3.35e-04	497	65	6	36774506
Pubmed	WNT signals are required for the initiation of hair follicle development.	BMP7 WNT10B	3.56e-04	15	65	2	12015971
Pubmed	A probability-based approach for high-throughput protein phosphorylation analysis and site localization.	RNF169 SAFB CDK11B HUWE1 RPL12 IQGAP1	3.57e-04	503	65	6	16964243
Pubmed	ZBTB2 protein is a new partner of the Nucleosome Remodeling and Deacetylase (NuRD) complex.	RMDN3 SAFB CDK11B PRPF8 SNRNP200	3.87e-04	330	65	5	33301849
Pubmed	Identification of SUMO Binding Proteins Enriched after Covalent Photo-Cross-Linking.	SAFB HUWE1 PRPF8 SNRNP200 IQGAP1	3.97e-04	332	65	5	32786267
Pubmed	Sustained epithelial beta-catenin activity induces precocious hair development but disrupts hair follicle down-growth and hair shaft formation.	BMP7 WNT10B	4.06e-04	16	65	2	18256193
Pubmed	Delineating the HMGB1 and HMGB2 interactome in prostate and ovary epithelial cells and its relationship with cancer.	SAFB PRPF8 SNRNP200 RPL12	4.33e-04	188	65	4	29721183
Pubmed	A Brg1 mutation that uncouples ATPase activity from chromatin remodeling reveals an essential role for SWI/SNF-related complexes in beta-globin expression and erythroid development.	CD4 SMARCB1	4.59e-04	17	65	2	16287714
Pubmed	Nonsyndromic Retinitis Pigmentosa Overview	RPGR PRPF8 SNRNP200	4.79e-04	81	65	3	20301590
Pubmed	Optimized fragmentation schemes and data analysis strategies for proteome-wide cross-link identification.	RBM33 CDK11B PRPF8 SNRNP200 RPL12 IQGAP1	5.08e-04	538	65	6	28524877
Pubmed	Interaction network of human early embryonic transcription factors.	KIAA1671 ARNT HIVEP2 SMARCB1 DNTTIP1	5.12e-04	351	65	5	38297188
Pubmed	T lymphocytes amplify the anabolic activity of parathyroid hormone through Wnt10b signaling.	CD4 WNT10B	5.16e-04	18	65	2	19723499
Pubmed	RSPO-LGR4 functions via IQGAP1 to potentiate Wnt signaling.	SAFB PRPF8 SNRNP200 IQGAP1	5.67e-04	202	65	4	24639526
Pubmed	Reciprocal regulation of CD4/CD8 expression by SWI/SNF-like BAF complexes.	CD4 SMARCB1	5.76e-04	19	65	2	12110891
Pubmed	BS69/ZMYND11 reads and connects histone H3.3 lysine 36 trimethylation-decorated chromatin to regulated pre-mRNA processing.	PRPF8 SNRNP200	5.76e-04	19	65	2	25263594
Pubmed	Ubiquitin-Independent Disassembly by a p97 AAA-ATPase Complex Drives PP1 Holoenzyme Formation.	KIAA1671 RNF169 PPP1R12B PRPF8 RPL12	5.81e-04	361	65	5	30344098
Pubmed	Large-scale characterization of HeLa cell nuclear phosphoproteins.	RNF169 SAFB SPATA19 CDK11B HUWE1 SNRNP200 IQGAP1	5.98e-04	774	65	7	15302935
Pubmed	Host cell interactome of HIV-1 Rev includes RNA helicases involved in multiple facets of virus production.	SAFB HUWE1 PRPF8 SNRNP200	6.10e-04	206	65	4	22174317
Pubmed	DBIRD complex integrates alternative mRNA splicing with RNA polymerase II transcript elongation.	SAFB PRPF8 SNRNP200	6.31e-04	89	65	3	22446626
Pubmed	Transcriptional regulation of endochondral ossification by HIF-2alpha during skeletal growth and osteoarthritis development.	ARNT ARNT2	6.39e-04	20	65	2	20495570
Pubmed	OTUB2 Promotes Cancer Metastasis via Hippo-Independent Activation of YAP and TAZ.	SMARCB1 SNRNP200 TAB3	6.73e-04	91	65	3	30472188
Pubmed	The Role of CDKs and CDKIs in Murine Development.	CDK17 CDK11B	7.06e-04	21	65	2	32731332
Pubmed	Long-range enhancers regulating Myc expression are required for normal facial morphogenesis.	KDM5B BMP7	7.06e-04	21	65	2	24859337
Pubmed	The mRNA-bound proteome and its global occupancy profile on protein-coding transcripts.	SAFB RBM33 CDK11B DNM1 PRPF8 SNRNP200 RPL12	7.64e-04	807	65	7	22681889
Pubmed	TRIM33 drives prostate tumor growth by stabilizing androgen receptor from Skp2-mediated degradation.	ARNT SMARCB1 PRPF8 SNRNP200	7.80e-04	220	65	4	35785414
Pubmed	GRWD1 regulates ribosomal protein L23 levels via the ubiquitin-proteasome system.	HUWE1 SNRNP200 RPL12 IQGAP1	7.93e-04	221	65	4	29991511
Pubmed	Genome-wide CRISPR screens identify novel regulators of wild-type and mutant p53 stability.	KIAA1671 ARNT TCHP RBM33 CDK11B HUWE1	8.08e-04	588	65	6	38580884
Pubmed	Phylogenetic and expression analysis of the basic helix-loop-helix transcription factor gene family: genomic approach to cellular differentiation.	ARNT BHLHA15 ARNT2	8.35e-04	98	65	3	18557763
Pubmed	The inductive role of Wnt-β-Catenin signaling in the formation of oral apparatus.	BMP7 WNT10B	8.48e-04	23	65	2	21600200
Pubmed	Gene essentiality and synthetic lethality in haploid human cells.	SMARCB1 PRPF8 SNRNP200 IQGAP1	9.05e-04	229	65	4	26472760
Pubmed	Prediction of the coding sequences of unidentified human genes. XVIII. The complete sequences of 100 new cDNA clones from brain which code for large proteins in vitro.	AGO4 HUWE1 MAGEE1	9.11e-04	101	65	3	10997877
Pubmed	FGF signaling regulates the number of posterior taste papillae by controlling progenitor field size.	BMP7 WNT10B	9.24e-04	24	65	2	21655085
Pubmed	A proteomics approach for the identification of cullin-9 (CUL9) related signaling pathways in induced pluripotent stem cell models.	PRPF8 SNRNP200	9.24e-04	24	65	2	33705438
Pubmed	USP45 and Spindly are part of the same complex implicated in cell migration.	PRPF8 CLSTN1 SNRNP200 RPL12	9.96e-04	235	65	4	30258100
Pubmed	Single Cell and Open Chromatin Analysis Reveals Molecular Origin of Epidermal Cells of the Skin.	BMP7 WNT10B	1.00e-03	25	65	2	30220568
Pubmed	Characterization of SARS-CoV-2 proteins reveals Orf6 pathogenicity, subcellular localization, host interactions and attenuation by Selinexor.	HUWE1 PRPF8 SNRNP200 TAB3 RPL12	1.01e-03	408	65	5	33766124
Interaction	FSAF1 interactions	RBM33 SMARCB1 PRPF8 SNRNP200 IQGAP1	1.31e-06	60	64	5	int:FSAF1
GeneFamily	Basic helix-loop-helix proteins	ARNT BHLHA15 ARNT2 HES4	1.21e-04	110	42	4	420
GeneFamily	Zinc fingers RANBP2-type \|RNA binding motif containing	TAB3 CAPN15	1.08e-03	21	42	2	89
GeneFamily	Cyclin dependent kinases	CDK17 CDK11B	1.65e-03	26	42	2	496
GeneFamily	Hyalectan proteoglycans\|V-set domain containing\|Sushi domain containing\|C-type lectin domain containing	DGCR2 ATRNL1	4.08e-03	41	42	2	1298
Coexpression	GSE3203_UNTREATED_VS_IFNB_TREATED_LN_BCELL_UP	HIVEP2 GPR22 BEND5 DMRTC2 GML CAPN15 TPCN1	6.49e-07	200	65	7	M6795
Coexpression	GSE2770_UNTREATED_VS_IL12_TREATED_ACT_CD4_TCELL_2H_UP	DGCR2 PPP1R12B CLSTN1 VPS13B SBNO2 IQGAP1	1.04e-05	200	65	6	M6090
ToppCell	droplet-Lung-18m-Hematologic-lymphocytic-CD8-positive,_alpha-beta_T_cell-CD8-positive,_alpha-beta_T_cell_l21\|18m / method, tissue, age, lineage, sublineage, cell ontologies, cell type and subtype	YJU2 CD4 TCHP PRPF8 MKS1	2.62e-06	149	65	5	65778f19599b4955c0a16f0121237656449431fb
ToppCell	COVID-19-kidney-Epi_(Mes)\|COVID-19 / Disease (COVID-19 only), tissue and cell type	BMP7 BHLHA15 ATRNL1 ARNT2 DNM1	6.24e-06	178	65	5	544379f5a6145429762258d426b876bb36c112f5
ToppCell	COVID-19-kidney-Epi_(Mes)\|kidney / Disease (COVID-19 only), tissue and cell type	BMP7 BHLHA15 ATRNL1 ARNT2 DNM1	6.42e-06	179	65	5	e7c9dc63f03d3f3746b51a7e3c8393089e2ceb7d
ToppCell	TCGA-Kidney-Primary_Tumor-Renal_Cell_Carcinoma-Kidney_Papillary_Renal_Cell_Carcinoma\|TCGA-Kidney / Sample_Type by Project: Shred V9	DRC7 CLCN2 MRPL58 DNM1 MKS1	7.53e-06	185	65	5	46f4f6f20b1e152922f6f2ba1244c56e48a49b79
ToppCell	Bronchial_Biopsy\|World / Tissue, Lineage and Cell class of Lung Cells from 10X	KIAA1671 BMP7 BEND5 PPP1R12B CLSTN1	1.05e-05	198	65	5	f5b7013045b61fc56894f80092f799770dde1c8f
ToppCell	(09)_Interm._secr.>cil.\|World / shred by cell type by condition	DRC7 CFAP91 RPGR DNAH6 CSPP1	1.10e-05	200	65	5	3305e14dba12e94da42f0414fdc7a2c8caf0a183
ToppCell	Posterior_cortex-Neuronal-Excitatory-eN1(Slc17a7)-eN1_1-Bcl6\|Posterior_cortex / BrainAtlas - Mouse McCarroll V32	DRC7 CLCN2 BEND5 DNAH6	5.85e-05	144	65	4	08005be9e3367f78ef27e125d9cce5ca53f4bd2d
ToppCell	Ciliated_cells-A-IPF_02\|World / lung cells shred on cell class, cell subclass, sample id	DRC7 CFAP91 CCDC81 DNAH6	7.04e-05	151	65	4	9d03ce73af15ef40c592d19b36aff46bebc14c40
ToppCell	Control-Epithelial_airway-Ciliated_cells\|Control / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2	DRC7 CFAP91 CCDC81 DNAH6	7.60e-05	154	65	4	7556a4b2b062da5ae7ec2bbb66e745e7662db628
ToppCell	Ciliated_cells-A-Donor_06\|World / lung cells shred on cell class, cell subclass, sample id	CFAP91 ATRNL1 SCN5A CCDC81	7.60e-05	154	65	4	3b938e23324f7edb56797b4a76fb96ff588142cf
ToppCell	Control-Epithelial_airway-Ciliated_cells-Ciliated\|Control / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2	DRC7 CFAP91 CCDC81 DNAH6	7.60e-05	154	65	4	4e3bc24043144143842627cacf6f90dda2228910
ToppCell	LPS-IL1RA+antiTNF-Epithelial_airway-Ciliated_cells\|LPS-IL1RA+antiTNF / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2	DRC7 CFAP91 CCDC81 DNAH6	7.79e-05	155	65	4	5f1e2195a6b831e1b636f5cc3a282ca423721822
ToppCell	LPS-IL1RA+antiTNF-Epithelial_airway-Ciliated_cells-Ciliated\|LPS-IL1RA+antiTNF / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2	DRC7 CFAP91 CCDC81 DNAH6	7.79e-05	155	65	4	0944429459f642a1bcc56edc1ec28aaecde3e2dc
ToppCell	renal_medulla_nuclei-CKD+DKD_normotensive-Epithelial-Renal_corpuscle_epithelial_cell-parietal_epithelial_cell\|CKD+DKD_normotensive / Celltypes from Cells and Nuclei per compartment and clinical group	BMP7 DNM1 FRMD5 CAPN15	8.60e-05	159	65	4	9f6607e395bcca9cb1c83199bdbbaaa62a93938d
ToppCell	renal_medulla_nuclei-CKD+DKD_normotensive-Epithelial-Renal_corpuscle_epithelial_cell-parietal_epithelial_cell-Parietal_Epithelial_Cell\|CKD+DKD_normotensive / Celltypes from Cells and Nuclei per compartment and clinical group	BMP7 DNM1 FRMD5 CAPN15	8.60e-05	159	65	4	c8b42ebc25ebcc450832096fbffaa5c5f5fe88e7
ToppCell	LPS-antiTNF-Stromal_mesenchymal-Fibroblasts-MatrixFB_->_Myofibroblast\|LPS-antiTNF / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2	BEND5 ATRNL1 DNM1 PABIR3	9.92e-05	165	65	4	15fd9d21dccfa80656a6fa3b72286a6a9252d403
ToppCell	lung-Ciliated_Epithelia\|lung / shred on tissue and cell subclass	CCDC81 RPGR DNAH6 CSPP1	1.04e-04	167	65	4	26cf1cfa58ee74794449a87eb19cd896e1ec8892
ToppCell	COVID-19-kidney-PEC\|COVID-19 / Disease (COVID-19 only), tissue and cell type	BMP7 ATRNL1 ARNT2 DNM1	1.06e-04	168	65	4	a086c306be430adf0632ba53e98cd8014d2de330
ToppCell	COVID-19-kidney-PEC\|kidney / Disease (COVID-19 only), tissue and cell type	BMP7 ATRNL1 ARNT2 DNM1	1.16e-04	172	65	4	36a96714a0eb6ac438648135336c9791881ddadb
ToppCell	facs-Marrow-B-cells-18m-Lymphocytic-early_pro_B_cell\|Marrow / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation	KIAA1671 DRC7 HIVEP2 WNT10B	1.22e-04	174	65	4	4cdf2eedc28d88d18241ee390092426fdf849e79
ToppCell	facs-Marrow-B-cells-18m-Lymphocytic-early_pro-B_cell\|Marrow / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation	KIAA1671 DRC7 HIVEP2 WNT10B	1.22e-04	174	65	4	268be5e7d2a18b866770b7cdb966c3958c7e6534
ToppCell	facs-Trachea-3m-Epithelial-airway_epithelial-tracheobronchial_ciliated_cell-ciliated_cell\|3m / method, tissue, age, lineage, sublineage, cell ontologies, cell type and subtype	DRC7 CFAP91 CCDC81 DNAH6	1.30e-04	177	65	4	3cfde67b93f3986312f5e74e42504214d966e7dc
ToppCell	facs-Trachea-3m-Epithelial-airway_epithelial-tracheobronchial_ciliated_cell\|3m / method, tissue, age, lineage, sublineage, cell ontologies, cell type and subtype	DRC7 CFAP91 CCDC81 DNAH6	1.30e-04	177	65	4	12a52a12a87a31e501ced611f46a90d172ca7e35
ToppCell	Fetal_29-31_weeks-Epithelial-ciliated_cell-D062\|Fetal_29-31_weeks / Lineage, Cell type, age group and donor	DRC7 CFAP91 CCDC81 DNAH6	1.33e-04	178	65	4	de5d50d7ca9ee9eb62f50c88a0c6d47f0694b2e6
ToppCell	facs-Lung-24m-Mesenchymal-fibroblast-adventitial_fibroblast-adventitial_fibroblast_l49\|24m / method, tissue, age, lineage, sublineage, cell ontologies, cell type and subtype	BMP7 CFAP91 WNT10B PNMA8B	1.39e-04	180	65	4	e9785ac2806103f725f5a5208495826354ec6e22
ToppCell	facs-Trachea-nan-3m-Epithelial-ciliated_columnar_cell_of_tracheobronchial_tree\|Trachea / Lung_Trachea - method, tissue, subtissue, age, lineage, cell ontology and free annotation	DRC7 CFAP91 CCDC81 DNAH6	1.39e-04	180	65	4	cf6e9f757afeb342c5023f6e6152a1b4d0d164b4
ToppCell	Fetal_29-31_weeks-Epithelial-ciliated_cell-D088\|Fetal_29-31_weeks / Lineage, Cell type, age group and donor	DRC7 CFAP91 CCDC81 DNAH6	1.42e-04	181	65	4	dfce05bd472f67e6e2bb60ebd6fd34f0a9aeeca6
ToppCell	Adult-Epithelial-ciliated_cell-D122\|Adult / Lineage, Cell type, age group and donor	DRC7 CFAP91 CCDC81 DNAH6	1.45e-04	182	65	4	7ded554a4b441e6496db673ba206c0d76ccad7d9
ToppCell	Control-Epithelial_cells-Airway_ciliated\|Control / group, cell type (main and fine annotations)	DRC7 CFAP91 CCDC81 DNAH6	1.45e-04	182	65	4	fb725d10d9ed25dfc6d5bb69cfef78513f7d3e8f
ToppCell	5'-Adult-LymphNode-Epithelial-epithelial_progenitor_cell\|Adult / Celltypes from developing, pediatric, Crohn's, & adult GI tract	ATRNL1 SMARCB1 MAGEE1 RPL12	1.45e-04	182	65	4	cf0a6f99b825eb75f95f376c16a504e2669820ac
ToppCell	5'-Adult-LymphNode-Epithelial-epithelial_progenitor_cell-TA\|Adult / Celltypes from developing, pediatric, Crohn's, & adult GI tract	ATRNL1 SMARCB1 MAGEE1 RPL12	1.45e-04	182	65	4	49e4b362f88d235ed12aabcabb54787c16e32cb7
ToppCell	Ciliated_cells-B-Donor_04\|World / lung cells shred on cell class, cell subclass, sample id	CFAP91 CCDC81 DNAH6 CSPP1	1.45e-04	182	65	4	e93968f800bfeb258e4e834fc8bf92d1cb72cd73
ToppCell	343B-Lymphocytic-CD4_T-cell-Treg_cell_1\|Lymphocytic / Donor, Lineage, Cell class and subclass (all cells)	YJU2 CD4 CLSTN1 TAB3	1.48e-04	183	65	4	807d64deaf4e50dccf6f831f88578a6d903c1421
ToppCell	E18.5-Epithelial-Epithelial_Airway-Ciliated/Deuterosomal-Ciliated\|E18.5 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif	DRC7 CFAP91 CCDC81 DNAH6	1.51e-04	184	65	4	797b6a6d6f6aafae98f75ca8bffe8263f8d3ff9b
ToppCell	Children_(3_yrs)-Epithelial-ciliated_cell-D139\|Children_(3_yrs) / Lineage, Cell type, age group and donor	DRC7 CFAP91 CCDC81 DNAH6	1.51e-04	184	65	4	5daff849625f2f41d56615569c0ed59cd733b34c
ToppCell	E18.5-Epithelial-Epithelial_Airway-Ciliated/Deuterosomal-Ciliated-Ciliated_mature\|E18.5 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif	DRC7 CFAP91 CCDC81 DNAH6	1.51e-04	184	65	4	77d5b60a20b277f589b18f7a131142a7ef2dac17
ToppCell	Adult-Epithelial-ciliated_cell-D175\|Adult / Lineage, Cell type, age group and donor	DRC7 CFAP91 CCDC81 DNAH6	1.54e-04	185	65	4	30f4980dee6cd5959655f8d74049f3bfb5312611
ToppCell	Ciliated_cells-B-IPF_02\|World / lung cells shred on cell class, cell subclass, sample id	DRC7 CFAP91 CCDC81 DNAH6	1.54e-04	185	65	4	4fc7113d3dadc716ec5a8e62b58543cc00ce5b16
ToppCell	Fetal_29-31_weeks-Epithelial-ciliated_cell-D150\|Fetal_29-31_weeks / Lineage, Cell type, age group and donor	DRC7 CFAP91 CCDC81 DNAH6	1.54e-04	185	65	4	3e39a3cb534dfe2301930f3e2f7e8cefb522c158
ToppCell	NS-moderate-d_07-13-Epithelial-Ciliated\|d_07-13 / Location, Severity, dps_group, Lineage and Cell class of Upper airway (combined)	DRC7 CFAP91 CCDC81 DNAH6	1.57e-04	186	65	4	85787ff207f109ec7e3c0f729ba9bda739c2fdc9
ToppCell	droplet-Lung-nan-18m-Epithelial-Ciliated_cell\|Lung / Lung_Trachea - method, tissue, subtissue, age, lineage, cell ontology and free annotation	DRC7 CFAP91 CCDC81 DNAH6	1.57e-04	186	65	4	740fd06bcd3b24e6ff2ecf8080f378afc3e95084
ToppCell	droplet-Lung-nan-18m-Epithelial-ciliated_columnar_cell_of_tracheobronchial_tree\|Lung / Lung_Trachea - method, tissue, subtissue, age, lineage, cell ontology and free annotation	DRC7 CFAP91 CCDC81 DNAH6	1.57e-04	186	65	4	5ab43a298d23238b34e898d11decf0ad81d1b14e
ToppCell	PND14-Epithelial-Epithelial_Airway\|PND14 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif	DRC7 CFAP91 CCDC81 DNAH6	1.60e-04	187	65	4	1399c703505211c510b3f14c7a2aa9930566c473
ToppCell	Ciliated-cil-2\|World / Class top	DRC7 CFAP91 CCDC81 DNAH6	1.60e-04	187	65	4	e2e58ba039b5355c03c3b448e750aa37b0ea6913
ToppCell	18-Distal-Epithelial-Multiciliated_cell\|Distal / Age, Tissue, Lineage and Cell class	DRC7 CFAP91 CCDC81 DNAH6	1.60e-04	187	65	4	8d7fa6b2950898e7f283401808378ba2a41b9651
ToppCell	facs-Lung-EPCAM-18m-Epithelial-Ciliated_cell\|Lung / Lung_Trachea - method, tissue, subtissue, age, lineage, cell ontology and free annotation	DRC7 CFAP91 CCDC81 DNAH6	1.60e-04	187	65	4	888856cde7a69ea2f14d590597e25b1af6383c51
ToppCell	tumor_Lung-Epithelial_cells-tS3\|Epithelial_cells / Location, Cell class and cell subclass	DRC7 CFAP91 DNAH6 CSPP1	1.60e-04	187	65	4	3cea677279e71fdb9879530dea10a5e6393beacd
ToppCell	Fetal_29-31_weeks-Epithelial-ciliated_cell\|Fetal_29-31_weeks / Lineage, Cell type, age group and donor	DRC7 CFAP91 CCDC81 DNAH6	1.60e-04	187	65	4	9e10ed56090d82589bc457788282f664b70ace4b
ToppCell	facs-Lung-EPCAM-18m-Epithelial-ciliated_columnar_cell_of_tracheobronchial_tree\|Lung / Lung_Trachea - method, tissue, subtissue, age, lineage, cell ontology and free annotation	DRC7 CFAP91 CCDC81 DNAH6	1.60e-04	187	65	4	051b8c07d7489ce7576f6c57ce7008767ef76869
ToppCell	Epithelial-ciliated_cell\|World / Lineage, Cell type, age group and donor	DRC7 CFAP91 CCDC81 DNAH6	1.64e-04	188	65	4	61a459f3fe57e5728efc72637ff2edc2d343492b
ToppCell	Children_(3_yrs)-Epithelial-ciliated_cell\|Children_(3_yrs) / Lineage, Cell type, age group and donor	DRC7 CFAP91 CCDC81 DNAH6	1.64e-04	188	65	4	2b6dfc88be9ded7b88da9fe78a9cd9f9b3af8af3
ToppCell	Ciliated\|World / Class top	DRC7 CFAP91 CCDC81 DNAH6	1.64e-04	188	65	4	cc9178361360b5800f96516ed6a65089c144b1ce
ToppCell	PND01-Epithelial-Epithelial_Airway-Ciliated/Deuterosomal-Ciliated-Ciliated_mature\|PND01 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif	DRC7 CFAP91 CCDC81 DNAH6	1.67e-04	189	65	4	b55de812043b670cbde810d7d42f45909b6d66ef
ToppCell	PND10-Epithelial-Epithelial_Airway-Ciliated/Deuterosomal-Ciliated-Ciliated_mature\|PND10 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif	DRC7 CFAP91 CCDC81 DNAH6	1.67e-04	189	65	4	02c6128a9ab5818e0881dcadafdad5f08b9a67cf
ToppCell	Children_(3_yrs)-Epithelial-ciliated_cell-D032\|Children_(3_yrs) / Lineage, Cell type, age group and donor	DRC7 CFAP91 CCDC81 DNAH6	1.67e-04	189	65	4	68a3cf7763d6f9b95d6d6524eff7a16042703f1d
ToppCell	PND10-Epithelial-Epithelial_Airway-Ciliated/Deuterosomal-Ciliated\|PND10 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif	DRC7 CFAP91 CCDC81 DNAH6	1.67e-04	189	65	4	164ea92ff6a1aa2ead1c9b8f64f99a9d65437232
ToppCell	PND10-Epithelial-Epithelial_Airway\|PND10 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif	DRC7 CFAP91 CCDC81 DNAH6	1.67e-04	189	65	4	407d8a59969d83f014600aae1a55092283a13970
ToppCell	PND10-Epithelial-Epithelial_Airway-Ciliated/Deuterosomal\|PND10 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif	DRC7 CFAP91 CCDC81 DNAH6	1.67e-04	189	65	4	a85099bd598a27ee64ee0664d051d89fa8d62fc9
ToppCell	PND01-Epithelial-Epithelial_Airway-Ciliated/Deuterosomal-Ciliated\|PND01 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif	DRC7 CFAP91 CCDC81 DNAH6	1.67e-04	189	65	4	4e83e49d1265ffe507fdb72924c77c4d1c73f0bd
ToppCell	Epithelial-D_(Ciliated)\|World / shred on cell class and cell subclass (v4)	DRC7 CFAP91 CCDC81 DNAH6	1.67e-04	189	65	4	0bf560b595c7a8450a46bc821b742b67965bd9f9
ToppCell	PND14-Epithelial-Epithelial_Airway-Ciliated/Deuterosomal\|PND14 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif	DRC7 CFAP91 CCDC81 DNAH6	1.71e-04	190	65	4	35248a8be476ea8d06d67c3d98a25be1f7c150b7
ToppCell	facs-Lung-18m-Epithelial-airway_epithelial-lung_ciliated_cell-ciliated_cell\|18m / method, tissue, age, lineage, sublineage, cell ontologies, cell type and subtype	DRC7 CFAP91 CCDC81 DNAH6	1.71e-04	190	65	4	9ffd18ef358f8e32c610ab6420f479067c8ba44b
ToppCell	facs-Lung-18m-Epithelial-airway_epithelial-lung_ciliated_cell\|18m / method, tissue, age, lineage, sublineage, cell ontologies, cell type and subtype	DRC7 CFAP91 CCDC81 DNAH6	1.71e-04	190	65	4	3ef39d61c98de4e5df946b995847aa65eba6a4b6
ToppCell	PND14-Epithelial-Epithelial_Airway-Ciliated/Deuterosomal-Ciliated-Ciliated_mature\|PND14 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif	DRC7 CFAP91 CCDC81 DNAH6	1.71e-04	190	65	4	5f5206f9e725070d865f4c891ff08bb750e58582
ToppCell	PND14-Epithelial-Epithelial_Airway-Ciliated/Deuterosomal-Ciliated\|PND14 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif	DRC7 CFAP91 CCDC81 DNAH6	1.71e-04	190	65	4	088e3f39a1e5e11354d6e7458e8e6a39f14936b3
ToppCell	PND03-Epithelial-Epithelial_Airway-Ciliated/Deuterosomal-Ciliated\|PND03 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif	DRC7 CFAP91 CCDC81 DNAH6	1.74e-04	191	65	4	bda8faf92495c8b362850c0aff4fc6fbdd9c563b
ToppCell	PND03-Epithelial-Epithelial_Airway-Ciliated/Deuterosomal-Ciliated-Ciliated_mature\|PND03 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif	DRC7 CFAP91 CCDC81 DNAH6	1.74e-04	191	65	4	6880fb348bb0915db9a5da4f3566ca9ff93ed258
ToppCell	PND03-Epithelial-Epithelial_Airway-Ciliated/Deuterosomal\|PND03 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif	DRC7 CFAP91 CCDC81 DNAH6	1.78e-04	192	65	4	b5cdc2dae3154b1e4ade88f841f38584402ffe33
ToppCell	PND03-Epithelial-Epithelial_Airway\|PND03 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif	DRC7 CFAP91 CCDC81 DNAH6	1.78e-04	192	65	4	2d8d5a38e205339eda9c8aca1ca9ba3dcbe5ae56
ToppCell	Control_saline-Epithelial_airway-airway_epithelial-Ciliated\|Control_saline / Treatment groups by lineage, cell group, cell type	DRC7 CFAP91 CCDC81 DNAH6	1.88e-04	195	65	4	60067b5359174f0d1a8b5748bfc0690762e9e740
ToppCell	Fetal_brain-organoid_Tanaka_cellReport-GW09-Macroglial-Glia_progenitor_cell\|GW09 / Sample Type, Dataset, Time_group, and Cell type.	RPGR DNAH6 CAPN15 TPCN1	1.92e-04	196	65	4	7be50b9156394dea44d7b8b476d4dd516abfafae
ToppCell	(05)_Ciliated\|World / shred by cell type and Timepoint	DRC7 CFAP91 CCDC81 DNAH6	1.96e-04	197	65	4	fee3cd16af8eea697cd64e8f64af505aaa2ac4b0
ToppCell	Tracheal-10x5prime-Epithelial-Epi_airway_ciliated-Deuterosomal\|10x5prime / Cell types per location group and 10X technology with lineage, and cell group designations	DRC7 CFAP91 CCDC81 DNAH6	1.96e-04	197	65	4	6e4a411ef823ce9e16f420e185e21fa19d13af34
ToppCell	3'-Parenchyma_lung-Epithelial-Airway_ciliated-ciliated_columnar_cell_of_tracheobronchial_tree-Multiciliated_(non-nasal)-Multiciliated_(non-nasal)_L.0.3.2.2\|3' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5	CFAP91 CCDC81 DNAH6 CSPP1	1.96e-04	197	65	4	74a2c6cb8fcfe53dd9a2b36492a16c58f38e51c9
ToppCell	Monocytes-NUPR1+_Monocytes\|Monocytes / Immune cells in Rheumatoid Arthritis Joint Synovial Tissues	RMDN3 DNM1 SNRNP200 TPCN1	1.96e-04	197	65	4	8a058c9d9285acd7cf2fb8e34f7602a86b5d6c89
ToppCell	control-Epithelial-Ciliated\|control / Severity, Lineage and Cell class of Nasopharyngeal (NS) Samples from Patients and Controls	CFAP91 CCDC81 DNAH6 CSPP1	1.96e-04	197	65	4	d4e963c1f82996371bf3d63578ee9fce8e00c5a8
ToppCell	control-Epithelial-Ciliated\|Epithelial / Severity, Lineage and Cell class of Nasopharyngeal (NS) Samples from Patients and Controls	CFAP91 CCDC81 DNAH6 CSPP1	1.96e-04	197	65	4	e453d085182364ca347cbcc9dc995c62c3353016
ToppCell	(5)_Dendritic_cell-(53)_Lymphoid_DC\|(5)_Dendritic_cell / shred on Cell_type and subtype	CFAP91 ARNT2 CCDC81 DNM1	2.00e-04	198	65	4	548da5fa86f9756c503ed77bcdde55bc4d1a2726
ToppCell	Bronchial-NucSeq-Epithelial-Epi_airway_ciliated-Ciliated\|NucSeq / Cell types per location group and 10X technology with lineage, and cell group designations	DRC7 CFAP91 CCDC81 DNAH6	2.04e-04	199	65	4	542ec45c931b40738df1f3777b00c83be33a514a
ToppCell	Bronchial-NucSeq-Epithelial-Epi_airway_ciliated\|NucSeq / Cell types per location group and 10X technology with lineage, and cell group designations	DRC7 CFAP91 CCDC81 DNAH6	2.04e-04	199	65	4	2498237b9e895ca4826a3378d9d40989968df72b
ToppCell	10x_3'_v3-spleen_(10x_3'_v3)-lymphocytic-B_lymphocytic-memory_B_cell\|spleen_(10x_3'_v3) / Per Platform+tissue_group, by lineage_subgroup, cell_group, cell_type	BEND5 SMARCB1 HES4 RPL12	2.04e-04	199	65	4	38747e07853f60d11eda9371cf5e6493e21a9cc3
ToppCell	LPS_IL1RA_TNF-Epithelial_airway-airway_epithelial-Ciliated\|LPS_IL1RA_TNF / Treatment groups by lineage, cell group, cell type	DRC7 CFAP91 CCDC81 DNAH6	2.08e-04	200	65	4	96701a4d57753f5ec0dd5c7550054bbcc946bc5f
ToppCell	Fetal_brain-organoid_Tanaka_cellReport-GW10-Macroglial\|GW10 / Sample Type, Dataset, Time_group, and Cell type.	BMP7 RPGR FRMD5 TPCN1	2.08e-04	200	65	4	ef222dc4a205d670172dae74990bdb952ac92e5b
ToppCell	Fetal_brain-organoid_Tanaka_cellReport-GW10-Macroglial-Astrocyte\|GW10 / Sample Type, Dataset, Time_group, and Cell type.	BMP7 RPGR FRMD5 TPCN1	2.08e-04	200	65	4	98a994692440cb4f505b050276f0c8022c814a21
ToppCell	LPS_IL1RA-Epithelial_airway-airway_epithelial-Ciliated\|LPS_IL1RA / Treatment groups by lineage, cell group, cell type	DRC7 CFAP91 CCDC81 DNAH6	2.08e-04	200	65	4	4992dbf0514d674017315dbd20d91dfec0c608e9
ToppCell	droplet-Large_Intestine-COLON_-_"PROM_Tm"-30m-Epithelial-Lgr5-_amplifying_undifferentiated_cell\|Large_Intestine / Large_Intestine_Pancreas_Liver - method, tissue, subtissue, age, lineage, cell ontology and free annotation	AGO4 DNM1 ANGPTL8	3.51e-04	94	65	3	2fb80a08f823295fa4c3e6494bf020e5b4052f0f
ToppCell	droplet-Large_Intestine-COLON_-_"PROM_Tm"-30m-Epithelial-epithelial_cell_of_large_intestine\|Large_Intestine / Large_Intestine_Pancreas_Liver - method, tissue, subtissue, age, lineage, cell ontology and free annotation	AGO4 DNM1 ANGPTL8	3.51e-04	94	65	3	d25f096626af873f724a8cd6454ed56e33fd9854
Disease	retinitis pigmentosa (is_implicated_in)	RPGR PRPF8 SNRNP200	8.90e-05	41	62	3	DOID:10584 (is_implicated_in)
Disease	Meckel-Gruber syndrome	CSPP1 MKS1	4.48e-04	15	62	2	C0265215
Disease	Retinitis pigmentosa	RPGR PRPF8 SNRNP200	5.15e-04	74	62	3	cv:C0035334
Disease	Meckel syndrome type 1	CSPP1 MKS1	6.50e-04	18	62	2	C3714506
Disease	Joubert syndrome 1	CSPP1 MKS1	8.89e-04	21	62	2	C4551568
Disease	Disorder of eye	RPGR PRPF8 SNRNP200 MKS1	1.04e-03	212	62	4	C0015397
Disease	Retinitis Pigmentosa	RPGR PRPF8 SNRNP200	1.38e-03	104	62	3	C0035334
Disease	retinitis pigmentosa (implicated_via_orthology)	PRPF8 SNRNP200	1.47e-03	27	62	2	DOID:10584 (implicated_via_orthology)
Disease	Familial aplasia of the vermis	CSPP1 MKS1	1.82e-03	30	62	2	C0431399

Protein segments in the cluster

Peptide	Gene	Start	Entry
EMRHLQQELERTRRQ	BEND5	196	Q7L4P6
RENHSEIERRRRNKM	ARNT	91	P27540
TEAVMRRHCRTLRQR	C20orf204	131	A0A1B0GTL2
RRLESNERERQRMHK	BHLHA15	76	Q7RTS1
QRQRREMVAQQHRLR	ANGPTL8	171	Q6UXH0
QKRREMAREHSRRER	CDK11B	151	P21127
MAREHSRRERDRLEQ	CDK11B	156	P21127
RIRAAHRRTMRDQDT	CLSTN1	881	O94985
HMRTDRRLQRLLQTQ	ABCD4	246	O14678
RPRRVNREVVDTMVR	AGO4	56	Q9HCK5
FIHRRLRSQERREMQ	BMP7	41	P18075
IHAFVMLAERQRRVR	CFAP91	596	Q7Z4T9
ENHSEIERRRRNKMT	ARNT2	66	Q9HBZ2
QEAEHQRAMQRRAIR	IQGAP1	1416	P46940
QRRESTERGRMKDHR	RBM33	291	Q96EV2
DMLRIRTNRTTFRNR	PABIR3	46	Q6P4D5
LRRRESMHVEQRRQT	CAPN15	451	O75808
RRMLRRHTVEDAVVS	ANKRD27	1016	Q96NW4
MRAAVTREQRRHLLE	DUOX1	751	Q9NRD9
MSLVSQNSRRRRRRV	MAGEE1	1	Q9HCI5
GLSIMHEARERRREQ	KIAA1671	1421	Q9BY89
RLREEMERIVTTHIR	DNM1	451	Q05193
MERIVTTHIREREGR	DNM1	456	Q05193
SVTMRNVRRVRIRHD	LOXHD1	611	Q8IVV2
RDRSHREEMEVRVSQ	CBFB	156	Q13951
DRRLSRVYTNDRMHR	CSPP1	341	Q1MSJ5
RVRNEERMRRLNEFH	CSPP1	1166	Q1MSJ5
EETTEARTHNLRRRM	KDM5B	246	Q9UGL1
VCLRNRIHRRISMED	CDK17	126	Q00537
LRREQEARQRQLMHE	HUWE1	3096	Q7Z6Z7
RTRRRAVHISIMEGL	FRMD5	366	Q7Z6J6
IEHVSRIARMIRQER	DNAH6	2426	Q9C0G6
ERRRVMAAQVALRRQ	DMRTC2	76	Q8IXT2
QRRDLQMLQRTQREH	CCDC81	551	Q6ZN84
HRIRIENMNRERLRQ	MRPL58	176	Q14197
RCRHRRRQAERMSQI	CD4	421	P01730
SRRREQLLRERQQMA	ATRNL1	1261	Q5VV63
AMFRIRILEQRLNRH	DRC7	831	Q8IY82
FMVHRLRQRRRERIE	DGCR2	366	P98153
LEMTVRHLRSLRRVQ	HES4	81	Q9HCC6
HRERRERQKRVFRMS	GPR22	301	Q99680
DRRAKNQRRRVHMTL	SBNO1	951	A3KN83
HIRRCMTISIRINSR	GML	51	Q99445
VLQRTLSARMRRRER	RPGR	401	Q92834
VRCHMEENQRVARRR	RMDN3	126	Q96TC7
EHDLMQRRLRRVSCT	TAB3	551	Q8N5C8
QRIHDQIVRIRGTRM	PKDREJ	1671	Q9NTG1
RAQDTRVLRQMRRLL	PNMA8B	96	Q9ULN7
MVIQRAFRRHLLQRS	SCN5A	1906	Q14524
RDQDRNTRRMRRLAN	SMARCB1	366	Q12824
DRRVQNQRRRVHMTL	SBNO2	811	Q9Y2G9
LQRMFDNERRTVSRR	RNF169	676	Q8NCN4
SRVRERSEREQRMQA	SAFB	621	Q15424
SPARRRQHMQERRAT	CLCN2	641	P51788
RVDDESMQRFHNRVR	PRPF8	1231	Q6P2Q9
MERARDRLHLRRTTE	SNURF	1	Q9Y675
MRDRIEQVRRSISRL	SPATA19	136	Q7Z5L4
AFRRARRRMQEARES	MKS1	531	Q9NXB0
NIARQMRHRSLAREL	RPL12	111	P30050
MIKHRQVQRRGRRSQ	DNTTIP1	41	Q9H147
RLSMNLQERRIREQH	TCHP	106	Q9BT92
AMLRQHRLSEEERRR	YJU2	171	Q9BW85
LVRQMSHVRVTRALR	TPCN1	191	Q9ULQ1
RSRRERVRQSRMDTD	SNRNP200	376	O75643
NMASSIRRHQERRAI	VPS13B	1671	Q7Z7G8
RDIQARMRIHNNRVG	WNT10B	221	O00744
LRREMSQRDVSPRRH	HIVEP2	2096	P31629
RAESARMRRAEQLRR	PPP1R12B	11	O60237