Cluster composition

Functions

Category	Name	IntersectionWithQuery	PValue	GenesInTerm	GenesInQuery	GenesInTermInQuery	ID
GeneOntologyMolecularFunction	RNA polymerase II C-terminal domain phosphoserine binding	LEO1 SCAF8	2.33e-05	5	31	2	GO:1990269
GeneOntologyMolecularFunction	RNA polymerase II C-terminal domain binding	LEO1 SCAF8	1.27e-04	11	31	2	GO:0099122
GeneOntologyMolecularFunction	phosphoserine residue binding	LEO1 SCAF8	1.52e-04	12	31	2	GO:0050815
GeneOntologyMolecularFunction	voltage-gated sodium channel activity	CACNA1I SCN11A	7.41e-04	26	31	2	GO:0005248
GeneOntologyMolecularFunction	RNA polymerase II complex binding	LEO1 SCAF8	1.67e-03	39	31	2	GO:0000993
GeneOntologyMolecularFunction	RNA polymerase core enzyme binding	LEO1 SCAF8	2.22e-03	45	31	2	GO:0043175
GeneOntologyMolecularFunction	sodium ion transmembrane transporter activity	CACNA1I SCN11A SLC24A4	2.33e-03	171	31	3	GO:0015081
GeneOntologyMolecularFunction	ion channel inhibitor activity	WNK1 RSC1A1	2.52e-03	48	31	2	GO:0008200
GeneOntologyMolecularFunction	channel inhibitor activity	WNK1 RSC1A1	2.73e-03	50	31	2	GO:0016248
GeneOntologyMolecularFunction	transporter inhibitor activity	WNK1 RSC1A1	2.84e-03	51	31	2	GO:0141110
GeneOntologyMolecularFunction	sodium channel activity	CACNA1I SCN11A	2.95e-03	52	31	2	GO:0005272
GeneOntologyBiologicalProcess	regulation of termination of RNA polymerase II transcription	WNK1 SCAF8	1.31e-05	4	31	2	GO:1904594
GeneOntologyBiologicalProcess	response to high light intensity	SCN11A SLC24A4	1.31e-05	4	31	2	GO:0009644
GeneOntologyBiologicalProcess	regulation of termination of DNA-templated transcription	WNK1 SCAF8	3.27e-05	6	31	2	GO:0031554
GeneOntologyCellularComponent	cone photoreceptor outer segment	PCARE SLC24A4	1.40e-04	11	34	2	GO:0120199
GeneOntologyCellularComponent	voltage-gated sodium channel complex	CACNA1I SCN11A	3.44e-04	17	34	2	GO:0001518
Domain	DUF1220	NBPF4 NBPF6	9.53e-05	9	31	2	SM01148
Domain	NBPF	NBPF4 NBPF6	1.45e-04	11	31	2	PS51316
Domain	DUF1220	NBPF4 NBPF6	1.45e-04	11	31	2	PF06758
Domain	NBPF_dom	NBPF4 NBPF6	1.45e-04	11	31	2	IPR010630
Domain	PA	RNF13 RNF133	4.48e-04	19	31	2	PF02225
Domain	PA_domain	RNF13 RNF133	4.48e-04	19	31	2	IPR003137
Domain	zf-RING_2	RNF13 RNF133	3.36e-03	52	31	2	PF13639
Domain	Channel_four-helix_dom	CACNA1I SCN11A	4.02e-03	57	31	2	IPR027359
Domain	-	CACNA1I SCN11A	4.02e-03	57	31	2	1.20.120.350
Domain	Ion_trans_dom	CACNA1I SCN11A	1.53e-02	114	31	2	IPR005821
Domain	Ion_trans	CACNA1I SCN11A	1.53e-02	114	31	2	PF00520
Pubmed	A novel gene family NBPF: intricate structure generated by gene duplications during primate evolution.	NBPF4 NBPF6 NBPF5P	1.12e-06	21	34	3	16079250
Pubmed	Oct4 links multiple epigenetic pathways to the pluripotency network.	SALL4 LEO1 SCAF8 RAD21	4.56e-05	203	34	4	22083510
Pubmed	The alternative Ctf18-Dcc1-Ctf8-replication factor C complex required for sister chromatid cohesion loads proliferating cell nuclear antigen onto DNA.	HSPA4 RAD21	6.08e-05	12	34	2	12930902
Pubmed	USP13 interacts with cohesin and regulates its ubiquitination in human cells.	HSPA4 RAD21	6.08e-05	12	34	2	33334891
Pubmed	Bmx is a downstream Rap1 effector in VEGF-induced endothelial cell activation.	TNFRSF10C HSPA4	7.19e-05	13	34	2	15207703
Pubmed	Protein trafficking and anchoring complexes revealed by proteomic analysis of inward rectifier potassium channel (Kir2.x)-associated proteins.	APBA1 DTNA	1.57e-04	19	34	2	15024025
Pubmed	RAD21 cooperates with pluripotency transcription factors in the maintenance of embryonic stem cell identity.	SALL4 HSPA4 RAD21	3.94e-04	146	34	3	21589869
Pubmed	Phenotypic and Interaction Profiling of the Human Phosphatases Identifies Diverse Mitotic Regulators.	GOLIM4 LEO1 MAPRE2 CDC14B DTNA VPS13A	4.84e-04	1049	34	6	27880917
Pubmed	Sexually dimorphic gene expression in the developing mouse gonad.	KDM5D DTNA	5.41e-04	35	34	2	12617826
Cytoband	1p13.3	NBPF4 NBPF6 NBPF5P	1.88e-05	69	34	3	1p13.3
Cytoband	Ensembl 112 genes in cytogenetic band chr1p13	NBPF4 NBPF6 NBPF5P	5.16e-04	211	34	3	chr1p13
Cytoband	Ensembl 112 genes in cytogenetic band chr18q12	MAPRE2 DTNA	2.72e-03	104	34	2	chr18q12
Cytoband	Ensembl 112 genes in cytogenetic band chr9q21	APBA1 VPS13A	9.57e-03	199	34	2	chr9q21
GeneFamily	Neuroblastoma breakpoint family	NBPF4 NBPF6 NBPF5P	2.73e-06	23	22	3	662
GeneFamily	Endogenous ligands\|Minor histocompatibility antigens	KDM5D WNK1	1.74e-03	51	22	2	870
ToppCell	facs-Thymus-Thymus_Epithelium-18m-Lymphocytic\|Thymus / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation	SALL4 ZAN MYO7B NRK	1.14e-05	184	34	4	ea7a7e2bac46d4d2c31a5d576b38a032b5335062
ToppCell	facs-Thymus-Thymus_Epithelium-18m-Lymphocytic-thymocyte\|Thymus / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation	SALL4 ZAN MYO7B NRK	1.14e-05	184	34	4	2cbed6462fea2622871bb7e49b0df3d984239281
ToppCell	facs-Thymus-Thymus_Epithelium-18m-Lymphocytic-proliferating_thymocyte;_DN_to_DP_transition,_dividing_(some_are_Cd8+/_Cd4+,_some_undergoing_VDJ_recombination)\|Thymus / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation	SALL4 ZAN MYO7B NRK	1.14e-05	184	34	4	2b19a8c5f823e00812908b23e66bb4e563278aff
ToppCell	Biopsy_Control_(H.)-Epithelial-KRT5-/KRT17+\|Biopsy_Control_(H.) / Sample group, Lineage and Cell type	BNIP5 TNFRSF10C RNF133 NRK	1.55e-05	199	34	4	3b1f56c8b40bb36922a31d2d440a8c468a8aa3f1
Disease	intelligence, self reported educational attainment	APBA1 CACNA1I CDC14B	2.52e-04	117	31	3	EFO_0004337, EFO_0004784
Disease	S-warfarin to R-warfarin ratio measurement	GOLIM4 SLC24A4	4.49e-03	95	31	2	EFO_0803331
Disease	Adenocarcinoma of large intestine	NRK RAD21	4.58e-03	96	31	2	C1319315

Protein segments in the cluster

Peptide	Gene	Start	Entry
SINGVENQDQQEPEP	CDC14B	401	O60729
HENIENGNVPVENPE	SLC24A4	371	Q8NFF2
VENPEDPQQNQEQQP	SLC24A4	381	Q8NFF2
ALNIPPENQNDHEEE	NBPF4	256	Q96M43
ENPEVPREDQQQQHQ	RAD21	421	O60216
QQSNEQTDPEPEENE	OGFOD1	411	Q8N543
QPVDENGLPQDQQEE	LEO1	336	Q8WVC0
QEEPHVEEQQQQTPA	HSPA4	526	P34932
EVPEAHQLQQQVEQA	KDM5D	901	Q9BY66
DPAEQQNVTQVAHSP	GOLIM4	251	O00461
QETVEPPQTLHQQQQ	DCP1B	241	Q8IZD4
QDAEEQQGEEQPQVQ	BNIP5	401	P0C671
QQGEEQPQVQQEEVG	BNIP5	406	P0C671
DAVAVDQQPVTNHNP	CACNA1I	1391	Q9P0X4
HPEVEEEQQQPPQQQ	APBA1	31	Q02410
EAEEQAHEQQPPQQE	MAPRE2	311	Q15555
EHEQASQPTPEKAQQ	DTNA	496	Q9Y4J8
VNEELPHNCIEQPQQ	HELQ	231	Q8TDG4
QVSDPQQHEEPGNEQ	RSC1A1	161	Q92681
EQQQPQKATPQDSQE	SCAF8	321	Q9UPN6
EDQGEQQPQQQTPEF	SALL4	16	Q9UJQ4
HIQDKSQPEAQPQQE	PCARE	1271	A6NGG8
PEQQQRHNQVPEQEL	NRK	536	Q7Z2Y5
EQNQAPEQPEVQEQA	NRK	551	Q7Z2Y5
QDHTSPNENDQVTPQ	HSFX1	241	Q9UBD0
HVEENPTSQNNDIQP	RNF133	351	Q8WVZ7
ALNIPPENQNDHEEE	NBPF5P	256	Q86XG9
ALNIPPENQNDHEEE	NBPF6	256	Q5VWK0
NEINEHDVVVQLQPN	RNF13	356	O43567
ENVISQPNEFEHTPQ	ZNF48	31	Q96MX3
NTNEQQPDVQPETLE	VPS13A	441	Q96RL7
QEEVPQQTVAPQQQR	TNFRSF10C	31	O14798
GQHQPQQEEEESKPE	PRPF40B	251	Q6NWY9
EDNAQRITQPEPEQQ	SCN11A	931	Q9UI33
QVEPEEPEADQHQQL	WNK1	626	Q9H4A3
EPEADQHQQLQYQQP	WNK1	631	Q9H4A3
LVDEQQIPAEQQENP	ZAN	2111	Q9Y493
KQPPHQVEVEAAEQN	MYO7B	1781	Q6PIF6