Cluster composition

Functions

CategoryNameIntersectionWithQueryPValueGenesInTermGenesInQueryGenesInTermInQueryID
GeneOntologyBiologicalProcessregulation of plasma membrane bounded cell projection organization

ATMIN CDKL5 NF1 MAPT WASHC5 PUM2 ROBO1 DMD ODF2 OCLN CDC20 PREX1

8.14e-068466312GO:0120035
GeneOntologyBiologicalProcessregulation of cell projection organization

ATMIN CDKL5 NF1 MAPT WASHC5 PUM2 ROBO1 DMD ODF2 OCLN CDC20 PREX1

9.94e-068636312GO:0031344
GeneOntologyBiologicalProcesspositive regulation of cell projection organization

ATMIN CDKL5 NF1 MAPT WASHC5 PUM2 ROBO1 DMD OCLN

1.81e-05494639GO:0031346
GeneOntologyBiologicalProcessregulation of neuron projection development

CDKL5 NF1 MAPT WASHC5 PUM2 ROBO1 DMD CDC20 PREX1

9.53e-05612639GO:0010975
GeneOntologyBiologicalProcessprotein localization to nucleus

CDKL5 RANBP2 NF1 LATS2 TOPORS TRIM29 NUP153

1.15e-04362637GO:0034504
GeneOntologyBiologicalProcessorganelle assembly

ATMIN CDKL5 NCOR1 VIPAS39 ALMS1 MAPT WASHC5 FAM161A PUM2 CFAP61 ODF2 CDC20

1.47e-0411386312GO:0070925
GeneOntologyCellularComponentspindle pole

LATS2 ALMS1 TTC28 FAM161A ODF2 CDC20 TOPORS

3.76e-06205667GO:0000922
GeneOntologyCellularComponentciliary basal body

CDKL5 ALMS1 FAM161A ODF2 TOPORS USH2A

3.48e-05195666GO:0036064
GeneOntologyCellularComponentspindle

NCOR1 LATS2 ALMS1 TTC28 FAM161A ODF2 CDC20 TOPORS

1.14e-04471668GO:0005819
GeneOntologyCellularComponentmicrotubule organizing center

CDKL5 LATS2 ALMS1 TTC28 FAM161A DTL ODF2 CDC20 TOPORS USH2A RBM39

1.31e-049196611GO:0005815
GeneOntologyCellularComponentsomatodendritic compartment

CDKL5 NF1 SHANK2 MAPT WASHC5 DTNB PUM2 ROBO1 PAWR DMD USH2A PREX1

4.12e-0412286612GO:0036477
GeneOntologyCellularComponentaxon

CDKL5 NF1 DST SHANK2 MAPT ROBO1 PAWR DMD USH2A PREX1

4.55e-048916610GO:0030424
GeneOntologyCellularComponentphotoreceptor connecting cilium

FAM161A TOPORS USH2A

4.70e-0448663GO:0032391
GeneOntologyCellularComponentpostsynaptic density

CDKL5 DST SHANK2 MAPT DTNB RIMS1 DMD

5.40e-04451667GO:0014069
GeneOntologyCellularComponentcentrosome

CDKL5 LATS2 ALMS1 TTC28 FAM161A DTL ODF2 CDC20 RBM39

6.73e-04770669GO:0005813
GeneOntologyCellularComponentasymmetric synapse

CDKL5 DST SHANK2 MAPT DTNB RIMS1 DMD

7.51e-04477667GO:0032279
GeneOntologyCellularComponentannulate lamellae

RANBP2 NUP153

8.72e-0414662GO:0005642
GeneOntologyCellularComponentneurofilament

SHANK2 DMD

8.72e-0414662GO:0005883
GeneOntologyCellularComponentphotoreceptor cell cilium

SHANK2 FAM161A TOPORS USH2A

9.80e-04139664GO:0097733
GeneOntologyCellularComponentcell leading edge

CDKL5 DST MAPT ROBO1 DMD OCLN USH2A

9.89e-04500667GO:0031252
GeneOntologyCellularComponentpostsynaptic specialization

CDKL5 DST SHANK2 MAPT DTNB RIMS1 DMD

1.02e-03503667GO:0099572
GeneOntologyCellularComponentneuron to neuron synapse

CDKL5 DST SHANK2 MAPT DTNB RIMS1 DMD

1.28e-03523667GO:0098984
GeneOntologyCellularComponent9+0 non-motile cilium

SHANK2 FAM161A TOPORS USH2A

1.40e-03153664GO:0097731
GeneOntologyCellularComponentnuclear pore nuclear basket

RANBP2 NUP153

1.45e-0318662GO:0044615
GeneOntologyCellularComponentnuclear inclusion body

RANBP2 NUP153

1.80e-0320662GO:0042405
GeneOntologyCellularComponentnuclear envelope

RANBP2 DST DTL PUM2 SPDYA NUDT9 NUP153

1.89e-03560667GO:0005635
GeneOntologyCellularComponentphotoreceptor inner segment

SHANK2 FAM161A USH2A

1.93e-0378663GO:0001917
GeneOntologyCellularComponentcilium

CDKL5 SHANK2 ALMS1 MAPT FAM161A CFAP61 ODF2 TOPORS USH2A

1.97e-03898669GO:0005929
GeneOntologyCellularComponentaxolemma

MAPT ROBO1

1.98e-0321662GO:0030673
GeneOntologyCellularComponentnuclear body

ATMIN RBM27 MAPT TLE2 SRSF11 NUDT9 TOPORS OGG1 RBM39

2.04e-03903669GO:0016604
GeneOntologyCellularComponentcentriole

ALMS1 FAM161A ODF2 TOPORS

2.14e-03172664GO:0005814
GeneOntologyCellularComponentciliary transition zone

FAM161A TOPORS USH2A

2.15e-0381663GO:0035869
GeneOntologyCellularComponentcostamere

DMD AHNAK2

2.18e-0322662GO:0043034
GeneOntologyCellularComponentneuron projection membrane

MAPT ROBO1 USH2A

2.23e-0382663GO:0032589
GeneOntologyCellularComponentcell projection membrane

CDKL5 SHANK2 MAPT ROBO1 DMD USH2A

2.37e-03431666GO:0031253
GeneOntologyCellularComponentnuclear speck

RBM27 MAPT SRSF11 TOPORS OGG1 RBM39

2.37e-03431666GO:0016607
GeneOntologyCellularComponentperinuclear region of cytoplasm

CDKL5 NCOR1 RANBP2 DST PPP1R13B PUM2 DMD CDC20 PREX1

2.57e-03934669GO:0048471
GeneOntologyCellularComponentinclusion body

RANBP2 MAPT NUP153

2.90e-0390663GO:0016234
GeneOntologyCellularComponentnon-motile cilium

SHANK2 FAM161A TOPORS USH2A

3.43e-03196664GO:0097730
GeneOntologyCellularComponentinhibitory synapse

DTNB RIMS1

4.30e-0331662GO:0060077
GeneOntologyCellularComponentleading edge membrane

CDKL5 MAPT ROBO1 USH2A

4.39e-03210664GO:0031256
GeneOntologyCellularComponentneuronal cell body

SHANK2 MAPT WASHC5 PUM2 ROBO1 PAWR DMD USH2A

4.64e-03835668GO:0043025
GeneOntologyCellularComponentnuclear membrane

RANBP2 DTL PUM2 NUDT9 NUP153

4.90e-03349665GO:0031965
GeneOntologyCellularComponentneuron projection cytoplasm

CDKL5 DST MAPT

5.10e-03110663GO:0120111
GeneOntologyCellularComponentdendrite

CDKL5 NF1 SHANK2 MAPT DTNB PUM2 ROBO1 PREX1

5.46e-03858668GO:0030425
GeneOntologyCellularComponentdendritic tree

CDKL5 NF1 SHANK2 MAPT DTNB PUM2 ROBO1 PREX1

5.53e-03860668GO:0097447
GeneOntologyCellularComponentcytoplasmic region

CDKL5 DST MAPT RIMS1 CFAP61

5.58e-03360665GO:0099568
GeneOntologyCellularComponentgrowth cone

CDKL5 SHANK2 MAPT PREX1

7.52e-03245664GO:0030426
MousePhenomicrogliosis

WWOX MAPT FAM161A OGG1

3.73e-0553504MP:0008918
MousePhenoincreased respiratory system tumor incidence

RANBP2 NF1 WWOX ROBO1 OGG1

3.85e-05107505MP:0010298
MousePhenoincreased lung tumor incidence

RANBP2 NF1 WWOX ROBO1 OGG1

3.85e-05107505MP:0008014
MousePhenoimpaired coordination

CDKL5 NF1 DST WWOX SHANK2 MAPT IGDCC3 DMD MYO15A

4.26e-05478509MP:0001405
MousePhenodelayed muscle development

NF1 LATS2

7.49e-054502MP:0000736
MousePhenoabnormal chromosome morphology

RANBP2 LATS2 SPDYA CDC20 TOPORS

8.41e-05126505MP:0003702
MousePhenoincreased lung carcinoma incidence

RANBP2 NF1 ROBO1 OGG1

1.70e-0478504MP:0008714
MousePhenoneurodegeneration

DST WWOX ALMS1 MAPT FAM161A MYO15A USH2A OGG1

2.32e-04468508MP:0002229
MousePhenoabnormal chromosome number

RANBP2 LATS2 CDC20 TOPORS

2.48e-0486504MP:0004023
MousePhenoabnormal RR interval

ZNF280D SFSWAP FAM161A TOPORS RBM20

2.58e-04160505MP:0010504
MousePhenoabnormal microglial cell morphology

WWOX MAPT FAM161A OGG1

2.59e-0487504MP:0000136
MousePhenoabnormal Sertoli cell barrier morphology

NF1 MEX3B

2.60e-047502MP:0020355
MousePhenoenhanced long-term object recognition memory

NCOR1 MAPT

2.60e-047502MP:0014368
MousePhenogliosis

DST WWOX MAPT FAM161A OGG1

3.51e-04171505MP:0002183
MousePhenoabnormal social investigation

CDKL5 WWOX SHANK2 SH3RF2 PREX1

3.51e-04171505MP:0001360
MousePhenoseminiferous tubule degeneration

NF1 WWOX ALMS1 PUM2

3.78e-0496504MP:0001154
MousePhenoneuron degeneration

DST WWOX ALMS1 MAPT FAM161A MYO15A USH2A

4.49e-04391507MP:0003224
MousePhenoabnormal cell nucleus morphology

RANBP2 LATS2 SPDYA CDC20 TOPORS

4.91e-04184505MP:0003111
DomainPDZ

SHANK2 RIMS1 SIPA1L2 PREX1 PDZRN3 AHNAK2

1.50e-05148676SM00228
Domain-

SHANK2 RIMS1 SIPA1L2 PREX1 PDZRN3 AHNAK2

1.62e-051506762.30.42.10
DomainPDZ

SHANK2 RIMS1 SIPA1L2 PREX1 PDZRN3 AHNAK2

1.68e-05151676PS50106
DomainPDZ

SHANK2 RIMS1 SIPA1L2 PREX1 PDZRN3 AHNAK2

1.74e-05152676IPR001478
DomainSH3

DST SHANK2 SH3RF2 SRGAP1 PPP1R13B MYO15A

1.24e-04216676PS50002
DomainSH3_domain

DST SHANK2 SH3RF2 SRGAP1 PPP1R13B MYO15A

1.37e-04220676IPR001452
DomainPDZ

SHANK2 RIMS1 SIPA1L2 PDZRN3 AHNAK2

1.51e-04141675PF00595
DomainEF-hand_dom_typ1

DTNB DMD

1.88e-046672IPR015153
DomainEF-hand_dom_typ2

DTNB DMD

1.88e-046672IPR015154
DomainEF-hand_2

DTNB DMD

1.88e-046672PF09068
DomainEF-hand_3

DTNB DMD

1.88e-046672PF09069
DomainSH3

SHANK2 SH3RF2 SRGAP1 PPP1R13B MYO15A

1.07e-03216675SM00326
DomainZZ

DTNB DMD

1.87e-0318672PF00569
DomainZF_ZZ_2

DTNB DMD

1.87e-0318672PS50135
DomainZF_ZZ_1

DTNB DMD

1.87e-0318672PS01357
DomainZnf_ZZ

DTNB DMD

2.08e-0319672IPR000433
DomainZnF_ZZ

DTNB DMD

2.08e-0319672SM00291
Domainzf-RanBP

RANBP2 NUP153

2.80e-0322672PF00641
DomainSH3_1

DST SH3RF2 SRGAP1 PPP1R13B

2.86e-03164674PF00018
DomainActinin_actin-bd_CS

DST DMD

3.06e-0323672IPR001589
DomainZnF_RBZ

RANBP2 NUP153

3.06e-0323672SM00547
DomainSpectrin

DST DMD

3.06e-0323672PF00435
DomainZF_RANBP2_2

RANBP2 NUP153

3.06e-0323672PS50199
DomainACTININ_2

DST DMD

3.06e-0323672PS00020
DomainACTININ_1

DST DMD

3.06e-0323672PS00019
DomainZF_RANBP2_1

RANBP2 NUP153

3.33e-0324672PS01358
DomainZnf_C3HC4_RING-type

MARCHF10 SH3RF2 TOPORS PDZRN3

3.39e-03172674IPR018957
DomainZnf_RanBP2

RANBP2 NUP153

3.61e-0325672IPR001876
DomainSH3_2

SHANK2 SH3RF2 MYO15A

3.65e-0386673IPR011511
DomainSH3_2

SHANK2 SH3RF2 MYO15A

3.65e-0386673PF07653
DomainSpectrin_repeat

DST DMD

4.84e-0329672IPR002017
Domain-

MARCHF10 SH3RF2 RIMS1 TOPORS MEX3B PDZRN3

5.41e-034496763.30.40.10
DomainSpectrin/alpha-actinin

DST DMD

5.87e-0332672IPR018159
DomainSPEC

DST DMD

5.87e-0332672SM00150
DomainZnf_RING/FYVE/PHD

MARCHF10 SH3RF2 RIMS1 TOPORS MEX3B PDZRN3

6.01e-03459676IPR013083
DomainZnf_RING

MARCHF10 SH3RF2 TOPORS MEX3B PDZRN3

6.27e-03326675IPR001841
Pubmed

RNF43 inhibits WNT5A-driven signaling and suppresses melanoma invasion and resistance to the targeted therapy.

RANBP2 LATS2 ALMS1 TTC28 PPP1R13B OCLN SIPA1L2 NUP153 AHNAK2

2.35e-0926368934702444
Pubmed

A central chaperone-like role for 14-3-3 proteins in human cells.

NF1 DST ALMS1 TTC28 MAPT SRGAP1 COBLL1 DTL SRSF11 CDC20 SIPA1L2 MEX3B AHNAK2

1.07e-08861681336931259
Pubmed

Proximity-dependent biotin identification (BioID) reveals a dynamic LSD1-CoREST interactome during embryonic stem cell differentiation.

NCOR1 RANBP2 DST WWOX ALMS1 ZNF280D TTC28 HUWE1 RBM20

1.27e-0741868934709266
Pubmed

Genome-wide CRISPR screens identify novel regulators of wild-type and mutant p53 stability.

NCOR1 ALMS1 TTC28 DTL PPP1R13B HUWE1 CDC20 SIPA1L2 TOPORS RBM20

2.13e-07588681038580884
Pubmed

Large-scale characterization of HeLa cell nuclear phosphoproteins.

NCOR1 RANBP2 NF1 SFSWAP MAPT PUM2 RIMS1 HUWE1 ODF2 TOPORS NUP153

2.99e-07774681115302935
Pubmed

Elongation factor 1 alpha1 and genes associated with Usher syndromes are downstream targets of GBX2.

ROBO1 MYO15A USH2A

5.95e-07968323144817
Pubmed

In-Depth In Vivo Crosslinking in Minutes by a Compact, Membrane-Permeable, and Alkynyl-Enrichable Crosslinker.

NCOR1 RANBP2 DST LATS2 SHANK2 FAM161A DTNB DTL SRSF11 RIMS1 DMD ODF2 SIPA1L2 PREX1

6.29e-071442681435575683
Pubmed

The human cytoplasmic dynein interactome reveals novel activators of motility.

NCOR1 RANBP2 ALMS1 TTC28 WASHC5 PPP1R13B PAWR ODF2 SIPA1L2 RBM39 PDZRN3

7.77e-07853681128718761
Pubmed

Phenotypic and Interaction Profiling of the Human Phosphatases Identifies Diverse Mitotic Regulators.

NCOR1 RANBP2 VIPAS39 WASHC5 DTNB PPP1R13B ROBO1 HUWE1 DMD ODF2 RBM20 NUP153

8.19e-071049681227880917
Pubmed

An antibody-based proximity labeling map reveals mechanisms of SARS-CoV-2 inhibition of antiviral immunity.

VIPAS39 WWOX ALMS1 TTC28 DTL PUM2 ROBO1 HUWE1 CDC20 PDZRN3

1.57e-06733681034672954
Pubmed

N-Terminal Acetyltransferase Naa40p Whereabouts Put into N-Terminal Proteoform Perspective.

RANBP2 DST WWOX ALMS1 RBM27 FARSB PUM2 SIPA1L2 RBM39 NUP153 AHNAK2

1.87e-06934681133916271
Pubmed

Neuron-specific protein network mapping of autism risk genes identifies shared biological mechanisms and disease-relevant pathologies.

CDKL5 RANBP2 VIPAS39 NF1 SHANK2 MAPT WASHC5 RIMS1 HUWE1 SIPA1L2 TRIM29 RBM39

1.93e-061139681236417873
Pubmed

Reciprocal interaction between SIRT6 and APC/C regulates genomic stability.

RANBP2 NF1 PELP1 RBM27 HUWE1 CDC20 RBM39 NUP153

2.34e-0644068834244565
Pubmed

Spatiotemporal profile of postsynaptic interactomes integrates components of complex brain disorders.

NCOR1 RANBP2 NF1 DST SHANK2 PELP1 EBF3 FARSB RIMS1 HUWE1 NUP153

2.51e-06963681128671696
Pubmed

Protein interaction network of the mammalian Hippo pathway reveals mechanisms of kinase-phosphatase interactions.

VIPAS39 NF1 DST LATS2 ALMS1 TTC28 PPP1R13B SIPA1L2

2.59e-0644668824255178
Pubmed

The nuclear pore protein Nup153 associates with chromatin and regulates cardiac gene expression in dystrophic mdx hearts.

DMD NUP153

3.77e-06268228513807
Pubmed

Generation of dystrophin short product-specific tag-insertion mouse: distinct Dp71 glycoprotein complexes at inhibitory postsynapse and glia limitans.

DTNB DMD

3.77e-06268235098363
Pubmed

Transcriptional signatures of synaptic vesicle genes define myotonic dystrophy type I neurodegeneration.

MAPT DMD

3.77e-06268233955002
Pubmed

Expression of estrogen receptor co-regulators NCoR and PELP1 in epithelial cells and myofibroblasts of colorectal carcinomas: cytoplasmic translocation of NCoR in epithelial cells correlates with better [corrected] prognosis.

NCOR1 PELP1

3.77e-06268219048289
Pubmed

Knockdown screens to knockout HIV-1.

RANBP2 NUP153

3.77e-06268218984154
Pubmed

Down-regulation of WW domain-containing oxidoreductase induces Tau phosphorylation in vitro. A potential role in Alzheimer's disease.

WWOX MAPT

3.77e-06268215126504
Pubmed

SRp54 (SFRS11), a regulator for tau exon 10 alternative splicing identified by an expression cloning strategy.

MAPT SRSF11

3.77e-06268216943417
Pubmed

beta-dystrobrevin, a new member of the dystrophin family. Identification, cloning, and protein associations.

DTNB DMD

3.77e-0626829395493
Pubmed

An improved smaller biotin ligase for BioID proximity labeling.

NCOR1 RANBP2 DST NUP153 AHNAK2

4.45e-0612368526912792
Pubmed

A human MAP kinase interactome.

RANBP2 DST COBLL1 PPP1R13B ROBO1 MUC12 DMD NUP153

4.87e-0648668820936779
Pubmed

Combinatorial targeting of a chromatin complex comprising Dot1L, menin and the tyrosine kinase BAZ1B reveals a new therapeutic vulnerability of endocrine therapy-resistant breast cancer.

NCOR1 RANBP2 SFSWAP PELP1 RBM27 WASHC5 SRSF11 AHDC1 RBM39 NUP153

5.65e-06847681035850772
Pubmed

A probability-based approach for high-throughput protein phosphorylation analysis and site localization.

NCOR1 RANBP2 RBM27 COBLL1 DTL HUWE1 TRIM29 NUP153

6.26e-0650368816964243
Pubmed

A dual-activity topoisomerase complex regulates mRNA translation and turnover.

ATMIN NCOR1 DST LATS2 SHANK2 HUWE1 SLC45A1 SIPA1L2 PREX1 AHDC1 AHNAK2

9.26e-061105681135748872
Pubmed

Protein phosphatase 1α interacting proteins in the human brain.

SH3RF2 PPP1R13B SLC45A1 PREX1

9.33e-066768422321011
Pubmed

BioID-based intact cell interactome of the Kv1.3 potassium channel identifies a Kv1.3-STAT3-p53 cellular signaling pathway.

RANBP2 DST WWOX TTC28 COBLL1 FARSB ROBO1 OCLN NUP153

9.64e-0670868939231216
Pubmed

Cerebellar synaptic defects and abnormal motor behavior in mice lacking alpha- and beta-dystrobrevin.

DTNB DMD

1.13e-05368216540561
Pubmed

Heterogeneous susceptibility of circulating SIV isolate capsids to HIV-interacting factors.

RANBP2 NUP153

1.13e-05368223883001
Pubmed

The corticofugal neuron-associated genes ROBO1, SRGAP1, and CTIP2 exhibit an anterior to posterior gradient of expression in early fetal human neocortex development.

SRGAP1 ROBO1

1.13e-05368221060114
Pubmed

Implications of increased S100β and Tau5 proteins in dystrophic nerves of two mdx mouse models for Duchenne muscular dystrophy.

MAPT DMD

1.13e-05368232240725
Pubmed

beta-dystrobrevin, a member of the dystrophin-related protein family.

DTNB DMD

1.13e-0536829419360
Pubmed

E-cadherin interactome complexity and robustness resolved by quantitative proteomics.

CDKL5 DST WWOX SHANK2 COBLL1 PPP1R13B OCLN TRIM29

1.45e-0556568825468996
Pubmed

The Nse5/6-like SIMC1-SLF2 complex localizes SMC5/6 to viral replication centers.

NCOR1 RANBP2 WWOX SFSWAP PELP1 RBM27 FARSB SRSF11 RBM39 NUP153

1.58e-05954681036373674
Pubmed

A Multipronged Unbiased Strategy Guides the Development of an Anti-EGFR/EPHA2-Bispecific Antibody for Combination Cancer Therapy.

DST WWOX PPP1R13B ROBO1 DMD OCLN SIPA1L2

1.86e-0542168736976175
Pubmed

KCTD13-mediated ubiquitination and degradation of GluN1 regulates excitatory synaptic transmission and seizure susceptibility.

CDKL5 ILDR2 NF1 DST SHANK2 MAPT WASHC5 FARSB RIMS1 DMD SIPA1L2 RBM39

1.94e-051431681237142655
Pubmed

Defining the proximal interaction networks of Arf GTPases reveals a mechanism for the regulation of PLD1 and PI4KB.

CDKL5 NCOR1 VIPAS39 DST SFSWAP TTC28 ROBO1 HUWE1 OCLN

2.01e-0577768935844135
Pubmed

HIV-1 capsid-cyclophilin interactions determine nuclear import pathway, integration targeting and replication efficiency.

RANBP2 NUP153

2.25e-05468222174692
Pubmed

Beta-dystrobrevin interacts directly with kinesin heavy chain in brain.

DTNB DMD

2.25e-05468214600269
Pubmed

Cytoplasmic ASPP1 inhibits apoptosis through the control of YAP.

LATS2 PPP1R13B

2.25e-05468221041411
Pubmed

Molecular mechanisms of retroviral integration site selection.

RANBP2 NUP153

2.25e-05468225147212
Pubmed

The interaction with HMG20a/b proteins suggests a potential role for beta-dystrobrevin in neuronal differentiation.

DTNB DMD

2.25e-05468220530487
Pubmed

Cloning and characterization of mouse ACF7, a novel member of the dystonin subfamily of actin binding proteins.

DST DMD

2.25e-0546828954775
Pubmed

Tpr is localized within the nuclear basket of the pore complex and has a role in nuclear protein export.

RANBP2 NUP153

2.25e-05468211839768
Pubmed

A High-Density Human Mitochondrial Proximity Interaction Network.

VIPAS39 DST WWOX ALMS1 TTC28 DTL PUM2 HUWE1 CDC20 RBM39 RBM20 AHNAK2

2.99e-051496681232877691
Pubmed

Targeting USP10 induces degradation of oncogenic ANLN in esophageal squamous cell carcinoma.

DST PELP1 RBM27 SRGAP1 FARSB PAWR CDC20 TOPORS TRIM29 RBM39 NUP153

3.05e-051257681136526897
Pubmed

Spatial proteomics reveal that the protein phosphatase PTP1B interacts with and may modify tyrosine phosphorylation of the rhomboid protease RHBDL4.

RANBP2 DST WWOX OCLN NUP153

3.73e-0519168531177093
Pubmed

RIM1/2 in retinal ganglion cells are required for the refinement of ipsilateral axons and eye-specific segregation.

MAPT RIMS1

3.75e-05568228607399
Pubmed

RanGTP mediates nuclear pore complex assembly.

RANBP2 NUP153

3.75e-05568212894213
Pubmed

The N-terminal domain of the mammalian nucleoporin p62 interacts with other nucleoporins of the FXFG family during interphase.

RANBP2 NUP153

3.75e-05568216730000
Pubmed

Steady-state nuclear localization of exportin-t involves RanGTP binding and two distinct nuclear pore complex interaction domains.

RANBP2 NUP153

3.75e-05568212138183
Pubmed

Assembly of multiple dystrobrevin-containing complexes in the kidney.

DTNB DMD

3.75e-05568210893187
Pubmed

Neurotransmitter release at the thalamocortical synapse instructs barrel formation but not axon patterning in the somatosensory cortex.

MAPT RIMS1

3.75e-05568222553025
Pubmed

Analysis of the 'angulin' proteins LSR, ILDR1 and ILDR2--tricellulin recruitment, epithelial barrier function and implication in deafness pathogenesis.

ILDR2 OCLN

3.75e-05568223239027
Pubmed

HIV-1 Resistance to the Capsid-Targeting Inhibitor PF74 Results in Altered Dependence on Host Factors Required for Virus Nuclear Entry.

RANBP2 NUP153

3.75e-05568226109731
Pubmed

A giant nucleopore protein that binds Ran/TC4.

RANBP2 NUP153

3.75e-0556827603572
Pubmed

A model for cofactor use during HIV-1 reverse transcription and nuclear entry.

RANBP2 NUP153

3.75e-05568224525292
Pubmed

Identification of SUMO Binding Proteins Enriched after Covalent Photo-Cross-Linking.

NCOR1 RANBP2 PELP1 FARSB HUWE1 AHNAK2

4.81e-0533268632786267
Pubmed

Prediction of the coding sequences of unidentified human genes. XIV. The complete sequences of 100 new cDNA clones from brain which code for large proteins in vitro.

NCOR1 SHANK2 TTC28 PDZRN3

5.30e-0510468410470851
Pubmed

Myospryn is a novel binding partner for dysbindin in muscle.

DTNB DMD

5.62e-05668214688250
Pubmed

The Lats2 tumor suppressor augments p53-mediated apoptosis by promoting the nuclear proapoptotic function of ASPP1.

LATS2 PPP1R13B

5.62e-05668221041410
Pubmed

Different dystrophin-like complexes are expressed in neurons and glia.

DTNB DMD

5.62e-05668210545507
Pubmed

Signal transduction in neuronal migration: roles of GTPase activating proteins and the small GTPase Cdc42 in the Slit-Robo pathway.

SRGAP1 ROBO1

5.62e-05668211672528
Pubmed

The WWOX tumor suppressor is essential for postnatal survival and normal bone metabolism.

WWOX IBSP

5.62e-05668218487609
Pubmed

Gradient of increasing affinity of importin beta for nucleoporins along the pathway of nuclear import.

RANBP2 NUP153

5.62e-05668211266456
Pubmed

Interactomes of Glycogen Synthase Kinase-3 Isoforms.

DST ALMS1 TTC28 ROBO1 SIPA1L2

5.73e-0520968536779422
Pubmed

Qualitative and quantitative analyses of protein phosphorylation in naive and stimulated mouse synaptosomal preparations.

NF1 DST SHANK2 MAPT RIMS1 SIPA1L2

6.14e-0534768617114649
Pubmed

The protein interaction landscape of the human CMGC kinase group.

CDKL5 RANBP2 SHANK2 MARCHF10 ALMS1 HUWE1 SIPA1L2 RBM39

6.28e-0569568823602568
Pubmed

Schwannoma development is mediated by Hippo pathway dysregulation and modified by RAS/MAPK signaling.

NF1 LATS2

7.86e-05768232960816
Pubmed

New insights in the role of nucleoporins: a bridge leading to concerted steps from HIV-1 nuclear entry until integration.

RANBP2 NUP153

7.86e-05768224051001
Pubmed

Reinvestigation of the dysbindin subunit of BLOC-1 (biogenesis of lysosome-related organelles complex-1) as a dystrobrevin-binding protein.

DTNB DMD

7.86e-05768216448387
Pubmed

Gamma1- and gamma2-syntrophins, two novel dystrophin-binding proteins localized in neuronal cells.

DTNB DMD

7.86e-05768210747910
Pubmed

Evidence for a role of srGAP3 in the positioning of commissural axons within the ventrolateral funiculus of the mouse spinal cord.

SRGAP1 ROBO1

7.86e-05768221655271
Pubmed

Alpha-dystrobrevin-1 recruits alpha-catulin to the alpha1D-adrenergic receptor/dystrophin-associated protein complex signalosome.

DTNB DMD

7.86e-05768221115837
Pubmed

Enzymes of the SUMO modification pathway localize to filaments of the nuclear pore complex.

RANBP2 NUP153

7.86e-05768212192048
Pubmed

Construction of expression-ready cDNA clones for KIAA genes: manual curation of 330 KIAA cDNA clones.

DST ALMS1 TTC28 PUM2 PREX1

8.11e-0522568512168954
Pubmed

Comprehensive identification of phosphorylation sites in postsynaptic density preparations.

RANBP2 SHANK2 MAPT RIMS1 RBM39

9.18e-0523168516452087
Pubmed

HENA, heterogeneous network-based data set for Alzheimer's disease.

DST ALMS1 PPP1R13B DMD

9.25e-0512068431413325
Pubmed

The E3 ubiquitin ligase FBXL6 controls the quality of newly synthesized mitochondrial ribosomal proteins.

DST PELP1 RBM27 FARSB PAWR HUWE1 RBM39

9.69e-0554768737267103
Pubmed

USP7 targets XIAP for cancer progression: Establishment of a p53-independent therapeutic avenue for glioma.

DST PELP1 COBLL1 DMD RBM39

9.75e-0523468536243803
Pubmed

Roles of HIV-1 capsid in viral replication and immune evasion.

RANBP2 NUP153

1.05e-04868225036886
Pubmed

A genome-wide association study of clinical symptoms of dissociation in a trauma-exposed sample.

SIPA1L2 MEX3B

1.05e-04868224677629
Pubmed

Imaging within single NPCs reveals NXF1's role in mRNA export on the cytoplasmic side of the pore.

RANBP2 NUP153

1.05e-04868231375530
Pubmed

Phosphoproteomic analysis of the developing mouse brain.

VIPAS39 WWOX PELP1 MAPT HUWE1

1.23e-0424668515345747
Pubmed

Protein-protein interactions between large proteins: two-hybrid screening using a functionally classified library composed of long cDNAs.

DST ALMS1 TTC28 PUM2

1.26e-0413068412421765
Pubmed

MYC multimers shield stalled replication forks from RNA polymerase.

RANBP2 SFSWAP PELP1 RBM27 SRSF11 HUWE1 CDC20 RBM39 NUP153

1.28e-0498968936424410
Pubmed

Identification of SH3 domain interaction partners of human FasL (CD178) by phage display screening.

SH3RF2 SRGAP1 MYO15A

1.31e-045068319807924
Pubmed

Cloning and characterization of human karyopherin beta3.

RANBP2 NUP153

1.34e-0496829114010
Pubmed

Genome-wide CRISPR screen identifies HNRNPL as a prostate cancer dependency regulating RNA splicing.

ATMIN LATS2 WWOX SHANK2 MAPT DTNB SRSF11 RIMS1 HUWE1 AHDC1 RBM39

1.39e-041489681128611215
Pubmed

Direct interaction between hnRNP-M and CDC5L/PLRG1 proteins affects alternative splice site choice.

RANBP2 NF1 SRSF11 HUWE1 CDC20 RBM39 NUP153

1.42e-0458268720467437
Pubmed

The RNA-mediated estrogen receptor α interactome of hormone-dependent human breast cancer cell nuclei.

RANBP2 ZCCHC9 DST SHANK2 SFSWAP RBM27 FARSB PUM2 ODF2 PREX1 AHDC1

1.45e-041497681131527615
Pubmed

Genetic and Proteomic Interrogation of Lower Confidence Candidate Genes Reveals Signaling Networks in β-Catenin-Active Cancers.

NCOR1 RANBP2 FARSB SRSF11 PAWR HUWE1 CDC20 TOPORS AHDC1 RBM39

1.49e-041247681027684187
Pubmed

Functional proteomics mapping of a human signaling pathway.

NCOR1 DST PELP1 PPP1R13B HUWE1 TOPORS TRIM29

1.56e-0459168715231748
Pubmed

High-throughput mapping of a dynamic signaling network in mammalian cells.

WWOX SRGAP1 OCLN CDC20 MEX3B

1.59e-0426068515761153
Pubmed

Identifying biological pathways that underlie primordial short stature using network analysis.

RANBP2 NF1 DST PELP1 SRSF11 PAWR HUWE1 RBM39 NUP153

1.67e-04102468924711643
Pubmed

Spatiotemporal Loss of NF1 in Schwann Cell Lineage Leads to Different Types of Cutaneous Neurofibroma Susceptible to Modification by the Hippo Pathway.

NF1 LATS2

1.68e-041068230348677
Pubmed

Perturbed hematopoiesis in mice lacking ATMIN.

ATMIN OGG1

1.68e-041068227581360
InteractionCEP128 interactions

LATS2 ALMS1 MAPT WASHC5 DTNB PPP1R13B PAWR ODF2 CDC20 SIPA1L2

4.91e-082976710int:CEP128
InteractionLZTS2 interactions

LATS2 WWOX ALMS1 TTC28 SH3RF2 FAM161A PPP1R13B HUWE1 ODF2 OCLN SIPA1L2 TRIM29

1.07e-075126712int:LZTS2
InteractionNINL interactions

NCOR1 LATS2 ALMS1 TTC28 FAM161A PPP1R13B HUWE1 ODF2 CDC20 SIPA1L2 RBM39

3.03e-074586711int:NINL
InteractionPPP1CA interactions

CDKL5 NCOR1 WWOX MAPT SH3RF2 PPP1R13B SRSF11 PAWR HUWE1 SLC45A1 PREX1 RBM39 NUP153

4.04e-076966713int:PPP1CA
InteractionYWHAH interactions

NF1 DST LATS2 ALMS1 SFSWAP TTC28 MAPT SRGAP1 COBLL1 DTL RIMS1 HUWE1 CDC20 SIPA1L2 MEX3B AHNAK2

4.59e-0711026716int:YWHAH
InteractionYWHAG interactions

NF1 DST LATS2 ALMS1 TTC28 MAPT SRGAP1 COBLL1 DTL SRSF11 PAWR HUWE1 CDC20 SIPA1L2 MEX3B AHNAK2

2.37e-0612486716int:YWHAG
InteractionYWHAZ interactions

NCOR1 NF1 DST LATS2 WWOX TTC28 COL6A6 RBM27 MAPT SRGAP1 COBLL1 DTL HUWE1 SIPA1L2 MEX3B RBM39

4.83e-0613196716int:YWHAZ
InteractionKIAA1549 interactions

DST LATS2 PPP1R13B OCLN SIPA1L2

9.87e-0686675int:KIAA1549
InteractionKDM1A interactions

NCOR1 RANBP2 DST WWOX ALMS1 ZNF280D PELP1 TTC28 MAPT FAM161A HUWE1 RBM39 RBM20

1.12e-059416713int:KDM1A
InteractionRNF43 interactions

RANBP2 LATS2 ALMS1 TTC28 PPP1R13B OCLN SIPA1L2 NUP153 AHNAK2

1.14e-05427679int:RNF43
InteractionBRCA1 interactions

NF1 DST WWOX ALMS1 ZNF280D TTC28 MAPT FAM161A PPP1R13B FARSB HUWE1 ODF2 TRIM29 USH2A NUP153

1.15e-0512496715int:BRCA1
InteractionAFDN interactions

CDKL5 ILDR2 DST LATS2 MAPT PPP1R13B OCLN SIPA1L2

1.43e-05333678int:AFDN
InteractionTNIK interactions

CDKL5 DST SHANK2 MAPT PPP1R13B RIMS1 HUWE1 OCLN

3.74e-05381678int:TNIK
InteractionARPP19 interactions

MAPT ROBO1 NUP153

3.84e-0520673int:ARPP19
InteractionDVL3 interactions

WWOX MAPT HUWE1 ODF2 MEX3B RBM39 PDZRN3

3.96e-05280677int:DVL3
InteractionSIPA1L3 interactions

LATS2 ODF2 OCLN SIPA1L2 RBM39

4.57e-05118675int:SIPA1L3
InteractionTJP2 interactions

LATS2 ALMS1 TTC28 PPP1R13B ODF2 OCLN RBM39

4.73e-05288677int:TJP2
InteractionIKZF5 interactions

RBM27 PUM2 ODF2 AHDC1

6.48e-0565674int:IKZF5
InteractionDYRK1A interactions

NF1 LATS2 MAPT PAWR HUWE1 SIPA1L2 RBM39 NUP153 AHNAK2

8.45e-05552679int:DYRK1A
InteractionTJP1 interactions

CDKL5 LATS2 MAPT TLE2 PPP1R13B ODF2 OCLN

1.01e-04325677int:TJP1
InteractionEPHA2 interactions

NF1 DST LATS2 WWOX PPP1R13B ROBO1 DMD OCLN NUDT9 SIPA1L2

1.24e-047196710int:EPHA2
InteractionLYN interactions

ILDR2 NF1 DST COBLL1 DTL PPP1R13B ROBO1 DMD OCLN AHNAK2

1.25e-047206710int:LYN
InteractionANKFY1 interactions

DST ALMS1 TLE2 HUWE1 OCLN SIPA1L2

1.33e-04236676int:ANKFY1
InteractionPHF21A interactions

RANBP2 DST WWOX ALMS1 TTC28 HUWE1 RBM20

1.41e-04343677int:PHF21A
InteractionSUMO2 interactions

NCOR1 RANBP2 DST PELP1 FARSB HUWE1 TOPORS NUP153 AHNAK2

1.42e-04591679int:SUMO2
InteractionLCK interactions

NF1 DST MAPT COBLL1 PPP1R13B OCLN SIPA1L2 AHNAK2

1.45e-04463678int:LCK
InteractionDVL1 interactions

WWOX MAPT TLE2 HUWE1 OCLN

1.47e-04151675int:DVL1
InteractionGSK3A interactions

DST ALMS1 TTC28 MAPT ROBO1 SIPA1L2 TOPORS AHDC1

1.47e-04464678int:GSK3A
InteractionARHGEF7 interactions

SHANK2 MAPT SRGAP1 HUWE1 PREX1

1.56e-04153675int:ARHGEF7
InteractionCPVL interactions

LATS2 WWOX PPP1R13B HUWE1 CDC20

1.71e-04156675int:CPVL
InteractionLZTS3 interactions

CDKL5 WWOX SIPA1L2

1.78e-0433673int:LZTS3
InteractionNIN interactions

LATS2 ALMS1 TTC28 PPP1R13B ODF2 SIPA1L2 PDZRN3

1.86e-04359677int:NIN
InteractionNUP43 interactions

NCOR1 RANBP2 DST ZNF280D PELP1 AHDC1 RBM39 NUP153 AHNAK2

2.15e-04625679int:NUP43
InteractionRCOR1 interactions

NCOR1 RANBP2 DST WWOX ALMS1 TTC28 HUWE1 RBM20

2.26e-04494678int:RCOR1
InteractionRHBDF2 interactions

RANBP2 DST WWOX OCLN NUP153

2.41e-04168675int:RHBDF2
InteractionCEP85 interactions

LATS2 ALMS1 TLE2 ODF2 MEX3B

2.48e-04169675int:CEP85
InteractionSIPA1L1 interactions

NF1 LATS2 ODF2 OCLN SIPA1L2

2.84e-04174675int:SIPA1L1
InteractionMARK2 interactions

NF1 MAPT DTNB HUWE1 DMD OCLN

2.98e-04274676int:MARK2
InteractionPPP1R13B interactions

LATS2 DTNB PPP1R13B OCLN MEX3B

2.99e-04176675int:PPP1R13B
InteractionAPC interactions

CDKL5 RANBP2 DST LATS2 PPP1R13B OCLN NUP153

3.04e-04389677int:APC
InteractionCEP63 interactions

DST ALMS1 FAM161A DTNB PPP1R13B

3.23e-04179675int:CEP63
InteractionARL8A interactions

TTC28 MAPT HUWE1 OCLN

3.31e-0499674int:ARL8A
InteractionTNRC6B interactions

LATS2 ALMS1 MAPT PUM2 ODF2 MEX3B

3.47e-04282676int:TNRC6B
InteractionHSPA4 interactions

NCOR1 WWOX ALMS1 PELP1 MAPT DTL PAWR HUWE1 RBM39

3.48e-04667679int:HSPA4
InteractionNAA40 interactions

RANBP2 DST WWOX ALMS1 RBM27 FARSB PUM2 SIPA1L2 RBM39 NUP153 AHNAK2

3.52e-049786711int:NAA40
InteractionNUP160 interactions

RANBP2 LATS2 SRSF11 HUWE1 NUP153

3.58e-04183675int:NUP160
InteractionGOLGA1 interactions

DST ALMS1 TTC28 PPP1R13B AHNAK2

3.58e-04183675int:GOLGA1
InteractionERC1 interactions

LATS2 MAPT PAWR RIMS1 HUWE1

3.95e-04187675int:ERC1
InteractionFXR1 interactions

NCOR1 RANBP2 MAPT EBF3 FAM161A FARSB MEX3B RBM39 NUP153

3.96e-04679679int:FXR1
InteractionENTR1 interactions

LATS2 ALMS1 WASHC5 PPP1R13B ODF2

4.05e-04188675int:ENTR1
InteractionFASLG interactions

SH3RF2 SRGAP1 DMD MYO15A

4.14e-04105674int:FASLG
InteractionRAB10 interactions

RANBP2 MAPT TLE2 RIMS1 RBM39

4.25e-04190675int:RAB10
InteractionIPO5 interactions

RANBP2 WWOX PELP1 MAPT PAWR HUWE1 NUP153

4.42e-04414677int:IPO5
InteractionPARD3 interactions

DST LATS2 PPP1R13B OCLN SIPA1L2 MEX3B

4.65e-04298676int:PARD3
InteractionUBAP2L interactions

CDKL5 MAPT PUM2 TRIM29 MEX3B RBM39

4.65e-04298676int:UBAP2L
InteractionYWHAB interactions

VIPAS39 NF1 DST TTC28 MAPT SRGAP1 COBLL1 DTL SIPA1L2 MEX3B AHNAK2

4.78e-0410146711int:YWHAB
InteractionTARS1 interactions

WWOX RBM27 FARSB HUWE1 RBM39

4.79e-04195675int:TARS1
InteractionEZR interactions

DST WWOX MAPT WASHC5 COBLL1 FARSB OCLN RBM39

4.80e-04553678int:EZR
InteractionYTHDF1 interactions

CDKL5 MAPT PUM2 MEX3B RBM39 NUP153

4.99e-04302676int:YTHDF1
InteractionNUP35 interactions

NCOR1 RANBP2 RBM27 PUM2 AHDC1 RBM20 NUP153

5.09e-04424677int:NUP35
InteractionSYNGAP1 interactions

CDKL5 SHANK2 MAPT SRGAP1 HUWE1 SIPA1L2

5.44e-04307676int:SYNGAP1
InteractionCAPZA2 interactions

DST MAPT WASHC5 FAM161A PAWR TRIM29 RBM39

5.54e-04430677int:CAPZA2
InteractionKCNA3 interactions

RANBP2 DST WWOX TTC28 COBLL1 FARSB ROBO1 RIMS1 OCLN NUP153

5.73e-048716710int:KCNA3
InteractionLHX5 interactions

SRGAP1 DMD

5.87e-0411672int:LHX5
InteractionJMJD6 interactions

SFSWAP RBM27 SRSF11 PAWR RBM39

6.01e-04205675int:JMJD6
InteractionMSH2 interactions

WWOX MAPT DTL SRSF11 HUWE1 TRIM29

6.03e-04313676int:MSH2
GeneFamilyPDZ domain containing

SHANK2 RIMS1 SIPA1L2 PREX1 PDZRN3 AHNAK2

3.75e-061525061220
GeneFamilyArmadillo repeat containing|Protein phosphatase 1 regulatory subunits

NCOR1 ZCCHC9 MAPT SH3RF2 PPP1R13B OCLN

1.02e-05181506694
GeneFamilyRing finger proteins

MARCHF10 SH3RF2 TOPORS MEX3B PDZRN3

9.51e-0427550558
GeneFamilyZinc fingers ZZ-type|Lysine acetyltransferases

DTNB DMD

1.11e-031850291
GeneFamilyZinc fingers RANBP2-type |RNA binding motif containing

RANBP2 NUP153

1.52e-032150289
GeneFamilyRNA binding motif containing

RBM27 SRSF11 RBM39 RBM20

2.82e-03213504725
GeneFamilyNucleoporins

RANBP2 NUP153

3.53e-03325021051
GeneFamilyCollagens

COL6A6 COL21A1

7.18e-0346502490
GeneFamilyFibronectin type III domain containing

IGDCC3 ROBO1 USH2A

9.83e-03160503555
CoexpressionAtlasDevelopingGonad_e18.5_ovary_emap-12283_k-means-cluster#3_top-relative-expression-ranked_500

ILDR2 SFSWAP SRSF11 MEX3B RBM39

1.49e-0597685gudmap_developingGonad_e18.5_ovary_500_k3
CoexpressionAtlasDevelopingKidney_e15.5_Podocyte cells_emap-27915_k-means-cluster#4_top-relative-expression-ranked_500

ILDR2 MAPT SRGAP1 HS3ST6

1.55e-0547684gudmap_developingKidney_e15.5_Podocyte cells_500_k4
CoexpressionAtlasDevelopingGonad_e16.5_ovary_emap-9563_k-means-cluster#5_top-relative-expression-ranked_500

ILDR2 SFSWAP SRSF11 MEX3B RBM39

2.62e-05109685gudmap_developingGonad_e16.5_ovary_500_k5
CoexpressionAtlasDevelopingGonad_e14.5_ ovary_emap-6699_top-relative-expression-ranked_1000

ILDR2 WWOX ALMS1 SFSWAP DTNB SPDYA SRSF11 HUWE1 MEX3B RBM39 NUP153

3.31e-057766811gudmap_developingGonad_e14.5_ ovary_1000
CoexpressionAtlasDevelopingLowerUrinaryTract_e13.5_bladder neck-urethr epithel_emap-30875_top-relative-expression-ranked_1000

NCOR1 DST FAM161A ROBO1 PAWR HUWE1 DMD ODF2 OCLN TRIM29 PDZRN3

4.37e-058006811gudmap_developingLowerUrinaryTract_e13.5_bladder neck-urethr epithel_1000
CoexpressionAtlasDevelopingKidney_e15.5_Podocyte cells_emap-27915_k-means-cluster#4_top-relative-expression-ranked_200

ILDR2 SRGAP1 HS3ST6

5.31e-0523683gudmap_developingKidney_e15.5_Podocyte cells_200_k4
CoexpressionAtlasDevelopingGonad_e18.5_ovary_emap-12283_k-means-cluster#2_top-relative-expression-ranked_1000

ILDR2 SFSWAP SRSF11 MEX3B RBM39 NUP153

5.72e-05210686gudmap_developingGonad_e18.5_ovary_1000_k2
CoexpressionAtlasFacebaseRNAseq_e10.5_Neural Epithelium Flanking Eminence_top-relative-expression-ranked_1000_k-means-cluster#2

NCOR1 RANBP2 ALMS1 ZNF280D SRGAP1 IGDCC3 ODF2

6.10e-05311687Facebase_RNAseq_e10.5_Neural Epithelium Flanking Eminence_1000_K2
CoexpressionAtlasratio_induced-Ectoderm_vs_StemCell_top-relative-expression-ranked_2500_k-means-cluster#3

ILDR2 TTC28 EBF3 SH3RF2 RIMS1 SLC45A1 DMD MYO15A SIPA1L2 AHDC1 RBM20

7.38e-058486811ratio_ECTO_vs_SC_2500_K3
CoexpressionAtlasFacebaseRNAseq_e10.5_Neural Epithelium Overlying Lateral Eminence_top-relative-expression-ranked_1000_k-means-cluster#2

ILDR2 RANBP2 ALMS1 RBM27 IGDCC3 DMD SIPA1L2

8.51e-05328687Facebase_RNAseq_e10.5_Neural Epithelium Overlying Lateral Eminence_1000_K2
CoexpressionAtlasFacebaseRNAseq_e9.5_Mandibular Arch_top-relative-expression-ranked_500_k-means-cluster#5

IGDCC3 SRSF11 ODF2

1.08e-0429683Facebase_RNAseq_e9.5_Mandibular Arch_500_K5
CoexpressionAtlasDevelopingKidney_e15.5_Podocyte cells_emap-27915_k-means-cluster#2_top-relative-expression-ranked_1000

ILDR2 MAPT SRGAP1 HS3ST6

1.60e-0485684gudmap_developingKidney_e15.5_Podocyte cells_1000_k2
CoexpressionAtlasFacebaseRNAseq_e10.5_Neural Epithelium Overlying Lateral Eminence_top-relative-expression-ranked_2500_k-means-cluster#5

ILDR2 RANBP2 DST ALMS1 RBM27 IGDCC3 DMD ODF2 SIPA1L2

2.30e-04654689Facebase_RNAseq_e10.5_Neural Epithelium Overlying Lateral Eminence_2500_K5
CoexpressionAtlasFacebaseRNAseq_e10.5_Neural Epithelium Flanking Eminence_top-relative-expression-ranked_1000

ILDR2 NCOR1 RANBP2 ALMS1 ZNF280D SRGAP1 IGDCC3 SRSF11 PAWR DMD ODF2

2.84e-049896811Facebase_RNAseq_e10.5_Neural Epithelium Flanking Eminence_1000
CoexpressionAtlasDevelopingLowerUrinaryTract_e13.5_bladder neck-urethr mesench_emap-3087_top-relative-expression-ranked_1000

NCOR1 DST MAPT EBF3 ROBO1 HUWE1 PREX1 MEX3B RBM20 PDZRN3

2.86e-048276810gudmap_developingLowerUrinaryTract_e13.5_bladder neck-urethr mesench_1000
CoexpressionAtlasFacebaseRNAseq_e10.5_Mandibular Arch_top-relative-expression-ranked_500_k-means-cluster#5

ALMS1 ZNF280D IGDCC3 SRSF11 ODF2

3.26e-04186685Facebase_RNAseq_e10.5_Mandibular Arch_500_K5
CoexpressionAtlasFacebaseRNAseq_e10.5_Lateral Nasal Eminence_top-relative-expression-ranked_1000_k-means-cluster#3

ZNF280D TTC28 SRGAP1 IGDCC3 SIPA1L2 TOPORS

3.38e-04291686Facebase_RNAseq_e10.5_Lateral Nasal Eminence_1000_K3
CoexpressionAtlasFacebaseRNAseq_e10.5_Lateral Nasal Eminence_top-relative-expression-ranked_500_k-means-cluster#4

ZNF280D TTC28 IGDCC3 SIPA1L2 TOPORS

3.77e-04192685Facebase_RNAseq_e10.5_Lateral Nasal Eminence_500_K4
ToppCellMesenchymal-matrix_fibroblast_1_cell|World / Lineage, Cell type, age group and donor

HOXB3 DST TTC28 COL6A6 COL21A1 SRGAP1 ROBO1 PDZRN3

6.63e-10193698acad568621ed677031797b8c2e34dafea798d681
ToppCellAdult-Mesenchymal-matrix_fibroblast_1_cell|Adult / Lineage, Cell type, age group and donor

HOXB3 DST COL6A6 COL21A1 SRGAP1 ROBO1 PDZRN3

2.22e-0819569761c9e09fc84d1012e472185d70ad0a06cee30d6e
ToppCellCOVID-19-Fibroblasts-Alveolar_FB|COVID-19 / group, cell type (main and fine annotations)

DST TTC28 COL6A6 COL21A1 SRGAP1 ROBO1 PDZRN3

2.22e-08195697603050beeb33c331d4b2e3fa46cae3f3e0e4bdc7
ToppCellFetal_29-31_weeks-Mesenchymal|Fetal_29-31_weeks / Lineage, Cell type, age group and donor

HOXB3 DST TTC28 COL6A6 COL21A1 SRGAP1 PDZRN3

2.46e-0819869721cf4d81386761d09d0f6829c01c198e5524176d
ToppCellMesenchymal|World / Lineage, Cell type, age group and donor

HOXB3 DST TTC28 COL6A6 COL21A1 ROBO1 PDZRN3

2.55e-081996974bac110c2b3609f6ee5d0e3275da0824a6240270
ToppCellBronchial-NucSeq-Stromal-Fibroblastic-Fibro_alveolar|NucSeq / Cell types per location group and 10X technology with lineage, and cell group designations

HOXB3 DST COL6A6 COL21A1 SRGAP1 ROBO1 PDZRN3

2.64e-08200697e8462395fee0a532d1e7ec7f1795f28c42af6541
ToppCellParenchymal-NucSeq-Stromal-Fibroblastic-Fibro_alveolar|NucSeq / Cell types per location group and 10X technology with lineage, and cell group designations

HOXB3 DST COL6A6 COL21A1 SRGAP1 ROBO1 PDZRN3

2.64e-0820069734f52003988ce6329d8deeee1ab875fa77e01e9d
ToppCellfacs-Lung-Endomucin-24m-Epithelial-Alveolar_Epithelial_Type_2|Lung / Lung_Trachea - method, tissue, subtissue, age, lineage, cell ontology and free annotation

PELP1 SRGAP1 COBLL1 HS3ST6 CDC20 SIPA1L2

1.97e-07162696497ae9f86a5e7946d0fde932b35719a382a6b691
ToppCellfacs-Lung-Endomucin-24m-Epithelial-type_II_pneumocyte|Lung / Lung_Trachea - method, tissue, subtissue, age, lineage, cell ontology and free annotation

PELP1 SRGAP1 COBLL1 HS3ST6 CDC20 SIPA1L2

1.97e-071626967b2949eba2b4aea239d96ed82aafab13b07624eb
ToppCellControl-Fibroblasts-Alveolar_FB|Control / group, cell type (main and fine annotations)

DST COL6A6 COL21A1 SRGAP1 ROBO1 PDZRN3

4.59e-0718769692d468dde81125d51daf7abd4703741abe1ab91c
ToppCellControl-Fibroblasts-Other_FB|Control / group, cell type (main and fine annotations)

HOXB3 DST COL21A1 ROBO1 DMD PDZRN3

4.59e-07187696bd3739c4a52aa1ba5deffd778e113a9800f7e158
ToppCellLA-13._Vascular_Smooth_Muscle|LA / Chamber and Cluster_Paper

COL21A1 COBLL1 PAWR RIMS1 DMD PDZRN3

4.73e-0718869634e1b074a3995aa46ab194eb45115d76d1a5514d
ToppCellCOVID-19-Fibroblasts-Other_FB|COVID-19 / group, cell type (main and fine annotations)

HOXB3 DST TTC28 ROBO1 DMD PDZRN3

5.52e-07193696e6b75be08e33c1de079fb5c02f0b4468128b369c
ToppCellAdult-Mesenchymal-matrix_fibroblast_1_cell-D231|Adult / Lineage, Cell type, age group and donor

HOXB3 COL6A6 COL21A1 SRGAP1 ROBO1 PDZRN3

5.52e-07193696ef2f456c094e6e3c6ee81e0668c953cb8d0e1c0a
ToppCellAdult-Mesenchymal-matrix_fibroblast_1_cell-D122|Adult / Lineage, Cell type, age group and donor

DST COL6A6 COL21A1 SRGAP1 ROBO1 PDZRN3

5.86e-07195696aa0add081881d349099d12efca5cdee098038d4e
ToppCellPCW_13-14-Mesenchymal|PCW_13-14 / Celltypes from embryonic and fetal-stage human lung

HOXB3 DST TTC28 COL21A1 ROBO1 PDZRN3

6.22e-0719769673a2085d2682d636726a5432d572ae2a3fbe1c3f
ToppCellCOVID-19-lung-Fibroblast|COVID-19 / Disease (COVID-19 only), tissue and cell type

DST COL6A6 COL21A1 SRGAP1 ROBO1 PDZRN3

6.41e-071986963ec01a55ade5e1627258cc3cfebb2c3207a4cb43
ToppCellPCW_10-12-Mesenchymal-Mesenchymal_fibroblastic|PCW_10-12 / Celltypes from embryonic and fetal-stage human lung

DST TTC28 COL6A6 COL21A1 ROBO1 PDZRN3

6.41e-0719869617dc055e2a289496d9c5cdbf3297bdf906dc6d22
ToppCellPCW_10-12-Mesenchymal|PCW_10-12 / Celltypes from embryonic and fetal-stage human lung

HOXB3 DST TTC28 COL21A1 ROBO1 PDZRN3

6.60e-07199696a09292de4c4447b8eee55d401808e43b817321cc
ToppCellTracheal-NucSeq|Tracheal / Cell types per location group and 10X technology with lineage, and cell group designations

NF1 WWOX SHANK2 TTC28 DTNB DMD

6.60e-0719969694b94b17ca18b8dc27b91da1f2ccf89e03cc7035
ToppCellLPS_IL1RA_TNF-Mesenchymal_fibroblastic-Fibroblasts-MatrixFB|LPS_IL1RA_TNF / Treatment groups by lineage, cell group, cell type

DST COL6A6 COL21A1 SRGAP1 ROBO1 PDZRN3

6.60e-0719969630d3e8c0681ec11f86dd38c5f48d21187a1b4f90
ToppCellLPS_anti-TNF-Mesenchymal_fibroblastic-Fibroblasts-MatrixFB|LPS_anti-TNF / Treatment groups by lineage, cell group, cell type

DST COL6A6 COL21A1 SRGAP1 ROBO1 PDZRN3

6.80e-072006969b0916d8d07ac2bf1739f7be5296bf77ffee6094
ToppCellKidney-Keratinocytes|Kidney / Skin and Kidney Cells in Lupus Nephritis Patients.

SH3RF2 HS3ST6 SLC45A1 CDC20 TRIM29 AHNAK2

6.80e-0720069641d83faa9f45ee7ea2ab19be8ecc6d2c5ac7fe5d
ToppCellBronchial-NucSeq-Stromal|NucSeq / Cell types per location group and 10X technology with lineage, and cell group designations

HOXB3 DST COL6A6 COL21A1 SRGAP1 PDZRN3

6.80e-07200696389cc775c8419d90fb77cd794376d2160a7bf44e
ToppCellParenchymal-NucSeq-Stromal|NucSeq / Cell types per location group and 10X technology with lineage, and cell group designations

HOXB3 DST COL6A6 COL21A1 SRGAP1 PDZRN3

6.80e-07200696cf433f9b43d7db07acaf70e060f8f77c974e72f3
ToppCellLPS_only-Mesenchymal_fibroblastic-Fibroblasts-MatrixFB|LPS_only / Treatment groups by lineage, cell group, cell type

DST TTC28 COL6A6 COL21A1 SRGAP1 PDZRN3

6.80e-07200696a7ef7022b8efcaedb7319b0b43d8c4e99d788fe2
ToppCellParenchymal-NucSeq-Stromal-Fibroblastic|NucSeq / Cell types per location group and 10X technology with lineage, and cell group designations

HOXB3 DST COL6A6 COL21A1 SRGAP1 PDZRN3

6.80e-07200696311fab076f2ceb258e3970eb21e39344b894042a
ToppCell10x5'-bone_marrow-Myeloid_Dendritic-DC1|bone_marrow / Manually curated celltypes from each tissue

DST SH3RF2 LINC02898 ROBO1 DMD

5.15e-061616952f068ee643de2f647c289779a6624265ab9a749b
ToppCellChildren_(3_yrs)-Mesenchymal-myofibroblast_cell-D139|Children_(3_yrs) / Lineage, Cell type, age group and donor

HOXB3 ROBO1 SPDYA DMD PDZRN3

5.98e-0616669594636dbc039f794c735960c3425e00bdd5523602
ToppCell5'-GW_trimst-2-SmallIntestine-Mesenchymal-fibroblastic-mLTo|GW_trimst-2 / Celltypes from developing, pediatric, Crohn's, & adult GI tract

COL6A6 MAPT LINC02898 DTL ROBO1

6.52e-06169695559e98216720e4babf0b0941100f1b485c35b11b
ToppCell3'-Parenchyma_lung-Mesenchymal-Mesenchymal_Myocytic-myocytic_fibroblast-Myofibroblasts-Myofibroblasts_L.2.3.2.2|3' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5

HOXB3 DST ROBO1 DMD PDZRN3

7.72e-061756951799a7be623dc3bf53ba580a7c47d2619969d708
ToppCellrenal_medulla_nuclei-Hypertensive_with+without-CKD-Epithelial-Collecting_tubule_epithelial_cell-kidney_collecting_duct_principal_cell-Cortical_Collecting_Duct_Principal_Cell|Hypertensive_with+without-CKD / Celltypes from Cells and Nuclei per compartment and clinical group

HOXB3 SHANK2 DTNB COBLL1 IGDCC3

8.85e-06180695023ec0b080c8a5cd0f36e83c6b17d4be3c01edb5
ToppCelldroplet-Liver-nan-3m-Endothelial-nan|Liver / Large_Intestine_Pancreas_Liver - method, tissue, subtissue, age, lineage, cell ontology and free annotation

HOXB3 TTC28 SRGAP1 ROBO1 MEX3B

9.10e-06181695fcc94f04dae98b817ec06b282d2e887804d37ae5
ToppCellFetal_29-31_weeks-Epithelial-alveolar_epithelial_cell_type_1/2_(AT1/AT2-like)-D088|Fetal_29-31_weeks / Lineage, Cell type, age group and donor

SHANK2 DTNB PPP1R13B FARSB PAWR

9.10e-06181695576da14ab3107f89e1f44a4a439d1bef5bb42370
ToppCellChildren_(3_yrs)-Mesenchymal-matrix_fibroblast_1_cell-D046|Children_(3_yrs) / Lineage, Cell type, age group and donor

COL6A6 COL21A1 SRGAP1 ROBO1 PDZRN3

9.10e-061816959ede19228ba5c0668a9c06c915510b95585216ef
ToppCellLV-15._Ventricular_Cardiomyocyte_III|LV / Chamber and Cluster_Paper

DST COL21A1 DMD RBM20 PDZRN3

9.85e-06184695ab7a1620c14a9d9b6be1b47c559931e345e9eef8
ToppCellAdult-Epithelial-alveolar_epithelial_cell_type_1-D175|Adult / Lineage, Cell type, age group and donor

DST SHANK2 SH3RF2 COBLL1 DMD

1.01e-0518569532b4e68e551d435a732f253f6ad83408c759a642
ToppCellCOVID-19-Fibroblasts-Airway_smooth_muscle|COVID-19 / group, cell type (main and fine annotations)

DST TTC28 DMD RBM20 PDZRN3

1.06e-05187695464a0c3b92b778911b5f9cd73642e09e3472063a
ToppCellRV-04._Ventricular_Cardiomyocyte_I|World / Chamber and Cluster_Paper

SH3RF2 PPP1R13B CFAP61 RBM20 PDZRN3

1.06e-0518769578cdcf8bc141d3b155c3c8af908431fc419c4d08
ToppCellControl-Endothelial-VE_Capillary_A|Endothelial / Disease state, Lineage and Cell class

ILDR2 COBLL1 SIPA1L2 PREX1 PDZRN3

1.09e-0518869588b3415e33db81726dd29c1f50c886e057af50a0
ToppCellPCW_13-14-Epithelial-Epithelial_airway-epi_proximal_progenitor1_(6)|PCW_13-14 / Celltypes from embryonic and fetal-stage human lung

SHANK2 COBLL1 PPP1R13B DMD OCLN

1.09e-051886950d86044bc340e3efb90d0022dd299873639d831c
ToppCellPCW_10-12-Epithelial-Epithelial_airway-epi_proximal_progenitor1_(6)|PCW_10-12 / Celltypes from embryonic and fetal-stage human lung

SHANK2 COBLL1 PPP1R13B DMD OCLN

1.09e-05188695beb2df2332a46cc81b10e8e29fc9829020111f03
ToppCellRV-04._Ventricular_Cardiomyocyte_I|RV / Chamber and Cluster_Paper

SH3RF2 PPP1R13B CFAP61 RBM20 PDZRN3

1.12e-051896959c1debd65c13d63fd4f3158917d621b44b714c26
ToppCellRV-06._Ventricular_Cardiomyocyte_II|World / Chamber and Cluster_Paper

PPP1R13B CFAP61 DMD RBM20 PDZRN3

1.12e-051896955e80c47f63980904c4c1ff02c201b67b456a0974
ToppCell10x5'v1-week_12-13-Mesenchymal_fibro-stroma-endosteal_fibroblast|week_12-13 / cell types per 3 fetal stages;per 3',per 5'

DST COL6A6 EBF3 COL21A1 PDZRN3

1.12e-05189695473b01c9162b12b90a617c600238436177a0d18d
ToppCellPCW_07-8.5-Epithelial-Epithelial_airway-epi_proximal_progenitor1_(6)|PCW_07-8.5 / Celltypes from embryonic and fetal-stage human lung

ILDR2 SHANK2 COBLL1 DMD OCLN

1.12e-051896957659c7bbd58ee959a159294fb8d17317bbcc5681
ToppCellLV-06._Ventricular_Cardiomyocyte_II|World / Chamber and Cluster_Paper

PPP1R13B CFAP61 DMD RBM20 PDZRN3

1.15e-05190695de5ef606a002f85c2e0e3a36c1f259d0b85a76ff
ToppCellNS-moderate-d_16-33-Epithelial-FOXN4+|d_16-33 / Location, Severity, dps_group, Lineage and Cell class of Upper airway (combined)

ALMS1 FAM161A DTL MUC12 CDC20

1.15e-05190695250ca4a605c1cccd77d23383e4fe6f91cf3609ba
ToppCellControl-Fibroblasts|Control / group, cell type (main and fine annotations)

DST COL6A6 COL21A1 ROBO1 PDZRN3

1.15e-051906953a42a9b98d954685d38a741f44545898d0e3e9ce
ToppCellRV-06._Ventricular_Cardiomyocyte_II|RV / Chamber and Cluster_Paper

DST PPP1R13B DMD RBM20 PDZRN3

1.15e-05190695fe8e78922c8ae928ef9a80bffd67868d5a87a091
ToppCellPCW_05-06-Epithelial-Epithelial_airway-epi_intermediate_(1)|PCW_05-06 / Celltypes from embryonic and fetal-stage human lung

ILDR2 SHANK2 COBLL1 DMD OCLN

1.18e-0519169572dbd2e0fabfca8d6f604df35277d3574739a0b3
ToppCellLPS-IL1RA+antiTNF-Stromal_mesenchymal-Matrix_Fibroblast-Activated_MatrixFB|LPS-IL1RA+antiTNF / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2

COL6A6 COL21A1 SRGAP1 ROBO1 PDZRN3

1.18e-05191695b13229bb7f3713a392271aaf5dbae3edd1b9fe5a
ToppCellLV-06._Ventricular_Cardiomyocyte_II|LV / Chamber and Cluster_Paper

DST PPP1R13B DMD RBM20 PDZRN3

1.18e-0519169525f3eb34f4e70761e81e84c8a5829f216108cbc6
ToppCellPCW_05-06-Epithelial-Epithelial_neuroendo-epi_NE_progenitor_(7)|PCW_05-06 / Celltypes from embryonic and fetal-stage human lung

ILDR2 SHANK2 COBLL1 DMD OCLN

1.18e-0519169505731ece7867659c662f952812805f947032fe10
ToppCellPCW_13-14-Epithelial-Epithelial_neuroendo-epi_NE_progenitor_(7)|PCW_13-14 / Celltypes from embryonic and fetal-stage human lung

SHANK2 COBLL1 PAWR DMD OCLN

1.18e-0519169563aa671837b79d2feb7ed1e67712cc01caf72bef
ToppCellnucseq-Mesenchymal-Fibroblastic-Fibroblastic_2-AF1|nucseq / Celltype signatures by Technology, Lineage, Lineage_subclass, Celltype_group, Cell_type2

DST COL6A6 COL21A1 ROBO1 PDZRN3

1.18e-051916956688cee34beee4f151ac17fccbc9c26a9aad72e1
ToppCellPCW_05-06-Epithelial-Epithelial_airway-epi_proximal_progenitor2_(4)|PCW_05-06 / Celltypes from embryonic and fetal-stage human lung

SHANK2 COBLL1 PAWR DMD OCLN

1.21e-05192695c15841f35e24d6ef6ce2a9a6dc62e66efdc3d9d5
ToppCellnucseq-Mesenchymal-Fibroblastic-Fibroblastic_2|nucseq / Celltype signatures by Technology, Lineage, Lineage_subclass, Celltype_group, Cell_type2

DST COL6A6 COL21A1 ROBO1 PDZRN3

1.21e-0519269599ce9e3c4c50cf64ebb62145f2b5420efa0db309
ToppCellAdult-Epithelial|Adult / Lineage, Cell type, age group and donor

SHANK2 COBLL1 PPP1R13B PAWR OCLN

1.21e-05192695efb962a5fd3b9bdfd8cf8d13c435e29c8271713e
ToppCellCOPD-Stromal-Myofibroblast|Stromal / Disease state, Lineage and Cell class

DST COL6A6 COL21A1 ROBO1 PDZRN3

1.21e-0519269562904f94dfce430456f05066522cbf9bd29f4d7e
ToppCellNS-moderate-d_0-4|moderate / Location, Severity, dps_group, Lineage and Cell class of Upper airway (combined)

MARCHF10 COL21A1 FAM161A HS3ST6 AHNAK2

1.24e-05193695ea345d34440b25f65358a53dc72831998d1c3620
ToppCellChildren_(3_yrs)-Mesenchymal-matrix_fibroblast_1_cell|Children_(3_yrs) / Lineage, Cell type, age group and donor

DST COL21A1 SRGAP1 ROBO1 PDZRN3

1.24e-0519369599525545552b371c86b18b6ea6f4897dc6e9a9ec
ToppCellLPS-IL1RA+antiTNF-Stromal_mesenchymal-Matrix_Fibroblast-MatrixFB|LPS-IL1RA+antiTNF / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2

COL6A6 COL21A1 SRGAP1 ROBO1 PDZRN3

1.24e-05193695fb28717fadd06c3840636d25409ce80c9254bd34
ToppCellPCW_05-06-Epithelial-Epithelial_airway|PCW_05-06 / Celltypes from embryonic and fetal-stage human lung

ILDR2 SHANK2 COBLL1 DMD OCLN

1.24e-05193695af6ec2c2ba92aef3e41531c3c7215b3300437bd9
ToppCellFetal_29-31_weeks-Mesenchymal-matrix_fibroblast_1_cell|Fetal_29-31_weeks / Lineage, Cell type, age group and donor

DST TTC28 COL21A1 SRGAP1 PDZRN3

1.27e-05194695011e14d9ed1393275f892060e7708ffadcd0767f
ToppCellmoderate-Epithelial-FOXN4+|moderate / Severity, Lineage and Cell class of Nasopharyngeal (NS) Samples from Patients and Controls

ALMS1 FAM161A DTL MUC12 CDC20

1.27e-051946955dffa578149104dda33774361e9e77b227b5f1ce
ToppCellLPS-antiTNF-Stromal_mesenchymal-Matrix_Fibroblast-MatrixFB|LPS-antiTNF / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2

COL6A6 COL21A1 SRGAP1 ROBO1 PDZRN3

1.27e-0519469560622bd2f75bfe4c37f721cb12f03dab33f2f58d
ToppCellFetal_29-31_weeks-Mesenchymal-matrix_fibroblast_1_cell-D062|Fetal_29-31_weeks / Lineage, Cell type, age group and donor

DST COL6A6 COL21A1 SRGAP1 PDZRN3

1.27e-0519469535f132cc38ac133be01834ed0946188aa0757eb4
ToppCelldroplet-Pancreas-Endocrine-21m-Epithelial|Pancreas / Large_Intestine_Pancreas_Liver - method, tissue, subtissue, age, lineage, cell ontology and free annotation

NCOR1 DST TTC28 SRSF11 HUWE1

1.27e-051946950b023de48ed8a550d169bbe954881eb04bf4f981
ToppCellmoderate-Epithelial-FOXN4+|Epithelial / Severity, Lineage and Cell class of Nasopharyngeal (NS) Samples from Patients and Controls

ALMS1 FAM161A DTL MUC12 CDC20

1.27e-05194695dff3fb10372053951d41e0ccd41aac3ece6009bd
ToppCellPCW_10-12-Epithelial-Epithelial_airway-epi_proximal_progenitor2_(4)|PCW_10-12 / Celltypes from embryonic and fetal-stage human lung

SHANK2 COBLL1 PAWR DMD OCLN

1.30e-05195695d673f8844896d5c7b76a7bc7f6b88a039f1bc263
ToppCellCOVID-19-Heart-CM_2|Heart / Disease (COVID-19 only), tissue and cell type

DST CFAP61 DMD RBM20 PDZRN3

1.30e-0519569575fc81bddb246dca3b437fb60827b1d4fe416405
ToppCelldroplet-Pancreas-PANCREAS-30m-Epithelial-pancreatic_B_cell|Pancreas / Large_Intestine_Pancreas_Liver - method, tissue, subtissue, age, lineage, cell ontology and free annotation

NCOR1 DST TTC28 COL6A6 HUWE1

1.30e-051956953e519cffa6144a62b06124642a14c9ff39b76554
ToppCelldroplet-Pancreas-PANCREAS-30m-Epithelial-pancreatic_B_cell|Pancreas / Large_Intestine_Pancreas_Liver - method, tissue, subtissue, age, lineage, cell ontology and free annotation

NCOR1 DST TTC28 COL6A6 HUWE1

1.30e-051956957796ea9247f4c63762f0de8490fed08b9717fa23
ToppCellPCW_10-12-Epithelial|PCW_10-12 / Celltypes from embryonic and fetal-stage human lung

SHANK2 COBLL1 PAWR DMD OCLN

1.34e-051966959bfb31ff3e4f2c0a9405c418c86bfec5dbca23e2
ToppCellPCW_13-14-Mesenchymal-Mesenchymal_fibroblastic|PCW_13-14 / Celltypes from embryonic and fetal-stage human lung

DST COL6A6 COL21A1 ROBO1 PDZRN3

1.34e-051966951450cb69c5bf469e97c03bf1890f6f7c54165b8a
ToppCellnucseq-Mesenchymal-Fibroblastic|nucseq / Celltype signatures by Technology, Lineage, Lineage_subclass, Celltype_group, Cell_type2

DST COL6A6 COL21A1 ROBO1 PDZRN3

1.34e-051966957d8505dac15fa59935ccf592afc54b04c4c6554f
ToppCellLPS_anti-TNF-Mesenchymal_fibroblastic-Fibroblasts-Activated_MatrixFB|LPS_anti-TNF / Treatment groups by lineage, cell group, cell type

DST COL6A6 COL21A1 SRGAP1 PDZRN3

1.37e-05197695fdb92985f7df0c280b87d3e43c2394e70786a2c7
ToppCellAdult-Mesenchymal|Adult / Lineage, Cell type, age group and donor

HOXB3 COL6A6 SRGAP1 ROBO1 PDZRN3

1.40e-0519869526e55b409db2a1637c95fae7c54b0abea1ef550c
ToppCellParenchymal-NucSeq|Parenchymal / Cell types per location group and 10X technology with lineage, and cell group designations

NF1 WWOX SHANK2 TTC28 DMD

1.40e-051986951996373bdccc55aac347d349bd22f6aad6d0c668
ToppCellCOVID-19-lung-Fibroblast|lung / Disease (COVID-19 only), tissue and cell type

DST COL6A6 SRGAP1 ROBO1 PDZRN3

1.40e-05198695df3de77216f5c5d6141ec44d01c56b942f611838
ToppCellPCW_10-12-Epithelial-Epithelial_airway|PCW_10-12 / Celltypes from embryonic and fetal-stage human lung

SHANK2 COBLL1 PAWR DMD OCLN

1.40e-051986959a12e5e47236433e512c668005fe3f8be6fde95c
ToppCellnucseq-Mesenchymal|nucseq / Celltype signatures by Technology, Lineage, Lineage_subclass, Celltype_group, Cell_type2

DST COL6A6 COL21A1 ROBO1 PDZRN3

1.40e-051986958f52243ca8b9ba68a75ae411506a3a6de258eb97
ToppCellBronchial-NucSeq-Epithelial|NucSeq / Cell types per location group and 10X technology with lineage, and cell group designations

CDKL5 SHANK2 COBLL1 PPP1R13B OCLN

1.44e-051996955f7da3eab58ace6cddb3179a415cd839d5767958
ToppCellBronchial-NucSeq-Epithelial-Epi_alveolar|NucSeq / Cell types per location group and 10X technology with lineage, and cell group designations

CDKL5 SHANK2 COBLL1 PPP1R13B OCLN

1.44e-05199695725610310e5c5fd7120c0be9acb55bf152026ddd
ToppCellParenchymal-NucSeq-Epithelial|NucSeq / Cell types per location group and 10X technology with lineage, and cell group designations

CDKL5 SHANK2 COBLL1 PPP1R13B OCLN

1.44e-051996955cea0d9e261903e0eaad60c28a07dff72ce65027
ToppCellLPS_IL1RA_TNF-Mesenchymal_fibroblastic-Fibroblasts-Activated_MatrixFB|LPS_IL1RA_TNF / Treatment groups by lineage, cell group, cell type

DST COL6A6 COL21A1 SRGAP1 PDZRN3

1.44e-05199695e1849505b92820a219c5a2c35492bdd55579fb48
ToppCellLPS_anti-TNF-Mesenchymal_fibroblastic-Fibroblasts|LPS_anti-TNF / Treatment groups by lineage, cell group, cell type

DST COL6A6 COL21A1 SRGAP1 PDZRN3

1.47e-05200695b79628fd1386aa9a3b0e9fa81def0bc100c3c073
ToppCellLPS_anti-TNF-Mesenchymal_fibroblastic|LPS_anti-TNF / Treatment groups by lineage, cell group, cell type

DST COL6A6 COL21A1 SRGAP1 PDZRN3

1.47e-0520069550ca6550998e461ef26dd670351060bd940765a8
ToppCellBronchial-NucSeq-Stromal-Fibroblastic|NucSeq / Cell types per location group and 10X technology with lineage, and cell group designations

DST COL6A6 SRGAP1 ROBO1 PDZRN3

1.47e-05200695cae972324d1dfea6efeaf6013f265c7c6bb48db4
ToppCellControl_saline-Mesenchymal_fibroblastic-Fibroblasts-MatrixFB|Control_saline / Treatment groups by lineage, cell group, cell type

DST COL6A6 COL21A1 ROBO1 PDZRN3

1.47e-05200695bd8cf33502adea320e91ca2af14e1911d88ad374
ToppCellControl-Epithelial_alveolar-Mes-Like-Differentiating_AT1|Control / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2

SH3RF2 RIMS1 OCLN RBM20

4.54e-05127694556aaf88719c83f307fa50dfac151136ed05c8ad
ToppCellPBMC-Severe-Myeloid-cDC-cDC-cDC_11|Severe / Location, Disease Group, Cell group, Cell class and sub_cluster (2021.03.09)

DST ROBO1 DMD AHNAK2

9.60e-051546945967a0a33456d5930fc492a700ebb015ac050abb
ToppCellPBMC-Severe-Myeloid-cDC-cDC-cDC_11|Severe / Location, Disease Group, Cell group, Cell class and sub_cluster (2021.03.01)

DST ROBO1 DMD AHNAK2

9.84e-05155694fab281db4c275d51240b122be78713c839ba5a95
ToppCellNS-moderate-d_07-13-Epithelial-FOXN4+|d_07-13 / Location, Severity, dps_group, Lineage and Cell class of Upper airway (combined)

ALMS1 FAM161A DTL CDC20

1.03e-04157694410c9d74a2085179cfb39853cb6d330fa98c9c1b
ToppCellrenal_medulla_nuclei-Adult_normal_reference-Epithelial-Renal_corpuscle_epithelial_cell-parietal_epithelial_cell|Adult_normal_reference / Celltypes from Cells and Nuclei per compartment and clinical group

ILDR2 PAWR SIPA1L2 MEX3B

1.06e-04158694e7db0ee4740e3c7a4d97d7cd7462e2c2ab458a4b
ToppCellrenal_medulla_nuclei-Adult_normal_reference-Epithelial-Renal_corpuscle_epithelial_cell-parietal_epithelial_cell-Parietal_Epithelial_Cell|Adult_normal_reference / Celltypes from Cells and Nuclei per compartment and clinical group

ILDR2 PAWR SIPA1L2 MEX3B

1.06e-04158694d39e020c3e77eb9d3de600a171d22f94357061d4
ToppCellPBMC-Mild-Lymphocyte-T/NK-CD4+_T-Treg-Treg_5|Mild / Location, Disease Group, Cell group, Cell class and sub_cluster (2021.03.01)

CDKL5 HOXB3 DTNB DMD

1.09e-0415969408a1cd71eac4322fb313324f74fe8e37998f2d7d
ToppCellPBMC-Mild-Lymphocyte-T/NK-CD4+_T-Treg-Treg_5|Mild / Location, Disease Group, Cell group, Cell class and sub_cluster (2021.03.09)

CDKL5 HOXB3 DTNB DMD

1.09e-041596949bdfa7f5aa7753fe25b787bd43d694b6093d77eb
ToppCellRV-13._Vascular_Smooth_Muscle|World / Chamber and Cluster_Paper

COBLL1 PAWR RIMS1 DMD

1.11e-0416069429c9b4770d0e73d59cffc7937b179484c76b6dcc
ComputationalIntermediate filaments and MT.

MAPT DTNB OCLN CDC20

1.24e-0468414MODULE_438
DrugRamipril [87333-19-5]; Down 200; 9.6uM; MCF7; HT_HG-U133A

NCOR1 ALMS1 MAPT ROBO1 SRSF11 AHDC1 PDZRN3

2.24e-061976976792_DN
Drughalofuginone lactate

DST SHANK2 COL21A1 PAWR DMD

6.00e-0685695CID000062891
Diseaseautism spectrum disorder (implicated_via_orthology)

SHANK2 ZNF280D SH3RF2 RIMS1 PREX1

2.73e-05152685DOID:0060041 (implicated_via_orthology)
Diseaserespiratory failure, COVID-19

DST MAPT CFAP61

4.10e-0529683EFO_0009686, MONDO_0100096
Diseaseretinal detachment, retinal break

SFSWAP MAPT TRIM29

7.27e-0535683EFO_0005773, EFO_0010698
DiseaseDisorder of eye

ALMS1 FAM161A RIMS1 TOPORS USH2A

1.32e-04212685C0015397
DiseaseUrologic Neoplasms

WWOX OGG1

1.45e-048682C0042076
DiseaseCancer of Urinary Tract

WWOX OGG1

1.45e-048682C0751571
Diseasetransient cerebral ischemia (biomarker_via_orthology)

NF1 ROBO1 PAWR OGG1

4.82e-04157684DOID:224 (biomarker_via_orthology)
Diseaseurate measurement, bone density

LATS2 WWOX TTC28 LINC02898 ROBO1 USH2A NUP153

5.54e-04619687EFO_0003923, EFO_0004531
DiseaseRetinitis pigmentosa

FAM161A TOPORS USH2A

6.75e-0474683cv:C0035334
Diseaselysophosphatidylcholine 22:6 measurement

WWOX SIPA1L2

7.82e-0418682EFO_0010365
DiseaseSplenomegaly

MAPT OCLN

1.17e-0322682C0038002
Diseasebreast cancer, COVID-19

TTC28 MAPT

1.17e-0322682MONDO_0007254, MONDO_0100096
Diseasemiddle cerebral artery infarction (biomarker_via_orthology)

MAPT PAWR OGG1

1.31e-0393683DOID:3525 (biomarker_via_orthology)
DiseaseCerebral Astrocytoma

NF1 LATS2

1.52e-0325682C0750935
DiseaseIntracranial Astrocytoma

NF1 LATS2

1.52e-0325682C0750936
DiseasePilocytic Astrocytoma

NF1 LATS2

1.52e-0325682C0334583
DiseaseAstrocytoma

NF1 LATS2

1.52e-0325682C0004114
DiseaseJuvenile Pilocytic Astrocytoma

NF1 LATS2

1.52e-0325682C0280783
DiseaseDiffuse Astrocytoma

NF1 LATS2

1.52e-0325682C0280785
DiseaseGrade I Astrocytoma

NF1 LATS2

1.52e-0325682C1704230
DiseaseSubependymal Giant Cell Astrocytoma

NF1 LATS2

1.52e-0325682C0205768
DiseaseMixed oligoastrocytoma

NF1 LATS2

1.52e-0325682C0547065
DiseaseChildhood Cerebral Astrocytoma

NF1 LATS2

1.52e-0325682C0338070
DiseaseGemistocytic astrocytoma

NF1 LATS2

1.64e-0326682C0334581
DiseaseProtoplasmic astrocytoma

NF1 LATS2

1.64e-0326682C0334580
DiseaseFibrillary Astrocytoma

NF1 LATS2

1.64e-0326682C0334582
DiseaseAnaplastic astrocytoma

NF1 LATS2

1.77e-0327682C0334579
DiseaseRetinitis Pigmentosa

FAM161A TOPORS USH2A

1.81e-03104683C0035334
Diseasefacial width measurement

LATS2 SFSWAP TRIM29

1.86e-03105683EFO_0007855
Diseasebone density

MAPT LINC02898 IBSP SPDYA MYO15A

2.03e-03388685EFO_0003923
DiseaseDevelopmental Academic Disorder

NF1 MAPT

2.04e-0329682C1330966
DiseaseLearning Disorders

NF1 MAPT

2.04e-0329682C0023186
DiseaseLearning Disturbance

NF1 MAPT

2.04e-0329682C0751263
DiseaseAdult Learning Disorders

NF1 MAPT

2.04e-0329682C0751262
DiseaseLearning Disabilities

NF1 MAPT

2.04e-0329682C0751265
Diseasealcohol consumption measurement

NF1 ALMS1 ZNF280D RBM27 MAPT COBLL1 PPP1R13B FARSB MYO15A

2.13e-031242689EFO_0007878
Diseaseintellectual disability (is_implicated_in)

CDKL5 DMD

2.18e-0330682DOID:1059 (is_implicated_in)
Diseaseforced expiratory volume

NCOR1 HOXB3 DST WWOX LINC02898 PREX1 RBM20

2.24e-03789687EFO_0004314

Protein segments in the cluster

PeptideGeneStartEntry
VQPFSKPGYITNSSR

ZNF280D

121

Q6N043
ATPGSSRKTCRYIPS

CDC20

156

Q12834
YSASFTTPTKPFRLQ

CFAP61

916

Q8NHU2
DRKTGIPTLPSTFYS

ALMS1

1416

Q8TCU4
SLAQGYERTSSPKPR

DMD

281

P11532
PIASKSFLYPGSSTR

DTL

256

Q9NZJ0
AASGYPSKRSTGPRQ

AHDC1

1256

Q5TGY3
RSRGSPSSTCVPYKV

CBY3

41

A6NI87
HRPTFTRSNTISKPY

COBLL1

266

Q53SF7
SPRKGPQTVNSSSIY

PPP1R13B

566

Q96KQ4
YIASVQGSTPSPRQK

RANBP2

11

P49792
NLGTSYVPIPARSFT

RBM20

481

Q5T481
PEAPSITSSGRSQYR

RBM27

491

Q9P2N5
SRSPTPSQKLGSAYL

PDZRN3

846

Q9UPQ7
RSPYSGPKFNSAIRG

RBM39

96

Q14498
QEPPRTVSGRYKSTT

PAWR

216

Q96IZ0
PRYSSGGNFETPSKR

OCLN

366

Q16625
KRSSSSLAPIGQPFY

PUM2

596

Q8TB72
YQTFPSGKRVSPQER

FAM166C

176

A6NJV1
LFYRPASKTSFTGPI

IGDCC3

556

Q8IVU1
GYGVQRSPSFQSKTP

LATS2

266

Q9NRM7
YLKGLFSSVPASRPS

MYO15A

3321

Q9UKN7
RKRFPASSLYPSGSQ

DST

7121

Q03001
PKQRRSFGSFPYTPS

KIAA1109

1356

Q2LD37
RYTAGSASPTPTFKT

KIAA1109

2596

Q2LD37
RTSPYPGSKVERSQV

NUDT9

66

Q9BW91
TVYRGDKSQASRPTP

OGG1

76

O15527
LSPGQERPYSTVRTK

PELP1

416

Q8IZL8
FRTSPGDRVTYTINP

HUWE1

4081

Q7Z6Z7
VPPVGYRSSARESKS

RIMS1

921

Q86UR5
GSNTDKQTLTTPPRY

ATMIN

276

O43313
SPPGSAASKRARTAY

HOXB3

181

P14651
RGPTSAVTKARTSYP

LINC02898

91

Q6ZV80
GLPPSYVFVSTQRFK

COL21A1

276

Q96P44
SSGVPTPTKRLQYSQ

DTNB

351

O60941
SGRPISPRSSVNSSY

MARCHF10

456

Q8NA82
SRNTSSVSPRGYVPS

EBF3

461

Q9H4W6
KARPIPRSTYGSTTN

FAM161A

356

Q3B820
DTIPQSSRSPSYRTK

CDKL5

471

O76039
SPLTPKYGSFISRDS

SLC45A1

376

Q9Y2W3
SFVSQYFSPTKGARP

COL6A6

706

A6NMZ7
YAQTLSKTPGLPSFR

HS3ST6

191

Q96QI5
GPYSTFLTSSPIRSR

ODF2

811

Q5BJF6
SITPTPGRKPFSSYR

MEX3B

271

Q6ZN04
PGRKPFSSYRNDSSS

MEX3B

276

Q6ZN04
SVPTPSRVRSLNGYS

USH2A

1956

O75445
PPTVTVYVKSGSNRS

SPDYA

11

Q5MJ70
PTAYRVSRSPGASRK

SFSWAP

826

Q12872
VRTSYQPSSPGRFTK

TRIM29

481

Q14134
DSPPIRRSTSSGQYT

SRGAP1

931

Q7Z6B7
TPVRTKTSNRYSPES

NCOR1

2091

O75376
YPKTTPSVGRSFSIR

PREX1

981

Q8TCU6
GTPCEYKTPFRRNTT

SIPA1L2

1051

Q9P2F8
PQVYRTTSPPFGKTT

IBSP

241

P21815
TLSGPFTYTAKRPSD

FARSB

166

Q9NSD9
AKTIGSYVPGPRSRS

SHANK2

461

Q9UPX8
PSYRASAPGKSIQAS

AHNAK2

3316

Q8IVF2
RSTGYSSQPGAKRPS

WASHC5

191

Q12768
SRSPNKQSGYSRPRA

SRRM5

596

B3KS81
PPKSYSTARRSRSAS

SRSF11

326

Q05519
PSKRSAQLGPRSASY

ILDR2

551

Q71H61
ATYPTVGQTSPRARK

NF1

2506

P21359
DNPTKPTTRQRYDGS

WWOX

96

Q9NZC7
PSSPKYVSSVTSRTG

MAPT

436

P10636
TYAGIRKVPSFTFTP

ROBO1

931

Q9Y6N7
PKPTSTYSLSSFFRG

VIPAS39

101

Q9H9C1
ATNRSVYFKPSLTPS

NUP153

376

P49790
PARSSSLPKVSSGYS

TTC28

2236

Q96AY4
SVYSPSGPVNRRTTT

TOPORS

191

Q9NS56
RVSTTYNKRPLPATS

ZCCHC9

6

Q8N567
RKTSSFPDSRSPGLY

SH3RF2

441

Q8TEC5
LSPQVSSSVVYGRSP

TLE2

376

Q04725
TFHSSPGYTKTTRLP

MUC12

366

Q9UKN1
PGYTKTTRLPDNTTT

MUC12

371

Q9UKN1