Cluster composition

Functions

CategoryNameIntersectionWithQueryPValueGenesInTermGenesInQueryGenesInTermInQueryID
GeneOntologyMolecularFunctionextracellular matrix structural constituent conferring tensile strength

COL4A3 COL4A6 COL6A3 COL7A1 COL9A1 COL11A2 COL12A1 COL19A1 COL5A3 COL24A1

7.04e-144611210GO:0030020
GeneOntologyMolecularFunctionextracellular matrix structural constituent

COL4A3 COL4A6 COL6A3 COL7A1 COL9A1 COL11A2 COL12A1 COL19A1 COL5A3 COL24A1

1.06e-0718811210GO:0005201
GeneOntologyCellularComponentcollagen trimer

COL4A3 COL4A6 C1QTNF8 COL6A3 COL7A1 COL9A1 COL11A2 COL12A1 COL19A1 COL26A1 SFTPD C1QTNF9B COL5A3 COL24A1 C1QTNF9

5.64e-198811015GO:0005581
GeneOntologyCellularComponentcomplex of collagen trimers

COL4A3 COL4A6 COL7A1 COL11A2 COL5A3

7.00e-08211105GO:0098644
GeneOntologyCellularComponentendoplasmic reticulum lumen

COL4A3 COL4A6 COL6A3 COL7A1 COL9A1 COL11A2 COL12A1 COL19A1 COL26A1 CANX COL5A3 COL24A1

1.85e-0733211012GO:0005788
GeneOntologyCellularComponentcollagen-containing extracellular matrix

COL4A3 COL4A6 COL6A3 COL7A1 COL9A1 COL11A2 COL12A1 COL19A1 COL26A1 SFTPD COL5A3 COL24A1

2.30e-0553011012GO:0062023
GeneOntologyCellularComponentanchoring collagen complex

COL7A1 COL12A1

8.20e-0531102GO:0030934
GeneOntologyCellularComponentmain axon

EPB41L3 ADAM22 KCNC2 KCNQ3 CNGA3

1.08e-04891105GO:0044304
GeneOntologyCellularComponentextracellular matrix

COL4A3 COL4A6 COL6A3 COL7A1 COL9A1 COL11A2 COL12A1 COL19A1 COL26A1 SFTPD COL5A3 COL24A1

1.76e-0465611012GO:0031012
GeneOntologyCellularComponentexternal encapsulating structure

COL4A3 COL4A6 COL6A3 COL7A1 COL9A1 COL11A2 COL12A1 COL19A1 COL26A1 SFTPD COL5A3 COL24A1

1.81e-0465811012GO:0030312
GeneOntologyCellularComponentpostsynapse

CUL3 GAP43 CANX TPPP EPB41L3 PICALM ADAM22 PRR12 KCNC2 NAPB KCNJ4 AFDN DGCR8 AKAP1 ATP2B1

2.86e-04101811015GO:0098794
GeneOntologyCellularComponenteukaryotic translation initiation factor 2 complex

EIF2S3B EIF2S3

4.06e-0461102GO:0005850
GeneOntologyCellularComponentFACIT collagen trimer

COL9A1 COL12A1

4.06e-0461102GO:0005593
GeneOntologyCellularComponentcollagen type IV trimer

COL4A3 COL4A6

4.06e-0461102GO:0005587
GeneOntologyCellularComponentneuronal cell body

MYO1A COPA GAP43 CANX PICALM ITPR3 KCNC2 KCNJ4 PVALB MAST1 KCNQ3 ATP2B1 CNGA3

4.46e-0483511013GO:0043025
GeneOntologyCellularComponentaxon initial segment

ADAM22 KCNQ3 CNGA3

4.69e-04291103GO:0043194
GeneOntologyCellularComponentbasement membrane collagen trimer

COL4A3 COL4A6

7.53e-0481102GO:0098651
GeneOntologyCellularComponentnetwork-forming collagen trimer

COL4A3 COL4A6

7.53e-0481102GO:0098642
GeneOntologyCellularComponentcollagen network

COL4A3 COL4A6

7.53e-0481102GO:0098645
GeneOntologyCellularComponentpresynaptic active zone membrane

CANX NAPB AFDN ATP2B1

7.67e-04781104GO:0048787
GeneOntologyCellularComponentaxon

MYO1A COPA GAP43 CANX EPB41L3 ADAM22 KCNC2 AVIL PVALB MAST1 KCNQ3 AFDN CNGA3

8.16e-0489111013GO:0030424
GeneOntologyCellularComponentcell body

MYO1A COPA GAP43 CANX PICALM ITPR3 KCNC2 KCNJ4 PVALB MAST1 KCNQ3 ATP2B1 CNGA3

1.19e-0392911013GO:0044297
GeneOntologyCellularComponentfibrillar collagen trimer

COL11A2 COL5A3

1.75e-03121102GO:0005583
GeneOntologyCellularComponentbanded collagen fibril

COL11A2 COL5A3

1.75e-03121102GO:0098643
GeneOntologyCellularComponentsomatodendritic compartment

MYO1A COPA GAP43 FAT3 CANX PICALM ITPR3 KCNC2 KCNJ4 PVALB MAST1 KCNQ3 AFDN ATP2B1 CNGA3

1.93e-03122811015GO:0036477
MousePhenodecreased dentate gyrus size

CUL3 DGCR8 KDM4B

1.56e-058933MP:0012460
MousePhenoabnormal corpus callosum morphology

CUL3 TMEM67 CANX CABLES1 ITPR3 MAST1 KDM4B

2.37e-05129937MP:0000780
MousePhenoabnormal dorsal telencephalic commissure morphology

CUL3 TMEM67 CANX CABLES1 ITPR3 MAST1 KDM4B

2.75e-05132937MP:0008219
MousePhenoabnormal nervous system tract morphology

CUL3 TMEM67 GAP43 CANX CABLES1 ITPR3 MAST1 KDM4B

3.68e-05189938MP:0000778
MousePhenoabnormal brain white matter morphology

CUL3 TMEM67 GAP43 CANX CABLES1 ITPR3 MAST1 KDM4B

6.77e-05206938MP:0008026
MousePhenoabnormal brain commissure morphology

CUL3 TMEM67 CANX CABLES1 ITPR3 MAST1 KDM4B

9.74e-05161937MP:0002199
DomainCollagen

COL4A3 COL4A6 C1QTNF8 COL6A3 COL7A1 COL9A1 COL11A2 COL12A1 COL19A1 COL26A1 SFTPD C1QTNF9B COL5A3 COL24A1 C1QTNF9

1.69e-188511015IPR008160
DomainCollagen

COL4A3 COL4A6 C1QTNF8 COL6A3 COL7A1 COL9A1 COL11A2 COL12A1 COL19A1 COL26A1 SFTPD C1QTNF9B COL5A3 COL24A1 C1QTNF9

1.69e-188511015PF01391
DomainTSPN

COL9A1 COL11A2 COL12A1 COL19A1 COL5A3 COL24A1

3.38e-09231106SM00210
DomainLaminin_G

COL9A1 COL11A2 COL12A1 COL19A1 FAT3 COL5A3 COL24A1

4.76e-08581107IPR001791
Domain-

COL9A1 COL11A2 COL12A1 COL19A1 FAT3 CANX COL5A3 COL24A1

8.89e-089511082.60.120.200
DomainNC1_FIB

COL11A2 COL5A3 COL24A1

3.17e-05111103PS51461
DomainFib_collagen_C

COL11A2 COL5A3 COL24A1

3.17e-05111103PD002078
DomainFib_collagen_C

COL11A2 COL5A3 COL24A1

3.17e-05111103IPR000885
DomainCOLFI

COL11A2 COL5A3 COL24A1

3.17e-05111103PF01410
DomainCOLFI

COL11A2 COL5A3 COL24A1

3.17e-05111103SM00038
DomainConA-like_dom

COL9A1 COL11A2 COL12A1 COL19A1 FAT3 CANX COL5A3 COL24A1

4.62e-052191108IPR013320
DomainLaminin_G_2

COL11A2 FAT3 COL5A3 COL24A1

8.84e-05401104PF02210
DomainTUDOR

SND1 AKAP1 KDM4B

3.23e-04231103PS50304
DomainC4

COL4A3 COL4A6

5.08e-0461102SM00111
DomainCollagen_VI_NC

COL4A3 COL4A6

5.08e-0461102IPR001442
DomainNC1_IV

COL4A3 COL4A6

5.08e-0461102PS51403
Domain-

COL4A3 COL4A6

5.08e-04611022.170.240.10
DomainC4

COL4A3 COL4A6

5.08e-0461102PF01413
DomainTUDOR

SND1 AKAP1 KDM4B

5.25e-04271103SM00333
DomainTudor

SND1 AKAP1 KDM4B

7.19e-04301103IPR002999
DomainC1Q

C1QTNF8 C1QTNF9B C1QTNF9

8.71e-04321103SM00110
DomainC1q

C1QTNF8 C1QTNF9B C1QTNF9

8.71e-04321103PF00386
DomainC1q_dom

C1QTNF8 C1QTNF9B C1QTNF9

1.04e-03341103IPR001073
DomainC1Q

C1QTNF8 C1QTNF9B C1QTNF9

1.04e-03341103PS50871
DomainPDZ

PRX AHNAK MAST1 AFDN AHNAK2

1.48e-031411105PF00595
DomainPDZ

PRX AHNAK MAST1 AFDN AHNAK2

1.83e-031481105SM00228
DomainPHD

RSF1 CHD3 KDM4B RAI1

1.89e-03891104SM00249
Domain-

PRX AHNAK MAST1 AFDN AHNAK2

1.95e-0315011052.30.42.10
DomainPDZ

PRX AHNAK MAST1 AFDN AHNAK2

2.00e-031511105PS50106
DomainZnf_PHD

RSF1 CHD3 KDM4B RAI1

2.05e-03911104IPR001965
DomainPDZ

PRX AHNAK MAST1 AFDN AHNAK2

2.06e-031521105IPR001478
DomainLamG

COL11A2 FAT3 COL5A3

2.21e-03441103SM00282
DomainZF_PHD_2

RSF1 CHD3 KDM4B RAI1

2.40e-03951104PS50016
DomainZF_PHD_1

RSF1 CHD3 KDM4B RAI1

2.50e-03961104PS01359
DomainTUDOR

SND1 AKAP1

2.99e-03141102PF00567
Domain-

C1QTNF8 C1QTNF9B C1QTNF9

3.19e-035011032.60.120.40
DomainVWA

COL6A3 COL7A1 COL12A1

4.39e-03561103PF00092
DomainIon_trans_dom

ITPR3 KCNC2 KCNQ3 CNGA3

4.63e-031141104IPR005821
DomainIon_trans

ITPR3 KCNC2 KCNQ3 CNGA3

4.63e-031141104PF00520
DomainTumour_necrosis_fac-like_dom

C1QTNF8 C1QTNF9B C1QTNF9

4.85e-03581103IPR008983
Domain-

COL6A3 COL7A1

4.95e-031811024.10.410.10
DomainPrtase_inh_Kunz-CS

COL6A3 COL7A1

4.95e-03181102IPR020901
DomainBPTI_KUNITZ_1

COL6A3 COL7A1

5.51e-03191102PS00280
DomainBPTI_KUNITZ_2

COL6A3 COL7A1

5.51e-03191102PS50279
DomainKunitz_BPTI

COL6A3 COL7A1

5.51e-03191102PF00014
PathwayREACTOME_COLLAGEN_CHAIN_TRIMERIZATION

COL4A3 COL4A6 COL6A3 COL7A1 COL9A1 COL11A2 COL12A1 COL19A1 COL26A1 COL5A3 COL24A1

1.67e-15448711M27812
PathwayREACTOME_COLLAGEN_CHAIN_TRIMERIZATION

COL4A3 COL4A6 COL6A3 COL7A1 COL9A1 COL11A2 COL12A1 COL19A1 COL26A1 COL5A3

4.51e-14418710MM15538
PathwayREACTOME_COLLAGEN_BIOSYNTHESIS_AND_MODIFYING_ENZYMES

COL4A3 COL4A6 COL6A3 COL7A1 COL9A1 COL11A2 COL12A1 COL19A1 COL26A1 COL5A3 COL24A1

2.50e-13678711M26999
PathwayREACTOME_COLLAGEN_BIOSYNTHESIS_AND_MODIFYING_ENZYMES

COL4A3 COL4A6 COL6A3 COL7A1 COL9A1 COL11A2 COL12A1 COL19A1 COL26A1 COL5A3

3.29e-12618710MM14637
PathwayREACTOME_COLLAGEN_DEGRADATION

COL4A3 COL4A6 COL6A3 COL7A1 COL9A1 COL11A2 COL12A1 COL19A1 COL26A1 COL5A3

5.44e-12648710M26953
PathwayREACTOME_COLLAGEN_FORMATION

COL4A3 COL4A6 COL6A3 COL7A1 COL9A1 COL11A2 COL12A1 COL19A1 COL26A1 COL5A3 COL24A1

7.22e-12908711M631
PathwayREACTOME_COLLAGEN_DEGRADATION

COL4A3 COL4A6 COL6A3 COL7A1 COL11A2 COL12A1 COL19A1 COL26A1 COL5A3

3.02e-1153879MM14566
PathwayREACTOME_COLLAGEN_FORMATION

COL4A3 COL4A6 COL6A3 COL7A1 COL9A1 COL11A2 COL12A1 COL19A1 COL26A1 COL5A3

3.23e-11768710MM14573
PathwayREACTOME_ASSEMBLY_OF_COLLAGEN_FIBRILS_AND_OTHER_MULTIMERIC_STRUCTURES

COL4A3 COL4A6 COL6A3 COL7A1 COL9A1 COL11A2 COL12A1 COL5A3 COL24A1

1.14e-1061879M27103
PathwayREACTOME_ASSEMBLY_OF_COLLAGEN_FIBRILS_AND_OTHER_MULTIMERIC_STRUCTURES

COL4A3 COL4A6 COL6A3 COL7A1 COL9A1 COL11A2 COL12A1 COL5A3

6.59e-1050878MM14796
PathwayPID_SYNDECAN_1_PATHWAY

COL4A3 COL4A6 COL6A3 COL7A1 COL9A1 COL11A2 COL12A1

1.18e-0846877M198
PathwayREACTOME_DEGRADATION_OF_THE_EXTRACELLULAR_MATRIX

COL4A3 COL4A6 COL6A3 COL7A1 COL9A1 COL11A2 COL12A1 COL19A1 COL26A1 COL5A3

1.41e-081408710M587
PathwayREACTOME_DEGRADATION_OF_THE_EXTRACELLULAR_MATRIX

COL4A3 COL4A6 COL6A3 COL7A1 COL11A2 COL12A1 COL19A1 COL26A1 COL5A3

3.25e-08114879MM14571
PathwayPID_AVB3_INTEGRIN_PATHWAY

COL4A3 COL4A6 COL6A3 COL7A1 COL9A1 COL11A2 COL12A1

3.44e-0774877M160
PathwayREACTOME_EXTRACELLULAR_MATRIX_ORGANIZATION

COL4A3 COL4A6 COL6A3 COL7A1 COL9A1 COL11A2 COL12A1 COL19A1 COL26A1 COL5A3 COL24A1

2.25e-063008711M610
PathwayREACTOME_EXTRACELLULAR_MATRIX_ORGANIZATION

COL4A3 COL4A6 COL6A3 COL7A1 COL9A1 COL11A2 COL12A1 COL19A1 COL26A1 COL5A3

4.11e-062588710MM14572
PathwayREACTOME_NCAM1_INTERACTIONS

COL4A3 COL6A3 COL9A1 COL5A3

6.08e-0620874MM15061
PathwayREACTOME_INTEGRIN_CELL_SURFACE_INTERACTIONS

COL4A3 COL4A6 COL6A3 COL7A1 COL9A1 COL5A3

7.18e-0676876MM14867
PathwayREACTOME_INTEGRIN_CELL_SURFACE_INTERACTIONS

COL4A3 COL4A6 COL6A3 COL7A1 COL9A1 COL5A3

1.37e-0585876M16441
PathwayREACTOME_NON_INTEGRIN_MEMBRANE_ECM_INTERACTIONS

COL4A3 COL4A6 COL11A2 COL5A3

4.26e-0532874MM14924
PathwayPID_INTEGRIN1_PATHWAY

COL4A3 COL4A6 COL6A3 COL7A1 COL11A2

5.30e-0566875M18
PathwayWP_VITAMIN_DSENSITIVE_CALCIUM_SIGNALING_IN_DEPRESSION

ITPR3 PVALB KCNQ3 ATP2B1

6.86e-0536874M39831
PathwayREACTOME_NCAM_SIGNALING_FOR_NEURITE_OUT_GROWTH

COL4A3 COL6A3 COL9A1 COL5A3

8.51e-0538874MM14969
PathwayREACTOME_ANCHORING_FIBRIL_FORMATION

COL4A3 COL4A6 COL7A1

9.79e-0515873M27161
PathwayREACTOME_ECM_PROTEOGLYCANS

COL4A3 COL4A6 COL6A3 COL9A1 COL5A3

1.04e-0476875M27219
PathwayREACTOME_NCAM1_INTERACTIONS

COL4A3 COL6A3 COL9A1 COL5A3

1.27e-0442874M7169
PathwayREACTOME_SIGNALING_BY_PDGF

COL4A3 COL6A3 COL9A1 COL5A3

4.17e-0457874MM14713
PathwayREACTOME_SIGNALING_BY_PDGF

COL4A3 COL6A3 COL9A1 COL5A3

4.45e-0458874M2049
PathwayREACTOME_NON_INTEGRIN_MEMBRANE_ECM_INTERACTIONS

COL4A3 COL4A6 COL11A2 COL5A3

4.76e-0459874M27218
PathwayREACTOME_NCAM_SIGNALING_FOR_NEURITE_OUT_GROWTH

COL4A3 COL6A3 COL9A1 COL5A3

6.11e-0463874M11187
PathwayREACTOME_MET_ACTIVATES_PTK2_SIGNALING

COL11A2 COL5A3 COL24A1

8.17e-0430873M27772
PathwayREACTOME_LAMININ_INTERACTIONS

COL4A3 COL4A6 COL7A1

8.17e-0430873M27216
PathwayWP_GLIAL_CELL_DIFFERENTIATION

GAP43 TPPP

1.03e-038872M39372
PathwayREACTOME_METABOLISM_OF_INGESTED_SEMET_SEC_MESEC_INTO_H2SE

HNMT NNMT

1.03e-038872M27169
PathwayWP_MIRNAS_AND_TFS_IN_IPS_CELL_GENERATION

PRPF4 DDX39B

1.03e-038872MM15855
PathwayWP_METHYLATION_PATHWAYS

HNMT NNMT

1.32e-039872M39493
PathwayREACTOME_RECYCLING_OF_EIF2_GDP

EIF2S3B EIF2S3

1.32e-039872MM15418
PathwayWP_METHYLATION

HNMT NNMT

1.32e-039872MM15836
PathwayBIOCARTA_NPP1_PATHWAY

COL4A3 COL4A6

1.64e-0310872M22040
PathwayBIOCARTA_NPP1_PATHWAY

COL4A3 COL4A6

1.64e-0310872MM1560
PathwayREACTOME_CELLULAR_RESPONSE_TO_MITOCHONDRIAL_STRESS

EIF2S3B EIF2S3

1.64e-0310872MM17234
PathwayBIOCARTA_EIF_PATHWAY

EIF2S3B EIF2S3

1.64e-0310872MM1394
PathwayBIOCARTA_EIF2_PATHWAY

EIF2S3B EIF2S3

1.64e-0310872MM1469
PathwayKEGG_ECM_RECEPTOR_INTERACTION

COL4A6 COL6A3 COL11A2 COL5A3

1.79e-0384874M7098
PathwayBIOCARTA_VITCB_PATHWAY

COL4A3 COL4A6

2.00e-0311872M15422
PathwayREACTOME_MET_PROMOTES_CELL_MOTILITY

COL11A2 COL5A3 COL24A1

2.04e-0341873M27778
PathwayBIOCARTA_VITCB_PATHWAY

COL4A3 COL4A6

2.39e-0312872MM1526
PathwayREACTOME_UNFOLDED_PROTEIN_RESPONSE_UPR

EIF2S3B EIF2S3

2.39e-0312872MM14981
PathwayBIOCARTA_ACE2_PATHWAY

COL4A3 COL4A6

2.81e-0313872MM1347
PathwayBIOCARTA_ACE2_PATHWAY

COL4A3 COL4A6

2.81e-0313872M12950
PathwayREACTOME_IRF3_MEDIATED_INDUCTION_OF_TYPE_I_IFN

PRKDC NLRC3

2.81e-0313872M27240
Pubmed

Synthetic Lethal and Resistance Interactions with BET Bromodomain Inhibitors in Triple-Negative Breast Cancer.

CUL3 COPA RSF1 CHD3 RABGAP1 BANF1 GMPS PPP1R8 SRRT MED4 SND1 ATG3 PRPF4 AHNAK NCAPD2 PRKDC NNMT TOP2B UBFD1 RAD21

8.48e-1110141122032416067
Pubmed

The Nse5/6-like SIMC1-SLF2 complex localizes SMC5/6 to viral replication centers.

RSF1 EIF2S3B GPATCH4 CHD3 EPB41L3 PICALM SRRT DCD PRPF4 EIF2S3 AHNAK HNRNPA0 AFDN DGCR8 PRKDC DDX39B TOP2B RAI1 RAD21

2.26e-109541121936373674
Pubmed

N-Terminal Acetyltransferase Naa40p Whereabouts Put into N-Terminal Proteoform Perspective.

RSF1 IST1 GPATCH4 CHD3 EPB41L3 PICALM GMPS KIAA1671 SND1 EIF2S3 AHNAK PRKDC AKAP1 TOP2B PRRC2B AHNAK2 UBFD1 RAD21

1.19e-099341121833916271
Pubmed

ISG15 Connects Autophagy and IFN-γ-Dependent Control of Toxoplasma gondii Infection in Human Cells.

COPA CANX PICALM SND1 ATG3 AHNAK PRKDC ATP2B1 DDX39B TOP2B AHNAK2

1.22e-092681121133024031
Pubmed

The Hsp70-Hsp90 co-chaperone Hop/Stip1 shifts the proteostatic balance from folding towards degradation.

COPA CANX PICALM GMPS SND1 DCD PRPF4 EIF2S3 NCAPD2 HNRNPA0 DYNC1LI1 PRKDC DDX39B TOP2B RAD21

2.32e-096381121533239621
Pubmed

ZZW-115-dependent inhibition of NUPR1 nuclear translocation sensitizes cancer cells to genotoxic agents.

COPA IST1 BANF1 ITPR3 KIAA1671 PPP1R8 SRRT SND1 PRPF4 EIF2S3 AHNAK HNRNPA0 PRKDC DDX39B TOP2B

3.66e-096601121532780723
Pubmed

KCTD13-mediated ubiquitination and degradation of GluN1 regulates excitatory synaptic transmission and seizure susceptibility.

CUL3 COPA GAP43 TPPP EIF2S3B CHD3 EPB41L3 ADAM22 SRRT NAPB SND1 EIF2S3 HNRNPA0 MAST1 KCNQ3 AFDN ACTL6B ALDH1B1 ATP2B1 DDX39B PRRC2B

5.49e-0914311122137142655
Pubmed

Direct interaction between hnRNP-M and CDC5L/PLRG1 proteins affects alternative splice site choice.

COPA CHD3 EPB41L3 PICALM DRG1 GMPS SND1 AHNAK NCAPD2 HNRNPA0 DYNC1LI1 PRKDC DDX39B RAD21

6.18e-095821121420467437
Pubmed

In-Depth In Vivo Crosslinking in Minutes by a Compact, Membrane-Permeable, and Alkynyl-Enrichable Crosslinker.

MYO1A COPA RSF1 HKDC1 CHD3 EPB41L3 ECE1 BANF1 PRX SND1 AHNAK AVIL NCAPD2 HNRNPA0 PRKDC ALDH1B1 ATP2B1 DDX39B TOP2B PRRC2B RAI1

6.27e-0914421122135575683
Pubmed

Identification of SUMO Binding Proteins Enriched after Covalent Photo-Cross-Linking.

COPA CHD3 SRRT SND1 AHNAK NCAPD2 HNRNPA0 PRKDC DDX39B AHNAK2 RAD21

1.13e-083321121132786267
Pubmed

Characterization of the Extracellular Matrix of Normal and Diseased Tissues Using Proteomics.

COL4A3 COL4A6 COL6A3 COL7A1 COL11A2 COL12A1 COL5A3 COL24A1

1.42e-08135112828675934
Pubmed

PRISMA and BioID disclose a motifs-based interactome of the intrinsically disordered transcription factor C/EBPα.

CUL3 CHD3 BANF1 DRG1 GMPS PRR12 MED4 SND1 DCD PRPF4 EIF2S3 HNRNPA0 DYNC1LI1 PRKDC TOP2B PRRC2B RAI1 RAD21

1.57e-0811031121834189442
Pubmed

The E3 ubiquitin ligase HECTD1 contributes to cell proliferation through an effect on mitosis.

CUL3 COPA GPATCH4 CHD3 DRG1 SRRT MED4 SND1 PRPF4 EIF2S3 DGCR8 PRKDC AKAP1 TOP2B RAD21

2.34e-087591121535915203
Pubmed

Functional proteomics establishes the interaction of SIRT7 with chromatin remodeling complexes and expands its role in regulation of RNA polymerase I transcription.

COPA CANX RSF1 EPB41L3 ITPR3 GMPS SND1 AHNAK NCAPD2 AFDN PRKDC PRRC2B RAI1 RAD21

2.61e-086531121422586326
Pubmed

Gain of Additional BIRC3 Protein Functions through 3'-UTR-Mediated Protein Complex Formation.

COPA CANX GPATCH4 EPB41L3 DRG1 SRRT SND1 DCD PRPF4 EIF2S3 NCAPD2 HNRNPA0 DYNC1LI1 AFDN PRKDC ALDH1B1 ATP2B1 DDX39B TOP2B RAD21

2.79e-0814251122030948266
Pubmed

Nell1-deficient mice have reduced expression of extracellular matrix proteins causing cranial and vertebral defects.

COL4A3 COL4A6 COL7A1 COL9A1 COL11A2 COL12A1 COL19A1 HKDC1 COL5A3

2.88e-08210112916537572
Pubmed

Identifying biological pathways that underlie primordial short stature using network analysis.

COPA CANX SUN1 CHD3 DRG1 ITPR3 KIAA1671 SRRT SND1 PRPF4 AHNAK HNRNPA0 AFDN PRKDC ATP2B1 DDX39B TOP2B

3.21e-0810241121724711643
Pubmed

Self-regulated alternative splicing at the AHNAK locus.

PRX AHNAK AHNAK2

3.25e-083112321940993
Pubmed

Extracellular matrix signatures of human primary metastatic colon cancers and their metastases to liver.

COL4A3 COL4A6 COL6A3 COL7A1 COL9A1 COL12A1 COL19A1 COL24A1

3.77e-08153112825037231
Pubmed

Proteomic profiling of VCP substrates links VCP to K6-linked ubiquitylation and c-Myc function.

COPA RSF1 GPATCH4 EPB41L3 GMPS SRRT SND1 DCD AHNAK NCAPD2 HNRNPA0 DYNC1LI1 AFDN PRKDC ALDH1B1 ATP2B1 DDX39B TOP2B AHNAK2

6.44e-0813531121929467282
Pubmed

Proteomic analysis of integrin-associated complexes identifies RCC2 as a dual regulator of Rac1 and Arf6.

COPA IST1 PICALM DRG1 GMPS SND1 PRPF4 EIF2S3 AHNAK HNRNPA0 AFDN PRKDC ALDH1B1 DDX39B

6.95e-087071121419738201
Pubmed

Quantitative proteomic profiling of the extracellular matrix of pancreatic islets during the angiogenic switch and insulinoma progression.

COL4A3 COL4A6 COL6A3 COL7A1 COL11A2 COL12A1 COL5A3 COL24A1

1.07e-07175112828071719
Pubmed

MYC multimers shield stalled replication forks from RNA polymerase.

COPA CANX SUN1 SRRT SND1 USP42 DCD EIF2S3 AHNAK HNRNPA0 DGCR8 PRKDC ALDH1B1 DDX39B TOP2B RAD21

1.20e-079891121636424410
Pubmed

Assembly of the U5 snRNP component PRPF8 is controlled by the HSP90/R2TP chaperones.

COPA CANX EIF2S3B GPATCH4 DRG1 GMPS SRRT SND1 DCD PRPF4 EIF2S3 AHNAK NCAPD2 HNRNPA0 PRKDC DDX39B TOP2B AHNAK2 RAD21

1.29e-0714151121928515276
Pubmed

CTRP8 and CTRP9B are novel proteins that hetero-oligomerize with C1q/TNF family members.

C1QTNF8 C1QTNF9B C1QTNF9

1.30e-074112319666007
Pubmed

Suppression of ACE2 SUMOylation protects against SARS-CoV-2 infection through TOLLIP-mediated selective autophagy.

COPA CANX CHD3 EPB41L3 DRG1 GMPS SRRT DCD EIF2S3 NCAPD2 HNRNPA0 PRKDC TOP2B

1.61e-076411121336057605
Pubmed

H4K20me0 recognition by BRCA1-BARD1 directs homologous recombination to sister chromatids.

ERF COPA GPATCH4 CHD3 BANF1 ITPR3 PRR12 SRRT MED4 USP42 PRPF4 AHNAK HNRNPA0 PRKDC DDX39B TOP2B RAI1 RAD21

1.72e-0712941121830804502
Pubmed

High-throughput analyses of hnRNP H1 dissects its multi-functional aspect.

ERF TSHZ2 CANX TPPP HKDC1 CHD3 PICALM OTUD7B PPP1R8 MED4 HOXC6 DMKN HNRNPA0 RUSC1-AS1 AKAP1 ATP2B1

1.85e-0710211121626760575
Pubmed

A high-throughput approach for measuring temporal changes in the interactome.

CUL3 COPA IST1 RABGAP1 GMPS SRRT SND1 ATG3 PRPF4 EIF2S3 AHNAK NCAPD2 HNRNPA0 DYNC1LI1 PRKDC ALDH1B1 DDX39B AHNAK2 UBFD1

1.98e-0714551121922863883
Pubmed

STUB1 is targeted by the SUMO-interacting motif of EBNA1 to maintain Epstein-Barr Virus latency.

ITPR3 SRRT SND1 DCD EIF2S3 NCAPD2 HNRNPA0 PRKDC

2.17e-07192112832176739
Pubmed

Wnt regulation: exploring Axin-Disheveled interactions and defining mechanisms by which the SCF E3 ubiquitin ligase is recruited to the destruction complex.

CUL3 COPA CANX DRG1 SRRT SND1 DCD EIF2S3 AHNAK NCAPD2 HNRNPA0 DYNC1LI1 PRKDC NLRC3

3.56e-078091121432129710
Pubmed

Proteome-wide identification of HSP70/HSC70 chaperone clients in human cells.

COPA CANX IST1 RABGAP1 AKR1A1 EPB41L3 DRG1 GMPS SND1 DCD AHNAK NCAPD2 AFDN PRKDC NNMT PRRC2B AHNAK2 RAD21

3.83e-0713671121832687490
Pubmed

Two-Dimensional Fractionation Method for Proteome-Wide Cross-Linking Mass Spectrometry Analysis.

COPA CANX HKDC1 CHD3 RABGAP1 BANF1 EIF2S3 NCAPD2 HNRNPA0 DYNC1LI1 PRKDC ATP2B1 DDX39B UBFD1

6.14e-078471121435235311
Pubmed

CHD3 and CHD4 form distinct NuRD complexes with different yet overlapping functionality.

CANX GPATCH4 CHD3 SRRT SND1 DCD PRPF4 HNRNPA0 PRKDC DDX39B TOP2B RAI1

6.26e-076051121228977666
Pubmed

Prohibitin 1 regulates tumor cell apoptosis via the interaction with X-linked inhibitor of apoptosis protein.

CUL3 COPA CANX GPATCH4 DRG1 SRRT EIF2S3 HNRNPA0 DYNC1LI1 PRKDC ALDH1B1 ATP2B1 DDX39B

6.46e-077251121327025967
Pubmed

A protein-interaction network of interferon-stimulated genes extends the innate immune system landscape.

COPA CANX PICALM BANF1 ITPR3 KIAA1671 SND1 EIF2S3 AHNAK NCAPD2 HNRNPA0 DYNC1LI1 PRKDC ALDH1B1 ATP2B1 TOP2B PRRC2B AHNAK2

8.11e-0714401121830833792
Pubmed

The matrisome: in silico definition and in vivo characterization by proteomics of normal and tumor extracellular matrices.

COL4A6 COL6A3 COL7A1 COL12A1 SFTPD COL5A3 COL24A1

1.23e-06167112722159717
Pubmed

Defining the proximal interaction networks of Arf GTPases reveals a mechanism for the regulation of PLD1 and PI4KB.

COL4A3 ERF GPATCH4 EPB41L3 OTUD7B KIAA1671 EIF2S3 AHNAK AFDN DGCR8 PRKDC AKAP1 PRRC2B

1.39e-067771121335844135
Pubmed

A Map of Human Mitochondrial Protein Interactions Linked to Neurodegeneration Reveals New Mechanisms of Redox Homeostasis and NF-κB Signaling.

COPA CANX IST1 PICALM BANF1 SRRT SND1 DCD ATG3 PRPF4 DYNC1LI1 DDX39B TOP2B

1.58e-067861121329128334
Pubmed

Proteomic characterization of human multiple myeloma bone marrow extracellular matrix.

COL4A3 COL4A6 COL7A1 COL11A2 COL5A3

1.77e-0662112528344315
Pubmed

E-cadherin interactome complexity and robustness resolved by quantitative proteomics.

IST1 EPB41L3 PICALM KIAA1671 SND1 EIF2S3 AHNAK AFDN ATP2B1 DDX39B UBFD1

2.26e-065651121125468996
Pubmed

Comparative proximity biotinylation implicates the small GTPase RAB18 in sterol mobilization and biosynthesis.

MFHAS1 SUN1 RABGAP1 EPB41L3 ITPR3 PIGC ATG3 AHNAK AKAP1 AHNAK2 UBFD1

2.37e-065681121137774976
Pubmed

Pro-prion, as a membrane adaptor protein for E3 ligase c-Cbl, facilitates the ubiquitination of IGF-1R, promoting melanoma metastasis.

CUL3 COL12A1 CANX RSF1 IST1 PICALM OTUD7B COL24A1 ZNHIT6 USP42 PRRC2B ZNF646

2.41e-066891121236543142
Pubmed

UM171 Preserves Epigenetic Marks that Are Reduced in Ex Vivo Culture of Human HSCs via Potentiation of the CLR3-KBTBD4 Complex.

CUL3 EPB41L3 PICALM AHNAK NCAPD2 AFDN PRKDC AKAP1

2.59e-06267112833417871
Pubmed

Targeting USP10 induces degradation of oncogenic ANLN in esophageal squamous cell carcinoma.

CUL3 COPA CANX DRG1 ITPR3 KIAA1671 SRRT SND1 DCD PRPF4 EIF2S3 AHNAK HNRNPA0 PRKDC DDX39B RAD21

2.81e-0612571121636526897
Pubmed

Systematic bromodomain protein screens identify homologous recombination and R-loop suppression pathways involved in genome integrity.

ERF FAT3 RSF1 GPATCH4 CHD3 EPB41L3 DRG1 KIAA1671 ZNHIT6 PRPF4 FMN2 ACTL6B PRRC2B RAI1 ZNF646

3.08e-0611161121531753913
Pubmed

BPA modulates the WDR5/TET2 complex to regulate ERβ expression in eutopic endometrium and drives the development of endometriosis.

COPA CANX DRG1 ITPR3 SRRT PRPF4 EIF2S3 HNRNPA0 AFDN PRKDC ALDH1B1 DDX39B

3.33e-067111121233022573
Pubmed

LRRC31 inhibits DNA repair and sensitizes breast cancer brain metastasis to radiation therapy.

COPA ITPR3 DCD AHNAK NCAPD2 PRKDC TOP2B

4.35e-06202112733005030
Pubmed

RSPO-LGR4 functions via IQGAP1 to potentiate Wnt signaling.

CANX CHD3 OTUD7B SRRT AFDN PRKDC ATP2B1

4.35e-06202112724639526
Pubmed

Tumor suppressor BAP1 nuclear import is governed by transportin-1.

CUL3 COPA CANX AKR1A1 BANF1 DRG1 GMPS SND1 EIF2S3 AHNAK NCAPD2 DYNC1LI1 AFDN PRKDC DDX39B

4.38e-0611491121535446349
Pubmed

Proteomic analysis of α4β1 integrin adhesion complexes reveals α-subunit-dependent protein recruitment.

COPA IST1 PICALM DRG1 GMPS SND1 HNRNPA0 AFDN PRKDC DDX39B

4.50e-064911121022623428
Pubmed

Systematic analysis of human protein complexes identifies chromosome segregation proteins.

CUL3 COPA CANX GPATCH4 PPP1R8 ZNHIT6 PRPF4 AHNAK HNRNPA0 DYNC1LI1 PRKDC DDX39B TOP2B PRRC2B RAD21

4.66e-0611551121520360068
Pubmed

BAP1 regulation of the key adaptor protein NCoR1 is critical for γ-globin gene repression.

COPA CANX GPATCH4 BANF1 DRG1 GMPS SND1 USP42 PRPF4 EIF2S3 AHNAK HNRNPA0 PRKDC DDX39B TOP2B RAD21

5.13e-0613181121630463901
Pubmed

Defining the membrane proteome of NK cells.

CUL3 COPA CANX ECE1 PICALM DRG1 ITPR3 MED4 AHNAK NCAPD2 DYNC1LI1 PRKDC AKAP1 ATP2B1 RAD21

5.33e-0611681121519946888
Pubmed

Phenotypic and Interaction Profiling of the Human Phosphatases Identifies Diverse Mitotic Regulators.

COPA CANX SUN1 BANF1 ITPR3 GMPS KIAA1671 PPP1R8 MED4 PRPF4 AHNAK FMN2 ATP2B1 PRRC2B

7.31e-0610491121427880917
Pubmed

Large-scale characterization of HeLa cell nuclear phosphoproteins.

CUL3 COPA CHD3 OTUD7B SRRT USP42 DYNC1LI1 AFDN PRKDC AKAP1 TOP2B KDM4B

7.85e-067741121215302935
Pubmed

Proteomic characterization of chromosomal common fragile site (CFS)-associated proteins uncovers ATRX as a regulator of CFS stability.

CANX SUN1 ITPR3 SRRT DCD AHNAK HNRNPA0 PRKDC DDX39B TOP2B RAD21

8.76e-066521121131180492
Pubmed

Nucleolar proteome dynamics.

GPATCH4 CHD3 BANF1 PRPF4 EIF2S3 HNRNPA0 PRKDC DDX39B TOP2B

9.03e-06419112915635413
Pubmed

Host E3 ligase HUWE1 attenuates the proapoptotic activity of the MERS-CoV accessory protein ORF3 by promoting its ubiquitin-dependent degradation.

CUL3 COPA CANX AKR1A1 DRG1 PPP1R8 SRRT EIF2S3 PRKDC ATP2B1

9.35e-065341121035032548
Pubmed

Cloning and characterization of Ehox, a novel homeobox gene essential for embryonic stem cell differentiation.

RHOXF2 RHOXF2B

1.03e-052112212087094
Pubmed

C1q-TNF-related protein-9, a novel cardioprotetcive cardiokine, requires proteolytic cleavage to generate a biologically active globular domain isoform.

C1QTNF9B C1QTNF9

1.03e-052112225783894
Pubmed

C1q/TNF-related proteins, a family of novel adipokines, induce vascular relaxation through the adiponectin receptor-1/AMPK/eNOS/nitric oxide signaling pathway.

C1QTNF9B C1QTNF9

1.03e-052112221836066
Pubmed

Targeted deletion of C1q/TNF-related protein 9 increases food intake, decreases insulin sensitivity, and promotes hepatic steatosis in mice.

C1QTNF9B C1QTNF9

1.03e-052112224473438
Pubmed

Adipose-derived factor CTRP9 attenuates vascular smooth muscle cell proliferation and neointimal formation.

C1QTNF9B C1QTNF9

1.03e-052112222972916
Pubmed

Globular CTRP9 inhibits oxLDL-induced inflammatory response in RAW 264.7 macrophages via AMPK activation.

C1QTNF9B C1QTNF9

1.03e-052112227188183
Pubmed

Ablation of Ctrp9, Ligand of AdipoR1, and Lower Number of Cone Photoreceptors in Mouse Retina.

C1QTNF9B C1QTNF9

1.03e-052112235575905
Pubmed

Overexpression of CTRP9 attenuates the development of atherosclerosis in apolipoprotein E-deficient mice.

C1QTNF9B C1QTNF9

1.03e-052112230426302
Pubmed

CTRP9 ameliorates cellular senescence via PGC‑1α/AMPK signaling in mesenchymal stem cells.

C1QTNF9B C1QTNF9

1.03e-052112229749459
Pubmed

The AHNAKs are a class of giant propeller-like proteins that associate with calcium channel proteins of cardiomyocytes and other cells.

AHNAK AHNAK2

1.03e-052112215007166
Pubmed

CTRP9 induces iNOS expression through JAK2/STAT3 pathway in Raw 264.7 and peritoneal macrophages.

C1QTNF9B C1QTNF9

1.03e-052112231837806
Pubmed

C1q/Tumor Necrosis Factor-Related Protein-9 Regulates the Fate of Implanted Mesenchymal Stem Cells and Mobilizes Their Protective Effects Against Ischemic Heart Injury via Multiple Novel Signaling Pathways.

C1QTNF9B C1QTNF9

1.03e-052112228978553
Pubmed

C1q/Tumor Necrosis Factor-Related Protein-9 Attenuates Diabetic Nephropathy and Kidney Fibrosis in db/db Mice.

C1QTNF9B C1QTNF9

1.03e-052112232283037
Pubmed

C1q-TNF-Related Protein-9 Promotes Cardiac Hypertrophy and Failure.

C1QTNF9B C1QTNF9

1.03e-052112227821723
Pubmed

Identification of a tandem duplicated array in the Rhox alpha locus on mouse chromosome X.

RHOXF2 RHOXF2B

1.03e-052112216465597
Pubmed

Cloning and characterization of the 5'-flanking region of the Ehox gene.

RHOXF2 RHOXF2B

1.03e-052112216414020
Pubmed

C1q/tumour necrosis factor-related protein-9 aggravates lipopolysaccharide-induced inflammation via promoting NLRP3 inflammasome activation.

C1QTNF9B C1QTNF9

1.03e-052112235008006
Pubmed

C1q/tumor necrosis factor-related protein-9, a novel adipocyte-derived cytokine, attenuates adverse remodeling in the ischemic mouse heart via protein kinase A activation.

C1QTNF9B C1QTNF9

1.03e-052112224030394
Pubmed

C1q and Tumor Necrosis Factor Related Protein 9 Protects from Diabetic Cardiomyopathy by Alleviating Cardiac Insulin Resistance and Inflammation.

C1QTNF9B C1QTNF9

1.03e-052112236766785
Pubmed

Hypermethylation of the CTRP9 promoter region promotes Hcy induced VSMC lipid deposition and foam cell formation via negatively regulating ER stress.

C1QTNF9B C1QTNF9

1.03e-052112237945738
Pubmed

CTRP9 protein protects against myocardial injury following ischemia-reperfusion through AMP-activated protein kinase (AMPK)-dependent mechanism.

C1QTNF9B C1QTNF9

1.03e-052112222514273
Pubmed

CTRP 9 mitigates the apoptosis and unfolded protein response of OGD/R-induced retinal ganglion cells by regulating the AMPK pathway.

C1QTNF9B C1QTNF9

1.03e-052112238741428
Pubmed

Autoantibodies Against β1-Adrenoceptor Exaggerated Ventricular Remodeling by Inhibiting CTRP9 Expression.

C1QTNF9B C1QTNF9

1.03e-052112230764693
Pubmed

Complete primary structure of two splice variants of collagen XII, and assignment of alpha 1(XII) collagen (COL12A1), alpha 1(IX) collagen (COL9A1), and alpha 1(XIX) collagen (COL19A1) to human chromosome 6q12-q13.

COL12A1 COL19A1

1.03e-05211229143499
Pubmed

CTRP9 Regulates Growth, Differentiation, and Apoptosis in Human Keratinocytes through TGFβ1-p38-Dependent Pathway.

C1QTNF9B C1QTNF9

1.03e-052112229145717
Pubmed

AHNAK1 and AHNAK2 are costameric proteins: AHNAK1 affects transverse skeletal muscle fiber stiffness.

AHNAK AHNAK2

1.03e-052112220833135
Pubmed

C1q/TNF-Related Protein 9 (CTRP9) attenuates hepatic steatosis via the autophagy-mediated inhibition of endoplasmic reticulum stress.

C1QTNF9B C1QTNF9

1.03e-052112226419929
Pubmed

Ubiquitous expression of the alpha1(XIX) collagen gene (Col19a1) during mouse embryogenesis becomes restricted to a few tissues in the adult organism.

COL9A1 COL19A1

1.03e-05211229202028
Pubmed

Association of C1q/TNF-Related Protein-9 (CTRP9) Level with Obstructive Sleep Apnea in Patients with Coronary Artery Disease.

C1QTNF9B C1QTNF9

1.03e-052112232831639
Pubmed

Rhox homeobox gene cluster: recent duplication of three family members.

RHOXF2 RHOXF2B

1.03e-052112216496311
Pubmed

CTRP9 Promotes Brown Adipose Tissue Lipolysis in Mice Fed a High-Fat Diet.

C1QTNF9B C1QTNF9

1.03e-052112238940054
Pubmed

Reduction of CTRP9, a novel anti-platelet adipokine, contributes to abnormal platelet activity in diabetic animals.

C1QTNF9B C1QTNF9

1.03e-052112226754066
Pubmed

CTRP9 alleviates foam cells apoptosis by enhancing cholesterol efflux.

C1QTNF9B C1QTNF9

1.03e-052112233352225
Pubmed

Sexually dimorphic expression of the X-linked gene Eif2s3x mRNA but not protein in mouse brain.

EIF2S3B EIF2S3

1.03e-052112216325480
Pubmed

METTL3 protects METTL14 from STUB1-mediated degradation to maintain m6 A homeostasis.

COL6A3 COPA DRG1 SND1 NCAPD2 PRKDC TOP2B

1.04e-05231112736597993
Pubmed

TBK1 phosphorylation activates LIR-dependent degradation of the inflammation repressor TNIP1.

COPA CANX EIF2S3B GPATCH4 ITPR3 ZNHIT6 SND1 DCD EIF2S3 AHNAK HNRNPA0 PRKDC DDX39B

1.21e-059491121336574265
Pubmed

The Catalytically Inactive Mutation of the Ubiquitin-Conjugating Enzyme CDC34 Affects its Stability and Cell Proliferation.

COPA CANX GMPS NCAPD2 DYNC1LI1 PRKDC RAD21

1.23e-05237112729564676
Pubmed

C9orf72 protein quality control by UBR5-mediated heterotypic ubiquitin chains.

CUL3 COPA CANX EIF2S3B DRG1 GMPS ZNHIT6 SND1 DCD EIF2S3 HNRNPA0 DYNC1LI1 PRKDC ALDH1B1 DDX39B

1.27e-0512571121537317656
Pubmed

The RNA binding protein MEX3A promotes tumor progression of breast cancer by post-transcriptional regulation of IGFBP4.

COPA CHD3 KCNJ4 AHNAK PRKDC DDX39B PRRC2B AHNAK2

1.27e-05332112837433992
Pubmed

Genome-wide CRISPR-Cas9 Screen Identifies Leukemia-Specific Dependence on a Pre-mRNA Metabolic Pathway Regulated by DCPS.

COPA CANX RSF1 DCD AHNAK HNRNPA0 PRKDC TOP2B

1.51e-05340112829478914
Pubmed

PRP19 transforms into a sensor of RPA-ssDNA after DNA damage and drives ATR activation via a ubiquitin-mediated circuitry.

COPA CANX MED4 AHNAK HNRNPA0 PRKDC TOP2B RAD21

1.51e-05340112824332808
InteractionACE2 interactions

COPA CANX CHD3 RABGAP1 EPB41L3 PICALM BANF1 CABLES1 DRG1 GMPS SRRT ZNHIT6 DCD EIF2S3 NCAPD2 HNRNPA0 MAST1 PRKDC DDX39B TOP2B PRRC2B AHNAK2

1.56e-07110611222int:ACE2
InteractionCIT interactions

CUL3 COPA CANX SUN1 RSF1 EIF2S3B GPATCH4 CHD3 AKR1A1 PICALM BANF1 DRG1 ITPR3 KIAA1671 SND1 DCD PRPF4 AHNAK HNRNPA0 PRKDC DDX39B TOP2B AHNAK2 RAD21

1.11e-06145011224int:CIT
InteractionNAA40 interactions

CUL3 RSF1 IST1 GPATCH4 CHD3 EPB41L3 PICALM GMPS KIAA1671 SND1 EIF2S3 AHNAK PRKDC AKAP1 TOP2B PRRC2B AHNAK2 UBFD1 RAD21

1.76e-0697811219int:NAA40
InteractionUHRF2 interactions

CUL3 RSF1 CHD3 GMPS AHNAK HNRNPA0 PRKDC TOP2B KDM4B

1.77e-062001129int:UHRF2
InteractionSMC5 interactions

RSF1 EIF2S3B GPATCH4 CHD3 EPB41L3 PICALM SRRT DCD PRPF4 EIF2S3 AHNAK HNRNPA0 AFDN DGCR8 PRKDC DDX39B TOP2B RAI1 RAD21

2.44e-06100011219int:SMC5
InteractionFN1 interactions

COL4A3 COL4A6 COL7A1 COL9A1 IST1 PICALM DRG1 GMPS SND1 PRPF4 EIF2S3 AHNAK HNRNPA0 AFDN PRKDC ALDH1B1 DDX39B

4.36e-0684811217int:FN1
InteractionSUMO2 interactions

CUL3 COPA CHD3 SRRT SND1 DCD AHNAK NCAPD2 HNRNPA0 PRKDC DDX39B TOP2B AHNAK2 RAD21

5.11e-0659111214int:SUMO2
InteractionNUPR1 interactions

COPA IST1 BANF1 ITPR3 KIAA1671 PPP1R8 SRRT SND1 PRPF4 EIF2S3 AHNAK HNRNPA0 PRKDC DDX39B TOP2B

5.72e-0668311215int:NUPR1
InteractionPLOD3 interactions

CUL3 COL4A6 C1QTNF8 COL12A1 RHOXF2 C1QTNF9B AHNAK PRRC2B

8.44e-061831128int:PLOD3
InteractionSTIP1 interactions

COPA CANX PICALM GMPS SND1 DCD PRPF4 EIF2S3 AHNAK NCAPD2 HNRNPA0 DYNC1LI1 PRKDC ALDH1B1 AKAP1 DDX39B TOP2B RAD21

1.06e-05100611218int:STIP1
InteractionMETTL14 interactions

COL6A3 ERICH3 COPA CANX BANF1 DRG1 SND1 DCD AHNAK NCAPD2 PRKDC DDX39B TOP2B

1.36e-0555811213int:METTL14
InteractionWDR11 interactions

CUL3 COPA RSF1 DRG1 SRRT ATG3 DYNC1LI1

1.59e-051441127int:WDR11
InteractionEIF3C interactions

CUL3 COPA RSF1 CHD3 DRG1 EIF2S3 AKAP1 PRRC2B RAD21

1.63e-052631129int:EIF3C
InteractionPOU5F1 interactions

COPA CHD3 ITPR3 SND1 USP42 AHNAK NCAPD2 DYNC1LI1 AFDN PRKDC TOP2B PRRC2B RAD21

2.19e-0558411213int:POU5F1
InteractionHECTD1 interactions

CUL3 COPA GPATCH4 CHD3 EPB41L3 DRG1 SRRT MED4 SND1 PRPF4 EIF2S3 NCAPD2 DGCR8 PRKDC AKAP1 TOP2B RAD21

3.00e-0598411217int:HECTD1
InteractionEFTUD2 interactions

CUL3 COPA CANX SUN1 GPATCH4 CHD3 DRG1 GMPS SRRT SND1 DCD PRPF4 EIF2S3 AHNAK NCAPD2 HNRNPA0 PRKDC DDX39B TOP2B AHNAK2 RAD21

4.32e-05144911221int:EFTUD2
InteractionDHX38 interactions

CUL3 COPA RSF1 CHD3 SRRT PRKDC DDX39B

4.63e-051701127int:DHX38
InteractionANAPC2 interactions

CUL3 COPA IST1 CABLES1 DRG1 KIAA1671 EIF2S3 PRKDC

4.94e-052341128int:ANAPC2
InteractionCHD4 interactions

CUL3 CANX RSF1 CHD3 BANF1 SRRT DCD PRPF4 AHNAK NCAPD2 HNRNPA0 PRKDC DDX39B TOP2B RAI1 RAD21

6.12e-0593811216int:CHD4
InteractionSIRT7 interactions

COPA CANX RSF1 EPB41L3 ITPR3 GMPS SND1 AHNAK NCAPD2 AFDN PRKDC PRRC2B RAI1 RAD21

6.54e-0574411214int:SIRT7
InteractionSNW1 interactions

CUL3 COPA CHD3 RABGAP1 PICALM DRG1 SND1 PRPF4 AHNAK NCAPD2 HNRNPA0 PRKDC DDX39B RAD21

6.82e-0574711214int:SNW1
InteractionKBTBD4 interactions

CUL3 EPB41L3 PICALM PM20D2 AHNAK NCAPD2 AFDN PRKDC AKAP1

6.83e-053161129int:KBTBD4
InteractionKCTD13 interactions

CUL3 COPA GAP43 TPPP CHD3 EPB41L3 ADAM22 SRRT NAPB SND1 EIF2S3 HNRNPA0 MAST1 KCNQ3 AFDN ACTL6B ALDH1B1 ATP2B1 DDX39B PRRC2B

7.78e-05139411220int:KCTD13
InteractionHOXC4 interactions

RABGAP1 MAST1 PRKDC PBX3

8.60e-05421124int:HOXC4
InteractionHDAC2 interactions

CUL3 COPA CANX CHD3 BANF1 PPP1R8 DCD PRPF4 AHNAK NCAPD2 PRKDC TOP2B RAI1 AHNAK2 RAD21

8.83e-0586511215int:HDAC2
InteractionAMPD1 interactions

CUL3 XIRP2 C1QTNF9

8.88e-05161123int:AMPD1
InteractionUNK interactions

CUL3 COPA PICALM KIAA1671 SND1 EIF2S3 ATP2B1 TOP2B PRRC2B RAD21

9.35e-0540811210int:UNK
InteractionISG15 interactions

COPA CANX IST1 PICALM SND1 AHNAK PRKDC ATP2B1 DDX39B TOP2B AHNAK2

9.71e-0549411211int:ISG15
InteractionASB3 interactions

ERF EPB41L3 KIAA1671 ZNHIT6 TOP2B

1.05e-04841125int:ASB3
InteractionMTNR1B interactions

CUL3 COPA CANX ITPR3 HNRNPA0 PRKDC

1.08e-041351126int:MTNR1B
InteractionAKAP1 interactions

CUL3 TMEM67 CANX SUN1 CABLES1 DRG1 ITPR3 EIF2S3 NCAPD2 AKAP1 ATP2B1

1.14e-0450311211int:AKAP1
InteractionECT2 interactions

MYO1A COPA GPATCH4 PICALM BANF1 KIAA1671 PRR12 SRRT AHNAK NCAPD2 HNRNPA0 PRKDC ALDH1B1 TOP2B AHNAK2

1.17e-0488711215int:ECT2
InteractionRPS11 interactions

CUL3 EIF2S3B CHD3 DRG1 ITPR3 SND1 ATG3 EIF2S3 PRKDC PRRC2B RAD21

1.18e-0450511211int:RPS11
InteractionTOP1 interactions

CUL3 RSF1 CHD3 BANF1 PPP1R8 SRRT PRPF4 HNRNPA0 PRKDC ALDH1B1 DDX39B TOP2B RAI1

1.30e-0469611213int:TOP1
InteractionLRRC31 interactions

COPA ITPR3 DCD AHNAK NCAPD2 PRKDC TOP2B

1.50e-042051127int:LRRC31
InteractionCPPED1 interactions

PICALM ALDH1B1 AHNAK2

1.52e-04191123int:CPPED1
InteractionLAIR2 interactions

COL4A6 COL6A3 COL12A1 COL26A1

1.58e-04491124int:LAIR2
InteractionTNFAIP8L1 interactions

CANX EPB41L3 MED4 PRKDC

1.58e-04491124int:TNFAIP8L1
InteractionCEBPA interactions

CUL3 CHD3 BANF1 DRG1 GMPS PRR12 MED4 SND1 DCD PRPF4 EIF2S3 HNRNPA0 DYNC1LI1 PRKDC TOP2B PRRC2B RAI1 RAD21

1.69e-04124511218int:CEBPA
InteractionC1QTNF9B interactions

COL12A1 ERF C1QTNF9B C1QTNF9

1.85e-04511124int:C1QTNF9B
InteractionCLK1 interactions

CUL3 MFHAS1 ECE1 HNMT PRPF4 HNRNPA0 PRKDC

2.24e-042191127int:CLK1
InteractionPLOD1 interactions

CUL3 COL4A6 COL12A1 CANX AHNAK ALDH1B1 AKAP1 PRRC2B

2.28e-042921128int:PLOD1
InteractionCUL7 interactions

CUL3 COPA CANX EPB41L3 DRG1 SRRT SND1 PRPF4 AHNAK HNRNPA0 AFDN PRKDC DDX39B TOP2B

2.47e-0484511214int:CUL7
InteractionSPART interactions

CUL3 COPA OTUD7B DPH5 AKAP1

2.75e-041031125int:SPART
InteractionCDC5L interactions

CUL3 COPA CHD3 EPB41L3 PICALM DRG1 GMPS PPP1R8 AHNAK NCAPD2 DYNC1LI1 MAST1 PRKDC DDX39B

2.78e-0485511214int:CDC5L
InteractionUBE2I interactions

CUL3 TSHZ2 RHOXF2 CANX CHD3 DRG1 SND1 PRKDC DDX39B TOP2B UBFD1 ZNF646

2.82e-0465411212int:UBE2I
InteractionCCDC8 interactions

COPA CANX CHD3 DRG1 ITPR3 KIAA1671 SND1 AHNAK HNRNPA0 AFDN PRKDC ATP2B1

2.90e-0465611212int:CCDC8
InteractionCYP2C9 interactions

CANX SUN1 ITPR3 MAST1 ATP2B1

3.01e-041051125int:CYP2C9
InteractionVCAM1 interactions

COPA IST1 PICALM DRG1 GMPS SND1 HNRNPA0 AFDN PRKDC DDX39B

3.19e-0447511210int:VCAM1
Cytoband6q12-q13

COL12A1 COL19A1

6.08e-05511426q12-q13
Cytoband7q21

ADAM22 SRRT

4.68e-041311427q21
Cytoband1p22.3

COL24A1 ZNHIT6

1.37e-032211421p22.3
Cytoband13q12.12

C1QTNF9B C1QTNF9

1.49e-0323114213q12.12
Cytoband8q24

KCNQ3 RAD21

2.21e-032811428q24
Cytoband12q14.1

KCNC2 AVIL

2.21e-0328114212q14.1
GeneFamilyCollagens

COL4A3 COL4A6 COL6A3 COL7A1 COL9A1 COL11A2 COL12A1 COL19A1 COL26A1 COL5A3 COL24A1

2.15e-17467211490
GeneFamilyEndogenous ligands|C1q and TNF related

C1QTNF8 C1QTNF9B C1QTNF9

4.73e-05187231372
GeneFamilyCollagens|Collagen proteoglycans

COL9A1 COL12A1

1.55e-045722575
GeneFamilyPDZ domain containing

PRX AHNAK MAST1 AFDN AHNAK2

3.50e-041527251220
GeneFamilyTudor domain containing

SND1 AKAP1 KDM4B

4.27e-0437723780
CoexpressionNABA_COLLAGENS

COL4A3 COL4A6 COL6A3 COL7A1 COL9A1 COL11A2 COL12A1 COL19A1 COL26A1 COL5A3 COL24A1

2.97e-174311311MM17060
CoexpressionNABA_COLLAGENS

COL4A3 COL4A6 COL6A3 COL7A1 COL9A1 COL11A2 COL12A1 COL19A1 COL26A1 COL5A3 COL24A1

3.95e-174411311M3005
CoexpressionNABA_CORE_MATRISOME

COL4A3 COL4A6 COL6A3 COL7A1 COL9A1 COL11A2 COL12A1 COL19A1 COL26A1 COL5A3 COL24A1

2.60e-0827011311MM17057
CoexpressionNABA_CORE_MATRISOME

COL4A3 COL4A6 COL6A3 COL7A1 COL9A1 COL11A2 COL12A1 COL19A1 COL26A1 COL5A3 COL24A1

3.14e-0827511311M5884
CoexpressionNABA_MATRISOME

COL4A3 COL4A6 C1QTNF8 COL6A3 COL7A1 COL9A1 COL11A2 COL12A1 COL19A1 COL26A1 SFTPD C1QTNF9B COL5A3 ADAM22 COL24A1 C1QTNF9

8.51e-06102611316M5889
CoexpressionNABA_MATRISOME

COL4A3 COL4A6 COL6A3 COL7A1 COL9A1 COL11A2 COL12A1 COL19A1 COL26A1 SFTPD C1QTNF9B COL5A3 ADAM22 COL24A1 C1QTNF9

2.87e-05100811315MM17056
CoexpressionMANNO_MIDBRAIN_NEUROTYPES_HDA1

GAP43 TSHZ2 FAT3 TPPP CHD3 ADAM22 NAPB MAST1 KCNQ3 ACTL6B PBX3

4.57e-0558411311M39068
CoexpressionFIGUEROA_AML_METHYLATION_CLUSTER_1_DN

AHNAK ENTPD6 KDM4B AHNAK2

4.65e-05461134M2161
ToppCell10x5'v1-week_14-16-Mesenchymal_fibro-stroma-endosteal_fibroblast|week_14-16 / cell types per 3 fetal stages;per 3',per 5'

COL6A3 COL9A1 COL12A1 GAP43 TSHZ2 PCDHB3 DMKN NNMT

2.97e-08191112844b1f62fdee03b157fe545f2ae6ff84f8929a8ac
ToppCellRV-01._Fibroblast_I|RV / Chamber and Cluster_Paper

COL4A3 COL6A3 COL12A1 TSHZ2 COL5A3 ECE1 COL24A1 NNMT

3.09e-081921128356160b113c3305a61ceeaff33ce3c9da0be2878
ToppCellwk_15-18-Mesenchymal-Chondrocyte-ASPN+_chondrocyte|wk_15-18 / Celltypes from embryonic and fetal-stage human lung

COL9A1 COL11A2 COL12A1 DMKN AVIL PBX3 AHNAK2

3.44e-071781127a55130670aa95a87b833dd3cd2de461d779e4c06
ToppCellLV-01._Fibroblast_I|LV / Chamber and Cluster_Paper

COL4A3 COL6A3 COL12A1 TSHZ2 COL5A3 ECE1 NNMT

5.94e-071931127dc17f3b9758936d428cf17f77a1ce6d4c479b165
ToppCellRA-02._Fibroblast_II|RA / Chamber and Cluster_Paper

COL4A3 COL6A3 TSHZ2 COL5A3 ECE1 COL24A1 NNMT

6.36e-0719511276a02ebbeb3199447ddce64d92d8809436e040eba
ToppCell3'-Pediatric_IBD-SmallIntestine-Mesenchymal-fibroblastic-Stromal_2_(NPY+)|Pediatric_IBD / Celltypes from developing, pediatric, Crohn's, & adult GI tract

COL4A6 COL6A3 COL9A1 COL12A1 TSHZ2 DMKN NNMT

7.29e-071991127ec74ff85d6b61013b1f785b2fca343759feb7843
ToppCellkidney_cells-Hypertensive_with+without-CKD-Epithelial-Intermediate_tubule_epithelial_cell|Hypertensive_with+without-CKD / Celltypes from Cells and Nuclei per compartment and clinical group

COL4A3 COL7A1 COL26A1 ITPR3 SLC12A1 DMKN NNMT

7.29e-0719911272e7f517c0444b4f29ff11c26ab32e9cc0f7e99ef
ToppCell10x3'2.3-week_17-19-Mesenchymal_fibro-stroma|week_17-19 / cell types per 3 fetal stages;per 3',per 5'

COL6A3 COL12A1 GAP43 TSHZ2 COL5A3 DMKN AHNAK2

7.54e-072001127747c61d4e0b746278ae1f45ca4cd556c6961c76a
ToppCell10x3'2.3-week_17-19-Mesenchymal_fibro|week_17-19 / cell types per 3 fetal stages;per 3',per 5'

COL6A3 COL12A1 GAP43 TSHZ2 COL5A3 DMKN AHNAK2

7.54e-072001127de1d193f773f4e2927baa6fc38d29754b015c6e6
ToppCellnormal_Lung-Fibroblasts-Myofibroblasts|Fibroblasts / Location, Cell class and cell subclass

COL6A3 COL7A1 COL9A1 COL12A1 EIF2S3B COL24A1

3.72e-0616411269b4a6007abae992db871d9f6f731d5af724de30d
ToppCell10x5'v1-week_12-13-Mesenchymal_osteo-stroma-osteochondral_precursor|week_12-13 / cell types per 3 fetal stages;per 3',per 5'

COL6A3 COL7A1 COL5A3 SLC7A8 HOXC6 NNMT

6.15e-06179112698c0c5c8034ae8a4b3ceea7fd1d0386ee5f89d09
ToppCellrenal_medulla_nuclei-Hypertensive_with+without-CKD-Epithelial-Distal_tubule_epithelial_cell-kidney_loop_of_Henle_thick_ascending_limb_epithelial_cell-Macula_Densa_Cell|Hypertensive_with+without-CKD / Celltypes from Cells and Nuclei per compartment and clinical group

COL4A3 ERICH3 MFHAS1 HKDC1 ITPR3 SLC12A1

6.56e-06181112622363c5835dd6cef8f895ab9362e0837d92b15b1
ToppCellFetal_29-31_weeks-Mesenchymal-myofibroblast_cell-D088|Fetal_29-31_weeks / Lineage, Cell type, age group and donor

COL7A1 COL12A1 TSHZ2 ECE1 COL24A1 PBX3

6.77e-061821126ed6ae0fd8653f213fe29906a6a4e0729a62e1b75
ToppCellfacs-Thymus-Thymus_Epithelium-18m-Lymphocytic-thymocyte|Thymus / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation

COL9A1 COL12A1 COL19A1 FAT3 COL24A1 XIRP2

7.20e-0618411262cbed6462fea2622871bb7e49b0df3d984239281
ToppCellnormal_Lung-Fibroblasts-Myofibroblasts|normal_Lung / Location, Cell class and cell subclass

COL6A3 COL7A1 COL9A1 COL12A1 GAP43 COL24A1

7.20e-0618411260b336489c10e8c3c957795dd845454f03404382b
ToppCellfacs-Thymus-Thymus_Epithelium-18m-Lymphocytic|Thymus / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation

COL9A1 COL12A1 COL19A1 FAT3 COL24A1 XIRP2

7.20e-061841126ea7a7e2bac46d4d2c31a5d576b38a032b5335062
ToppCellfacs-Thymus-Thymus_Epithelium-18m-Lymphocytic-proliferating_thymocyte;_DN_to_DP_transition,_dividing_(some_are_Cd8+/_Cd4+,_some_undergoing_VDJ_recombination)|Thymus / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation

COL9A1 COL12A1 COL19A1 FAT3 COL24A1 XIRP2

7.20e-0618411262b19a8c5f823e00812908b23e66bb4e563278aff
ToppCellLPS-antiTNF-Stromal_mesenchymal-Lung_smooth_muscle-MatrixFB_->_Myofibroblast|LPS-antiTNF / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2

COL6A3 COL9A1 TSHZ2 ADAM22 COL24A1 AHNAK2

7.43e-0618511266712512100ccef456d2e2bd201d0987986c92ac9
ToppCellLV-01._Fibroblast_I|World / Chamber and Cluster_Paper

COL4A3 COL6A3 COL12A1 TSHZ2 COL5A3 NNMT

8.65e-06190112612992ec80a7b4f4f17de693f0719ee061a9918fd
ToppCell10x5'v1-week_12-13-Mesenchymal_fibro-stroma|week_12-13 / cell types per 3 fetal stages;per 3',per 5'

COL6A3 COL12A1 GAP43 TSHZ2 PCDHB3 COL5A3

9.18e-0619211264ed5040594ba2d0639f0990697504ecef872ca70
ToppCell10x5'v1-week_12-13-Mesenchymal_fibro|week_12-13 / cell types per 3 fetal stages;per 3',per 5'

COL6A3 COL12A1 GAP43 TSHZ2 PCDHB3 COL5A3

9.18e-061921126d4f5d6653564c2c5d0f5f7c932d89cb1b1412844
ToppCellFetal_29-31_weeks-Mesenchymal-myofibroblast_cell-D150|Fetal_29-31_weeks / Lineage, Cell type, age group and donor

COL6A3 COL12A1 TSHZ2 FAT3 COL24A1 PBX3

9.18e-06192112672881b280a415e65f87a80ca1369cbb0b722a0c4
ToppCellBrain_organoid-organoid_Kanton_Nature-Organoid-1M-Mesenchymal|Organoid-1M / Sample Type, Dataset, Time_group, and Cell type.

COL6A3 COL11A2 COL12A1 COL19A1 HNMT ITPR3

9.46e-061931126e1de67ddada87229f5db0ec193a6da8745a86a64
ToppCellBrain_organoid-organoid_Kanton_Nature-Organoid-1M-Mesenchymal-choroid_plexus/mesenchymal-like_cells|Organoid-1M / Sample Type, Dataset, Time_group, and Cell type.

COL6A3 COL11A2 COL12A1 COL19A1 HNMT ITPR3

9.46e-061931126b6f5a85210e60798205eaf5884cdb540f549d08a
ToppCellLV-02._Fibroblast_II|LV / Chamber and Cluster_Paper

COL4A3 COL6A3 COL12A1 TSHZ2 ECE1 NNMT

9.74e-061941126014d2feb5db2a6a35ef759761a41e466e108c3c1
ToppCellLA-02._Fibroblast_II|World / Chamber and Cluster_Paper

COL4A3 COL6A3 COL12A1 TSHZ2 ECE1 NNMT

1.00e-051951126a78b605b49acd8c9d68716266ca269dafcd910b9
ToppCellRA-02._Fibroblast_II|World / Chamber and Cluster_Paper

COL4A3 COL6A3 TSHZ2 ECE1 COL24A1 NNMT

1.03e-051961126e8cbda03837f1f26470a9d93aa7fdaa04e08e38a
ToppCellAT2_cells-SSc-ILD_01|World / lung cells shred on cell class, cell subclass, sample id

SFTPD CHD3 ITPR3 DMKN KCNQ3 NNMT

1.06e-05197112642e49a8ce3118db6c2fd620d70c480b75143c828
ToppCell3'-Child04-06-SmallIntestine-Mesenchymal-fibroblastic-Stromal_2_(NPY+)|Child04-06 / Celltypes from developing, pediatric, Crohn's, & adult GI tract

COL4A6 COL6A3 COL12A1 TSHZ2 DMKN NNMT

1.06e-05197112669fde2d27881f8408216e231c71cfdbd96f28d45
ToppCellILEUM-non-inflamed-(8)_Fibroblast-(8)_Smooth_muscle_cells|(8)_Fibroblast / shred on tissue, inflammation_status, cell class(v3), cell subclass (v2)

COL4A6 TSHZ2 ADAM22 DMKN ALDH1B1 AHNAK2

1.06e-0519711264e0c3ea4f4a04a41532806edf3bccf7845c86fa5
ToppCellPCW_13-14-Mesenchymal-Mesenchymal_fibroblastic-mes_immature1_(0)|PCW_13-14 / Celltypes from embryonic and fetal-stage human lung

COL6A3 TSHZ2 FAT3 SLC7A8 COL24A1 AFDN

1.06e-0519711260034bae02ee7fcfea520d453ca3c842ab6963b12
ToppCell10x_3'_v2v3-Non-neoplastic-Vascular-Mural_cell-SMC_COL|10x_3'_v2v3 / Platform, Oncotype, Lineage, Cell_class, celltype (level4), mutation group

COL6A3 COL7A1 COL12A1 COL5A3 ECE1 NNMT

1.09e-0519811268b9e8eaeffda40912a0163fdf39b93bc5e64751c
ToppCell5'-GW_trimst-2-SmallIntestine-Mesenchymal-fibroblastic-Stromal_3_(KCNN3+)|GW_trimst-2 / Celltypes from developing, pediatric, Crohn's, & adult GI tract

COL6A3 TSHZ2 HOXC6 DMKN PBX3 CNGA3

1.09e-05198112612cd9f0bbad8dce5199ebfed1c4a8080710ca055
ToppCell10x_3'_v2v3-Non-neoplastic-Vascular-Mural_cell-SMC_COL-F|10x_3'_v2v3 / Platform, Oncotype, Lineage, Cell_class, celltype (level4), mutation group

COL6A3 COL7A1 COL12A1 COL5A3 ECE1 NNMT

1.09e-051981126eb78b2ae6a787dbc75947e8dd5a03693285bc8be
ToppCellBronchial_Biopsy|World / Tissue, Lineage and Cell class of Lung Cells from 10X

COL4A6 COL7A1 TSHZ2 ECE1 KIAA1671 AHNAK2

1.09e-051981126f5b7013045b61fc56894f80092f799770dde1c8f
ToppCell3'-GW_trimst-1.5-SmallIntestine-Mesenchymal-fibroblastic|GW_trimst-1.5 / Celltypes from developing, pediatric, Crohn's, & adult GI tract

COL6A3 COL9A1 TSHZ2 HNMT HOXC6 DMKN

1.13e-051991126137ff58897e6ada8a5a70205f66fe9110795506b
ToppCell10x3'2.3-week_12-13-Mesenchymal_fibro-stroma|week_12-13 / cell types per 3 fetal stages;per 3',per 5'

COL6A3 COL12A1 GAP43 TSHZ2 COL5A3 HOXC6

1.16e-05200112664d2941689d7ca8af54f9ba21c5aeabf719084ef
ToppCell10x3'2.3-week_12-13-Mesenchymal_fibro|week_12-13 / cell types per 3 fetal stages;per 3',per 5'

COL6A3 COL12A1 GAP43 TSHZ2 COL5A3 HOXC6

1.16e-05200112676f3043cb88071256ff661885fe5a82a54f5b733
ToppCellLPS_only-Epithelial_alveolar-AT_2-Differentiating_AT1|LPS_only / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2

COL4A6 SFTPD EPB41L3 ACTL6B NNMT

1.74e-0512711255b0adbcafad31a6759c9bdce2f7f9591a8edc450
ToppCellCerebellum-Endothelial-ENDOTHELIAL_TIP-Dcn_1|Cerebellum / BrainAtlas - Mouse McCarroll V32

COL4A6 COL6A3 COL12A1 COL26A1 NNMT

2.26e-051341125d29ac8152dc581c0da2430d06cd259ac0eded808
ToppCellCerebellum-Endothelial-ENDOTHELIAL_TIP-Dcn_1-Dcn_1_1|Cerebellum / BrainAtlas - Mouse McCarroll V32

COL4A6 COL6A3 COL12A1 COL26A1 NNMT

2.26e-051341125459c39df15d3cf9144ce7827e8d14830d31353bb
ToppCellCerebellum-Endothelial-ENDOTHELIAL_TIP-Dcn_1-Dcn_1_1-Endothelial_Tip.Dcn.Apod_(Apod)-|Cerebellum / BrainAtlas - Mouse McCarroll V32

COL4A6 COL6A3 COL12A1 COL26A1 NNMT

2.26e-051341125d065449ca3679e4818b74fb7302cc7f1ce62f691
ToppCellCerebellum-Endothelial-ENDOTHELIAL_TIP-Dcn_1-Dcn_1_1-Endothelial_Tip.Dcn.Apod_(Apod)|Cerebellum / BrainAtlas - Mouse McCarroll V32

COL4A6 COL6A3 COL12A1 COL26A1 NNMT

2.26e-0513411250be389f416818a22e80098dd809fdf45b14171e8
ToppCellControl-Epithelial_alveolar-AT_1-AT2_Progenitor|Control / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2

COL4A6 SFTPD EPB41L3 HNMT XIRP2

2.98e-05142112594e277f038f4006d99ff50222b0f5cf89bc3d46d
ToppCellPBMC_fresh-frozen-Severe-critical_progression_d03-09-Lymphocytic-Lymphocytic_T-CD8-positive,_alpha-beta_T_cell-T_CD8_c12-MKI67-TYROBP|Severe-critical_progression_d03-09 / Compartment, severity and other cell annotations on 10x 3' data (130k)

ERICH3 ADAM22 KCNC2 NAPB NNMT

3.52e-051471125c0f62ed3312a33921476e89844486e09326485b7
ToppCellCerebellum-Endothelial-ENDOTHELIAL_TIP|Cerebellum / BrainAtlas - Mouse McCarroll V32

COL4A6 COL6A3 COL12A1 COL26A1 AHNAK2

3.76e-0514911253980fa4f1986a2f164a1826ea043fb71f1d756cd
ToppCellfacs-Marrow-B-cells-24m-Lymphocytic-precursor_B_cell|Marrow / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation

COL9A1 COL12A1 FAT3 COL24A1 SLC12A1

5.27e-051601125c381ec6be8cf887861cc18f831a20db42f953fe1
ToppCellfacs-Marrow-B-cells-24m-Lymphocytic-pre_B_cell|Marrow / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation

COL9A1 COL12A1 FAT3 COL24A1 SLC12A1

5.27e-05160112525c8f3d2a6d14ff0ca0b965fce89d3ff22f40585
ToppCell5'-Adult-SmallIntestine-Mesenchymal-fibroblastic-Stromal_2_(NPY+)|Adult / Celltypes from developing, pediatric, Crohn's, & adult GI tract

COL9A1 COL12A1 GAP43 HOXC6 KCNQ3

5.93e-051641125a764b79a127c8f360af0b79a1da64658badf0dfa
ToppCellPND01-Mesenchymal-Mesenchymal_structural-Fibroblastic-AF2-AF2_prolif|PND01 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif

COL6A3 COL12A1 CABLES1 NCAPD2 NNMT

6.28e-05166112549103b75c3e08656c5774f56fd00d7bd53eefcfb
ToppCellRA-01._Fibroblast_I|RA / Chamber and Cluster_Paper

COL4A3 COL6A3 TSHZ2 COL5A3 COL24A1

6.83e-0516911256373562ab3b1765060212a6a53d6543e7e942e80
ToppCelldroplet-Liver-LIVER_NPC-30m-Myeloid-Kupffer_cell|Liver / Large_Intestine_Pancreas_Liver - method, tissue, subtissue, age, lineage, cell ontology and free annotation

COL4A6 MYO1A EPB41L3 ITPR3 SLC7A8

7.03e-051701125a121e10099faaeb60251eec162f38caf7c4238c2
ToppCellrenal_papilla_nuclei-Adult_normal_reference-Epithelial-Intermediate_tubule_epithelial_cell-kidney_loop_of_Henle_thick_ascending_limb_epithelial_cell|Adult_normal_reference / Celltypes from Cells and Nuclei per compartment and clinical group

MFHAS1 HKDC1 KCNQ3 NNMT AHNAK2

7.43e-0517211250c2d0bb767e5ce089b42ad49e8b303a103de2d5c
ToppCellAT1-AT2_cells-Cryobiopsy_01|World / lung cells shred on cell class, cell subclass, sample id

COL12A1 CHD3 ECE1 C1QTNF9 KCNQ3

7.43e-0517211250be41df5d35d818deb7316ac21c9366eb4b7bfd1
ToppCellwk_08-11-Mesenchymal-Chondrocyte-intermediate_chondrocyte|wk_08-11 / Celltypes from embryonic and fetal-stage human lung

COL9A1 COL11A2 EIF2S3B PICALM PBX3

7.43e-051721125415d57aa6278b8c12e7a2cf9c3fa5283389fb9b0
ToppCellrenal_papilla_nuclei-Adult_normal_reference-Epithelial-Intermediate_tubule_epithelial_cell-kidney_loop_of_Henle_thick_ascending_limb_epithelial_cell-Adaptive_/_Maladaptive_/_Repairing_Thick_Ascending_Limb_Cell|Adult_normal_reference / Celltypes from Cells and Nuclei per compartment and clinical group

MFHAS1 HKDC1 KCNQ3 NNMT AHNAK2

7.43e-051721125eeed177a03c116e9815a8e086d24efc9643b16a4
ToppCellControl-Epithelial_cells-AT1|Control / group, cell type (main and fine annotations)

COL4A3 COL12A1 EPB41L3 OTUD7B AFDN

7.84e-051741125548d7f2b958a2bfd2c95eb049ceaab55a559c77d
ToppCelldroplet-Liver-LIVER_NPC-30m-Myeloid-Kupffer_cell|Liver / Large_Intestine_Pancreas_Liver - method, tissue, subtissue, age, lineage, cell ontology and free annotation

COL4A6 MYO1A EPB41L3 ITPR3 SLC7A8

8.06e-051751125f7cd2ef79d91d64976fcdb5f1e7343b24ba27456
ToppCell3'-Child09-12-SmallIntestine-Mesenchymal-myocytic-myofibroblast_(RSPO2+)|Child09-12 / Celltypes from developing, pediatric, Crohn's, & adult GI tract

COL19A1 SFTPD PCDHB3 FMN2 AHNAK2

8.28e-051761125a8875b4ba4abf6625cdeb67bf544ce1573c59060
ToppCell10x3'2.3-week_17-19-Mesenchymal_osteo-stroma-chondrocyte|week_17-19 / cell types per 3 fetal stages;per 3',per 5'

C1QTNF8 COL9A1 COL11A2 COL12A1 DMKN

8.50e-051771125915b848d789051a1c3bc6f6dc86955bb752276ab
ToppCellMid-temporal_gyrus_(MTG)|World / Sample groups (6 Anatomical region groups), with 5 level hierarchy of cell types

TSHZ2 COL5A3 CHD3 COL24A1 XIRP2

8.73e-051781125ad187db4c40b9078d54dd915c143e0172b2f47b8
ToppCellLPS-IL1RA-Stromal_mesenchymal-Lung_smooth_muscle-MatrixFB_->_Myofibroblast|LPS-IL1RA / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2

COL6A3 COL9A1 TSHZ2 ADAM22 COL24A1

8.96e-05179112502c90d8306016365ed811f0c63cfb3ac7b85464c
ToppCell5'-Airway_Nasal-Mesenchymal-Fibroblastic|5' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5

COL6A3 COL7A1 COL12A1 GAP43 COL5A3

9.20e-051801125935c091bbcd6d10b81dc4731779e5bd98205c99f
ToppCell5'-Airway_Nasal-Mesenchymal|5' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5

COL6A3 COL7A1 COL12A1 GAP43 COL5A3

9.20e-0518011253dd384b7f3d9582b8fec9fe05100e466e6218b76
ToppCellRA-01._Fibroblast_I|World / Chamber and Cluster_Paper

COL4A3 COL6A3 TSHZ2 ECE1 COL24A1

9.44e-0518111252b6ddeb53a79a658e2ba78527ff48c155b20daa6
ToppCellmetastatic_Brain-Fibroblasts-Myofibroblasts|metastatic_Brain / Location, Cell class and cell subclass

COL6A3 COL12A1 GAP43 FAT3 ADAM22

9.44e-051811125bd0b5f74f9c81ec0f1592710774a4fdf33d9d5a9
ToppCellPND01-03-samps-Mesenchymal-Myofibroblast|PND01-03-samps / Age Group, Lineage, Cell class and subclass

COL6A3 COL7A1 COL12A1 MFHAS1 EPB41L3

9.69e-051821125812dac35b9aa05be48258082e007f6c00e7b4dd8
ToppCellkidney_cells-Hypertensive_with+without-CKD-Mesenchymal-Fibroblast-Collagen+matrisome-high_fibroblast|Hypertensive_with+without-CKD / Celltypes from Cells and Nuclei per compartment and clinical group

COL6A3 COL12A1 TSHZ2 FAT3 COL5A3

9.69e-051821125b7d532feb73167e05475855061b35a209583f44c
ToppCellkidney_cells-Hypertensive_with+without-CKD-Mesenchymal-Fibroblast-Collagen+matrisome-high_fibroblast-|Hypertensive_with+without-CKD / Celltypes from Cells and Nuclei per compartment and clinical group

COL6A3 COL12A1 TSHZ2 FAT3 COL5A3

9.69e-051821125af65f0fc3f9e5d9ce69ee5faaf5b6cb7f8412e0c
ToppCellwk_20-22-Mesenchymal-Chondrocyte-Resting_chondrocyte|wk_20-22 / Celltypes from embryonic and fetal-stage human lung

C1QTNF8 COL9A1 COL11A2 COL12A1 COL24A1

9.69e-05182112503a5a02acd48f0eb210485348bfe0cd21f486215
ToppCellNS-moderate-d_16-33-Lymphoid-NK|d_16-33 / Location, Severity, dps_group, Lineage and Cell class of Upper airway (combined)

COL6A3 COL7A1 COL12A1 COL5A3 NNMT

9.69e-051821125fb503f8ecd013f1f2161a5841572b57cfcddb6fa
ToppCellPND10-Endothelial-Endothelial_blood-vessel-Macrovascular_EC-AEC|PND10 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif

RABGAP1 ECE1 ITPR3 C1QTNF9 ATP2B1

9.94e-0518311253427f3cbe6ea81709750e7dd3ff378f03ae65eab
ToppCell5'-Airway_Nasal-Mesenchymal-Fibroblastic-fibroblastic_type_2|5' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5

COL6A3 COL7A1 COL12A1 GAP43 COL5A3

9.94e-051831125803376f5260de83c48d4f7301278d078a32b3e6e
ToppCell5'-Airway_Nasal-Mesenchymal-Fibroblastic-fibroblastic_type_2-Peribronchial_fibroblasts-Peribronchial_fibroblasts_L.2.1.3.1|5' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5

COL6A3 COL7A1 COL12A1 GAP43 COL5A3

9.94e-0518311256d98973098c6d20c5305bce6a83a549a7d8dbfba
ToppCell5'-Airway_Nasal-Mesenchymal-Fibroblastic-fibroblastic_type_2-Peribronchial_fibroblasts|5' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5

COL6A3 COL7A1 COL12A1 GAP43 COL5A3

9.94e-051831125cc7f5a17b40e8d901885174922e5fa8877643071
ToppCellLPS_only-Stromal_mesenchymal-Lung_smooth_muscle-MatrixFB_->_Myofibroblast|LPS_only / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2

COL6A3 COL9A1 TSHZ2 ADAM22 COL24A1

9.94e-05183112512daaea821e49bc94a01e2496331e92a80d27339
ToppCell(4)_Endothelial_cells-(40)_EC-arterial|World / Cell class and subclass of bone marrow stroma cells in homeostatis

TSHZ2 TPPP ECE1 C1QTNF9 AFDN

1.02e-0418411257e1a2971321ddcfa00d78d3e3ba7960e532f9392
ToppCellChildren_(3_yrs)-Epithelial-alveolar_epithelial_cell_type_1|Children_(3_yrs) / Lineage, Cell type, age group and donor

COL4A3 COL12A1 EPB41L3 OTUD7B AFDN

1.05e-0418511251c222f7285d6e3dae0354dc7e853ddc0ea55e63e
ToppCellCOVID-19-Heart-Fib_2|COVID-19 / Disease (COVID-19 only), tissue and cell type

COL6A3 COL12A1 GAP43 TSHZ2 COL5A3

1.05e-0418511258f95d8e591bf7379d13f5a0545b0cb49e2b1ab5d
ToppCellLPS-IL1RA+antiTNF-Stromal_mesenchymal-Lung_smooth_muscle-MatrixFB_->_Myofibroblast|LPS-IL1RA+antiTNF / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2

COL6A3 COL9A1 TSHZ2 ADAM22 COL24A1

1.05e-0418511253b2dfc8f4c87be516265dbecfc251276034d0efd
ToppCell5'-Airway_Nasal-Epithelial-Airway_epithelium-respiratory_basal_cell-Suprabasal-Suprabasal_L.0.0.1.0|5' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5

COL4A6 COL7A1 AKR1A1 AHNAK AHNAK2

1.05e-041851125e0172e0ab0f1d7151a3c3c63bb7c84d6bda92035
ToppCell5'-GW_trimst-1.5-SmallIntestine-Neuronal-neurons_A-Branch_A3_(IPAN/IN)|GW_trimst-1.5 / Celltypes from developing, pediatric, Crohn's, & adult GI tract

ERICH3 GAP43 EPB41L3 KCNQ3 ACTL6B

1.07e-04186112518fd311252299d6d30ddb32002ed069056108206
ToppCellfacs-Brain_Non-Myeloid-Cortex-24m|Brain_Non-Myeloid / Brain_Non-Myeloid_Brain_Myeloid - method, tissue, subtissue, age, lineage, cell ontology and free annotation

COL19A1 CHD3 KCNC2 KCNJ4 MAST1

1.07e-0418611257278a1a1bf9bb27aeb03852134defb31b62f30d6
ToppCellLA-01._Fibroblast_I|World / Chamber and Cluster_Paper

COL4A3 COL6A3 COL12A1 TSHZ2 NNMT

1.10e-0418711254ea486991f66c29728d127171a07b81404ec0b78
ToppCellFetal_29-31_weeks-Mesenchymal-myofibroblast_cell|Fetal_29-31_weeks / Lineage, Cell type, age group and donor

COL6A3 COL12A1 TSHZ2 COL24A1 PBX3

1.10e-041871125c104fbfef2d0bef64077ac721edf2379fd59d547
ToppCellfacs-Brain_Non-Myeloid-Hippocampus-24m-Neuronal-neuron|Brain_Non-Myeloid / Brain_Non-Myeloid_Brain_Myeloid - method, tissue, subtissue, age, lineage, cell ontology and free annotation

CHD3 SLC7A8 NAPB ACTL6B ATP2B1

1.10e-041871125e04a84989d624378141042768383b9c846901f2d
ToppCellfacs-Brain_Non-Myeloid-Hippocampus-24m-Neuronal-nan|Brain_Non-Myeloid / Brain_Non-Myeloid_Brain_Myeloid - method, tissue, subtissue, age, lineage, cell ontology and free annotation

CHD3 SLC7A8 NAPB ACTL6B ATP2B1

1.10e-04187112524cc03c748e15f7ef0e6509ca5a6ca583fb9c573
ToppCellfacs-Brain_Non-Myeloid-Hippocampus-24m-Neuronal|Brain_Non-Myeloid / Brain_Non-Myeloid_Brain_Myeloid - method, tissue, subtissue, age, lineage, cell ontology and free annotation

CHD3 SLC7A8 NAPB ACTL6B ATP2B1

1.10e-0418711252f153b203fe79f206319603cf94d3a03ab49a05d
ToppCelldroplet-Lung-3m-Mesenchymal-fibroblast-alveolar_fibroblast-alveolar_fibroblast_l1|3m / method, tissue, age, lineage, sublineage, cell ontologies, cell type and subtype

COL4A6 COL6A3 COL5A3 COL24A1 NNMT

1.13e-041881125b382d18fb09fb2869f3c151efa71540a7f5ed229
ToppCelldroplet-Marrow-BM-30m-Myeloid-macrophage|Marrow / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation

GPATCH4 SND1 DMKN ALDH1B1 UBFD1

1.13e-041881125bf77e59b9001c7f7ca17f81073f935f281a25a1f
ToppCelldroplet-Marrow-BM-30m-Myeloid-Cd4_positive_Macrophages|Marrow / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation

GPATCH4 SND1 DMKN ALDH1B1 UBFD1

1.13e-041881125b2472a294b25fc2f0da7f18519fdcb9ca166c6f0
ToppCell5'-Adult-LargeIntestine-Mesenchymal-fibroblastic-Stromal_2_(NPY+)|Adult / Celltypes from developing, pediatric, Crohn's, & adult GI tract

COL4A6 COL6A3 TSHZ2 DMKN NNMT

1.13e-041881125997dcfc4f08738ab398d8abc15e4fd2fc6619862
ToppCell10x3'2.3-week_14-16-Mesenchymal_osteo-stroma-chondrocyte|week_14-16 / cell types per 3 fetal stages;per 3',per 5'

COL9A1 COL11A2 COL12A1 TSHZ2 DMKN

1.13e-0418811255a89587ee6f2b4dc14244bd88bb31efb81c50dbe
ToppCellMesenchymal-myofibroblast_cell|World / Lineage, Cell type, age group and donor

COL6A3 COL12A1 TSHZ2 COL24A1 PBX3

1.16e-04189112544e37f88137bb249933eb615235b2cf2ae7f3925
ToppCell10x5'v1-week_12-13-Mesenchymal_fibro-stroma-endosteal_fibroblast|week_12-13 / cell types per 3 fetal stages;per 3',per 5'

COL6A3 COL12A1 GAP43 TSHZ2 COL5A3

1.16e-041891125473b01c9162b12b90a617c600238436177a0d18d
ToppCell10x3'2.3-week_12-13-Mesenchymal_fibro-stroma-endosteal_fibroblast|week_12-13 / cell types per 3 fetal stages;per 3',per 5'

COL12A1 COL19A1 GAP43 TSHZ2 COL5A3

1.16e-041891125c392491aabe8a3e90974ab2ea123bbbe5200439d
ToppCellAT2_cells-Cryobiopsy_01|World / lung cells shred on cell class, cell subclass, sample id

SFTPD ITPR3 DMKN C1QTNF9 KCNQ3

1.16e-0418911252d32f09efa982ae458568f6b1cd06bb5078d42a3
ToppCellfacs-Pancreas-Endocrine-3m-Epithelial-pancreatic_D_cell|Pancreas / Large_Intestine_Pancreas_Liver - method, tissue, subtissue, age, lineage, cell ontology and free annotation

GAP43 SFTPD ADAM22 KCNC2 KCNJ4

1.16e-041891125fcc3713e8200d51074f709f3360fb36efb0a639f
ToppCell10x5'v1-week_14-16-Myeloid_macrophage-stroma-erythroid_macrophage|week_14-16 / cell types per 3 fetal stages;per 3',per 5'

COL11A2 COL12A1 FAT3 EPB41L3 SLC7A8

1.19e-041901125cf463b2f227f3cc7d3fd296c810c0cbe51cbee72
ToppCellChildren_(3_yrs)-Epithelial-alveolar_epithelial_cell_type_1-D032|Children_(3_yrs) / Lineage, Cell type, age group and donor

COL4A3 COL12A1 EPB41L3 OTUD7B AFDN

1.19e-04190112530b50d183d7649146eb1e79b47ba897355f1998a
ComputationalNeighborhood of PSMC2

CANX IST1 BANF1 DRG1 PIGC RAD21

8.39e-05115686MORF_PSMC2
ComputationalNeighborhood of RAB1A

CANX IST1 PICALM DRG1 PIGC PRPF4 RAD21

2.07e-04193687MORF_RAB1A
ComputationalNeighborhood of PRKAR1A

CANX IST1 BANF1 DRG1 PIGC RAD21

2.77e-04143686MORF_PRKAR1A
ComputationalNeighborhood of RAC1

CANX IST1 PICALM BANF1 DRG1 PIGC RAD21

3.68e-04212687MORF_RAC1
ComputationalNeighborhood of MTA1

CANX BANF1 DRG1 PIGC RAD21

4.32e-04101685MORF_MTA1
DrugGK-101

COL4A3 COL4A6 COL6A3 COL7A1 COL9A1 COL11A2 COL12A1 COL24A1

6.20e-12361108CID000161853
DrugAC1LAKND

COL4A3 COL4A6 COL6A3 COL7A1 COL9A1 COL11A2 COL12A1 COL19A1 COL24A1

1.68e-11621109CID000470146
Drugkhellin

COL4A3 COL4A6 COL6A3 COL7A1 COL9A1 COL11A2 COL12A1 COL19A1 COL24A1 AVIL ACTL6B TOP2B

4.06e-1117111012CID000003828
DrugMadecassol

COL4A3 COL4A6 COL6A3 COL7A1 COL9A1 COL11A2 COL12A1 COL24A1

5.14e-11461108CID000108062
DrugBAPN

COL4A3 COL4A6 COL6A3 COL7A1 COL9A1 COL11A2 COL12A1 COL19A1 COL24A1

5.96e-11711109CID000001647
Drugd-indobufen

COL4A3 COL4A6 COL6A3 COL7A1 COL9A1 COL11A2 COL12A1 COL24A1

1.04e-10501108CID000044562
Drughydroxylysine

COL4A3 COL4A6 COL6A3 COL7A1 COL9A1 COL11A2 COL12A1 COL19A1 SFTPD COL24A1

1.31e-1010911010CID000001029
Drugridogrel

COL4A3 COL4A6 COL6A3 COL7A1 COL9A1 COL11A2 COL12A1 COL24A1

1.45e-10521108CID005362391
DrugNSC49633

COL4A3 COL4A6 COL6A3 COL7A1 COL9A1 COL11A2 COL12A1 COL24A1

1.70e-10531108CID000023340
Drughalofuginone lactate

COL4A3 COL4A6 COL6A3 COL7A1 COL9A1 COL11A2 COL12A1 COL19A1 COL24A1

3.12e-10851109CID000062891
Drug4-hydroxyproline

COL4A3 COL4A6 COL6A3 COL7A1 COL9A1 COL11A2 COL12A1 COL19A1 COL24A1

5.79e-10911109CID000000825
DrugPCR 4099

COL4A3 COL4A6 COL6A3 COL7A1 COL9A1 COL11A2 COL12A1 COL19A1 COL24A1 MAST1

1.45e-0913911010CID000002806
Drugticlopidine

COL4A3 COL4A6 COL6A3 COL7A1 COL9A1 COL11A2 COL12A1 COL19A1 COL24A1

1.77e-091031109CID000005472
Drugmalotilate

COL4A3 COL4A6 COL6A3 COL7A1 COL9A1 COL11A2 COL12A1 COL24A1

1.90e-09711108CID000004006
DrugAC1NMZ1B

COL4A3 COL4A6 COL6A3 COL7A1 COL9A1 COL11A2 COL12A1 COL24A1

2.96e-09751108CID005034185
Drugstrontium ranelate

COL4A3 COL4A6 COL6A3 COL7A1 COL9A1 COL11A2 COL12A1 COL24A1

3.66e-09771108CID006918182
DrugTranilast sodium

COL4A3 COL4A6 COL6A3 COL7A1 COL9A1 COL11A2 COL12A1 COL19A1 COL24A1

4.72e-091151109CID000005527
DrugDMSe

COL4A3 COL4A6 COL6A3 COL7A1 COL9A1 COL11A2 COL12A1 COL5A3 COL24A1

1.59e-081321109CID000020796
Drugpirfenidone

COL4A3 COL4A6 COL6A3 COL7A1 COL9A1 COL11A2 COL12A1 COL19A1 COL24A1

2.35e-081381109CID000040632
DrugDL-penicillamine

COL4A3 COL4A6 COL6A3 COL7A1 COL9A1 COL11A2 COL12A1 COL19A1 COL24A1

2.50e-081391109CID000004727
Drugcandesartan cilexetil

COL4A3 COL4A6 COL6A3 COL7A1 COL9A1 COL11A2 COL12A1 COL24A1 ACTL6B

3.61e-081451109CID000002540
DrugAC1L1C2F

COL4A3 COL4A6 COL6A3 COL7A1 COL9A1 COL11A2 COL12A1 COL24A1

6.25e-081101108CID000001711
DrugPPACK

COL4A3 COL4A6 COL6A3 COL7A1 COL9A1 COL11A2 COL12A1 COL24A1

7.71e-081131108CID003036757
DrugAC1L9732

COL4A3 COL4A6 COL6A3 COL7A1 COL9A1 COL11A2 COL12A1 COL24A1

8.26e-081141108CID000439300
DrugSelara

COL4A3 COL4A6 COL6A3 COL7A1 COL9A1 COL11A2 COL12A1 COL24A1

1.69e-071251108CID000150310
DrugAC1Q6PCP

COL4A3 COL4A6 COL6A3 COL7A1 COL9A1 COL11A2 COL12A1 COL19A1 COL24A1 SLC12A1

1.77e-0723011010CID000005267
DrugAC1L1DD6

COL4A3 COL4A6 COL6A3 COL7A1 COL9A1 COL11A2 COL12A1 COL19A1 COL24A1

2.20e-071791109CID000002299
Drugcolchine

COL4A3 COL4A6 COL6A3 COL7A1 COL9A1 COL11A2 COL12A1 COL19A1 COL24A1 PVALB ACTL6B TOP2B

3.46e-0738311012CID000002833
Drugfoscarnet

COL4A3 COL4A6 COL6A3 COL7A1 COL9A1 COL11A2 COL12A1 COL24A1 ACTL6B

3.65e-071901109CID000003414
Drugprostacyclin sodium salt

COL4A3 COL4A6 COL6A3 COL7A1 COL9A1 COL11A2 COL12A1 ECE1 COL24A1 ACTL6B

3.82e-0725011010CID000000159
DrugL-lysyl-L-lysyl-L-lysine

COL4A3 COL4A6 COL6A3 COL7A1 COL9A1 COL11A2 COL12A1 COL24A1

1.22e-061621108CID000072363
Drugsilibinin

COL4A3 COL4A6 COL6A3 COL7A1 COL9A1 COL11A2 COL12A1 COL19A1 COL24A1 PRKDC

1.26e-0628511010CID000005213
Druglosartan

COL4A3 COL4A6 COL6A3 COL7A1 COL9A1 COL11A2 COL12A1 COL19A1 COL24A1 SLC12A1 ACTL6B

2.24e-0637811011CID000003961
Drug(2s,5s)-5-Carboxymethylproline

COL4A3 COL4A6 COL6A3 COL7A1 COL9A1 COL11A2 COL12A1 SFTPD COL24A1 DMKN

2.99e-0631411010CID000447989
Drug12(S)-hydroxyeicosatetraenoic acid

COL4A3 COL4A6 COL6A3 COL7A1 COL9A1 COL11A2 COL12A1 COL24A1

3.87e-061891108CID000001413
Drugchondroitin sulfate

COL4A3 COL4A6 COL6A3 COL7A1 COL9A1 COL11A2 COL12A1 COL19A1 BANF1 COL24A1 PVALB

5.23e-0641311011CID000024766
DrugMemantine Hydrochloride [41100-52-1]; Down 200; 18.6uM; HL60; HT_HG-U133A

COPA DPH5 PIGC ATG3 AHNAK FER ALDH1B1 KDM4B

5.25e-0619711082934_DN
DrugAllantoin [97-59-6]; Up 200; 25.2uM; MCF7; HT_HG-U133A

COPA MFHAS1 CANX HNMT ADAM22 SRRT KCNQ3 ALDH1B1

5.25e-0619711081678_UP
Drughyaluronan

COL4A3 COL4A6 COL6A3 COL7A1 COL9A1 COL11A2 COL12A1 COL19A1 COL24A1

5.37e-062631109CID000024759
DrugBenoxinate hydrochloride [5987-82-6]; Up 200; 11.6uM; HL60; HG-U133A

CEL RSF1 COL5A3 HNMT MED4 DPH5 SND1 RAD21

5.45e-0619811081976_UP
DrugAC1L1KMJ

COL4A3 COL4A6 COL6A3 COL7A1 COL9A1 COL11A2 COL12A1 COL19A1 CABLES1 COL24A1 ACTL6B

1.97e-0547611011CID000030956
DrugAC1L18QD

COL4A3 COL4A6 COL6A3 COL7A1 COL9A1 COL11A2 COL12A1 COL19A1 COL24A1

2.89e-053251109CID000000213
DrugHesperidin [520-26-3]; Down 200; 6.6uM; PC3; HT_HG-U133A

CANX ECE1 HNMT PICALM PRPF4 PRKDC ALDH1B1

4.16e-0519211076714_DN
DrugGlycocholic acid [475-31-0]; Down 200; 8.6uM; PC3; HT_HG-U133A

CANX CHD3 SRRT PRPF4 FER PRKDC ALDH1B1

4.30e-0519311076716_DN
DrugEthamivan [304-84-7]; Down 200; 18uM; HL60; HG-U133A

ERF CANX PICALM AHNAK ATP2B1 PRRC2B RAD21

4.44e-0519411071730_DN
Drug5194442; Down 200; 20uM; PC3; HT_HG-U133A

COPA RABGAP1 HNMT SLC7A8 SRRT FER ALDH1B1

4.44e-0519411076553_DN
DrugSC-560; Down 200; 10uM; MCF7; HT_HG-U133A

COPA ECE1 HNMT ADAM22 ATG3 DGCR8 ALDH1B1

4.59e-0519511076870_DN
DrugCP-320650-01 [172079-28-6]; Up 200; 1uM; MCF7; HT_HG-U133A

COL4A3 RABGAP1 ECE1 SLC7A8 HNRNPA0 DGCR8 KDM4B

4.59e-0519511074382_UP
DrugIodixanol [92339-11-2]; Up 200; 2.6uM; MCF7; HT_HG-U133A

RABGAP1 HNMT ADAM22 MED4 DPH5 KDM4B AHNAK2

4.59e-0519511074848_UP
DrugAconitine [302-27-2]; Down 200; 6.2uM; MCF7; HT_HG-U133A

RABGAP1 ECE1 DPH5 PIGC ATG3 FER ALDH1B1

4.90e-0519711076797_DN
DrugBisoprolol fumarate; Up 200; 9uM; PC3; HT_HG-U133A

CUL3 ADAM22 ITPR3 SLC7A8 AHNAK DGCR8 ALDH1B1

5.05e-0519811076748_UP
DrugAmrinone [60719-84-8]; Up 200; 21.4uM; MCF7; HT_HG-U133A

COL7A1 HNMT ADAM22 AVIL DGCR8 AHNAK2 ZNF646

5.22e-0519911076826_UP
DrugFludrocortisone acetate [514-36-3]; Up 200; 9.4uM; MCF7; HT_HG-U133A

SUN1 HKDC1 ECE1 ADAM22 SLC7A8 AHNAK AFDN

5.39e-0520011073866_UP
DrugFelbinac [5728-52-9]; Up 200; 18.8uM; MCF7; HT_HG-U133A

COL7A1 HKDC1 ECE1 AFDN DGCR8 KDM4B ZNF646

5.39e-0520011073398_UP
DrugNC-4

COL9A1 COL11A2 COL12A1 KCNJ4

6.03e-05441104CID006420119
DrugLMWH

COL4A3 COL4A6 COL6A3 COL7A1 COL9A1 COL11A2 COL12A1 CEL ITPR3 COL24A1 KCNQ3 ACTL6B

8.77e-0566311012CID000000772
DrugEmetine dihydrochloride [316-42-7]; Down 200; 7.2uM; HL60; HT_HG-U133A

CUL3 MFHAS1 HNRNPA0 PRKDC PBX3 AKAP1

1.52e-0416511062145_DN
Drug1h00

COL6A3 COL9A1 COL11A2 FER

1.56e-04561104CID000445950
DrugCephaeline dihydrochloride heptahydrate [6487-30-5]; Down 200; 6uM; HL60; HT_HG-U133A

CUL3 CEL MFHAS1 SUN1 HNRNPA0 DGCR8

1.85e-0417111062429_DN
DiseaseMEHMO syndrome (implicated_via_orthology)

EIF2S3B EIF2S3

1.30e-0521072DOID:0060801 (implicated_via_orthology)
Diseaseskin disease (implicated_via_orthology)

C1QTNF9B C1QTNF9

3.90e-0531072DOID:37 (implicated_via_orthology)
DiseaseBethlem myopathy (is_implicated_in)

COL6A3 COL12A1

7.78e-0541072DOID:0050663 (is_implicated_in)
DiseaseUllrich congenital muscular dystrophy

COL6A3 COL12A1

7.78e-0541072cv:C4551860
DiseaseBethlem myopathy

COL6A3 COL12A1

7.78e-0541072cv:C1834674
DiseaseBETHLEM MYOPATHY 1

COL6A3 COL12A1

7.78e-0541072C1834674
DiseaseUllrich congenital muscular dystrophy (is_implicated_in)

COL6A3 COL12A1

7.78e-0541072DOID:0050558 (is_implicated_in)
DiseaseUllrich congenital muscular dystrophy 1

COL6A3 COL12A1

7.78e-0541072C0410179
DiseaseStickler syndrome

COL9A1 COL11A2

1.29e-0451072cv:C0265253
Diseaseglucose metabolism disease (implicated_via_orthology)

HKDC1 EIF2S3B EIF2S3

1.42e-04281073DOID:4194 (implicated_via_orthology)
Diseasehypopituitarism (implicated_via_orthology)

EIF2S3B EIF2S3

1.94e-0461072DOID:9406 (implicated_via_orthology)
Diseaseurate measurement

COL7A1 GAP43 MFHAS1 CHD3 EPB41L3 MED4 ZNHIT6 SLC12A1 FMN2 KDM4B PRRC2B

4.12e-0489510711EFO_0004531
Diseaseleukodystrophy (implicated_via_orthology)

EIF2S3B EIF2S3

4.61e-0491072DOID:10579 (implicated_via_orthology)
DiseaseSensory hearing loss

COL9A1 COL11A2

7.01e-04111072C1691779
Diseasecollagen disease (implicated_via_orthology)

COL4A3 COL4A6

8.40e-04121072DOID:854 (implicated_via_orthology)
Diseasealkaline phosphatase measurement

CEL MFHAS1 ZNF366 IST1 CHD3 ECE1 SRRT AHNAK ENTPD6 FMN2 RAI1

1.16e-03101510711EFO_0004533
DiseaseStevens-Johnson syndrome, toxic epidermal necrolysis

ADAM22 DDX39B

1.71e-03171072EFO_0004276, EFO_0004775
Diseaseautosomal dominant intellectual developmental disorder (is_implicated_in)

ATP2B1 KDM4B

1.71e-03171072DOID:0060307 (is_implicated_in)
Diseaseuric acid measurement

CEL FAT3 C1QTNF9B EPB41L3 BANF1 MED4 KDM4B PRRC2B

1.73e-036101078EFO_0004761
DiseaseMyeloid Leukemia

TOP2B RAD21

1.92e-03181072C0023470
DiseaseLeukemia, Monocytic, Chronic

TOP2B RAD21

1.92e-03181072C0023466
Diseaseosteochondrodysplasia (is_implicated_in)

COL9A1 COL11A2

2.14e-03191072DOID:2256 (is_implicated_in)
DiseaseCraniofacial Abnormalities

COL11A2 ERF ECE1 RAI1

2.54e-031561074C0376634
DiseaseDown syndrome (is_marker_for)

HNMT NAPB

2.87e-03221072DOID:14250 (is_marker_for)
DiseaseSensorineural Hearing Loss (disorder)

COL9A1 COL11A2

3.14e-03231072C0018784
Diseaseunipolar depression, neuroticism measurement

ZNF366 PBX3

3.41e-03241072EFO_0003761, EFO_0007660
Diseasechronic obstructive pulmonary disease

COL6A3 SFTPD MFHAS1 AKR1A1 PICALM OTUD7B HOXC6 TOP2B

3.62e-036881078EFO_0000341

Protein segments in the cluster

PeptideGeneStartEntry
VKGGAADVDGRLAAG

AFDN

1041

P55196
AGGFEDEGEDKKVRG

ERF

501

P50548
KAGLPGLEEGGKDSL

ERICH3

716

Q5RHP9
KLVERAGAGAAGAGE

FAM246A

71

A0A494C0Y3
KLVERAGAGAAGAGE

FAM246B

71

A0A494C0N9
GAEGTGDAVLGEKVL

AKAP1

201

Q92667
GVLKGELSDLGAEDG

AKAP1

546

Q92667
GRAKIGVIEGDKEAA

AVIL

201

O75366
KGEDGKVGVSGDVGL

COL4A6

1111

Q14031
GLMGEDGIKGQKGDI

COL4A3

321

Q01955
GPKGELALSGEKGDQ

COL4A3

581

Q01955
AAGGDGAEAPAKKDV

DDX39B

21

Q13838
AEEGGGLELEGDKEK

ACTL6B

46

O94805
KESGNGRELGEDGLK

ALDH1B1

486

P30837
LLKGGGVNEFGKTDL

ADAM22

351

Q9P0K1
FEGGEVSLEGGKVKG

AHNAK

5801

Q09666
GVGIGGESADKKDEE

DGCR8

171

Q8WYQ5
GFVEGVNKKLGLLGD

CEL

31

P19835
GDGTNDGPALKKADV

ATP2B1

796

P20020
KKIIETVAEGGGELG

ATG3

271

Q9NT62
KQEEVGGVKEEAGGL

RAI1

811

Q7Z5J4
GEGNDGGILDDKLIS

RAD21

221

O60216
KGSGKGEEVEAGAAK

ITPR3

1131

Q14573
AVAAGLGLEAGSKEE

KCNJ4

396

P48050
GGGVALKKEIGLVSA

SLC7A8

31

Q9UHI5
GLGLGDAKDITVKGL

DPH5

6

Q9H2P9
GGKEEAAGDGPVSEK

OTUD7B

561

Q6GQQ9
GSDDEKTGLKIVGNG

RABGAP1

41

Q9Y3P9
GADGDGRKQDIGDIL

PBX3

36

P40426
AAKRLGIEDAAGLGG

KCNC2

186

Q96PR1
LKKGENGVPGEDAGL

LYSMD1

176

Q96S90
LDLPGIIEGAKDGKG

DRG1

116

Q9Y295
LGKAVSEGAEEAKLG

KIAA1671

156

Q9BY89
GDGGAKALAEALKVN

NLRC3

791

Q7RTR2
KLLLGTSGEGKAEGE

MFHAS1

751

Q9Y4C4
GGDREGVEKVLGELS

MYO1A

651

Q9UBC5
ADKDGTLLLEGGGRD

KCNQ3

61

O43525
AGKNVLLLGEDGAGK

DYNC1LI1

66

Q9Y6G9
LEEGGKGKEAAGSVR

GPATCH4

306

Q5T3I0
KSEIKILSIGGGAGE

HNMT

51

P50135
LDGVKGDLLIDIGSG

NNMT

51

P40261
FKGDIGVKGDRGEVG

COL11A2

746

P13942
AVGGLGKLGKDAVED

DCD

76

P81605
AGAALLEEAGGSVKE

KDM4B

396

O94953
SGEKEKERLGGGLGV

MED4

6

Q9NPJ6
EEKVAGKREGLGGLT

MAST1

746

Q9Y2H9
GGATADSLGGKEEKR

HOXC6

211

P09630
GEKGERGADGKVEAK

C1QTNF9

71

P0C862
RGADGKVEAKGIKGD

C1QTNF9

76

P0C862
GDSKLENAGGDLKDG

GMPS

6

P49915
EIIGLEGVELGADGK

CABLES1

381

Q8TDN4
SGLKGEKGDRGDIAS

COL12A1

2886

Q99715
ALSEGVGKAIGKEAG

DMKN

46

Q6E0U4
EKGEQGEKGDPALAG

COL19A1

341

Q14993
EDVILGELLGKGNFG

FER

561

P16591
EGETGDLGKREDVKG

CHD3

1666

Q12873
GKGGALAADIDIDTV

COPA

826

P53621
PVKKEDGSEVGVGGA

CUL3

566

Q13618
GEKGEVGEIGLDGLD

COL6A3

2101

P12111
HDGKIIALGGLDSGK

FAT3

3601

Q8TDW7
EEGTGLTGIKEIGDG

ZNHIT6

46

Q9NWK9
LTGIKEIGDGEEGSG

ZNHIT6

51

Q9NWK9
GEKGERGADGKVEAK

C1QTNF9B

71

B2RNN3
RGADGKVEAKGIKGD

C1QTNF9B

76

B2RNN3
GLKKAADGAAEPGVV

CANX

456

P27824
EILKGEKGEAGVRGR

C1QTNF8

66

P60827
IDVGFTDDVKKGGPG

IST1

196

P53990
IVGDKGEKGARGLDG

COL9A1

476

P20849
GSAGLKGDKGDSAVI

COL7A1

2511

Q02388
VQLGKLLGGGDEEAI

ECE1

286

P42892
VDDLKGGVAGGSILK

EIF2S3B

271

Q2VIR3
GSLAGIGEVLGKKLE

BANF1

21

O75531
GKLKRSAGDALHEGG

FMN2

6

Q9NZ56
KGKGAGGSREDVLDS

FMN2

86

Q9NZ56
DDIKEADGGGVGRGK

RSF1

1036

Q96T23
GAGEKGAKGEPAVIE

COL5A3

371

P25940
RGLQGEKGEKGEDGF

COL5A3

721

P25940
PGVKGEEGEKAATAE

COL26A1

346

Q96A83
GKEGSALTEGAKEEG

EPB41L3

891

Q9Y2J2
EVDIEAKDGGGLSGK

PCDHB3

316

Q9Y5E6
GKVLKAVEGEGGVRS

TMEM67

646

Q5HYA8
EKMGGEDDELKGLLG

PPP1R8

141

Q12972
IKGIPKLDDANDAGG

TOP2B

456

Q02880
ILGGVEGQPAKDGKE

ENTPD6

306

O75354
DGTEKGKFLALDLGG

HKDC1

521

Q2TB90
EAPVADGVEKKGEGT

GAP43

71

P17677
ERLAKGESGILGKDG

PRPF4

41

O43172
GESGILGKDGLKAGI

PRPF4

46

O43172
LGKDGLKAGIEAGNI

PRPF4

51

O43172
DSKGDVGLGLVKEGL

SND1

846

Q7KZF4
EEESGGIRGLFKKAG

SLC12A1

851

Q13621
AGEKLKSAGAQGGEE

RHOXF2B

56

P0C7M4
KGVGAGEEKDGAAVS

RUSC1-AS1

81

Q66K80
DLIDGGEGRKKSGQT

PIGC

101

Q92535
LVGEDGAADASKGLG

PRR12

661

Q9ULL5
DGGGKIDLIEAGAFT

PM20D2

166

Q8IYS1
GEPSKKEEGRAGAGL

SRRT

281

Q9BXP5
SKAGTGLKGEEVEGA

AHNAK2

521

Q8IVF2
IGEALKEDVGPGKAV

AKR1A1

56

P14550
GLDGIKELEIGQAGS

NCAPD2

1296

Q15021
ESQVKGGGDKPLADG

CNGA3

666

Q16281
GIKGDKGEQGTAGEL

COL24A1

711

Q17RW2
IVDSGGFDELGGLLK

PICALM

501

Q13492
GEKEIIGGDVEGTKL

XIRP2

1601

A4UGR9
DEESKGLGKENGIGT

USP42

616

Q9H9J4
DAGGGAGRELVDLKI

UBFD1

76

O14562
GDKGAKGESGLPDVA

SFTPD

211

P35247
FVGGLKGDVAEGDLI

HNRNPA0

101

Q13151
LMAAGDKDGDGKIGV

PVALB

86

P20472
VGAEAEAKGAGEAGL

PRX

971

Q9BXM0
GKDGVLRDGDGAVVL

SOGA1

1356

O94964
AAVEEAKVARKGGGL

TMEM102

486

Q8N9M5
DKESGGTGEGLERKD

ZNF646

751

O15015
VDGGLSGASLGEKKE

PRRC2B

1401

Q5JSZ5
AGEKLKSAGAQGGEE

RHOXF2

56

Q9BQY4
LRIKKSIQGDGEGDG

NAPB

281

Q9H115
LEDGSKGGGDILKSL

TSHZ2

506

Q9NRE2
GLPGDEVDNKVKGAA

PRKDC

2706

P78527
GKGKAGRVDLVDESG

TPPP

186

O94811
EKRSKGDLGAEGGQE

ZNF366

676

Q8N895
GLDDDGDLKGGNKAA

SUN1

151

O94901
LIVGKALGEDIGGKR

TMEM234

96

Q8WY98
KEAVAAAGAAGGKGE

TEX13B

186

Q9BXU2
VDDLKGGVAGGSILK

EIF2S3

271

P41091