Cluster composition

Functions

CategoryNameIntersectionWithQueryPValueGenesInTermGenesInQueryGenesInTermInQueryID
GeneOntologyMolecularFunctionstructural constituent of synapse

POTEI POTEJ RIMS2

3.94e-0442683GO:0098918
GeneOntologyMolecularFunctionstructural constituent of postsynaptic actin cytoskeleton

POTEI POTEJ

6.16e-0411682GO:0098973
GeneOntologyMolecularFunctionmodification-dependent protein binding

UIMC1 ANK3 CHD8 CHD1 OTUD7B

6.85e-04206685GO:0140030
GeneOntologyBiologicalProcessmRNA processing

RBM15 SAFB DDX46 TENT4B SRSF4 PNN SLTM PRPF38B CHD8 SREK1 THRAP3 CWF19L1

1.84e-075516712GO:0006397
GeneOntologyBiologicalProcessmedial motor column neuron differentiation

LHX4 LHX3

1.04e-052672GO:0021526
GeneOntologyBiologicalProcessmRNA metabolic process

RBM15 SAFB DDX46 TENT4B SRSF4 PNN SLTM PRPF38B CHD8 SREK1 THRAP3 CWF19L1

3.48e-059176712GO:0016071
GeneOntologyBiologicalProcesssomatic motor neuron differentiation

LHX4 LHX3

1.03e-045672GO:0021523
GeneOntologyBiologicalProcesssomite specification

MEOX1 MEOX2

1.03e-045672GO:0001757
GeneOntologyBiologicalProcessregulation of mRNA processing

RBM15 SAFB SRSF4 SLTM THRAP3

1.63e-04158675GO:0050684
GeneOntologyBiologicalProcessmotor neuron axon guidance

LHX4 MYCBP2 LHX3

1.99e-0435673GO:0008045
GeneOntologyBiologicalProcessRNA splicing

RBM15 DDX46 SRSF4 PNN PRPF38B SREK1 THRAP3 CWF19L1

2.15e-04502678GO:0008380
GeneOntologyCellularComponentnuclear speck

RBM15 DDX46 SRSF4 PNN BCLAF1 SREK1 PNISR THRAP3 PYHIN1 MEOX2

1.25e-064316810GO:0016607
GeneOntologyCellularComponentnuclear body

UIMC1 RBM15 DDX46 SRSF4 PNN BCLAF1 SLTM SREK1 PNISR THRAP3 PYHIN1 MEOX2

3.07e-059036812GO:0016604
GeneOntologyCellularComponentnuclear protein-containing complex

UIMC1 KMT2C DDX46 TENT4B PNN BCLAF1 PRPF38B CHD8 SREK1 SSRP1 MIDEAS DEK THRAP3 CWF19L1

1.16e-0413776814GO:0140513
GeneOntologyCellularComponentspliceosomal complex

DDX46 PNN PRPF38B SREK1 CWF19L1

6.77e-04215685GO:0005681
HumanPhenoTypically de novo

KMT2C ATN1 CHD8

7.99e-0612183HP:0025352
HumanPhenoHypothalamic luteinizing hormone-releasing hormone deficiency

LHX3 SIM1

3.53e-053182HP:0012287
HumanPhenoThyroid hypoplasia

LHX4 TCOF1 LHX3

6.28e-0523183HP:0005990
HumanPhenoAbnormal shape of the palpebral fissure

KMT2C STXBP1 CHD1 SIM1

6.46e-0565184HP:0200005
HumanPhenoAplasia/Hypoplasia of the thyroid gland

LHX4 TCOF1 LHX3

8.12e-0525183HP:0033079
HumanPhenoThyroid dysgenesis

LHX4 TCOF1 LHX3

9.16e-0526183HP:0008188
HumanPhenoAutistic behavior

CUL3 KMT2C STXBP1 ANK3 HECTD4 CHD8 CHD1 SIM1 RIMS2

1.97e-04678189HP:0000729
HumanPhenoInappropriate antidiuretic hormone secretion

LHX4 LHX3

3.26e-048182HP:0031218
MousePhenoabnormal Rathke's pouch development

LHX4 TCOF1 LHX3

6.06e-0610533MP:0013351
DomainTHRAP3_BCLAF1

BCLAF1 THRAP3

3.57e-053652IPR029199
DomainTHRAP3_BCLAF1

BCLAF1 THRAP3

3.57e-053652PF15440
DomainSAP

SAFB SLTM DEK

5.91e-0522653PF02037
DomainSAP

SAFB SLTM DEK

6.78e-0523653SM00513
DomainSAP

SAFB SLTM DEK

8.76e-0525653PS50800
DomainSAP_dom

SAFB SLTM DEK

8.76e-0525653IPR003034
DomainSPOC_C

RBM15 PHF3

1.77e-046652IPR012921
DomainSPOC

RBM15 PHF3

1.77e-046652PF07744
DomainRRM_1

RBM15 SAFB SRSF4 SLTM SREK1

7.84e-04208655PF00076
DomainRRM

RBM15 SAFB SRSF4 SLTM SREK1

9.48e-04217655SM00360
DomainHomeodomain-like

LHX4 LHX3 MIDEAS DEK MEOX1 MEOX2

1.03e-03332656IPR009057
DomainRRM_dom

RBM15 SAFB SRSF4 SLTM SREK1

1.16e-03227655IPR000504
DomainRRM

RBM15 SAFB SRSF4 SLTM SREK1

1.23e-03230655PS50102
DomainActin_CS

POTEI POTEJ

1.39e-0316652IPR004001
DomainACTINS_2

POTEI POTEJ

1.57e-0317652PS00432
Domain-

RBM15 SAFB SRSF4 SLTM SREK1

1.59e-032446553.30.70.330
DomainActin/actin-like_CS

POTEI POTEJ

1.76e-0318652IPR020902
DomainACTINS_ACT_LIKE

POTEI POTEJ

1.96e-0319652PS01132
DomainNucleotide-bd_a/b_plait

RBM15 SAFB SRSF4 SLTM SREK1

2.03e-03258655IPR012677
Domain-

SAFB SLTM

2.40e-03216521.10.720.30
Domain-

LHX4 LHX3 DEK MEOX1 MEOX2

3.03e-032836551.10.10.60
DomainChromo_domain

CHD8 CHD1

3.13e-0324652IPR023780
DomainChromo

CHD8 CHD1

3.67e-0326652PF00385
DomainHomeobox_CS

LHX4 LHX3 MEOX1 MEOX2

4.02e-03186654IPR017970
DomainCHROMO_1

CHD8 CHD1

4.25e-0328652PS00598
DomainCHROMO_2

CHD8 CHD1

4.25e-0328652PS50013
DomainActin

POTEI POTEJ

5.20e-0331652IPR004000
DomainActin

POTEI POTEJ

5.20e-0331652PF00022
DomainACTIN

POTEI POTEJ

5.20e-0331652SM00268
DomainSNF2_N

CHD8 CHD1

5.53e-0332652IPR000330
DomainChromodomain-like

CHD8 CHD1

5.53e-0332652IPR016197
DomainSNF2_N

CHD8 CHD1

5.53e-0332652PF00176
DomainChromo/shadow_dom

CHD8 CHD1

5.87e-0333652IPR000953
DomainCHROMO

CHD8 CHD1

5.87e-0333652SM00298
DomainHelicase_C

DDX46 CHD8 CHD1

6.17e-03107653PF00271
DomainHELICc

DDX46 CHD8 CHD1

6.17e-03107653SM00490
DomainHelicase_C

DDX46 CHD8 CHD1

6.33e-03108653IPR001650
DomainHELICASE_CTER

DDX46 CHD8 CHD1

6.50e-03109653PS51194
DomainHELICASE_ATP_BIND_1

DDX46 CHD8 CHD1

6.50e-03109653PS51192
DomainDEXDc

DDX46 CHD8 CHD1

6.50e-03109653SM00487
DomainDNA/RNA_helicase_DEAH_CS

CHD8 CHD1

6.59e-0335652IPR002464
DomainHelicase_ATP-bd

DDX46 CHD8 CHD1

6.66e-03110653IPR014001
Pubmed

Large-scale characterization of HeLa cell nuclear phosphoproteins.

CUL3 UIMC1 RIF1 RBM15 SAFB DDX46 ATN1 GTF3C1 PNN TCOF1 MYCBP2 PHF3 BCLAF1 RICTOR PRPF38B SSRP1 PNISR THRAP3 USP47 OTUD7B

2.10e-17774682015302935
Pubmed

The Nse5/6-like SIMC1-SLF2 complex localizes SMC5/6 to viral replication centers.

CEP170 UIMC1 RIF1 RBM15 ZNF609 SAFB DDX46 UBAP2 SRSF4 PNN ATAD5 PHF3 BCLAF1 SLTM CHD8 CHD1 SREK1 SSRP1 MIDEAS DEK THRAP3

7.13e-17954682136373674
Pubmed

SR protein kinases promote splicing of nonconsensus introns.

CEP170 CUL3 RBM15 SAFB RPL37 DDX46 ANK3 PNN MYCBP2 PHF3 BCLAF1 SLTM PRPF38B PNISR THRAP3

3.53e-16361681526167880
Pubmed

Combinatorial targeting of a chromatin complex comprising Dot1L, menin and the tyrosine kinase BAZ1B reveals a new therapeutic vulnerability of endocrine therapy-resistant breast cancer.

RIF1 RBM15 SAFB DDX46 UBAP2 TENT4B SRSF4 GTF3C1 PNN TCOF1 PHF3 BCLAF1 SLTM CHD1 SREK1 SSRP1 DEK THRAP3

3.09e-14847681835850772
Pubmed

Synthetic Lethal and Resistance Interactions with BET Bromodomain Inhibitors in Triple-Negative Breast Cancer.

CUL3 UIMC1 RIF1 RBM15 SAFB DDX46 GTF3C1 PNN ATAD5 PHF3 BCLAF1 SLTM PRPF38B CHD8 CHD1 SSRP1 DEK THRAP3 CWF19L1

4.98e-141014681932416067
Pubmed

MECP2 directly interacts with RNA polymerase II to modulate transcription in human neurons.

CEP170 RBM15 SAFB DDX46 SRSF4 GTF3C1 PNN TCOF1 MYCBP2 BCLAF1 HECTD4 SLTM PRPF38B SREK1 SIM1 SSRP1 PNISR DEK THRAP3

1.57e-131082681938697112
Pubmed

SRCAP complex promotes lung cancer progression by reprograming the oncogenic transcription of Hippo-YAP/TAZ signaling pathway.

CEP170 KMT2C DDX46 UBAP2 GTF3C1 ANK3 PNN TCOF1 MYCBP2 PHF3 BCLAF1 CHD8 SSRP1 MIDEAS THRAP3

1.60e-13549681538280479
Pubmed

H4K20me0 recognition by BRCA1-BARD1 directs homologous recombination to sister chromatids.

UIMC1 KMT2C RIF1 RBM15 ZNF609 SAFB DDX46 SRSF4 GTF3C1 PNN TCOF1 ATAD5 PHF3 BCLAF1 SLTM SSRP1 PNISR MIDEAS DEK THRAP3

3.35e-131294682030804502
Pubmed

Functional proteomics establishes the interaction of SIRT7 with chromatin remodeling complexes and expands its role in regulation of RNA polymerase I transcription.

CEP170 RIF1 RBM15 DDX46 SRSF4 GTF3C1 PNN TCOF1 MYCBP2 PHF3 SLTM CHD8 CHD1 USP47

2.86e-11653681422586326
Pubmed

Interactome analyses revealed that the U1 snRNP machinery overlaps extensively with the RNAP II machinery and contains multiple ALS/SMA-causative proteins.

RIF1 ZNF609 SAFB DDX46 SRSF4 GTF3C1 PNN BCLAF1 SLTM THRAP3

4.89e-11244681029884807
Pubmed

SETD1A Methyltransferase Is Physically and Functionally Linked to the DNA Damage Repair Protein RAD18.

KMT2C RBM15 SAFB SRSF4 BCLAF1 PRPF38B CHD8 SSRP1 PNISR THRAP3

6.45e-11251681031076518
Pubmed

The STUbL RNF4 regulates protein group SUMOylation by targeting the SUMO conjugation machinery.

UIMC1 RIF1 ZNF609 SAFB UBAP2 TENT4B ATN1 ZNF608 PNN TCOF1 PHF3 BCLAF1 PRPF38B CHD8 CHD1 CPD THRAP3

1.10e-101203681729180619
Pubmed

The mRNA-bound proteome and its global occupancy profile on protein-coding transcripts.

RBM15 SAFB DDX46 TENT4B SRSF4 PNN TCOF1 BCLAF1 SLTM SREK1 SSRP1 PNISR DEK THRAP3

4.54e-10807681422681889
Pubmed

MYC multimers shield stalled replication forks from RNA polymerase.

RIF1 RBM15 SAFB TENT4B GTF3C1 TCOF1 PHF3 BCLAF1 SLTM CHD1 SREK1 SSRP1 MIDEAS DEK THRAP3

6.29e-10989681536424410
Pubmed

Reciprocal interaction between SIRT6 and APC/C regulates genomic stability.

CEP170 UBAP2 GTF3C1 TCOF1 MYCBP2 PHF3 BCLAF1 HECTD4 RICTOR CHD8 SSRP1

9.42e-10440681134244565
Pubmed

Identifying biological pathways that underlie primordial short stature using network analysis.

CEP170 RIF1 RBM15 SAFB DDX46 GTF3C1 PNN TCOF1 MYCBP2 BCLAF1 SLTM CHD1 SSRP1 DEK THRAP3

1.01e-091024681524711643
Pubmed

RNA-binding proteins with basic-acidic dipeptide (BAD) domains self-assemble and aggregate in Alzheimer's disease.

CEP170 RBM15 SAFB RPL37 SRSF4 GTF3C1 PNN BCLAF1 SLTM PRPF38B SREK1 DEK THRAP3

1.13e-09713681329802200
Pubmed

Regulation of alternative splicing by SRrp86 and its interacting proteins.

SAFB SRSF4 PNN SREK1 SSRP1 THRAP3

1.50e-095768614559993
Pubmed

Characterizing ZC3H18, a Multi-domain Protein at the Interface of RNA Production and Destruction Decisions.

RBM15 SAFB RPL37 DDX46 SRSF4 PNN TCOF1 BCLAF1 SLTM PRPF38B SSRP1 DEK THRAP3

1.52e-09731681329298432
Pubmed

The E3 ubiquitin ligase HECTD1 contributes to cell proliferation through an effect on mitosis.

CEP170 CUL3 RIF1 RBM15 DDX46 TENT4B GTF3C1 PNN MYCBP2 ATAD5 PHF3 SSRP1 DEK

2.39e-09759681335915203
Pubmed

Transcription factor Foxp3 and its protein partners form a complex regulatory network.

CUL3 RIF1 RBM15 GTF3C1 ATAD5 PHF3 BCLAF1 SLTM CHD8 MIDEAS

2.77e-09370681022922362
Pubmed

PRISMA and BioID disclose a motifs-based interactome of the intrinsically disordered transcription factor C/EBPα.

CEP170 CUL3 KMT2C RBM15 ZNF609 SAFB GTF3C1 MYCBP2 BCLAF1 PRPF38B CHD8 SSRP1 MIDEAS DEK THRAP3

2.77e-091103681534189442
Pubmed

A probability-based approach for high-throughput protein phosphorylation analysis and site localization.

RIF1 RBM15 SAFB GTF3C1 PNN TCOF1 PHF3 BCLAF1 CHD8 THRAP3 USP47

3.79e-09503681116964243
Pubmed

Prediction of the coding sequences of mouse homologues of KIAA gene: III. the complete nucleotide sequences of 500 mouse KIAA-homologous cDNAs identified by screening of terminal sequences of cDNA clones randomly sampled from size-fractionated libraries.

CUL3 KMT2C STOX2 ZNF609 DDX46 UBAP2 ZNF608 BCLAF1 HECTD4 CHD8 RIMS2

6.38e-09529681114621295
Pubmed

HIV-1 Vpr induces cell cycle arrest and enhances viral gene expression by depleting CCDC137.

SAFB PNN TCOF1 BCLAF1 SLTM MIDEAS THRAP3

1.71e-0814868732538781
Pubmed

Menin and Menin-Associated Proteins Coregulate Cancer Energy Metabolism.

RIF1 DDX46 GTF3C1 TCOF1 BCLAF1 CHD8 CHD1 MIDEAS THRAP3

2.23e-0834168932971831
Pubmed

A novel role for the peptidyl-prolyl cis-trans isomerase Cyclophilin A in DNA-repair following replication fork stalling via the MRE11-RAD50-NBS1 complex.

CEP170 UIMC1 RIF1 ZNF609 SAFB PHF3 PRPF38B CHD8 CHD1 MIDEAS

2.77e-08472681038943005
Pubmed

Pinin/DRS/memA interacts with SRp75, SRm300 and SRrp130 in corneal epithelial cells.

SRSF4 PNN PNISR

2.86e-08468314578391
Pubmed

Human Antiviral Protein IFIX Suppresses Viral Gene Expression during Herpes Simplex Virus 1 (HSV-1) Infection and Is Counteracted by Virus-induced Proteasomal Degradation.

CUL3 SAFB SRSF4 TCOF1 PHF3 CHD1 SSRP1 PYHIN1

3.35e-0825168828077445
Pubmed

Spatiotemporal profile of postsynaptic interactomes integrates components of complex brain disorders.

CEP170 CUL3 STOX2 UBAP2 ANK3 TCOF1 MYCBP2 BCLAF1 KCTD16 HECTD4 ADGRB2 CHD8 THRAP3

3.98e-08963681328671696
Pubmed

Proteomic profiling of VCP substrates links VCP to K6-linked ubiquitylation and c-Myc function.

RIF1 RBM15 SAFB ABCF3 GTF3C1 PNN MYCBP2 SLTM RICTOR CHD8 CHD1 SSRP1 MIDEAS ARMCX1 THRAP3

4.18e-081353681529467282
Pubmed

Circular RNA circPVT1 promotes nasopharyngeal carcinoma metastasis via the β-TrCP/c-Myc/SRSF1 positive feedback loop.

CEP170 ZNF609 SAFB UBAP2 PNN TCOF1 BCLAF1 THRAP3

4.40e-0826068836199071
Pubmed

Proximity biotinylation and affinity purification are complementary approaches for the interactome mapping of chromatin-associated protein complexes.

CEP170 CUL3 UIMC1 RBM15 ZNF608 MYCBP2 ATAD5 BCLAF1 SLTM SERF1A THRAP3

4.83e-08645681125281560
Pubmed

Gain of Additional BIRC3 Protein Functions through 3'-UTR-Mediated Protein Complex Formation.

RIF1 RBM15 SAFB TENT4B GTF3C1 PNN TCOF1 BCLAF1 KCTD16 SLTM CHD1 SREK1 SSRP1 DEK THRAP3

8.22e-081425681530948266
Pubmed

Human transcription factor protein interaction networks.

UIMC1 KMT2C RIF1 ZNF609 RPL37 UBAP2 LHX4 ATN1 GTF3C1 ZNF608 PNN ATAD5 CHD8 LHX3 MIDEAS

8.52e-081429681535140242
Pubmed

The functional interactome landscape of the human histone deacetylase family.

RIF1 ZNF609 PNN MYCBP2 BCLAF1 MIDEAS THRAP3 USP47

9.90e-0828968823752268
Pubmed

R2TP/Prefoldin-like component RUVBL1/RUVBL2 directly interacts with ZNHIT2 to regulate assembly of U5 small nuclear ribonucleoprotein.

DDX46 SRSF4 TCOF1 RICTOR PRPF38B CHD1 SREK1 PNISR

1.32e-0730068828561026
Pubmed

Identification of Wilms' tumor 1-associating protein complex and its role in alternative splicing and the cell cycle.

RBM15 BCLAF1 THRAP3

1.42e-07668324100041
Pubmed

RSPO-LGR4 functions via IQGAP1 to potentiate Wnt signaling.

SAFB TCOF1 MYCBP2 CPD POTEJ THRAP3 OTUD7B

1.44e-0720268724639526
Pubmed

Identification of proximal SUMO-dependent interactors using SUMO-ID.

CEP170 UIMC1 ZNF609 SAFB ABCF3 ZNF608 PHF3 SLTM CHD8

2.10e-0744468934795231
Pubmed

BAP1 regulation of the key adaptor protein NCoR1 is critical for γ-globin gene repression.

RBM15 SAFB RPL37 DDX46 SRSF4 PNN TCOF1 PRPF38B CHD8 CHD1 SREK1 SSRP1 DEK THRAP3

2.14e-071318681430463901
Pubmed

N-Terminal Acetyltransferase Naa40p Whereabouts Put into N-Terminal Proteoform Perspective.

CEP170 UIMC1 RIF1 SAFB DDX46 UBAP2 PNN TCOF1 ATAD5 BCLAF1 PRPF38B CHD1

2.40e-07934681233916271
Pubmed

CHD1 associates with NCoR and histone deacetylase as well as with RNA splicing proteins.

SAFB BCLAF1 CHD1

2.49e-07768312890497
Pubmed

CHD3 and CHD4 form distinct NuRD complexes with different yet overlapping functionality.

RBM15 SAFB DDX46 PNN TCOF1 ATAD5 BCLAF1 SSRP1 DEK THRAP3

2.77e-07605681028977666
Pubmed

The in vivo Interaction Landscape of Histones H3.1 and H3.3.

UIMC1 RIF1 GTF3C1 ATAD5 PHF3 CHD8 CHD1 SSRP1 MIDEAS DEK

2.90e-07608681036089195
Pubmed

HDLBP Promotes Hepatocellular Carcinoma Proliferation and Sorafenib Resistance by Suppressing Trim71-dependent RAF1 Degradation.

CEP170 RIF1 RBM15 DDX46 UBAP2 TCOF1 PHF3 BCLAF1 PRPF38B POTEJ SSRP1 MIDEAS DEK THRAP3

3.44e-071371681436244648
Pubmed

Ubiquitin-Independent Disassembly by a p97 AAA-ATPase Complex Drives PP1 Holoenzyme Formation.

UIMC1 RIF1 RBM15 SRSF4 PNN MYCBP2 BCLAF1 THRAP3

5.36e-0736168830344098
Pubmed

Acetylation of ELF5 suppresses breast cancer progression by promoting its degradation and targeting CCND1.

CUL3 RIF1 RBM15 SAFB DDX46 ABCF3 SRSF4 SLTM SSRP1 CWF19L1

5.55e-07653681033742100
Pubmed

SMYD3 Impedes Small Cell Lung Cancer Sensitivity to Alkylation Damage through RNF113A Methylation-Phosphorylation Cross-talk.

ZNF609 DDX46 GTF3C1 PNN TCOF1 BCLAF1 CHD1 SREK1 MIDEAS THRAP3

5.71e-07655681035819319
Pubmed

Nuclear actin interactome analysis links actin to KAT14 histone acetyl transferase and mRNA splicing.

RIF1 DDX46 TCOF1 PHF3 BCLAF1 POTEI POTEJ PNISR THRAP3

6.26e-0750668930890647
Pubmed

In-Depth In Vivo Crosslinking in Minutes by a Compact, Membrane-Permeable, and Alkynyl-Enrichable Crosslinker.

UIMC1 SAFB STXBP1 GTF3C1 ZNF608 PNN BCLAF1 SREK1 POTEI POTEJ SSRP1 RIMS2 PNISR THRAP3

6.29e-071442681435575683
Pubmed

Charting the landscape of tandem BRCT domain-mediated protein interactions.

UIMC1 SAFB SRSF4 GTF3C1 PNN TCOF1 BCLAF1 RICTOR DEK THRAP3

7.01e-07670681022990118
Pubmed

Genetic and Proteomic Interrogation of Lower Confidence Candidate Genes Reveals Signaling Networks in β-Catenin-Active Cancers.

RBM15 ZNF609 ABCF3 SRSF4 ATN1 ZNF608 PNN TCOF1 PHF3 BCLAF1 PRPF38B SSRP1 THRAP3

7.63e-071247681327684187
Pubmed

A bead-based approach for large-scale identification of in vitro kinase substrates.

SAFB PNN BCLAF1 SSRP1 DEK THRAP3

8.32e-0716368622113938
Pubmed

Proximity-dependent Mapping of the Androgen Receptor Identifies Kruppel-like Factor 4 as a Functional Partner.

ZNF609 ATN1 ZNF608 PNN PHF3 CHD8 MIDEAS

9.68e-0726868733640491
Pubmed

The RNA-mediated estrogen receptor α interactome of hormone-dependent human breast cancer cell nuclei.

UIMC1 KMT2C RIF1 DDX46 TENT4B ATAD5 PHF3 RICTOR PRPF38B CHD8 CHD1 SREK1 SSRP1 PNISR

9.81e-071497681431527615
Pubmed

Spatiotemporal-resolved protein networks profiling with photoactivation dependent proximity labeling.

CEP170 SAFB UBAP2 PNN TCOF1 BCLAF1 DEK THRAP3

1.13e-0639968835987950
Pubmed

CAMK2D serves as a molecular scaffold for RNF8-MAD2 complex to induce mitotic checkpoint in glioma.

TCOF1 BCLAF1 SSRP1 PNISR THRAP3

1.18e-069468537468549
Pubmed

Synaptic GAP and GEF Complexes Cluster Proteins Essential for GTP Signaling.

CUL3 STXBP1 ANK3 PHF3 KCTD16 ADGRB2 RIMS2

1.33e-0628168728706196
Pubmed

Mapping the Ku Interactome Using Proximity-Dependent Biotin Identification in Human Cells.

RIF1 DDX46 PHF3 BCLAF1 CHD8 SSRP1 THRAP3

1.39e-0628368730585729
Pubmed

Transcription factor protein interactomes reveal genetic determinants in heart disease.

RBM15 SAFB GTF3C1 BCLAF1 SLTM CHD8 CHD1 THRAP3

1.41e-0641168835182466
Pubmed

Delineating the HMGB1 and HMGB2 interactome in prostate and ovary epithelial cells and its relationship with cancer.

SAFB PNN BCLAF1 SLTM SSRP1 THRAP3

1.91e-0618868629721183
Pubmed

Neuron-specific protein network mapping of autism risk genes identifies shared biological mechanisms and disease-relevant pathologies.

CEP170 SAFB UBAP2 STXBP1 ANK3 MYCBP2 BCLAF1 KCTD16 ADGRB2 RICTOR PRPF38B THRAP3

1.93e-061139681236417873
Pubmed

Direct interaction between hnRNP-M and CDC5L/PLRG1 proteins affects alternative splice site choice.

RIF1 RBM15 DDX46 ABCF3 SRSF4 PNN CHD8 SREK1 THRAP3

1.98e-0658268920467437
Pubmed

TBK1 phosphorylation activates LIR-dependent degradation of the inflammation repressor TNIP1.

UIMC1 RBM15 SAFB DDX46 PNN TCOF1 BCLAF1 SLTM SSRP1 DEK THRAP3

2.18e-06949681136574265
Pubmed

FBW7 suppresses ovarian cancer development by targeting the N6-methyladenosine binding protein YTHDF2.

CEP170 SRSF4 GTF3C1 BCLAF1 RICTOR CHD1 SSRP1 THRAP3 CWF19L1

2.58e-0660168933658012
Pubmed

Comparative interactome analysis of α-arrestin families in human and Drosophila.

RBM15 GTF3C1 PNN BCLAF1 CPD THRAP3 CWF19L1

2.71e-0631368738270169
Pubmed

DNA Repair Network Analysis Reveals Shieldin as a Key Regulator of NHEJ and PARP Inhibitor Sensitivity.

UIMC1 RIF1 ZNF609 DDX46 GTF3C1 ATAD5 PHF3 MIDEAS

2.91e-0645368829656893
Pubmed

The interactome of CLUH reveals its association to SPAG5 and its co-translational proximity to mitochondrial proteins.

SAFB UBAP2 SRSF4 TCOF1 SLTM THRAP3

2.97e-0620368635012549
Pubmed

Pax6 controls progenitor cell identity and neuronal fate in response to graded Shh signaling.

LHX4 LHX3 SIM1

3.20e-06156839230312
Pubmed

Dynamic Protein Interactions of the Polycomb Repressive Complex 2 during Differentiation of Pluripotent Cells.

KMT2C GTF3C1 SLTM CHD8 CHD1 SSRP1 DEK ARMCX1

3.75e-0646968827634302
Pubmed

Differential localization of Mox-1 and Mox-2 proteins indicates distinct roles during development.

MEOX1 MEOX2

3.77e-0626829032023
Pubmed

CHD1 interacts with SSRP1 and depends on both its chromodomain and its ATPase/helicase-like domain for proper association with chromatin.

CHD1 SSRP1

3.77e-06268210199952
Pubmed

Pathophysiology of syndromic combined pituitary hormone deficiency due to a LHX3 defect in light of LHX3 and LHX4 expression during early human development.

LHX4 LHX3

3.77e-06268215567726
Pubmed

The single amphioxus Mox gene: insights into the functional evolution of Mox genes, somites, and the asymmetry of amphioxus somitogenesis.

MEOX1 MEOX2

3.77e-06268212051829
Pubmed

Reciprocal regulation of Rag expression in thymocytes by the zinc-finger proteins, Zfp608 and Zfp609.

ZNF609 ZNF608

3.77e-06268223076336
Pubmed

Molecular cloning and expression analysis of the mouse Spot-2 gene in pituitary development.

LHX4 LHX3

3.77e-06268212684778
Pubmed

Btf and TRAP150 have distinct roles in regulating subcellular mRNA distribution.

BCLAF1 THRAP3

3.77e-06268223778535
Pubmed

The RNA processing factors THRAP3 and BCLAF1 promote the DNA damage response through selective mRNA splicing and nuclear export.

BCLAF1 THRAP3

3.77e-06268229112714
Pubmed

Lhx4 surpasses its paralog Lhx3 in promoting the differentiation of spinal V2a interneurons.

LHX4 LHX3

3.77e-06268238970652
Pubmed

ZBTB2 protein is a new partner of the Nucleosome Remodeling and Deacetylase (NuRD) complex.

SAFB SRSF4 PNN BCLAF1 CHD1 SSRP1 THRAP3

3.84e-0633068733301849
Pubmed

Proximity labeling of endogenous RICTOR identifies mTOR complex 2 regulation by ADP ribosylation factor ARF1.

UIMC1 DDX46 UBAP2 GTF3C1 RICTOR THRAP3

4.14e-0621568635973513
Pubmed

Suppression of ACE2 SUMOylation protects against SARS-CoV-2 infection through TOLLIP-mediated selective autophagy.

RBM15 RPL37 DDX46 PNN TCOF1 BCLAF1 SSRP1 DEK THRAP3

4.34e-0664168936057605
Pubmed

TRIM33 drives prostate tumor growth by stabilizing androgen receptor from Skp2-mediated degradation.

KMT2C ZNF609 DDX46 SSRP1 MIDEAS THRAP3

4.72e-0622068635785414
Pubmed

Identifications of novel host cell factors that interact with the receptor-binding domain of the SARS-CoV-2 spike protein.

CUL3 ZNF609 ATN1 GTF3C1 SLTM RICTOR CHD8 CWF19L1 PLCE1

4.86e-0665068938777146
Pubmed

Proteomic characterization of chromosomal common fragile site (CFS)-associated proteins uncovers ATRX as a regulator of CFS stability.

RIF1 RBM15 SAFB PNN TCOF1 ATAD5 BCLAF1 SLTM THRAP3

4.98e-0665268931180492
Pubmed

Targeting USP10 induces degradation of oncogenic ANLN in esophageal squamous cell carcinoma.

CEP170 CUL3 RBM15 SAFB TENT4B GTF3C1 PNN PHF3 BCLAF1 SLTM SSRP1 THRAP3

5.29e-061257681236526897
Pubmed

Genome-wide CRISPR screen identifies HNRNPL as a prostate cancer dependency regulating RNA splicing.

CEP170 PRUNE2 KMT2C ZNF609 GTF3C1 ANK3 ZNF608 MYCBP2 HECTD4 WDR27 PRPF38B CPD THRAP3

5.37e-061489681328611215
Pubmed

Construction of expression-ready cDNA clones for KIAA genes: manual curation of 330 KIAA cDNA clones.

PRUNE2 KMT2C ZNF608 MYCBP2 PHF3 CHD8

5.37e-0622568612168954
Pubmed

ZZW-115-dependent inhibition of NUPR1 nuclear translocation sensitizes cancer cells to genotoxic agents.

RBM15 SAFB DDX46 SRSF4 PNN BCLAF1 POTEJ DEK THRAP3

5.49e-0666068932780723
Pubmed

Impaired plasma membrane localization of ubiquitin ligase complex underlies 3-M syndrome development.

PRUNE2 RBM15 RPL37 SLTM PRPF38B CHD1 POTEJ MIDEAS

5.65e-0649668831343991
Pubmed

Complementary proteomics strategies capture an ataxin-1 interactome in Neuro-2a cells.

ZNF609 DDX46 UBAP2 STXBP1 PNN TCOF1 BCLAF1 DEK THRAP3

5.84e-0666568930457570
Pubmed

SPATA2-Mediated Binding of CYLD to HOIP Enables CYLD Recruitment to Signaling Complexes.

CEP170 UBAP2 SRSF4 PNN TCOF1 BCLAF1 THRAP3

5.96e-0635368727545878
Pubmed

The protein interaction landscape of the human CMGC kinase group.

RBM15 DDX46 SRSF4 PNN TCOF1 PHF3 BCLAF1 SREK1 THRAP3

8.31e-0669568923602568
Pubmed

Systematic mapping of genetic interactions for de novo fatty acid synthesis identifies C12orf49 as a regulator of lipid metabolism.

KMT2C RBM15 ZNF609 SAFB DDX46 SLTM WSB2 RICTOR PRPF38B CHD8 CHD1 SREK1

9.14e-061327681232694731
Pubmed

Interactome Rewiring Following Pharmacological Targeting of BET Bromodomains.

RIF1 GTF3C1 PNN ATAD5 CHD8 CHD1 SSRP1 DEK

9.53e-0653368830554943
Pubmed

Proteomic, functional, and domain-based analysis of in vivo 14-3-3 binding proteins involved in cytoskeletal regulation and cellular organization.

CEP170 PNN MYCBP2 BCLAF1 PRPF38B THRAP3

1.10e-0525568615324660
Pubmed

BCLAF1-induced HIF-1α accumulation under normoxia enhances PD-L1 treatment resistances via BCLAF1-CUL3 complex.

CUL3 BCLAF1

1.13e-05368237906282
Pubmed

Food Anticipatory Activity on Circadian Time Scales Is Not Dependent on Central Serotonin: Evidence From Tryptophan Hydroxylase-2 and Serotonin Transporter Knockout Mice.

TPH2 MEOX2

1.13e-05368233041772
Pubmed

Expression and function of the LIM homeobox containing genes Lhx3 and Lhx4 in the mouse placenta.

LHX4 LHX3

1.13e-05368218425848
InteractionMEN1 interactions

KMT2C RIF1 RBM15 ZNF609 SAFB DDX46 UBAP2 TENT4B SRSF4 ATN1 GTF3C1 ZNF608 PNN TCOF1 BCLAF1 SLTM CHD8 CHD1 SREK1 SSRP1 MIDEAS DEK THRAP3

1.35e-1310296823int:MEN1
InteractionSMC5 interactions

CEP170 UIMC1 RIF1 RBM15 ZNF609 SAFB DDX46 UBAP2 SRSF4 PNN ATAD5 PHF3 BCLAF1 SLTM CHD8 CHD1 SREK1 SSRP1 MIDEAS DEK THRAP3

6.70e-1210006821int:SMC5
InteractionSRPK2 interactions

CEP170 CUL3 RBM15 SAFB RPL37 DDX46 SRSF4 ANK3 PNN TCOF1 MYCBP2 BCLAF1 SLTM PRPF38B SREK1 PNISR THRAP3 PYHIN1

1.63e-117176818int:SRPK2
InteractionYAP1 interactions

CEP170 KMT2C DDX46 UBAP2 ATN1 GTF3C1 ANK3 PNN TCOF1 PHF3 BCLAF1 CHD8 CHD1 POTEI POTEJ SSRP1 MIDEAS THRAP3 USP47 OTUD7B

2.87e-1010956820int:YAP1
InteractionDDX23 interactions

RBM15 SAFB DDX46 SRSF4 PNN TCOF1 PHF3 BCLAF1 SLTM CHD1 SREK1 SSRP1 PNISR THRAP3

5.96e-104806814int:DDX23
InteractionSRSF11 interactions

CUL3 DDX46 SRSF4 PNN BCLAF1 PRPF38B SREK1 PNISR THRAP3 MEOX2

1.51e-092036810int:SRSF11
InteractionMYCN interactions

CEP170 CUL3 RBM15 ZNF609 SAFB RPL37 DDX46 SRSF4 GTF3C1 PNN TCOF1 PHF3 BCLAF1 SLTM PRPF38B POTEI SSRP1 MIDEAS DEK THRAP3 CWF19L1

2.30e-0913736821int:MYCN
InteractionDHX8 interactions

CUL3 RBM15 SAFB DDX46 SRSF4 PNN BCLAF1 SLTM CHD1 PNISR THRAP3

3.61e-092926811int:DHX8
InteractionMECP2 interactions

CEP170 RBM15 SAFB DDX46 SRSF4 GTF3C1 PNN TCOF1 MYCBP2 BCLAF1 HECTD4 SLTM PRPF38B SREK1 SIM1 SSRP1 PNISR DEK THRAP3 PYHIN1

4.72e-0912876820int:MECP2
InteractionOBSL1 interactions

PRUNE2 RIF1 RBM15 SAFB RPL37 DDX46 GTF3C1 PNN TCOF1 BCLAF1 SLTM PRPF38B CHD1 SSRP1 MIDEAS DEK THRAP3

5.22e-099026817int:OBSL1
InteractionZC3H14 interactions

CUL3 UBAP2 SRSF4 PNN WSB2 RICTOR SSRP1 THRAP3 PYHIN1

5.34e-09169689int:ZC3H14
InteractionDOT1L interactions

RIF1 RBM15 SAFB DDX46 UBAP2 TENT4B SRSF4 GTF3C1 PNN TCOF1 PHF3 SLTM CHD1 SSRP1 DEK THRAP3

7.88e-098076816int:DOT1L
InteractionNUP43 interactions

RIF1 RBM15 ZNF609 SAFB ATN1 ZNF608 PNN BCLAF1 RICTOR CHD8 CHD1 SREK1 SSRP1 MIDEAS

1.73e-086256814int:NUP43
InteractionSNRNP40 interactions

RBM15 ZNF609 TENT4B ATN1 ZNF608 PNN TCOF1 ATAD5 BCLAF1 CHD1 SREK1 SSRP1 PNISR MIDEAS

2.20e-086376814int:SNRNP40
InteractionCD2BP2 interactions

CUL3 DDX46 SRSF4 PNN BCLAF1 PRPF38B SSRP1 PNISR THRAP3

8.31e-08232689int:CD2BP2
InteractionCSNK2A1 interactions

CEP170 CUL3 SAFB ATN1 PNN TCOF1 ATAD5 BCLAF1 RICTOR LHX3 SREK1 SSRP1 DEK THRAP3 MEOX1 MEOX2

8.35e-089566816int:CSNK2A1
InteractionSNRNP70 interactions

CEP170 CUL3 RBM15 SAFB RPL37 SRSF4 GTF3C1 PNN BCLAF1 SLTM PRPF38B SREK1 SSRP1 DEK THRAP3 PYHIN1

1.24e-079846816int:SNRNP70
InteractionSIRT7 interactions

CEP170 RIF1 RBM15 DDX46 SRSF4 GTF3C1 PNN TCOF1 MYCBP2 PHF3 SLTM CHD8 CHD1 USP47

1.50e-077446814int:SIRT7
InteractionRNPS1 interactions

CUL3 DDX46 SRSF4 GTF3C1 PNN WSB2 SREK1 SSRP1 PNISR DEK THRAP3

1.68e-074256811int:RNPS1
InteractionZC3H18 interactions

CUL3 RBM15 SAFB RPL37 DDX46 SRSF4 PNN TCOF1 BCLAF1 SLTM PRPF38B SSRP1 DEK THRAP3 PYHIN1

1.73e-078776815int:ZC3H18
InteractionHNF1B interactions

KMT2C ZNF609 LHX4 ZNF608 TCOF1 BCLAF1 MIDEAS THRAP3

2.46e-07190688int:HNF1B
InteractionTHRAP3 interactions

SRSF4 PNN TCOF1 MYCBP2 BCLAF1 LMOD1 RICTOR SREK1 SSRP1 DEK THRAP3

2.54e-074436811int:THRAP3
InteractionTERF2IP interactions

CUL3 UIMC1 RIF1 ZNF609 GTF3C1 ZNF608 ATAD5 PHF3 CHD8 CHD1 SREK1 SSRP1

2.85e-075526812int:TERF2IP
InteractionRPA4 interactions

CEP170 RIF1 SAFB UBAP2 TENT4B TCOF1 BCLAF1 SLTM RICTOR SSRP1 THRAP3

3.10e-074526811int:RPA4
InteractionPHIP interactions

CEP170 CUL3 ZNF609 ZNF608 RICTOR CHD1 SSRP1 PYHIN1

3.24e-07197688int:PHIP
InteractionH2BC8 interactions

CUL3 UIMC1 RIF1 GTF3C1 ATAD5 PHF3 CHD8 CHD1 SSRP1 MIDEAS DEK CWF19L1

4.49e-075766812int:H2BC8
InteractionCEBPA interactions

CEP170 CUL3 KMT2C RBM15 ZNF609 SAFB GTF3C1 PNN MYCBP2 BCLAF1 PRPF38B CHD8 CHD1 SSRP1 MIDEAS DEK THRAP3

5.54e-0712456817int:CEBPA
InteractionSNRPA interactions

CUL3 RBM15 SAFB SRSF4 LHX4 PNN PHF3 BCLAF1 SLTM SSRP1 THRAP3

5.86e-074826811int:SNRPA
InteractionPEA15 interactions

CEP170 SAFB DDX46 TENT4B SLTM PRPF38B

5.87e-0790686int:PEA15
InteractionRNF4 interactions

CUL3 UIMC1 RIF1 ZNF609 SAFB UBAP2 TENT4B ATN1 ZNF608 PNN TCOF1 PHF3 BCLAF1 PRPF38B CHD8 CHD1 CPD THRAP3

6.51e-0714126818int:RNF4
InteractionCLK1 interactions

CUL3 RBM15 SAFB SRSF4 PNN PHF3 BCLAF1 THRAP3

7.23e-07219688int:CLK1
InteractionPHF20 interactions

KMT2C ZNF609 ATN1 ZNF608 CHD8

9.53e-0753685int:PHF20
InteractionCIT interactions

CEP170 CUL3 RIF1 RBM15 SAFB DDX46 PNN TCOF1 BCLAF1 PRPF38B CHD8 CHD1 SREK1 POTEJ SSRP1 DEK THRAP3 PYHIN1

9.57e-0714506818int:CIT
InteractionTAF15 interactions

CUL3 ZNF609 SAFB DDX46 PNN MYCBP2 BCLAF1 SLTM SSRP1 THRAP3

1.06e-064086810int:TAF15
InteractionH3-3A interactions

CUL3 UIMC1 KMT2C RIF1 GTF3C1 ATAD5 PHF3 CHD8 CHD1 SSRP1 MIDEAS DEK THRAP3

1.10e-067496813int:H3-3A
InteractionSIRT6 interactions

CEP170 UBAP2 ABCF3 GTF3C1 TCOF1 MYCBP2 PHF3 BCLAF1 HECTD4 RICTOR CHD8 SSRP1

1.12e-066286812int:SIRT6
InteractionPARP1 interactions

CEP170 CUL3 UIMC1 UBAP2 TENT4B GTF3C1 PNN MYCBP2 ATAD5 PHF3 RICTOR CHD1 SREK1 SSRP1 THRAP3 CWF19L1 PYHIN1

1.20e-0613166817int:PARP1
InteractionHNRNPC interactions

CUL3 SAFB SRSF4 PNN TCOF1 BCLAF1 SREK1 SSRP1 THRAP3 CWF19L1 USP47 MEOX2

1.23e-066346812int:HNRNPC
InteractionPPIA interactions

CEP170 CUL3 UIMC1 RIF1 ZNF609 SAFB DDX46 ANK3 PNN PHF3 PRPF38B CHD8 CHD1 MIDEAS

1.26e-068886814int:PPIA
InteractionBCLAF1 interactions

CUL3 PNN TCOF1 MYCBP2 BCLAF1 WSB2 CHD1 SSRP1 THRAP3

1.48e-06327689int:BCLAF1
InteractionH3C1 interactions

UIMC1 KMT2C RIF1 GTF3C1 ANK3 ATAD5 PHF3 CHD8 CHD1 SSRP1 MIDEAS DEK THRAP3 CWF19L1

1.49e-069016814int:H3C1
InteractionCBX3 interactions

CUL3 UIMC1 RIF1 GTF3C1 TCOF1 ATAD5 PHF3 CHD8 CHD1 SSRP1 DEK CWF19L1

1.50e-066466812int:CBX3
InteractionFOXP3 interactions

CUL3 RIF1 RBM15 GTF3C1 ATAD5 PHF3 BCLAF1 SLTM CHD8 MIDEAS

1.77e-064326810int:FOXP3
InteractionZNF330 interactions

CUL3 TENT4B GTF3C1 ATAD5 PHF3 CHD1 SSRP1 MIDEAS DEK MEOX2

2.35e-064466810int:ZNF330
InteractionZNF354C interactions

CUL3 LHX4 RICTOR LHX3

2.64e-0629684int:ZNF354C
InteractionIFI27L1 interactions

SAFB DDX46 SLTM PRPF38B SREK1

2.66e-0665685int:IFI27L1
InteractionSSRP1 interactions

RIF1 RBM15 SAFB PNN PHF3 BCLAF1 SLTM CHD1 SREK1 SSRP1 THRAP3 PYHIN1

2.75e-066856812int:SSRP1
InteractionNR2C2 interactions

RBM15 SAFB RPL37 DDX46 SRSF4 LHX4 PNN TCOF1 PRPF38B CHD8 CHD1 LHX3 SREK1 SSRP1 DEK THRAP3 PYHIN1

2.87e-0614036817int:NR2C2
InteractionRAD18 interactions

RBM15 SAFB SRSF4 BCLAF1 PRPF38B CHD1 CPD SSRP1 PNISR THRAP3

2.92e-064576810int:RAD18
InteractionRNF113A interactions

CUL3 RIF1 ZNF609 DDX46 GTF3C1 PNN TCOF1 BCLAF1 CHD1 SREK1 MIDEAS THRAP3

3.05e-066926812int:RNF113A
InteractionPRC1 interactions

RBM15 SAFB RPL37 DDX46 PNN BCLAF1 ADGRB2 SLTM PRPF38B CHD1 POTEJ SSRP1 DEK THRAP3

3.66e-069736814int:PRC1
InteractionNAA40 interactions

CEP170 CUL3 UIMC1 RIF1 SAFB DDX46 UBAP2 PNN TCOF1 ATAD5 BCLAF1 PRPF38B CHD1 SSRP1

3.89e-069786814int:NAA40
InteractionHECTD1 interactions

CEP170 CUL3 RIF1 RBM15 DDX46 TENT4B GTF3C1 PNN MYCBP2 ATAD5 PHF3 PRPF38B SSRP1 DEK

4.17e-069846814int:HECTD1
InteractionSRPK1 interactions

CUL3 SAFB RPL37 DDX46 SRSF4 PNN BCLAF1 SREK1 SSRP1 THRAP3

4.27e-064776810int:SRPK1
InteractionFOXL1 interactions

KMT2C RIF1 ZNF609 ABCF3 GTF3C1 ZNF608 MIDEAS

4.34e-06196687int:FOXL1
InteractionUHRF2 interactions

CUL3 RIF1 PHF3 BCLAF1 CHD8 SSRP1 THRAP3

4.96e-06200687int:UHRF2
InteractionRBBP5 interactions

CUL3 KMT2C ATN1 TCOF1 CHD8 LHX3 SSRP1 PYHIN1

5.41e-06287688int:RBBP5
InteractionH3C3 interactions

UIMC1 RIF1 GTF3C1 ATAD5 PHF3 CHD8 CHD1 SSRP1 MIDEAS DEK

5.92e-064956810int:H3C3
InteractionMAPKAPK2 interactions

CUL3 SAFB DDX46 PHF3 SLTM SREK1

6.03e-06134686int:MAPKAPK2
InteractionKMT2C interactions

CUL3 KMT2C LHX4 ATN1 TCOF1 LHX3

6.03e-06134686int:KMT2C
InteractionFUS interactions

CUL3 SAFB UBAP2 SRSF4 PNN MYCBP2 PHF3 BCLAF1 SLTM GARIN1B THRAP3 PLCE1

7.62e-067576812int:FUS
InteractionACIN1 interactions

CUL3 SAFB ABCF3 SRSF4 PNN WSB2 SSRP1 THRAP3

7.67e-06301688int:ACIN1
InteractionPNN interactions

SRSF4 PNN BCLAF1 WSB2 SREK1 SSRP1 PNISR THRAP3

7.85e-06302688int:PNN
InteractionRBBP6 interactions

CUL3 SRSF4 PNN BCLAF1 POTEI SSRP1 THRAP3

8.21e-06216687int:RBBP6
InteractionNFIB interactions

KMT2C ZNF609 LHX4 ZNF608 LHX3 MIDEAS

8.41e-06142686int:NFIB
InteractionSAP18 interactions

SAFB ABCF3 GTF3C1 PNN PRPF38B SREK1 SSRP1 THRAP3

8.44e-06305688int:SAP18
InteractionBRD7 interactions

CEP170 RIF1 RPL37 DDX46 SRSF4 LHX4 BCLAF1 LHX3 SSRP1 THRAP3 CWF19L1

8.61e-066376811int:BRD7
InteractionKIF20A interactions

CEP170 CUL3 SAFB RPL37 DDX46 PNN BCLAF1 HECTD4 CHD8 CHD1 POTEJ SSRP1 DEK THRAP3

8.97e-0610526814int:KIF20A
InteractionCLK3 interactions

RBM15 SRSF4 PNN BCLAF1 SLTM PRPF38B THRAP3

9.25e-06220687int:CLK3
InteractionARL4D interactions

RIF1 TENT4B ABCF3 TCOF1 BCLAF1 THRAP3

9.86e-06146686int:ARL4D
InteractionZNF609 interactions

CUL3 ZNF609 LHX4 ATN1 ZNF608 LHX3

9.86e-06146686int:ZNF609
InteractionMDC1 interactions

UIMC1 RIF1 GTF3C1 ATAD5 PHF3 MIDEAS THRAP3 USP47 PYHIN1

1.01e-05414689int:MDC1
InteractionGSC interactions

KMT2C ZNF609 ATN1 ZNF608 MIDEAS

1.12e-0587685int:GSC
InteractionWWTR1 interactions

CEP170 UBAP2 GTF3C1 ANK3 PNN MYCBP2 PHF3 CHD8 SSRP1

1.17e-05422689int:WWTR1
InteractionWDR5 interactions

CUL3 KMT2C RBM15 DDX46 UBAP2 ATN1 ZNF608 BCLAF1 RICTOR CHD8 SSRP1 DEK THRAP3 MEOX2

1.50e-0511016814int:WDR5
InteractionSOX2 interactions

CEP170 KMT2C RBM15 ZNF609 SRSF4 GTF3C1 ZNF608 ATAD5 BCLAF1 SLTM WDR27 CHD8 SSRP1 MIDEAS THRAP3 OTUD7B

1.53e-0514226816int:SOX2
InteractionSNRPC interactions

CUL3 SAFB SRSF4 PNN PHF3 BCLAF1 SREK1 SSRP1 THRAP3

1.64e-05440689int:SNRPC
InteractionLINC02910 interactions

SAFB DDX46 SLTM PRPF38B SREK1

1.73e-0595685int:LINC02910
InteractionZBTB2 interactions

SAFB SRSF4 LHX4 PNN BCLAF1 CHD1 SSRP1 THRAP3 MEOX2

1.95e-05450689int:ZBTB2
InteractionAURKA interactions

CUL3 UIMC1 SAFB RPL37 TCOF1 MYCBP2 SSRP1 PNISR THRAP3 USP47 OTUD7B

1.97e-056966811int:AURKA
InteractionTOP1 interactions

CUL3 RBM15 SAFB GTF3C1 PNN TCOF1 PHF3 BCLAF1 SLTM SSRP1 THRAP3

1.97e-056966811int:TOP1
InteractionH2BC21 interactions

CUL3 UIMC1 RIF1 PNN ATAD5 PHF3 BCLAF1 CHD8 SSRP1 MIDEAS DEK

1.97e-056966811int:H2BC21
InteractionSF3B1 interactions

CUL3 RBM15 DDX46 PNN MYCBP2 BCLAF1 RICTOR SSRP1 DEK THRAP3

2.04e-055716810int:SF3B1
InteractionDHX40 interactions

RBM15 SAFB BCLAF1 SLTM CHD1 PNISR THRAP3

2.06e-05249687int:DHX40
InteractionINO80B interactions

UIMC1 DDX46 LHX4 PRPF38B CHD1 SREK1

2.12e-05167686int:INO80B
InteractionDPF2 interactions

CEP170 CUL3 LHX4 LHX3 SSRP1 PNISR DEK MEOX2

2.23e-05349688int:DPF2
InteractionCUL7 interactions

CUL3 RIF1 RBM15 SAFB DDX46 PNN TCOF1 BCLAF1 CHD1 SSRP1 DEK THRAP3

2.28e-058456812int:CUL7
InteractionAR interactions

KMT2C ZNF609 DDX46 ATN1 ZNF608 PNN MYCBP2 PHF3 HECTD4 CHD8 SSRP1 MIDEAS THRAP3

2.32e-059926813int:AR
InteractionPARVG interactions

LHX3 POTEI MEOX1 MEOX2

2.43e-0550684int:PARVG
InteractionHDLBP interactions

CEP170 RIF1 RBM15 ABCF3 PNN TCOF1 RICTOR PRPF38B POTEJ SSRP1 THRAP3 USP47

2.57e-058556812int:HDLBP
InteractionDDX21 interactions

CUL3 SAFB RPL37 SRSF4 PNN BCLAF1 SLTM RICTOR SSRP1 DEK THRAP3

2.62e-057186811int:DDX21
InteractionPYHIN1 interactions

CUL3 SAFB SRSF4 TCOF1 PHF3 CHD1 SSRP1 PYHIN1

2.68e-05358688int:PYHIN1
InteractionPAXIP1 interactions

CUL3 UIMC1 KMT2C SRSF4 LHX4 BCLAF1 LHX3 THRAP3

2.73e-05359688int:PAXIP1
InteractionLGR4 interactions

SAFB TCOF1 MYCBP2 CPD POTEJ THRAP3 OTUD7B

2.86e-05262687int:LGR4
InteractionRBM4B interactions

CUL3 SAFB DDX46 TENT4B ATN1 GTF3C1 SLTM

2.86e-05262687int:RBM4B
InteractionUQCR11 interactions

DDX46 PHF3 SLTM PRPF38B

3.06e-0553684int:UQCR11
InteractionIFI6 interactions

DDX46 SLTM PRPF38B SREK1

3.30e-0554684int:IFI6
InteractionEN1 interactions

KMT2C RIF1 ZNF609 ZNF608 MIDEAS

3.51e-05110685int:EN1
InteractionSREK1 interactions

SAFB SRSF4 PNN SREK1 SSRP1 THRAP3

3.54e-05183686int:SREK1
InteractionSF3A2 interactions

CUL3 DDX46 SRSF4 PNN BCLAF1 THRAP3 PYHIN1

3.71e-05273687int:SF3A2
GeneFamilyRNA binding motif containing

RBM15 SAFB SRSF4 SLTM SREK1

1.02e-04213405725
GeneFamilyLIM class homeoboxes

LHX4 LHX3

3.11e-0412402522
GeneFamilyAnkyrin repeat domain containing|POTE ankyrin domain containing

POTEI POTEJ

3.67e-0413402685
GeneFamilyHOXL subclass homeoboxes

MEOX1 MEOX2

5.90e-0352402518
GeneFamilyAnkyrin repeat domain containing

ANK3 POTEI POTEJ

1.63e-02242403403
GeneFamilyPHD finger proteins

KMT2C PHF3

1.69e-029040288
CoexpressionHAMAI_APOPTOSIS_VIA_TRAIL_UP

CEP170 RIF1 STOX2 DDX46 PNN MYCBP2 PHF3 BCLAF1 PRPF38B CHD1 SREK1 PNISR DEK USP47

1.17e-096566814M18979
CoexpressionBUSSLINGER_GASTRIC_IMMUNE_CELLS

CUL3 KMT2C RIF1 ZNF609 RPL37 PNN MYCBP2 PHF3 BCLAF1 HECTD4 RICTOR PRPF38B CHD1 PNISR DEK THRAP3 USP47 PYHIN1

2.97e-0814926818M40023
CoexpressionNAKAYA_PBMC_FLUARIX_FLUVIRIN_AGE_18_50YO_CORRELATED_WITH_HAI_28DY_RESPONSE_AT_3DY_NEGATIVE

RPL37 TENT4B ANK3 PNN BCLAF1 RICTOR CHD1 PNISR USP47 GGTA1

3.27e-083636810M41103
CoexpressionACEVEDO_NORMAL_TISSUE_ADJACENT_TO_LIVER_TUMOR_UP

PNN MYCBP2 PHF3 WSB2 CHD1 PNISR

5.91e-06173686M2480
CoexpressionNAKAYA_PBMC_FLUMIST_AGE_18_50YO_3DY_DN

CUL3 RIF1 TENT4B PHF3 BCLAF1 RICTOR CHD1 SREK1 PNISR CWF19L1

9.69e-066806810M41089
CoexpressionKIM_ALL_DISORDERS_CALB1_CORR_UP

CEP170 PRUNE2 ABCF3 STXBP1 MYCBP2 HECTD4 ADGRB2 WSB2 RGS7

1.16e-05547689M2110
CoexpressionHOSHIDA_LIVER_CANCER_SUBCLASS_S2

PNN PHF3 BCLAF1 CPD DEK

1.25e-05115685M7995
CoexpressionPANGAS_TUMOR_SUPPRESSION_BY_SMAD1_AND_SMAD5_UP

PRUNE2 KMT2C STOX2 CPD PYHIN1

2.90e-05137685MM886
CoexpressionNAKAYA_PBMC_FLUARIX_FLUVIRIN_AGE_18_50YO_CORRELATED_WITH_HAI_28DY_RESPONSE_AT_7DY_NEGATIVE

RIF1 RPL37 TENT4B ANK3 PHF3 BCLAF1 RICTOR CHD1

3.08e-05474688M40991
CoexpressionFISCHER_DREAM_TARGETS

CUL3 RIF1 DDX46 PNN TCOF1 ATAD5 BCLAF1 SSRP1 DEK THRAP3 CWF19L1

3.71e-059696811M149
CoexpressionMARTORIATI_MDM4_TARGETS_FETAL_LIVER_DN

CUL3 UBAP2 BCLAF1 PRPF38B SREK1 PNISR THRAP3 CWF19L1

5.84e-05519688M3395
CoexpressionHADDAD_T_LYMPHOCYTE_AND_NK_PROGENITOR_UP

ANK3 PHF3 BCLAF1 ARMCX1

5.93e-0581684M17082
CoexpressionLAZARO_GENETIC_MOUSE_MODEL_HIGH_GRADE_SMALL_CELL_NEUROENDOCRINE_LUNG_CARCINOMA_UP

RIF1 RBM15 UBAP2 STXBP1 ATAD5 ADGRB2 SSRP1 RIMS2 SAMD14

6.35e-05680689MM456
CoexpressionERWIN_COHEN_BLOOD_LIVE_VACCINE_TC_83_AGE_23_48YO_VACCINATED_VS_CONTROL_14DY_UP

RBM15 TENT4B ANK3 PNN BCLAF1 SREK1 PNISR DEK USP47

6.87e-05687689M41022
CoexpressionMARTORIATI_MDM4_TARGETS_FETAL_LIVER_DN

CUL3 UBAP2 BCLAF1 PRPF38B SREK1 PNISR THRAP3 CWF19L1

8.00e-05543688MM997
CoexpressionSENGUPTA_NASOPHARYNGEAL_CARCINOMA_WITH_LMP1_UP

RIF1 BCLAF1 SREK1 SIM1 RIMS2 THRAP3 MEOX2

8.47e-05404687M19488
CoexpressionNAKAYA_PBMC_FLUARIX_FLUVIRIN_AGE_18_50YO_3DY_DN

ZNF609 PNN PHF3 BCLAF1 RICTOR SREK1 PNISR

1.28e-04432687M41149
CoexpressionGENTILE_UV_RESPONSE_CLUSTER_D2

PNN PHF3 CHD1

1.32e-0438683M12861
CoexpressionPGF_UP.V1_UP

RIF1 PHF3 BCLAF1 CPD SREK1

1.37e-04190685M2674
CoexpressionGSE29617_CTRL_VS_TIV_FLU_VACCINE_PBMC_2008_UP

SRSF4 PHF3 BCLAF1 RICTOR SREK1

1.40e-04191685M4926
CoexpressionGSE5589_WT_VS_IL10_KO_LPS_AND_IL6_STIM_MACROPHAGE_45MIN_UP

RPL37 TPH2 ARMCX1 THRAP3 PLCE1

1.70e-04199685M6651
CoexpressionGSE11961_GERMINAL_CENTER_BCELL_DAY7_VS_PLASMA_CELL_DAY7_UP

RBM15 ATN1 TCOF1 MYCBP2 SIM1

1.74e-04200685M9360
CoexpressionGSE43955_TH0_VS_TGFB_IL6_TH17_ACT_CD4_TCELL_42H_DN

ABCF3 ANK3 PNN SLTM SIM1

1.74e-04200685M9632
CoexpressionGSE28237_FOLLICULAR_VS_EARLY_GC_BCELL_UP

SAFB ABCF3 MYCBP2 VPS8 RFTN2

1.74e-04200685M4884
CoexpressionCHEN_HOXA5_TARGETS_9HR_UP

UIMC1 RBM15 SLTM PRPF38B SREK1

2.87e-04223685M17621
CoexpressionAtlasFacebaseRNAseq_e10.5_Neural Epithelium Overlying Lateral Eminence_top-relative-expression-ranked_2500_k-means-cluster#5

CUL3 RIF1 SAFB DDX46 PNN ATAD5 BCLAF1 HECTD4 SLTM PRPF38B CHD8 CHD1 RIMS2 DEK

1.60e-086546814Facebase_RNAseq_e10.5_Neural Epithelium Overlying Lateral Eminence_2500_K5
CoexpressionAtlasFacebaseRNAseq_e10.5_Neural Epithelium Overlying Lateral Eminence_top-relative-expression-ranked_500_k-means-cluster#5

RIF1 DDX46 PNN ATAD5 BCLAF1 SLTM CHD1 RIMS2 DEK

5.35e-08232689Facebase_RNAseq_e10.5_Neural Epithelium Overlying Lateral Eminence_500_K5
CoexpressionAtlasFacebaseRNAseq_e10.5_Neural Epithelium Flanking Eminence_top-relative-expression-ranked_500_k-means-cluster#3

RIF1 SAFB DDX46 PNN ATAD5 SLTM PRPF38B DEK

1.80e-07192688Facebase_RNAseq_e10.5_Neural Epithelium Flanking Eminence_500_K3
CoexpressionAtlasFacebaseRNAseq_e10.5_Neural Epithelium Overlying Lateral Eminence_top-relative-expression-ranked_1000

CUL3 RIF1 STOX2 SAFB DDX46 PNN ATAD5 BCLAF1 ADGRB2 SLTM PRPF38B CHD8 CHD1 RIMS2 DEK

3.83e-079836815Facebase_RNAseq_e10.5_Neural Epithelium Overlying Lateral Eminence_1000
CoexpressionAtlasFacebaseRNAseq_e10.5_Neural Epithelium Overlying Central Eminence_top-relative-expression-ranked_1000_k-means-cluster#4

STOX2 DDX46 PNN ATAD5 BCLAF1 CHD8 CHD1 RIMS2 DEK

4.47e-07298689Facebase_RNAseq_e10.5_Neural Epithelium Overlying Central Eminence_1000_K4
CoexpressionAtlasFacebaseRNAseq_e10.5_Neural Epithelium Flanking Eminence_top-relative-expression-ranked_500

RIF1 STOX2 SAFB DDX46 PNN ATAD5 SLTM PRPF38B SIM1 RIMS2 DEK

4.85e-074986811Facebase_RNAseq_e10.5_Neural Epithelium Flanking Eminence_500
CoexpressionAtlasFacebaseRNAseq_e10.5_Neural Epithelium Flanking Eminence_top-relative-expression-ranked_1000_k-means-cluster#2

RIF1 SAFB DDX46 PNN ATAD5 SLTM PRPF38B PNISR DEK

6.38e-07311689Facebase_RNAseq_e10.5_Neural Epithelium Flanking Eminence_1000_K2
CoexpressionAtlasFacebaseRNAseq_e8.5_Hind Brain Neural Epithelium_top-relative-expression-ranked_2500_k-means-cluster#3

CUL3 RIF1 SAFB DDX46 PNN ATAD5 PHF3 BCLAF1 SLTM CHD1 THRAP3

9.28e-075326811Facebase_RNAseq_e8.5_Hind Brain Neural Epithelium_2500_K3
CoexpressionAtlasfacebase_RNAseq_e10.5_Emin_LatNas_2500_K3

CUL3 RIF1 DDX46 TENT4B PNN TCOF1 ATAD5 PHF3 BCLAF1 SLTM PRPF38B CHD1 SREK1 PNISR DEK THRAP3

1.63e-0612576816facebase_RNAseq_e10.5_Emin_LatNas_2500_K3
CoexpressionAtlasFacebaseRNAseq_e8.5_Floor Plate_top-relative-expression-ranked_2500_k-means-cluster#1

RIF1 DDX46 PNN ATAD5 BCLAF1 SLTM PRPF38B CHD1 PNISR DEK

2.32e-064696810Facebase_RNAseq_e8.5_Floor Plate_2500_K1
CoexpressionAtlasfacebase_RNAseq_e10.5_Emin_LatNas_2500

CUL3 RIF1 DDX46 TENT4B PNN TCOF1 ATAD5 PHF3 BCLAF1 SLTM PRPF38B CHD1 SREK1 SIM1 PNISR DEK THRAP3

2.41e-0614596817facebase_RNAseq_e10.5_Emin_LatNas_2500
CoexpressionAtlasFacebaseRNAseq_e10.5_Neural Epithelium Flanking Eminence_top-relative-expression-ranked_1000

RIF1 STOX2 SAFB DDX46 PNN TCOF1 ATAD5 SLTM PRPF38B CHD1 SIM1 RIMS2 PNISR DEK

2.42e-069896814Facebase_RNAseq_e10.5_Neural Epithelium Flanking Eminence_1000
CoexpressionAtlasFacebaseRNAseq_e10.5_Neural Epithelium Overlying Lateral Eminence_top-relative-expression-ranked_500

RIF1 DDX46 PNN ATAD5 BCLAF1 SLTM PRPF38B CHD1 RIMS2 DEK

3.62e-064936810Facebase_RNAseq_e10.5_Neural Epithelium Overlying Lateral Eminence_500
CoexpressionAtlasFacebaseRNAseq_e10.5_Maxillary Arch_top-relative-expression-ranked_2500_k-means-cluster#5

CEP170 RIF1 DDX46 STXBP1 GTF3C1 PNN ATAD5 SLTM PRPF38B PNISR DEK

4.67e-066296811Facebase_RNAseq_e10.5_Maxillary Arch_2500_K5
CoexpressionAtlasFacebaseRNAseq_e10.5_Neural Epithelium Overlying Central Eminence_top-relative-expression-ranked_1000

STOX2 ZNF609 DDX46 PNN ATAD5 BCLAF1 PRPF38B CHD8 CHD1 SIM1 RIMS2 DEK MEOX2

1.26e-059866813Facebase_RNAseq_e10.5_Neural Epithelium Overlying Central Eminence_1000
CoexpressionAtlasFacebaseRNAseq_e10.5_Neural Epithelium Overlying Central Eminence_top-relative-expression-ranked_2500_k-means-cluster#3

STOX2 ZNF609 DDX46 PNN ATAD5 BCLAF1 WSB2 CHD8 SIM1 RIMS2 SAMD14 DEK

2.36e-058936812Facebase_RNAseq_e10.5_Neural Epithelium Overlying Central Eminence_2500_K3
CoexpressionAtlasfacebase_RNAseq_e10.5_Emin_MedNas_2500_K1

RIF1 STOX2 DDX46 PNN ATAD5 BCLAF1 ADGRB2 SLTM PRPF38B CHD1 SAMD14 DEK THRAP3

2.69e-0510606813facebase_RNAseq_e10.5_Emin_MedNas_2500_K1
CoexpressionAtlasFacebaseRNAseq_e10.5_Mandibular Arch_top-relative-expression-ranked_500_k-means-cluster#5

CUL3 DDX46 PNN BCLAF1 SLTM PRPF38B

2.91e-05186686Facebase_RNAseq_e10.5_Mandibular Arch_500_K5
CoexpressionAtlasFacebaseRNAseq_e10.5_Neural Epithelium Flanking Eminence_top-relative-expression-ranked_2500_k-means-cluster#5

RIF1 SAFB DDX46 ATN1 PNN ATAD5 SLTM CHD1 CPD PNISR DEK

6.16e-058316811Facebase_RNAseq_e10.5_Neural Epithelium Flanking Eminence_2500_K5
CoexpressionAtlasFacebaseRNAseq_e10.5_Neural Epithelium Overlying Lateral Eminence_top-relative-expression-ranked_1000_k-means-cluster#2

CUL3 SAFB ATAD5 CHD8 CHD1 RIMS2 DEK

8.51e-05328687Facebase_RNAseq_e10.5_Neural Epithelium Overlying Lateral Eminence_1000_K2
CoexpressionAtlasfacebase_RNAseq_e8.5_FloorPlate_2500_K3

RIF1 STOX2 DDX46 UBAP2 ZNF608 PNN TCOF1 ATAD5 BCLAF1 VPS8 SLTM PRPF38B CHD1 DEK

9.36e-0513716814facebase_RNAseq_e8.5_FloorPlate_2500_K3
CoexpressionAtlasDevelopingKidney_e15.5_Cap mesenchyme_emap-27738_k-means-cluster#5_top-relative-expression-ranked_1000

RIF1 ANK3 PNN CPD PNISR

1.06e-04146685gudmap_developingKidney_e15.5_Cap mesenchyme_1000_k5
CoexpressionAtlasFacebaseRNAseq_e10.5_Neural Epithelium Overlying Medial Eminence_top-relative-expression-ranked_2500_k-means-cluster#4

CEP170 STXBP1 SRSF4 GTF3C1 PRPF38B SSRP1 RIMS2 PNISR DEK

1.13e-04595689Facebase_RNAseq_e10.5_Neural Epithelium Overlying Medial Eminence_2500_K4
CoexpressionAtlasfacebase_RNAseq_e10.5_Emin_MedNas_2500

RIF1 STOX2 DDX46 PNN ATAD5 BCLAF1 ADGRB2 SLTM PRPF38B CHD1 SIM1 SAMD14 DEK THRAP3

1.30e-0414146814facebase_RNAseq_e10.5_Emin_MedNas_2500
CoexpressionAtlasFacebaseRNAseq_e10.5_Neural Epithelium Overlying Lateral Eminence_top-relative-expression-ranked_1000_k-means-cluster#3

RIF1 DDX46 PNN BCLAF1 SLTM PRPF38B

1.37e-04246686Facebase_RNAseq_e10.5_Neural Epithelium Overlying Lateral Eminence_1000_K3
CoexpressionAtlasfacebase_RNAseq_e10.5_MaxArch_2500_K3

CUL3 RIF1 DDX46 PNN TCOF1 ATAD5 BCLAF1 SLTM PRPF38B CHD1 SREK1 DEK THRAP3

1.47e-0412526813facebase_RNAseq_e10.5_MaxArch_2500_K3
CoexpressionAtlasDevelopingKidney_e15.5_Cap mesenchyme_emap-27738_top-relative-expression-ranked_1000

RIF1 ANK3 PNN RICTOR CPD SREK1 RIMS2 PNISR MEOX1 MEOX2

1.77e-047796810gudmap_developingKidney_e15.5_Cap mesenchyme_1000
CoexpressionAtlasDevelopingKidney_e15.5_cortic collect duct_emap-28132_k-means-cluster#4_top-relative-expression-ranked_1000

ANK3 PNN MYCBP2 PHF3 CHD1 CPD PNISR

1.95e-04375687gudmap_developingKidney_e15.5_cortic collect duct_1000_k4
CoexpressionAtlasFacebaseRNAseq_e10.5_Mandibular Arch_top-relative-expression-ranked_1000_k-means-cluster#3

CUL3 DDX46 PNN BCLAF1 SLTM PRPF38B

2.31e-04271686Facebase_RNAseq_e10.5_Mandibular Arch_1000_K3
CoexpressionAtlasDevelopingGonad_e12.5_testes_emap-29069_top-relative-expression-ranked_1000

RIF1 STOX2 RPL37 TCOF1 BCLAF1 ADGRB2 CHD8 CPD SREK1 THRAP3

2.64e-048196810gudmap_developingGonad_e12.5_testes_1000
CoexpressionAtlasDevelopingGonad_e12.5_testes_emap-29069_top-relative-expression-ranked_500

RIF1 STOX2 RPL37 BCLAF1 CHD8 CPD SREK1

3.15e-04406687gudmap_developingGonad_e12.5_testes_500
CoexpressionAtlasfacebase_RNAseq_e10.5_NeuroEpith_central_2500_K4

STOX2 ZNF609 PNN ATAD5 PHF3 BCLAF1 SLTM PRPF38B CHD1 SIM1 DEK THRAP3 PLCE1

3.55e-0413706813facebase_RNAseq_e10.5_NeuroEpith_central_2500_K4
CoexpressionAtlasFacebaseRNAseq_e9.5_Mandibular Arch_top-relative-expression-ranked_2500_k-means-cluster#2

CEP170 STXBP1 GTF3C1 MYCBP2 ATAD5 PRPF38B PNISR DEK

4.29e-04564688Facebase_RNAseq_e9.5_Mandibular Arch_2500_K2
CoexpressionAtlasFacebaseRNAseq_e9.5_Mandibular Arch_top-relative-expression-ranked_1000_k-means-cluster#4

STXBP1 GTF3C1 ATAD5 PRPF38B SIM1

4.86e-04203685Facebase_RNAseq_e9.5_Mandibular Arch_1000_K4
CoexpressionAtlasDevelopingGonad_e12.5_epididymis_emap-29139_k-means-cluster#3_top-relative-expression-ranked_500

RIF1 STOX2 BCLAF1 CPD

4.92e-04114684gudmap_developingGonad_e12.5_epididymis_k3_500
CoexpressionAtlasfacebase_RNAseq_e10.5_MandArch_2500_K1

CUL3 RIF1 DDX46 ANK3 PNN ATAD5 BCLAF1 SLTM PRPF38B SREK1 DEK THRAP3

5.22e-0412416812facebase_RNAseq_e10.5_MandArch_2500_K1
CoexpressionAtlasfacebase_RNAseq_e10.5_MandArch_2500

CUL3 RIF1 DDX46 ANK3 PNN ATAD5 BCLAF1 SLTM PRPF38B SREK1 SIM1 DEK THRAP3

6.85e-0414686813facebase_RNAseq_e10.5_MandArch_2500
CoexpressionAtlasDevelopingLowerUrinaryTract_e14.5_ Genital tubercle_emap-6706_top-relative-expression-ranked_1000

CEP170 RIF1 PHF3 CHD1 CPD RFTN2 SIM1 RIMS2 MEOX2

7.44e-04769689gudmap_developingLowerUrinaryTract_e14.5_ Genital tubercle_1000
CoexpressionAtlasDevelopingKidney_e15.5_ureter tip_flank cortic collct_emap-27752_k-means-cluster#5_top-relative-expression-ranked_1000

RIF1 DDX46 ANK3 CHD1 CPD SIM1

7.54e-04339686gudmap_developingKidney_e15.5_ureter tip_flank cortic collct_1000_k5
CoexpressionAtlasDevelopingGonad_P2_epididymis_emap-30199_k-means-cluster#1_top-relative-expression-ranked_1000

RIF1 BCLAF1 CPD THRAP3

9.55e-04136684gudmap_developingGonad_P2_epididymis_1000_k1
CoexpressionAtlasDevelopingGonad_e12.5_testes_emap-29069_k-means-cluster#4_top-relative-expression-ranked_500

RIF1 STOX2 RPL37 BCLAF1 SREK1

1.05e-03241685gudmap_developingGonad_e12.5_testes_k4_500
CoexpressionAtlasDevelopingLowerUrinaryTract_e14.5_ Genital tubercle_emap-6706_k-means-cluster#2_top-relative-expression-ranked_1000

CEP170 RIF1 CHD1 RFTN2 SIM1 RIMS2

1.30e-03377686gudmap_developingLowerUrinaryTract_e14.5_ Genital tubercle_1000_k2
CoexpressionAtlasDevelopingKidney_e15.5_anlage of loop of Henle_emap-31283_k-means-cluster#3_top-relative-expression-ranked_1000

ANK3 MYCBP2 PHF3 CHD1 CPD SIM1

1.34e-03379686gudmap_developingKidney_e15.5_1000_k3
CoexpressionAtlasDevelopingGonad_e12.5_ovary_emap-28876_k-means-cluster#4_top-relative-expression-ranked_1000

RIF1 BCLAF1 CPD THRAP3

1.37e-03150684gudmap_developingGonad_e12.5_ovary_k4_1000
CoexpressionAtlasDevelopingGonad_e12.5_testes_emap-29069_k-means-cluster#1_top-relative-expression-ranked_1000

RIF1 STOX2 RPL37 TCOF1 BCLAF1 ADGRB2 SREK1

1.41e-03524687gudmap_developingGonad_e12.5_testes_k1_1000
CoexpressionAtlasDevelopingGonad_e11.5_testes_emap-3226_top-relative-expression-ranked_1000

RIF1 STOX2 RPL37 GTF3C1 TCOF1 BCLAF1 CHD8 CPD SREK1

1.42e-03843689gudmap_developingGonad_e11.5_testes_1000
CoexpressionAtlasDevelopingGonad_e11.5_testes and mesonephros_emap-3226_top-relative-expression-ranked_1000

RIF1 STOX2 RPL37 PNN TCOF1 BCLAF1 CHD8 CPD SREK1

1.43e-03844689gudmap_developingGonad_e11.5_testes and mesonephros_1000
CoexpressionAtlasDevelopingLowerUrinaryTract_e14.5_ urogenital sinus_emap-5517_k-means-cluster#4_top-relative-expression-ranked_1000

STOX2 ANK3 MYCBP2 PHF3 CHD1 CPD

1.45e-03385686gudmap_developingLowerUrinaryTract_e14.5_ urogenital sinus_1000_k4
CoexpressionAtlasDevelopingGonad_e12.5_epididymis_emap-29139_k-means-cluster#1_top-relative-expression-ranked_1000

RIF1 STOX2 BCLAF1 CPD THRAP3

1.50e-03261685gudmap_developingGonad_e12.5_epididymis_k1_1000
CoexpressionAtlasDevelopingGonad_P2_epididymis_emap-30199_k-means-cluster#4_top-relative-expression-ranked_100

CHD8 PNISR

1.67e-0319682gudmap_developingGonad_P2_epididymis_100_k4
CoexpressionAtlasDevelopingGonad_e12.5_epididymis_emap-29139_top-relative-expression-ranked_200

RIF1 CHD8 CPD PNISR

1.70e-03159684gudmap_developingGonad_e12.5_epididymis_200
ToppCellCOVID-19_Mild|World / Disease group, lineage and cell class

KMT2C PNN PHF3 BCLAF1 RICTOR CHD1 SREK1 PNISR

6.92e-101976885c33454b10023decd2f5ccda9229b6512659711e
ToppCellmild|World / Cohort 1 (10x PBMC) with disease condition, cell group and cell class

KMT2C PNN MYCBP2 PHF3 BCLAF1 CHD1 SREK1 PNISR

7.79e-1020068812f1685ce8f218433068e090c9d839cd5a1910bf
ToppCelldroplet-Marrow-nan-3m|Marrow / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation

ZNF608 MYCBP2 PHF3 BCLAF1 CHD1 THRAP3 PYHIN1

1.34e-081846871154a5ad7b8512272b7476f949ddac350910bfb7
ToppCellCOVID-19_Mild-Classical_Monocyte-cMono_4|Classical_Monocyte / Disease condition and Cell class

RPL37 SRSF4 TCOF1 BCLAF1 RICTOR CHD1 SREK1

2.14e-08197687e666f6580e9a20b5e550f02125706db17eec8510
ToppCellH1299-infected-SARSCoV2|infected / Cell line, Condition and Strain

DDX46 PNN SLTM PRPF38B SREK1 RIMS2 PNISR

2.14e-081976870fa3e4cf93e77d78b1f97b906c5b13ca741ae17e
ToppCellPBMC-Mild|PBMC / Location, Disease Group, Cell group, Cell class (2021.03.09)

KMT2C PNN PHF3 BCLAF1 RICTOR CHD1 SREK1

2.22e-0819868744417089b62056269cac38d3134ff209c05b7007
ToppCellPBMC-Mild|PBMC / Location, Disease Group, Cell group, Cell class and sub_cluster (2021.03.01)

KMT2C PNN PHF3 BCLAF1 RICTOR CHD1 SREK1

2.22e-0819868728ef3fc4c17dcb765537b75917f7db78baa522db
ToppCellmild-low-quality_cells|World / Cohort 1 (10x PBMC) with disease condition, cell group and cell class

ANK3 PNN PHF3 RICTOR SREK1 PNISR PYHIN1

2.30e-08199687f0b0097df0026496470a80d8cc9375ffd8389b00
ToppCellCOVID-19|World / Disease, condition lineage and cell class

KMT2C PNN MYCBP2 PHF3 BCLAF1 CHD1 SREK1

2.38e-082006877dec470c379cd89f05a0f37c8628b21f136e52f0
ToppCellH1299-infected|H1299 / Cell line, Condition and Strain

PNN TCOF1 SLTM PRPF38B SREK1 PNISR

4.91e-071926869cf8049bdc3e0f81ce69042beac72b08d8f38b4e
ToppCellsevere-low-quality_cells|World / Cohort 1 (10x PBMC) with disease condition, cell group and cell class

KMT2C ANK3 PNN GARIN1B SREK1 PNISR

5.70e-0719768657ebd552f10d6278623b52a3d484d4b91ae1d028
ToppCell(11)_FOXN4+-(2)_GFP_FOXI1|(11)_FOXN4+ / shred by cell type by condition

CEP170 MYCBP2 BCLAF1 SLTM PRPF38B CHD1

5.87e-0719868676d40b8c2f8399725b3a62ee2ae0896559cf91eb
ToppCellcontrol-Epithelial-Secretory|Epithelial / Severity, Lineage and Cell class of Nasopharyngeal (NS) Samples from Patients and Controls

RIF1 PNN MYCBP2 PRPF38B CPD PNISR

6.05e-071996863d01f90ffd271ca00129192787e4921bdca7e01e
ToppCellPBMC_fresh-frozen-Severe-critical_progression_d12-22_with-steroid-Lymphocytic-Lymphocytic_T-mature_alpha-beta_T_cell-T_CD4_c03-ITGA4|Severe-critical_progression_d12-22_with-steroid / Compartment, severity and other cell annotations on 10x 3' data (130k)

ZNF609 ANK3 PHF3 SREK1 OTUD7B

5.73e-06167685ced6ed9b412739c6ced622523347c10295edbf53
ToppCellC_00|World / shred on cell type and cluster

RPL37 DDX46 PNN ATAD5 PNISR

8.02e-06179685da2dadc3266ffebd4a34ac61bfa05fddcadcde4c
ToppCellfacs-Brain_Non-Myeloid-Cerebellum-3m-Neuronal-nan|Brain_Non-Myeloid / Brain_Non-Myeloid_Brain_Myeloid - method, tissue, subtissue, age, lineage, cell ontology and free annotation

PRUNE2 ZNF609 RPL37 STXBP1 RIMS2

8.24e-06180685f6a2208960d0df1500c974cc44c3c054cd7475a9
ToppCelldroplet-Spleen-nan-18m|Spleen / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation

RPL37 ZNF608 MYCBP2 CHD1 PYHIN1

8.69e-06182685eeb5dfa4539e9ca5220f26bc2b65717ddcf13b6c
ToppCelldroplet-Spleen-nan-18m-Lymphocytic|Spleen / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation

RPL37 ZNF608 MYCBP2 CHD1 PYHIN1

8.93e-0618368528cbf909424f3be4491d49832f0aca0386560814
ToppCelldroplet-Kidney-nan-21m-Mesenchymal-podocyte|Kidney / Skin_Bladder_Kidney_Mammary_Gland - method, tissue, subtissue, age, lineage, cell ontology and free annotation

PRUNE2 SAMD14 SERF1A ARMCX1 PLCE1

8.93e-06183685ad7421623e4c0c5ba02eec56e9bdae43ebb88d90
ToppCelldroplet-Spleen-nan-18m-Lymphocytic-nan|Spleen / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation

RPL37 ZNF608 MYCBP2 CHD1 PYHIN1

8.93e-061836853fa608aa6b119869ec3280dc388dfee57160e63a
ToppCelldroplet-Marrow-nan-3m-Myeloid|Marrow / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation

ZNF608 TCOF1 MYCBP2 CHD1 PYHIN1

9.41e-061856857adfa929930cfa795cbfbd9f1a0b439e08aa765d
ToppCellrenal_cortex_nuclei-CKD+DKD_normotensive-Epithelial-Proximal_tubule_epithelial_cell-kidney_proximal_tubule_epithelial_cell-Adaptive_/_Maladaptive_/_Repairing_Proximal_Tubule_Epithelial_Cell|CKD+DKD_normotensive / Celltypes from Cells and Nuclei per compartment and clinical group

PRUNE2 STOX2 ANK3 ZNF608 KCTD16

9.66e-06186685b87acc80b7baa41681e4ed11d5537b9fbf5832f5
ToppCellPCW_10-12-Epithelial-Epithelial_neuroendo-epi_neuroendocrine1[NE1]_(11)|PCW_10-12 / Celltypes from embryonic and fetal-stage human lung

PRUNE2 POTEI POTEJ RIMS2 RGS7

9.91e-0618768598477ba04a42a8da80a72f41a182429f46283595
ToppCell10x5'-GI_small-bowel-Lymphocytic_T_CD4-T_CD4/CD8|GI_small-bowel / Manually curated celltypes from each tissue

KMT2C BCLAF1 RICTOR CHD1 SREK1

1.02e-05188685ab9b725d6e0cdab8e9ddda6dee09e14730e9a578
ToppCelldroplet-Lung-LUNG-1m-Mesenchymal-bronchial_smooth_muscle_cell|Lung / Lung_Trachea - method, tissue, subtissue, age, lineage, cell ontology and free annotation

PRUNE2 KCTD16 ADGRB2 LMOD1 PLCE1

1.04e-051896854dc32b463546bbe7250dddd281b92ad17ec22da1
ToppCelldroplet-Lung-LUNG-1m-Mesenchymal-Airway_Smooth_Muscle|Lung / Lung_Trachea - method, tissue, subtissue, age, lineage, cell ontology and free annotation

PRUNE2 KCTD16 ADGRB2 LMOD1 PLCE1

1.04e-051896850d06bf0d7191d13a1c4f30a7881e7ea1093bfd6f
ToppCellPCW_13-14-Epithelial-Epithelial_neuroendo|PCW_13-14 / Celltypes from embryonic and fetal-stage human lung

PRUNE2 POTEI POTEJ RIMS2 RGS7

1.15e-051936858603d1a38955ad2529d04e4704467c73ea5bfbda
ToppCellmegakaryocytic-CD34+_Megakaryoblast|megakaryocytic / Lineage and Cell class

DDX46 PNN MYCBP2 BCLAF1 PNISR

1.34e-0519968599a65887d3c8a2cde26693dd74404b101bba9d58
ToppCellNeuronal|World / cells hierarchy compared to all cells using T-Statistic

STXBP1 ANK3 MYCBP2 RIMS2 RGS7

1.37e-0520068548d801219bc771d6c7e151dc88ca4c179988de85
ToppCellCOVID-19-COVID-19_Mild|COVID-19 / Disease, condition lineage and cell class

PNN BCLAF1 RICTOR CHD1 PNISR

1.37e-0520068562c25042086f1afd1102e0720e933c2e476468fd
ToppCellGlobus_pallidus-Macroglia-POLYDENDROCYTE-P3-Tnr-Polydendrocyte.Tnr.Cyth3_(Cyth3)-|Globus_pallidus / BrainAtlas - Mouse McCarroll V32

SRSF4 PNN PHF3 THRAP3

8.84e-05153684553dff9688a1996d8f4ba16e60c683593d781389
ToppCellGlobus_pallidus-Macroglia-POLYDENDROCYTE-P3-Tnr-Polydendrocyte.Tnr.Cyth3_(Cyth3)|Globus_pallidus / BrainAtlas - Mouse McCarroll V32

SRSF4 PNN PHF3 THRAP3

8.84e-0515368488ca2d2c2ab19fbee13e18951b993ee05dd30f67
ToppCell5'-GW_trimst-2-SmallIntestine-Epithelial-neuro-epithelial-EC_cells_(NPW+)|GW_trimst-2 / Celltypes from developing, pediatric, Crohn's, & adult GI tract

POTEI POTEJ SIM1 RIMS2

9.30e-05155684498e52e2364ff44d3c0c707ba22468217031f5bd
ToppCell10x5'-bone_marrow-Lymphocytic_T_CD4-T_CD4/CD8|bone_marrow / Manually curated celltypes from each tissue

KMT2C ANK3 RICTOR CHD1

9.53e-051566841545169694f686d28648a68b552c2ae606599d66
ToppCellRV-13._Vascular_Smooth_Muscle|RV / Chamber and Cluster_Paper

PRUNE2 LMOD1 PLCE1 MEOX2

1.08e-0416168447b3b7662cbb671ccc086dc0a0cabd65f63eb5a1
ToppCellTCGA-Brain-Primary_Tumor-Low_Grade_Glioma-Astrocytoma|TCGA-Brain / Sample_Type by Project: Shred V9

RBM15 SRSF4 PRPF38B THRAP3

1.10e-04162684810881210e015c788814e4fe8d7a24c929cf2621
ToppCellHippocampus-Neuronal-Excitatory-eN2(Slc17a7_Slc17a6)-Slc17a6-Excitatory_Neuron.Slc17a6.Nefm_(Neuron.Slc17a6.Nefm)-|Hippocampus / BrainAtlas - Mouse McCarroll V32

TSGA13 LHX3 SIM1

1.12e-046168302684156c41a06b4113117f43d11979db364ff03
ToppCellHippocampus-Neuronal-Excitatory-eN2(Slc17a7_Slc17a6)-Slc17a6-Excitatory_Neuron.Slc17a6.Nefm_(Neuron.Slc17a6.Nefm)|Hippocampus / BrainAtlas - Mouse McCarroll V32

TSGA13 LHX3 SIM1

1.12e-04616836d7f00757654adf2f51905a3b12772e64aa3773a
ToppCellChildren_(3_yrs)-Epithelial-lung_neuroendocrine_cell_(PNEC)-D046|Children_(3_yrs) / Lineage, Cell type, age group and donor

POTEI POTEJ RIMS2 RGS7

1.16e-04164684be49af6335f2505065cde2cb9800e4a5516811b1
ToppCell368C-Myeloid-Macrophage-FABP4+_Macrophage_2|Macrophage / Donor, Lineage, Cell class and subclass (all cells)

ANK3 LMOD1 SAMD14 PLCE1

1.18e-041656843d2acdae0dd2b79a15f74158e8e566ce22b4218e
ToppCellCOVID-19-kidney-PEC|COVID-19 / Disease (COVID-19 only), tissue and cell type

PRUNE2 STOX2 KCTD16 PLCE1

1.27e-04168684a086c306be430adf0632ba53e98cd8014d2de330
ToppCellChildren_(3_yrs)-Epithelial-lung_neuroendocrine_cell_(PNEC)|Children_(3_yrs) / Lineage, Cell type, age group and donor

POTEI POTEJ RIMS2 RGS7

1.30e-04169684b6b5bb6408c1305a00719e1b88a5e1202081faf3
ToppCell368C-Myeloid-Macrophage-FABP4+_Macrophage_2|Myeloid / Donor, Lineage, Cell class and subclass (all cells)

ANK3 LMOD1 SAMD14 PLCE1

1.36e-04171684e59afa0a773dca3b9c208d17510ea55703b42598
ToppCellLV-13._Vascular_Smooth_Muscle|LV / Chamber and Cluster_Paper

PRUNE2 LMOD1 PLCE1 MEOX2

1.36e-04171684e99ecae66530d1ae09330cee408c8f3950b87e67
ToppCell10x_3'_v2v3-Non-neoplastic-Vascular-Mural_cell-VLMC-B|10x_3'_v2v3 / Platform, Oncotype, Lineage, Cell_class, celltype (level4), mutation group

PRUNE2 LMOD1 GARIN1B ARMCX1

1.62e-04179684381ac15d59f31bc613828bdcfbc9192b106b4d18
ToppCellwk_20-22-Epithelial-Proximal_epithelial-GHRL+_neuroendocrine|wk_20-22 / Celltypes from embryonic and fetal-stage human lung

POTEI POTEJ RIMS2 RGS7

1.62e-0417968406f92c884189197c86793191c05f65e34925c097
ToppCellEpithelial-lung_neuroendocrine_cell_(PNEC)|World / Lineage, Cell type, age group and donor

POTEI POTEJ RIMS2 RGS7

1.72e-0418268457bf4ffb304324e2e392e196336a530d9f78fe0d
ToppCelldroplet-Marrow-nan-3m-Myeloid-nan|Marrow / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation

ZNF608 MYCBP2 CHD1 PYHIN1

1.72e-04182684f8c73baaaca145e2efc48f10f636feb79c8fc779
ToppCellCOVID-19-kidney-PCT-S1|COVID-19 / Disease (COVID-19 only), tissue and cell type

PRUNE2 STOX2 KCTD16 RIMS2

1.76e-041836846878d14026c3df6aa12e45dfad94b32fa9d9b0b7
ToppCellFetal_29-31_weeks-Epithelial-lung_neuroendocrine_cell_(PNEC)|Fetal_29-31_weeks / Lineage, Cell type, age group and donor

PRUNE2 POTEI RIMS2 RGS7

1.87e-04186684b45cce768e4bf91da194fd9660cab7520dfb15ac
ToppCelldroplet-Bladder-nan|Bladder / Skin_Bladder_Kidney_Mammary_Gland - method, tissue, subtissue, age, lineage, cell ontology and free annotation

RPL37 MYCBP2 SLTM CHD1

1.91e-04187684663991a8afe652e92363b64bcbd68c14d0307f0e
ToppCellILEUM-inflamed-(3)_MNP-(3)_moDC|(3)_MNP / shred on tissue, inflammation_status, cell class(v3), cell subclass (v2)

RICTOR CHD1 SREK1 PNISR

1.91e-041876840099def970fbc828756fbf853eca2ce77b8cd342
ToppCelldroplet-Lung-LUNG-1m-Endothelial-endothelial_cell_of_lymphatic_vessel|Lung / Lung_Trachea - method, tissue, subtissue, age, lineage, cell ontology and free annotation

STXBP1 SAMD14 PLCE1 MEOX1

1.91e-041876849c9ae8725905ba0cfe407878006ed06c2480fb72
ToppCellrenal_papilla_nuclei-Hypertensive_with+without-CKD-Epithelial-Intermediate_tubule_epithelial_cell-kidney_loop_of_Henle_thin_descending_limb_epithelial_cell-Degenerative_Descending_Thin_Limb_Cell_Type_3|Hypertensive_with+without-CKD / Celltypes from Cells and Nuclei per compartment and clinical group

PRUNE2 STOX2 CPD RIMS2

1.91e-04187684c31130fc2f9f882944b2ba366a034a03f051c4b9
ToppCelldroplet-Lung-LUNG-1m-Endothelial-Lymphatic_endothelial_cell|Lung / Lung_Trachea - method, tissue, subtissue, age, lineage, cell ontology and free annotation

STXBP1 SAMD14 PLCE1 MEOX1

1.91e-041876849e9460e57cdc9cd0a0de2866b140e06d0bc19a8f
ToppCelldroplet-Tongue-nan|Tongue / Tongue_Heart_Limb_Muscle_Aorta_Diaphragm - method, tissue, subtissue, age, lineage, cell ontology and free annotation

RPL37 SLTM PRPF38B CHD1

1.95e-04188684d62cc37e86b7b186e53aeb7f421c4e5ee28f23bd
ToppCellrenal_papilla_nuclei-Hypertensive_with+without-CKD-Epithelial-Intermediate_tubule_epithelial_cell|Hypertensive_with+without-CKD / Celltypes from Cells and Nuclei per compartment and clinical group

PRUNE2 STOX2 CPD RIMS2

1.95e-04188684af740fa78542438fdff627ea1f74f4eee43316be
ToppCellFetal_29-31_weeks-Epithelial-lung_neuroendocrine_cell_(PNEC)-D150|Fetal_29-31_weeks / Lineage, Cell type, age group and donor

PRUNE2 POTEI RIMS2 RGS7

1.95e-04188684c4c3b21ab723b0e9beff9ec84f8d68485f771528
ToppCellrenal_medulla_nuclei|World / Celltypes from Cells and Nuclei per compartment and clinical group

STOX2 ANK3 KCTD16 SIM1

1.99e-04189684830d9cd0dd706bce22eb2416f07b2c31c870a05a
ToppCellILEUM-non-inflamed-(1)_T_cell-(1)_CD8_Trm|(1)_T_cell / shred on tissue, inflammation_status, cell class(v3), cell subclass (v2)

CUL3 RPL37 BCLAF1 PNISR

1.99e-041896842c8a2fb76ea002bac554bc1c761ce960b5e116e1
ToppCellBALF-PFMC-Severe-critical_progression_d12-22_with-steroid-Lymphocytic-Lymphocytic_T-mature_alpha-beta_T_cell-T_CD4_c03-ITGA4|Severe-critical_progression_d12-22_with-steroid / Compartment, severity and other cell annotations on 10x 3' data (130k)

CUL3 ANK3 PHF3 PYHIN1

2.03e-0419068491ba66d4b56c59523485b17738e93f14bb00afa4
ToppCellPCW_10-12-Epithelial-Epithelial_neuroendo|PCW_10-12 / Celltypes from embryonic and fetal-stage human lung

PRUNE2 POTEJ RIMS2 RGS7

2.03e-041906842375e604eacd38f61f3e661ba2f76d286fcceca7
ToppCellwk_08-11-Epithelial-Proximal_epithelial-intermediate_neuroendocrine|wk_08-11 / Celltypes from embryonic and fetal-stage human lung

POTEI POTEJ RIMS2 RGS7

2.03e-041906845f1863bce9400b7c932f0e4d0e012ec4e8d7e555
ToppCelldroplet-Spleen-nan-18m-Lymphocytic-B_cell|Spleen / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation

RPL37 ZNF608 MYCBP2 PYHIN1

2.03e-04190684ee7b60cdf93c695ea2d59a170ca8cf4dc93e7eb2
ToppCellPCW_07-8.5-Epithelial-Epithelial_neuroendo-epi_neuroendocrine1[NE1]_(11)|PCW_07-8.5 / Celltypes from embryonic and fetal-stage human lung

PRUNE2 POTEI RIMS2 RGS7

2.03e-04190684b1095b2a7467c152d16e4f19a9515aeb61fc9e3d
ToppCellPBMC_fresh-frozen-Mild-Moderate_progression_d12-25|PBMC_fresh-frozen / Compartment, severity and other cell annotations on 10x 3' data (130k)

PHF3 BCLAF1 RICTOR CHD1

2.07e-041916841ecd9849d14d5ebf3daf610e83fb50820cafd3ed
ToppCelldroplet-Lung-LUNG-1m-Mesenchymal-Myofibroblast|Lung / Lung_Trachea - method, tissue, subtissue, age, lineage, cell ontology and free annotation

KCTD16 LMOD1 RIMS2 SAMD14

2.07e-041916849d3fa8d8138700640cc7927521c7635299df697d
ToppCellrenal_cortex_nuclei-Hypertensive_with+without-CKD-Epithelial-Proximal_tubule_epithelial_cell-kidney_proximal_tubule_epithelial_cell-Adaptive_/_Maladaptive_/_Repairing_Proximal_Tubule_Epithelial_Cell|Hypertensive_with+without-CKD / Celltypes from Cells and Nuclei per compartment and clinical group

PRUNE2 STOX2 ZNF608 KCTD16

2.07e-041916841cb02007adb344f17ef73d58890f91298c7cf5a1
ToppCelldroplet-Lung-LUNG-1m-Mesenchymal-pulmonary_interstitial_fibroblast|Lung / Lung_Trachea - method, tissue, subtissue, age, lineage, cell ontology and free annotation

KCTD16 LMOD1 RIMS2 SAMD14

2.07e-04191684d04ed1e04b8cb904237d8e8388fe7740c724237b
ToppCellhuman_hepatoblastoma-Tumor_cells|World / Sample and Cell Type and Tumor Cluster (all cells)

PHF3 RICTOR SREK1 PNISR

2.11e-04192684916fbec1c7ab7969bda711886ac88e877e30c280
ToppCell10x5'-lymph-node_spleen-Lymphocytic_T_CD4-T_CD4/CD8|lymph-node_spleen / Manually curated celltypes from each tissue

KMT2C ANK3 CHD1 SREK1

2.11e-0419268447646d7e4990be85072987f92bf18d52f8da752e
ToppCell10x3'2.3-week_14-16-Hematopoietic-HSC/MPP_and_pro-ELP|week_14-16 / cell types per 3 fetal stages;per 3',per 5'

ZNF608 MYCBP2 CHD1 PNISR

2.11e-0419268438ec82aa2ec4f2c0a843e83f7fe54f6b2483ca3d
ToppCellcontrol-Lymphoid-CTL|Lymphoid / Severity, Lineage and Cell class of Nasopharyngeal (NS) Samples from Patients and Controls

BCLAF1 PRPF38B PNISR PYHIN1

2.16e-0419368489d407a88b5956559a589425b89b3eb8dc78e1dd
ToppCelldroplet-Lung-1m-Mesenchymal-myofibroblast-myofibroblast_cell-pulmonary_interstitial_myofibroblast|1m / method, tissue, age, lineage, sublineage, cell ontologies, cell type and subtype

KCTD16 LMOD1 RIMS2 SAMD14

2.16e-041936842b80991e7ba7640f7ab2139d30e4c54d8e533862
ToppCelldroplet-Lung-1m-Mesenchymal-myofibroblast-myofibroblast_cell|1m / method, tissue, age, lineage, sublineage, cell ontologies, cell type and subtype

KCTD16 LMOD1 RIMS2 SAMD14

2.16e-0419368490cfc34c2d0d7c70f071703d35db1d6037961481
ToppCellhuman_hepatoblastoma|World / Sample and Cell Type and Tumor Cluster (all cells)

PHF3 RICTOR SREK1 PNISR

2.16e-04193684e6a688bc834f845ff64dae1be64f073eec5091a1
ToppCellCOVID-19_Mild|World / Disease condition and Cell class

TENT4B BCLAF1 RICTOR CHD1

2.16e-041936847256a5a491536c525b31ae96d47ab5c6303cb73a
ToppCellfacs-Brain_Non-Myeloid-Cerebellum-24m-Neuronal|Brain_Non-Myeloid / Brain_Non-Myeloid_Brain_Myeloid - method, tissue, subtissue, age, lineage, cell ontology and free annotation

PRUNE2 STXBP1 LHX3 SAMD14

2.16e-041936845fb7808dd971c1cc64c2bd4f8f1de646fb2d77f4
ToppCellPCW_13-14-Epithelial-Epithelial_neuroendo-epi_neuroendocrine1[NE1]_(11)|PCW_13-14 / Celltypes from embryonic and fetal-stage human lung

POTEI POTEJ RIMS2 RGS7

2.24e-041956845f33ece997f074598b4201ff74f592ee07c86a06
ToppCelldroplet-Pancreas-PANCREAS-30m-Epithelial-pancreatic_B_cell|Pancreas / Large_Intestine_Pancreas_Liver - method, tissue, subtissue, age, lineage, cell ontology and free annotation

KMT2C RIF1 STXBP1 MYCBP2

2.24e-041956843e519cffa6144a62b06124642a14c9ff39b76554
ToppCell(1)_T_cells-(1)_T_CD4_naive|(1)_T_cells / Spleen cell shreds - cell class (v1) and cell subclass (v1)

ANK3 PNN PHF3 PNISR

2.24e-04195684d3fa551bc6f5ee5890af1040415e61ecd5d46201
ToppCellAdult-Mesenchymal-matrix_fibroblast_1_cell-D122|Adult / Lineage, Cell type, age group and donor

KCTD16 LMOD1 RFTN2 MEOX2

2.24e-04195684aa0add081881d349099d12efca5cdee098038d4e
ToppCellMid-temporal_gyrus_(MTG)-Neuronal|Mid-temporal_gyrus_(MTG) / Sample groups (6 Anatomical region groups), with 5 level hierarchy of cell types

STXBP1 KCTD16 RIMS2 RGS7

2.29e-04196684676c56b44ac29f7baecb62f49bb8597cc74c0a88
ToppCellCOVID-19_Mild-Classical_Monocyte-cMono_4|COVID-19_Mild / Disease condition and Cell class

SRSF4 RICTOR CHD1 SREK1

2.29e-041966843729d1444c65cad640377894decc64129bc3fd5b
ToppCellNeuron-Postmitotic-Excitatory_Neuron_-IPC/newborn-38|World / Primary Cells by Cluster

ZNF608 KCTD16 HECTD4 PNISR

2.29e-0419668438da0751941adca650fe9b383d9f343153978eb5
ToppCellBronchial-NucSeq-Epithelial-Epi_airway_neuro-secretory-Neuroendocrine|NucSeq / Cell types per location group and 10X technology with lineage, and cell group designations

POTEI POTEJ RIMS2 RGS7

2.29e-041966844bdc304c0c9d8bebe1a6a8a27e44acd1e8113725
ToppCellNeuron-Postmitotic-Excitatory_Neuron_-IPC/newborn|World / Primary Cells by Cluster

ZNF608 KCTD16 HECTD4 PNISR

2.29e-04196684721650a08d260faf530dbd52d4e9275d27f3bac2
ToppCellBrain_organoid-organoid_Kanton_Nature-Organoid-2M-Neuronal-ventral_progenitors_and_neurons_1|Organoid-2M / Sample Type, Dataset, Time_group, and Cell type.

ANK3 MYCBP2 KCTD16 RIMS2

2.33e-041976844961f66606f08e399508fd6cabca588e7ab406a8
ToppCellsystemic_lupus_erythematosus-flare|systemic_lupus_erythematosus / PBMC cell types (v2) per disease, treatment status, and sex

TCOF1 PHF3 RICTOR PYHIN1

2.38e-041986844c93ee921d56132d80832d8e94563f32ccf13bbc
ToppCellSomatosensory_Cortex_(S1)-Neuronal|Somatosensory_Cortex_(S1) / Sample groups (6 Anatomical region groups), with 5 level hierarchy of cell types

STXBP1 KCTD16 RIMS2 RGS7

2.38e-04198684c01091ef18e096d792ea2a7a715764a5b215355f
ToppCellHealthy_donor|World / disease group, cell group and cell class (v2)

RPL37 PNN PNISR PYHIN1

2.38e-041986841ed0b50c9754727a05c27b21f3546bf2e37eef7f
ToppCellPBMC_fresh-frozen|World / Compartment, severity and other cell annotations on 10x 3' data (130k)

RPL37 PNN MYCBP2 PNISR

2.38e-04198684dcc223a0396b8b673e4ed8c6733ec6cd74e9a03a
ToppCellprimary_auditory_cortex_(A1C)-Neuronal|primary_auditory_cortex_(A1C) / Sample groups (6 Anatomical region groups), with 5 level hierarchy of cell types

STXBP1 KCTD16 RIMS2 RGS7

2.38e-041986846d18b45eda4014759e6dd282d78ffd28df8a6044
ToppCellTracheal-10x3prime_v2-Stromal-Myofibroblastic-Muscle_smooth_airway_ASM|10x3prime_v2 / Cell types per location group and 10X technology with lineage, and cell group designations

PRUNE2 KCTD16 LMOD1 RIMS2

2.38e-04198684cbb63b255bdc92a557c5db1f08f7766ed9346607
ToppCellPrimary_Motor_Cortex_(M1)-Neuronal|Primary_Motor_Cortex_(M1) / Sample groups (6 Anatomical region groups), with 5 level hierarchy of cell types

STXBP1 KCTD16 RIMS2 RGS7

2.38e-041986844ca5ff320905ab4ff60ed90a5522227c782142a6
ToppCellcritical-Epithelial-FOXN4+|critical / Severity, Lineage and Cell class of Nasopharyngeal (NS) Samples from Patients and Controls

ADGRB2 SSRP1 PLCE1 OTUD7B

2.38e-041986846b160b3d6a2c1b1641c2c7dcec1a7ef38411fec9
ToppCellAnterior_Cingulate_gyrus_(CgG)-Neuronal|Anterior_Cingulate_gyrus_(CgG) / Sample groups (6 Anatomical region groups), with 5 level hierarchy of cell types

STXBP1 ANK3 RIMS2 RGS7

2.38e-041986840ff30edfd3c133a42e8cb96e1631a1143215f808
ToppCellNeuron-Postmitotic-Excitatory_Neuron_-Newborn-35|World / Primary Cells by Cluster

CEP170 ZNF608 BCLAF1 PNISR

2.38e-04198684de5214a85fe017eb23d4aa8af624464f062ec57e
ToppCellMild/Remission-B_naive-9|Mild/Remission / disease group and sub_cluster of B and Plasma cells(res = 0.5)

RPL37 PNN PNISR THRAP3

2.42e-04199684e9af3c6a05f435ac8d7066f54feb653012b51ffb
ToppCell(09)_Interm._secr.>cil.-(2)_GFP_FOXI1|(09)_Interm._secr.>cil. / shred by cell type by condition

DDX46 PHF3 BCLAF1 USP47

2.42e-04199684fc680f85ebd3bab4c72876a19a461b0afb5f51ce
DrugSuccimer

CEP170 CUL3 RIF1 RPL37 DDX46 ANK3 PNN ATAD5 PHF3 BCLAF1 SLTM PRPF38B CPD RFTN2 SREK1 RIMS2 PNISR USP47

2.00e-0812646818ctd:D004113
DrugMagnetite Nanoparticles

CEP170 CUL3 RIF1 RPL37 DDX46 ANK3 PNN ATAD5 PHF3 BCLAF1 SLTM PRPF38B CPD RFTN2 SREK1 RIMS2 PNISR USP47

3.46e-0813106818ctd:D058185
DrugZNS 114-666

RIF1 RBM15 SAFB DEK

1.39e-0549684CID000409441
DiseaseCombined pituitary hormone deficiencies, genetic form

LHX4 LHX3

4.76e-055652cv:C4273747
Diseasepanhypopituitarism (is_implicated_in)

LHX4 LHX3

9.96e-057652DOID:9410 (is_implicated_in)
Diseaseautism spectrum disorder (implicated_via_orthology)

TPH2 CHD8 CHD1 RIMS2

3.59e-04152654DOID:0060041 (implicated_via_orthology)
Diseasepancreatitis

STXBP1 HECTD4

5.62e-0416652EFO_0000278
Diseaseunipolar depression, response to bupropion, mood disorder

CUL3 STOX2

7.98e-0419652EFO_0003761, EFO_0004247, EFO_0006326
DiseaseNeurodevelopmental Disorders

CUL3 KMT2C STXBP1

1.15e-0393653C1535926
Diseaseesophageal carcinoma

HECTD4 PLCE1

2.00e-0330652EFO_0002916
Diseaseesophagus squamous cell carcinoma (is_implicated_in)

KMT2C RICTOR

4.45e-0345652DOID:3748 (is_implicated_in)

Protein segments in the cluster

PeptideGeneStartEntry
DGISDKSKKQRAGSE

ADGRB2

1106

O60241
KSNKRSEKSEATDGG

ATAD5

671

Q96QE3
SSGAREKMEKKTKSR

CEP170

981

Q5SW79
GKKRKRNTSSDNSDV

CHD8

541

Q9HCK8
SSSDGKAEKSRQTAK

ATN1

41

P54259
SRKESRLESSGKNKS

ABCF3

161

Q9NUQ8
SESKSDGRERSKKSS

CHD1

1371

O14646
KSQGDKRDRKNSASA

RBM15

711

Q96T37
TSSKSRKGEASDNKL

RFTN2

231

Q52LD8
EGSSKARKERTAFTK

MEOX1

166

P50221
SASGSSNKRKRDNKA

TENT4B

71

Q8NDF8
STSNEGGRRKEKSKR

OTUD7B

476

Q6GQQ9
GKTKRSVIRKDSSGS

KMT2C

1296

Q8NEZ4
DGGSETKKQRSKRTQ

KMT2C

3841

Q8NEZ4
SGSRESNMSSKKKAV

KCTD16

371

Q68DU8
EKQGRKRSSTGRDSK

CWF19L1

296

Q69YN2
SSRDTKGSKDKNSRS

PNN

671

Q9H307
KGSKDKNSRSDRKRS

PNN

676

Q9H307
KKGSDRNTGLSRDKD

LMOD1

191

P29536
MKRSRGGSKSDKDSV

LHX3

231

Q9UBR4
VKRSRGSSKQEKESS

LHX4

231

Q969G2
KRSGGKRKSDSSDSQ

MEOX2

161

P50222
KREKASSSGKRQSSR

HECTD4

2896

Q9Y4D8
KVETNKNSSGKDSSR

GARIN1B

276

Q96KD3
KGGKLSSESKTSNRR

RICTOR

1116

Q6R327
SESVSEKGDSQKGKR

RIMS2

566

Q9UQ26
SKGSKKERNSSGMAR

DEK

201

P35659
SKGSRESSGSRKQEK

BCLAF1

711

Q9NYF8
MSNLSKGTGSRKDTK

CUL3

1

Q13618
ETGTKRSKMSKEQTR

PYHIN1

146

Q6K0P9
VRSSTDSNNESKKGK

CPD

871

O75976
SKSEKAGSEKRSSRR

ANK3

4066

Q12955
NAKDGSGSEEKRKSV

MIDEAS

481

Q6PJG2
NRSRSKEKTDGGESS

DDX46

116

Q7L014
KKKSGNSMDRRTSFE

RGS7

451

P49802
SAGKSRSKSKDQAEE

SRSF4

261

Q08170
RKGLSAEKMSSKSDT

PRUNE2

2606

Q8WUY3
RKQSSGGQKSESKMS

SERF1A

36

O75920
SSSKESSRISDGKKQ

TCOF1

1041

Q13428
KGREETKGRKMTQQS

GGTA1

76

Q4G0N0
EGNSSRKSSLKDKSR

PLCE1

791

Q9P212
MTKGTSSFGKRRNKT

RPL37

1

P61927
SSEAKEEGSRKKRSG

RIF1

1556

Q5UIP0
SGDQDDSTMKTLRSK

POTEJ

46

P0CG39
KENDEKSSSRSSGDK

SLTM

471

Q9NWH9
DNRKGAKSRLSSSKS

SIM1

366

P81133
KSRKEKGSNRLSMGS

SAMD14

206

Q8IZD0
KGEDGESTKSRRQSK

MYCBP2

611

O75592
SGDQDDSTMKTLRSK

POTEI

46

P0CG38
ASSDSGDRTNLKRKK

VPS8

106

Q8N3P4
TSMRKSSNDRDGKEK

SREK1

436

Q8WXA9
SLKDFSSSKRMNTGE

STXBP1

306

P61764
GSKERASKSQDRKSA

SAFB

581

Q15424
SSSGENKSKKKRRRS

SSRP1

671

Q08945
SGKSKGKARSKSTRA

ARMCX1

166

Q9P291
NGKSKTSENSSAKRE

TSGA13

11

Q96PP4
EKKSEKESSRGRGNN

UBAP2

121

Q5T6F2
MSKTNKSKSGSRSSR

THRAP3

1

Q9Y2W1
KAKERSRSMDNSKGP

STOX2

486

Q9P2F5
NESKEKSNKRSRSGS

PRPF38B

461

Q5VTL8
RSVAGSKKEKENSSS

ZNF609

151

O15014
ENSSSKSKKERSEGV

ZNF609

161

O15014
TSSRRTKANEGKKET

USP47

991

Q96K76
TDGKASRDSRNVDKK

PHF3

1981

Q92576
DKGNKGSSKREAATE

TPH2

46

Q8IWU9
QSSRGAKRDKDAGKS

ZNF608

196

Q9ULD9
SRSVEKSQRSGKKAS

PNISR

781

Q8TF01
FEAKSRSSKNETKGR

WSB2

66

Q9NYS7
KTNIKSEGKGSSRSR

WDR27

471

A2RRH5
SSRSESGRMKKSDNK

GTF3C1

756

Q12789
RRQKEAKTKSDSGTA

UIMC1

536

Q96RL1