Cluster composition

Functions

Category	Name	IntersectionWithQuery	PValue	GenesInTerm	GenesInQuery	GenesInTermInQuery	ID
GeneOntologyBiologicalProcess	vesicle cargo loading	CTAGE9 CTAGE8 CTAGE15 CTAGE6 CTAGE4	1.97e-08	36	48	5	GO:0035459
GeneOntologyBiologicalProcess	endoplasmic reticulum to Golgi vesicle-mediated transport	CTAGE9 USO1 CTAGE8 CTAGE15 CTAGE6 CTAGE4	1.79e-06	159	48	6	GO:0006888
GeneOntologyBiologicalProcess	Golgi vesicle transport	CTAGE9 USO1 CTAGE8 CTAGE15 MACF1 CTAGE6 CTAGE4	1.26e-05	339	48	7	GO:0048193
GeneOntologyCellularComponent	endoplasmic reticulum exit site	CTAGE9 CTAGE8 CTAGE15 CTAGE6 CTAGE4	3.30e-08	42	46	5	GO:0070971
GeneOntologyCellularComponent	Myb complex	CLTC MYBL2	2.83e-05	4	46	2	GO:0031523
GeneOntologyCellularComponent	nuclear protein-containing complex	HDAC9 BPTF KMT2D UBAP2L CLTC MED25 KMT2E JMJD1C PHC1 MYBL2	6.83e-04	1377	46	10	GO:0140513
GeneOntologyCellularComponent	eukaryotic 43S preinitiation complex	EIF3H DHX29	7.91e-04	19	46	2	GO:0016282
GeneOntologyCellularComponent	histone deacetylase complex	HDAC9 KMT2E JMJD1C	8.68e-04	85	46	3	GO:0000118
GeneOntologyCellularComponent	translation preinitiation complex	EIF3H DHX29	8.78e-04	20	46	2	GO:0070993
Domain	-	DSP MACF1	7.72e-05	6	43	2	3.90.1290.10
Domain	Plectin_repeat	DSP MACF1	1.08e-04	7	43	2	IPR001101
Domain	Plectin	DSP MACF1	1.08e-04	7	43	2	PF00681
Domain	PLEC	DSP MACF1	1.08e-04	7	43	2	SM00250
Domain	SET_dom	PRDM10 KMT2D KMT2E	2.07e-04	50	43	3	IPR001214
Domain	SET	PRDM10 KMT2D KMT2E	2.07e-04	50	43	3	PS50280
Domain	ZINC_FINGER_C2H2_2	ZNF137P PRDM10 ZNF613 ZFHX3 EEA1 GPATCH8 ZNF853 ZNF623	3.38e-04	775	43	8	PS50157
Domain	ZINC_FINGER_C2H2_1	ZNF137P PRDM10 ZNF613 ZFHX3 EEA1 GPATCH8 ZNF853 ZNF623	3.44e-04	777	43	8	PS00028
Domain	Znf_FYVE_PHD	BPTF KMT2D EEA1 KMT2E	3.58e-04	147	43	4	IPR011011
Domain	Znf_C2H2	ZNF137P PRDM10 ZNF613 ZFHX3 EEA1 GPATCH8 ZNF853 ZNF623	4.36e-04	805	43	8	IPR007087
Domain	ZnF_C2H2	ZNF137P PRDM10 ZNF613 ZFHX3 EEA1 GPATCH8 ZNF853 ZNF623	4.47e-04	808	43	8	SM00355
Domain	PHD	BPTF KMT2D KMT2E	6.84e-04	75	43	3	PF00628
Domain	Znf_PHD-finger	BPTF KMT2D KMT2E	7.96e-04	79	43	3	IPR019787
Domain	PHD	BPTF KMT2D KMT2E	1.12e-03	89	43	3	SM00249
Domain	zf-C2H2_jaz	PRDM10 GPATCH8	1.16e-03	22	43	2	PF12171
Domain	Znf_C2H2_jaz	PRDM10 GPATCH8	1.16e-03	22	43	2	IPR022755
Domain	Znf_PHD	BPTF KMT2D KMT2E	1.20e-03	91	43	3	IPR001965
Domain	ZF_PHD_2	BPTF KMT2D KMT2E	1.36e-03	95	43	3	PS50016
Domain	ZF_PHD_1	BPTF KMT2D KMT2E	1.40e-03	96	43	3	PS01359
Domain	Spectrin_repeat	DSP MACF1	2.02e-03	29	43	2	IPR002017
Domain	Znf_C2H2-like	PRDM10 ZNF613 ZFHX3 EEA1 GPATCH8 ZNF853 ZNF623	2.10e-03	796	43	7	IPR015880
Domain	Spectrin/alpha-actinin	DSP MACF1	2.46e-03	32	43	2	IPR018159
Domain	SPEC	DSP MACF1	2.46e-03	32	43	2	SM00150
Domain	Znf_RING/FYVE/PHD	BPTF KMT2D IRF2BPL EEA1 KMT2E	3.91e-03	459	43	5	IPR013083
Domain	SET	KMT2D KMT2E	4.01e-03	41	43	2	PF00856
Domain	zf-C2H2	ZNF137P PRDM10 ZNF613 ZFHX3 ZNF853 ZNF623	4.83e-03	693	43	6	PF00096
Domain	SET	KMT2D KMT2E	5.03e-03	46	43	2	SM00317
Domain	HMG_box	KMT2D TOX3	6.62e-03	53	43	2	PF00505
Domain	HMG	KMT2D TOX3	6.87e-03	54	43	2	SM00398
Pathway	WP_VEGFAVEGFR2_SIGNALING	HDAC9 UBAP2L PDE4DIP CLTC EEA1 EIF3H DHX29	4.13e-05	431	32	7	M39729
Pubmed	Genome-wide CRISPR screens identify novel regulators of wild-type and mutant p53 stability.	DLG5 CYFIP1 APEX2 USO1 DSP CLTC MED25 MACF1 MYBL2	1.44e-07	588	50	9	38580884
Pubmed	An Oct4-centered protein interaction network in embryonic stem cells.	BPTF KMT2D MED25 JMJD1C PHC1 MYBL2	1.49e-07	167	50	6	20362541
Pubmed	BioID-based intact cell interactome of the Kv1.3 potassium channel identifies a Kv1.3-STAT3-p53 cellular signaling pathway.	DLG5 CYFIP1 FBXO5 USO1 DSP UBAP2L MACF1 DHX29 JMJD1C	6.79e-07	708	50	9	39231216
Pubmed	In-Depth In Vivo Crosslinking in Minutes by a Compact, Membrane-Permeable, and Alkynyl-Enrichable Crosslinker.	BPTF DSP TCHHL1 CTAGE8 CLTC CTAGE15 MACF1 CTAGE6 EEA1 CTAGE4 CEP128 CCDC89	6.93e-07	1442	50	12	35575683
Pubmed	Large-scale characterization of HeLa cell nuclear phosphoproteins.	BPTF KMT2D DSP UBAP2L CLTC IRF2BPL GPATCH8 DHX29 MYBL2	1.42e-06	774	50	9	15302935
Pubmed	Mapping the MOB proteins' proximity network reveals a unique interaction between human MOB3C and the RNase P complex.	DLG5 CYFIP1 USO1 DSP UBAP2L CLTC EEA1	1.62e-06	399	50	7	37536630
Pubmed	KMT2D regulates p63 target enhancers to coordinate epithelial homeostasis.	KMT2D TP63	2.03e-06	2	50	2	29440247
Pubmed	Altered expression of MLL methyltransferase family genes in breast cancer.	KMT2D KMT2E	2.03e-06	2	50	2	23754336
Pubmed	Proximity-dependent biotin identification (BioID) reveals a dynamic LSD1-CoREST interactome during embryonic stem cell differentiation.	KMT2D USO1 DSP ZFHX3 JMJD1C PHC1 MYBL2	2.20e-06	418	50	7	34709266
Pubmed	Human transcription factor protein interaction networks.	EPC2 BPTF KMT2D DIS3L UBAP2L IRF2BPL ZFHX3 EIF3H GPATCH8 JMJD1C MYBL2	4.62e-06	1429	50	11	35140242
Pubmed	TIF1γ inhibits lung adenocarcinoma EMT and metastasis by interacting with the TAF15/TBP complex.	BPTF USO1 DSP UBAP2L CLTC	6.00e-06	179	50	5	36261009
Pubmed	Identification of the SOX2 Interactome by BioID Reveals EP300 as a Mediator of SOX2-dependent Squamous Differentiation and Lung Squamous Cell Carcinoma Growth.	BPTF KMT2D TP63 JMJD1C	6.39e-06	83	50	4	28794006
Pubmed	A human skeletal muscle interactome centered on proteins involved in muscular dystrophies: LGMD interactome.	XIRP2 DSP PDE4DIP CLTC MACF1 KMT2E JMJD1C	6.85e-06	497	50	7	23414517
Pubmed	Deletion of Mea6 in Cerebellar Granule Cells Impairs Synaptic Development and Motor Performance.	CTAGE9 CTAGE8	1.21e-05	4	50	2	33718348
Pubmed	Specific expression and regulation of the new melanoma inhibitory activity-related gene MIA2 in hepatocytes.	CTAGE9 CTAGE8	1.21e-05	4	50	2	12586826
Pubmed	Mea6 controls VLDL transport through the coordinated regulation of COPII assembly.	CTAGE9 CTAGE8	1.21e-05	4	50	2	27311593
Pubmed	MEA6 Deficiency Impairs Cerebellar Development and Motor Performance by Tethering Protein Trafficking.	CTAGE9 CTAGE8	1.21e-05	4	50	2	31244610
Pubmed	Reduced cholesterol and triglycerides in mice with a mutation in Mia2, a liver protein that localizes to ER exit sites.	CTAGE9 CTAGE8	1.21e-05	4	50	2	21807889
Pubmed	A genome-wide association study identifies two new susceptibility loci for lung adenocarcinoma in the Japanese population.	BPTF TP63	1.21e-05	4	50	2	22797724
Pubmed	SRCAP complex promotes lung cancer progression by reprograming the oncogenic transcription of Hippo-YAP/TAZ signaling pathway.	BPTF KMT2D CYFIP1 DSP UBAP2L CLTC JMJD1C	1.30e-05	549	50	7	38280479
Pubmed	BioID-based Identification of Skp Cullin F-box (SCF)β-TrCP1/2 E3 Ligase Substrates.	DLG5 FBXO5 UBAP2L CLTC GPATCH8	1.85e-05	226	50	5	25900982
Pubmed	Specific phosphopeptide enrichment with immobilized titanium ion affinity chromatography adsorbent for phosphoproteome analysis.	CTAGE9 CTAGE8	2.02e-05	5	50	2	18630941
Pubmed	cTAGE: a cutaneous T cell lymphoma associated antigen family with tumor-specific splicing.	CTAGE9 CTAGE4	2.02e-05	5	50	2	12839582
Pubmed	Large scale localization of protein phosphorylation by use of electron capture dissociation mass spectrometry.	CTAGE9 CTAGE8	2.02e-05	5	50	2	19131326
Pubmed	Characterization and expression pattern of the novel MIA homolog TANGO.	CTAGE9 CTAGE8	2.02e-05	5	50	2	15183315
Pubmed	Mea6/cTAGE5 cooperates with TRAPPC12 to regulate PTN secretion and white matter development.	CTAGE9 CTAGE8	2.02e-05	5	50	2	38439956
Pubmed	A tissue-specific atlas of mouse protein phosphorylation and expression.	CTAGE9 CTAGE8	2.02e-05	5	50	2	21183079
Pubmed	A novel member of murine Polycomb-group proteins, Sex comb on midleg homolog protein, is highly conserved, and interacts with RAE28/mph1 in vitro.	MACF1 PHC1	2.02e-05	5	50	2	10653359
Pubmed	USP7 targets XIAP for cancer progression: Establishment of a p53-independent therapeutic avenue for glioma.	KMT2D DSP CLTC MACF1 EEA1	2.19e-05	234	50	5	36243803
Pubmed	Prediction of the coding sequences of mouse homologues of KIAA gene: II. The complete nucleotide sequences of 400 mouse KIAA-homologous cDNAs identified by screening of terminal sequences of cDNA clones randomly sampled from size-fractionated libraries.	UBAP2L PDE4DIP CLTC MACF1 GPATCH8 SENP7	2.55e-05	407	50	6	12693553
Pubmed	Two-Dimensional Fractionation Method for Proteome-Wide Cross-Linking Mass Spectrometry Analysis.	CYFIP1 DSP CTAGE8 CLTC MACF1 EEA1 EIF3H DHX29	2.60e-05	847	50	8	35235311
Pubmed	HENA, heterogeneous network-based data set for Alzheimer's disease.	APEX2 PDE4DIP MACF1 EIF3H	2.75e-05	120	50	4	31413325
Pubmed	Proteomic analyses reveal distinct chromatin-associated and soluble transcription factor complexes.	EPC2 BPTF PRDM10 KMT2D USO1 DSP JMJD1C MYBL2	2.83e-05	857	50	8	25609649
Pubmed	Coding exons function as tissue-specific enhancers of nearby genes.	HDAC9 TP63	3.03e-05	6	50	2	22442009
Pubmed	Genetic risk factors for ischaemic stroke and its subtypes (the METASTROKE collaboration): a meta-analysis of genome-wide association studies.	HDAC9 ZFHX3	3.03e-05	6	50	2	23041239
Pubmed	The PHLPP1 N-Terminal Extension Is a Mitotic Cdk1 Substrate and Controls an Interactome Switch.	DLG5 DSP UBAP2L CLTC JMJD1C	3.36e-05	256	50	5	33397691
Pubmed	Histone methyltransferase DOT1L coordinates AR and MYC stability in prostate cancer.	KMT2D CYFIP1 DSP UBAP2L CLTC	3.89e-05	264	50	5	32814769
Pubmed	Endosomal transport of ErbB-2: mechanism for nuclear entry of the cell surface receptor.	CLTC EEA1	4.23e-05	7	50	2	16314522
Pubmed	Hes1 regulates corneal development and the function of corneal epithelial stem/progenitor cells.	DSP TP63	4.23e-05	7	50	2	18292208
Pubmed	cTAGE5 deletion in pancreatic β cells impairs proinsulin trafficking and insulin biogenesis in mice.	CTAGE9 CTAGE8	4.23e-05	7	50	2	29133483
Pubmed	MRGX is a novel transcriptional regulator that exhibits activation or repression of the B-myb promoter in a cell type-dependent manner.	HDAC9 MYBL2	4.23e-05	7	50	2	14506250
Pubmed	Skirting the pitfalls: a clear-cut nomenclature for H3K4 methyltransferases.	KMT2D KMT2E	5.64e-05	8	50	2	23130995
Pubmed	Genome-wide association analysis identifies new lung cancer susceptibility loci in never-smoking women in Asia.	BPTF TP63	5.64e-05	8	50	2	23143601
Pubmed	Rab1 recruitment of p115 into a cis-SNARE complex: programming budding COPII vesicles for fusion.	USO1 EEA1	5.64e-05	8	50	2	10903204
Pubmed	Four enzymes cooperate to displace histone H1 during the first minute of hormonal gene activation.	BPTF KMT2D	5.64e-05	8	50	2	21447625
Pubmed	Membrane targeting and activation of the Lowe syndrome protein OCRL1 by rab GTPases.	CLTC EEA1	5.64e-05	8	50	2	16902405
Pubmed	Cooperation between the transcription factors p63 and IRF6 is essential to prevent cleft palate in mice.	DSP TP63	5.64e-05	8	50	2	20424327
Pubmed	Cullin 1 (CUL1) Promotes Primary Ciliogenesis through the Induction of Ubiquitin-Proteasome-Dependent Dvl2 Degradation.	APEX2 PDE4DIP MACF1 GPATCH8	6.91e-05	152	50	4	34299191
Pubmed	EIF3H Orchestrates Hippo Pathway-Mediated Oncogenesis via Catalytic Control of YAP Stability.	CLTC EIF3H DHX29	6.96e-05	55	50	3	32269044
Pubmed	Confirmed rare copy number variants implicate novel genes in schizophrenia.	HDAC9 CYFIP1	7.25e-05	9	50	2	20298200
Pubmed	Misexpression of MIA disrupts lung morphogenesis and causes neonatal death.	CTAGE9 CTAGE8	7.25e-05	9	50	2	18342301
Pubmed	Prediction of the coding sequences of mouse homologues of KIAA gene: IV. The complete nucleotide sequences of 500 mouse KIAA-homologous cDNAs identified by screening of terminal sequences of cDNA clones randomly sampled from size-fractionated libraries.	HDAC9 DIS3L MACF1 IRF2BPL ZNF623 JMJD1C	7.37e-05	493	50	6	15368895
Pubmed	CHK2-BRCA1 tumor-suppressor axis restrains oncogenic Aurora-A kinase to ensure proper mitotic microtubule assembly.	BPTF USO1 DSP UBAP2L CLTC EIF3H	7.46e-05	494	50	6	26831064
Pubmed	A High-Density Map for Navigating the Human Polycomb Complexome.	BPTF KMT2D FBXO5 PHC1 SENP7 MYBL2	7.54e-05	495	50	6	27705803
Pubmed	The Epigenetic Factor Landscape of Developing Neocortex Is Regulated by Transcription Factors Pax6→ Tbr2→ Tbr1.	HDAC9 BPTF KMT2D PHC1	7.83e-05	157	50	4	30186101
Pubmed	A B-Myb complex containing clathrin and filamin is required for mitotic spindle function.	CLTC MYBL2	9.05e-05	10	50	2	18548008
Pubmed	USP25-PKM2-glycolysis axis contributes to ischemia reperfusion-induced acute kidney injury by promoting M1-like macrophage polarization and proinflammatory response.	CLTC USP25	1.10e-04	11	50	2	36894047
Pubmed	PRC1 and PRC2 are not required for targeting of H2A.Z to developmental genes in embryonic stem cells.	EPC2 KMT2D PHC1	1.15e-04	65	50	3	22496869
Pubmed	Tagging genes with cassette-exchange sites.	BPTF FBXO5 MACF1 GPATCH8 DHX29	1.20e-04	335	50	5	15741177
Pubmed	CYLD Regulates Centriolar Satellites Proteostasis by Counteracting the E3 Ligase MIB1.	DLG5 CYFIP1 CLTC EEA1	1.38e-04	182	50	4	31067453
Pubmed	Targeting TRIM37-driven centrosome dysfunction in 17q23-amplified breast cancer.	DLG5 KMT2D DSP JMJD1C	1.44e-04	184	50	4	32908313
Pubmed	Resolution of cell fate decisions revealed by single-cell gene expression analysis from zygote to blastocyst.	BPTF TOX3 ZFHX3 EIF3H ZNF623 PHC1 MYBL2	1.49e-04	808	50	7	20412781
Pubmed	Ultrastructural cartilage abnormalities in MIA/CD-RAP-deficient mice.	CTAGE9 CTAGE8	1.56e-04	13	50	2	11839810
Pubmed	BMI1-UBR5 axis regulates transcriptional repression at damaged chromatin.	UBAP2L PHC1	1.56e-04	13	50	2	27647897
Pubmed	ELMOD1 Stimulates ARF6-GTP Hydrolysis to Stabilize Apical Structures in Developing Vestibular Hair Cells.	CLTC EEA1	1.56e-04	13	50	2	29222402
Pubmed	Ontogenesis of the tear drainage system requires Prickle1-driven polarized basement membrane deposition.	TP63 CLTC	1.56e-04	13	50	2	33144400
Pubmed	Loss of mXinalpha, an intercalated disk protein, results in cardiac hypertrophy and cardiomyopathy with conduction defects.	XIRP2 DSP	1.82e-04	14	50	2	17766470
Pubmed	Cardiomyocyte orientation modulated by the Numb family proteins-N-cadherin axis is essential for ventricular wall morphogenesis.	CLTC EEA1	1.82e-04	14	50	2	31300538
Pubmed	Perp is a p63-regulated gene essential for epithelial integrity.	DSP TP63	1.82e-04	14	50	2	15797384
Pubmed	LRRC31 inhibits DNA repair and sensitizes breast cancer brain metastasis to radiation therapy.	DSP UBAP2L CLTC TRIM64C	2.06e-04	202	50	4	33005030
Pubmed	p63 control of desmosome gene expression and adhesion is compromised in AEC syndrome.	DSP TP63	2.10e-04	15	50	2	23108156
Pubmed	cTAGE5/MEA6 plays a critical role in neuronal cellular components trafficking and brain development.	CTAGE9 CTAGE8	2.10e-04	15	50	2	30224460
Pubmed	Periderm prevents pathological epithelial adhesions during embryogenesis.	DSP TP63	2.10e-04	15	50	2	25133425
Pubmed	Tumor suppressor BAP1 nuclear import is governed by transportin-1.	CYFIP1 USO1 DSP UBAP2L CLTC MACF1 EEA1 EIF3H	2.17e-04	1149	50	8	35446349
Pubmed	The in vivo Interaction Landscape of Histones H3.1 and H3.3.	BPTF GPATCH8 JMJD1C PHC1 SENP7 MYBL2	2.30e-04	608	50	6	36089195
Pubmed	Integrative analysis of kinase networks in TRAIL-induced apoptosis provides a source of potential targets for combination therapy.	DLG5 DSP UBAP2L CLTC GPATCH8	2.75e-04	401	50	5	25852190
Pubmed	In mouse brain profilin I and profilin II associate with regulators of the endocytic pathway and actin assembly.	CYFIP1 CLTC	3.05e-04	18	50	2	9463375
Pubmed	PERP regulates enamel formation via effects on cell-cell adhesion and gene expression.	DSP TP63	3.41e-04	19	50	2	21285247
Pubmed	Identification of motif-based interactions between SARS-CoV-2 protein domains and human peptide ligands pinpoint antiviral targets.	XIRP2 UBAP2L PDE4DIP KMT2E	3.55e-04	233	50	4	37704626
Pubmed	Complementary proteomics strategies capture an ataxin-1 interactome in Neuro-2a cells.	USO1 UBAP2L TOX3 IRF2BPL GPATCH8 JMJD1C	3.71e-04	665	50	6	30457570
Pubmed	Proteome-scale mapping of binding sites in the unstructured regions of the human proteome.	XIRP2 TP63 CLTC IRF2BPL KMT2E	3.78e-04	430	50	5	35044719
Pubmed	Analysis of interaction partners for eukaryotic translation elongation factor 1A M-domain by functional proteomics.	XIRP2 MACF1	3.79e-04	20	50	2	21689717
Pubmed	The Nse5/6-like SIMC1-SLF2 complex localizes SMC5/6 to viral replication centers.	BPTF CYFIP1 DSP UBAP2L CLTC JMJD1C MYBL2	4.08e-04	954	50	7	36373674
Pubmed	Human Immunodeficiency Virus Type 1 Vpr Mediates Degradation of APC1, a Scaffolding Component of the Anaphase-Promoting Complex/Cyclosome.	DLG5 UBAP2L JMJD1C MYBL2	4.10e-04	242	50	4	34011540
Pubmed	Study of FOXO1-interacting proteins using TurboID-based proximity labeling technology.	XIRP2 USO1 DSP UBAP2L	4.16e-04	243	50	4	36964488
Pubmed	Broad histone H3K4me3 domains in mouse oocytes modulate maternal-to-zygotic transition.	KMT2D KMT2E	4.18e-04	21	50	2	27626377
Pubmed	The DNA sequence of human chromosome 7.	HDAC9 CTAGE9 CTAGE8 CTAGE4 ZNF853	4.25e-04	441	50	5	12853948
Pubmed	Structural basis for activity regulation of MLL family methyltransferases.	KMT2D KMT2E	4.59e-04	22	50	2	26886794
Pubmed	Systematically defining selective autophagy receptor-specific cargo using autophagosome content profiling.	BPTF CYFIP1 DSP UBAP2L CLTC MACF1 EEA1 KLHL8	4.88e-04	1297	50	8	33545068
Pubmed	cDNAs with long CAG trinucleotide repeats from human brain.	KMT2D TOX3	5.03e-04	23	50	2	9225980
Pubmed	Proteomic profiling of the TRAF3 interactome network reveals a new role for the ER-to-Golgi transport compartments in innate immunity.	USO1 PDE4DIP	5.03e-04	23	50	2	22792062
Pubmed	Characterization of the zinc-induced Shank3 interactome of mouse synaptosome.	XIRP2 USO1 ZFHX3	5.27e-04	109	50	3	29111324
Pubmed	A novel role for the peptidyl-prolyl cis-trans isomerase Cyclophilin A in DNA-repair following replication fork stalling via the MRE11-RAD50-NBS1 complex.	BPTF DLG5 CYFIP1 MACF1 IRF2BPL	5.78e-04	472	50	5	38943005
Pubmed	An antibody-based proximity labeling map reveals mechanisms of SARS-CoV-2 inhibition of antiviral immunity.	FBXO5 USO1 AKAP3 GPATCH8 JMJD1C MYBL2	6.20e-04	733	50	6	34672954
Pubmed	USP7 Regulates Cytokinesis through FBXO38 and KIF20B.	GPATCH8 JMJD1C MYBL2	6.32e-04	116	50	3	30804394
Pubmed	Proteome-wide identification of HSP70/HSC70 chaperone clients in human cells.	DLG5 CYFIP1 USO1 DSP UBAP2L CLTC IRF2BPL DHX29	6.89e-04	1367	50	8	32687490
Pubmed	Arf GTPase-activating protein ASAP1 interacts with Rab11 effector FIP3 and regulates pericentrosomal localization of transferrin receptor-positive recycling endosome.	PDE4DIP MACF1	6.95e-04	27	50	2	18685082
Pubmed	NANOG-dependent function of TET1 and TET2 in establishment of pluripotency.	BPTF JMJD1C	6.95e-04	27	50	2	23395962
Pubmed	Beclin 1 regulates recycling endosome and is required for skin development in mice.	TP63 EEA1	6.95e-04	27	50	2	30701202
Pubmed	Comparative host-coronavirus protein interaction networks reveal pan-viral disease mechanisms.	DIS3L UBAP2L PDE4DIP USP25 EIF3H CEP128	7.18e-04	754	50	6	33060197
Interaction	CTAGE1 interactions	CTAGE8 CTAGE15 CTAGE6 CTAGE4	5.88e-09	10	48	4	int:CTAGE1
Interaction	BMI1 interactions	DLG5 UBAP2L CLTC EEA1 EIF3H GPATCH8 KLHL8 DHX29 PHC1	2.17e-05	659	48	9	int:BMI1
Interaction	FBXO42 interactions	DLG5 CYFIP1 USO1 DSP CLTC MACF1	3.32e-05	259	48	6	int:FBXO42
Interaction	WWTR1 interactions	HDAC9 BPTF KMT2D CYFIP1 TP63 CLTC JMJD1C	5.89e-05	422	48	7	int:WWTR1
Cytoband	7q35	CTAGE8 CTAGE15 CTAGE6 CTAGE4	4.07e-07	55	50	4	7q35
Cytoband	Ensembl 112 genes in cytogenetic band chr7q35	CTAGE8 CTAGE15 CTAGE6 CTAGE4	8.53e-07	66	50	4	chr7q35
GeneFamily	CTAGE family	CTAGE9 CTAGE8 CTAGE15 CTAGE6 CTAGE4	1.06e-10	15	39	5	907
GeneFamily	EF-hand domain containing\|Plakins	DSP MACF1	1.26e-04	8	39	2	939
GeneFamily	PHD finger proteins	BPTF KMT2D KMT2E	9.58e-04	90	39	3	88
GeneFamily	Ataxins\|Trinucleotide repeat containing	KMT2D TOX3	1.32e-03	25	39	2	775
GeneFamily	Zinc fingers C2H2-type\|Lysine methyltransferases\|PR/SET domain family	KMT2D KMT2E	2.44e-03	34	39	2	487
Coexpression	MITSIADES_RESPONSE_TO_APLIDIN_DN	HDAC9 FBXO5 DSP CLTC MACF1 MYBL2	7.93e-06	250	50	6	M11318
Coexpression	SCHAEFFER_PROSTATE_DEVELOPMENT_6HR_DN	CTAGE9 UBAP2L CTAGE8 CLTC MED25 ZFHX3 DHX29	3.52e-05	484	50	7	MM999
Coexpression	GSE3982_MEMORY_CD4_TCELL_VS_TH1_UP	ZNF137P USP25 MACF1 JMJD1C PHC1	3.67e-05	197	50	5	M5378
CoexpressionAtlas	FacebaseRNAseq_e9.5_Mandibular Arch_top-relative-expression-ranked_2500_k-means-cluster#2	EPC2 BPTF UBAP2L MACF1 ZFHX3 CEP128 DHX29 JMJD1C	2.98e-05	564	47	8	Facebase_RNAseq_e9.5_Mandibular Arch_2500_K2
ToppCell	(00)_Basal-(0)_Reference\|(00)_Basal / shred by cell type by condition	TP63 CTAGE15 IRF2BPL CTAGE6 EIF3H	2.69e-06	196	50	5	ba03530a20d7b29902721fd50df8d860557ddefa
ToppCell	TCGA-Peripheral_Nervous_System-Primary_Tumor-Paraganglioma-Paraganglioma-3\|TCGA-Peripheral_Nervous_System / Sample_Type by Project: Shred V9	DLG5 KMT2D USO1 PHC1	1.60e-05	135	50	4	ac20133d4a36f48338b45bffb13e842cb66f83ad
ToppCell	droplet-Skin-nan-18m-Epithelial-stem_cell_of_epidermis\|Skin / Skin_Bladder_Kidney_Mammary_Gland - method, tissue, subtissue, age, lineage, cell ontology and free annotation	FBXO5 TOX3 PHC1 MYBL2	3.52e-05	165	50	4	96f0d8bc9b13e23f757e6bb98cd7dc061a8a9564
ToppCell	renal_cortex_nuclei-Renal_AKI_(acute_kidney_injury)-Endothelial-blood_vessel_endothelial_cell_of_kidney-capillary-immature_endothelial_cell-Cycling_Endothelial_Cell\|Renal_AKI_(acute_kidney_injury) / Celltypes from Cells and Nuclei per compartment and clinical group	FBXO5 TP63 CEP128 MYBL2	3.69e-05	167	50	4	bc132b51dec4e8f1cd2b2cd89f83641976e09292
ToppCell	Mid-temporal_gyrus_(MTG)-Neuronal-Glutamatergic_Excit-Glut_A_(CT)-Glut_CT_L6_FEZF2-Exc_L6_FEZF2_CPZ\|Mid-temporal_gyrus_(MTG) / Sample groups (6 Anatomical region groups), with 5 level hierarchy of cell types	CTAGE9 ZFHX3 CTAGE4 TRIM64C	4.94e-05	180	50	4	a499548391e6833b78f6e920f8e32a755814a9da
ToppCell	COVID-19-lung-Secretory\|lung / Disease (COVID-19 only), tissue and cell type	DSP TP63 TOX3 CNTN3	5.97e-05	189	50	4	84d48e3ed25bebb8bb8074b3a2c5e2e88cff7f25
ToppCell	facs-Brain_Myeloid-Striatum-3m-Myeloid-nan\|Brain_Myeloid / Brain_Non-Myeloid_Brain_Myeloid - method, tissue, subtissue, age, lineage, cell ontology and free annotation	CYFIP1 CLTC MACF1 JMJD1C	5.97e-05	189	50	4	6dd4ec5ce4beb856f0d2d1654e3c4676d1d63736
ToppCell	facs-Brain_Myeloid-Striatum-3m-Myeloid\|Brain_Myeloid / Brain_Non-Myeloid_Brain_Myeloid - method, tissue, subtissue, age, lineage, cell ontology and free annotation	CYFIP1 CLTC MACF1 JMJD1C	5.97e-05	189	50	4	3ae479ec7e00c57127cbe51a398329b10ca9848c
ToppCell	facs-Brain_Myeloid-Striatum-3m-Myeloid-microglial_cell\|Brain_Myeloid / Brain_Non-Myeloid_Brain_Myeloid - method, tissue, subtissue, age, lineage, cell ontology and free annotation	CYFIP1 CLTC MACF1 JMJD1C	5.97e-05	189	50	4	875df61ee48baa5142ba4d2427bdec1c53e5a828
ToppCell	facs-Brain_Myeloid-Striatum-3m\|Brain_Myeloid / Brain_Non-Myeloid_Brain_Myeloid - method, tissue, subtissue, age, lineage, cell ontology and free annotation	CYFIP1 CLTC MACF1 JMJD1C	5.97e-05	189	50	4	97ef5215d841ff366a3e3682cd9bd04100cbfde0
ToppCell	Fetal_brain-fetalBrain_Zhong_nature-GW23-Stem_cells\|GW23 / Sample Type, Dataset, Time_group, and Cell type.	FBXO5 AKAP3 CTAGE4 MYBL2	6.35e-05	192	50	4	1fc95f7e1a71683c8176693c79ee19eabae8b203
ToppCell	human_hepatoblastoma-Tumor_cells\|World / Sample and Cell Type and Tumor Cluster (all cells)	BPTF DSP TOX3 KMT2E	6.35e-05	192	50	4	916fbec1c7ab7969bda711886ac88e877e30c280
ToppCell	Fetal_brain-fetalBrain_Zhong_nature-GW23-Stem_cells-Stem_cells\|GW23 / Sample Type, Dataset, Time_group, and Cell type.	FBXO5 AKAP3 CTAGE4 MYBL2	6.35e-05	192	50	4	378b994d8879512e2769760cfa900aebde90a3e2
ToppCell	facs-Brain_Myeloid-Hippocampus-3m-Myeloid\|Brain_Myeloid / Brain_Non-Myeloid_Brain_Myeloid - method, tissue, subtissue, age, lineage, cell ontology and free annotation	CYFIP1 CLTC MACF1 JMJD1C	6.48e-05	193	50	4	06b65110db974f4ef90d3511ff34428976a52c9c
ToppCell	facs-Brain_Myeloid-Hippocampus-3m-Myeloid-microglial_cell\|Brain_Myeloid / Brain_Non-Myeloid_Brain_Myeloid - method, tissue, subtissue, age, lineage, cell ontology and free annotation	CYFIP1 CLTC MACF1 JMJD1C	6.48e-05	193	50	4	9c16032bc03df8760ae199e8f19fdafa4c3f1827
ToppCell	human_hepatoblastoma\|World / Sample and Cell Type and Tumor Cluster (all cells)	BPTF DSP TOX3 KMT2E	6.48e-05	193	50	4	e6a688bc834f845ff64dae1be64f073eec5091a1
ToppCell	facs-Brain_Myeloid-Hippocampus-3m\|Brain_Myeloid / Brain_Non-Myeloid_Brain_Myeloid - method, tissue, subtissue, age, lineage, cell ontology and free annotation	CYFIP1 CLTC MACF1 JMJD1C	6.48e-05	193	50	4	a4f91bca5eaa985982d33a528f7566ffde154d47
ToppCell	facs-Brain_Myeloid-Hippocampus-3m-Myeloid-nan\|Brain_Myeloid / Brain_Non-Myeloid_Brain_Myeloid - method, tissue, subtissue, age, lineage, cell ontology and free annotation	CYFIP1 CLTC MACF1 JMJD1C	6.48e-05	193	50	4	b39d7feaac4ff8f7409cd3d15e8f3c6391367275
ToppCell	(05)_Secretory-(0)_Reference\|(05)_Secretory / shred by cell type by condition	CTAGE15 IRF2BPL CTAGE6 EIF3H	6.88e-05	196	50	4	7cb79cf122852c971f2d6e8d1e2b26eade891e83
ToppCell	(04)_Interm._basal>secr.-(0)_Reference\|(04)_Interm._basal>secr. / shred by cell type by condition	CTAGE15 IRF2BPL CTAGE6 EIF3H	7.01e-05	197	50	4	452462b372c66e7487de7b9140717954e1d05263
ToppCell	Smart-start-Cell-Wel_seq-Non-neoplastic-Lymphoid-Plasma_B\|Smart-start-Cell-Wel_seq / Platform, Oncotype, Lineage, Cell_class, celltype (level4), mutation group	CTAGE9 DSP TP63 CEP128	7.15e-05	198	50	4	96236fa22545f6f4ff3aa8dc002963db8a3468ce
ToppCell	Smart-start-Cell-Wel_seq-Non-neoplastic-Lymphoid-Plasma_B-Plasma_B-G\|Smart-start-Cell-Wel_seq / Platform, Oncotype, Lineage, Cell_class, celltype (level4), mutation group	CTAGE9 DSP TP63 CEP128	7.15e-05	198	50	4	9e0fdd63069d17430cdc25bf4ffc762afd5e1728
ToppCell	Smart-start-Cell-Wel_seq-Non-neoplastic-Lymphoid-Plasma_B-Plasma_B\|Smart-start-Cell-Wel_seq / Platform, Oncotype, Lineage, Cell_class, celltype (level4), mutation group	CTAGE9 DSP TP63 CEP128	7.15e-05	198	50	4	7eb521af938c2609a85d27e2aa7d4317ad6e1e44
ToppCell	(03)_KRT6B+-(2)_GFP_FOXI1\|(03)_KRT6B+ / shred by cell type by condition	BPTF USP25 EEA1 KMT2E	7.29e-05	199	50	4	c425e7975f492ed5cfcca022248adb627e1d27d4
ToppCell	mild\|World / Cohort 1 (10x PBMC) with disease condition, cell group and cell class	BPTF MACF1 KMT2E JMJD1C	7.44e-05	200	50	4	12f1685ce8f218433068e090c9d839cd5a1910bf
Disease	disease recurrence, colon carcinoma	TP63 CNTN3 MACF1	4.95e-05	51	41	3	EFO_0004952, EFO_1001950
Disease	brain measurement, neuroimaging measurement	HDAC9 BPTF TOX3 MACF1 ZFHX3 GPATCH8	1.05e-04	550	41	6	EFO_0004346, EFO_0004464
Disease	cirrhosis of liver	HDAC9 KLHL8	1.46e-04	13	41	2	EFO_0001422
Disease	fatty acid measurement	BPTF MACF1 KLHL8 CEP128 JMJD1C	3.33e-04	436	41	5	EFO_0005110
Disease	loneliness measurement	HDAC9 BPTF MACF1	6.87e-04	124	41	3	EFO_0007865
Disease	prostate cancer (is_marker_for)	KMT2D EIF3H KMT2E	1.33e-03	156	41	3	DOID:10283 (is_marker_for)

Protein segments in the cluster

Peptide	Gene	Start	Entry
QQLAQLQQKQQSQHS	EPC2	596	Q52LR7
LQQKQQSQHSSQQTH	EPC2	601	Q52LR7
LQHQVSQISKQQSNY	CEP128	326	Q6ZU80
NTSKQQQQKHQYQQR	EIF3H	266	O15372
SQLQTLKQQHQQAVE	CCDC89	231	Q8N998
NSQLQTSHKQLFQQE	CTAGE4	216	Q8IX94
NSQLQTSHKQLFQQE	CTAGE6	216	Q86UF2
NSQLQTSHKQLFQQE	CTAGE8	216	P0CG41
NSQLQTSHKQLFQQE	CTAGE9	216	A4FU28
NSQLQTSHKQLFQQE	CTAGE15	216	A4D2H0
QNNLSQTQQQTQEMK	ANKRD20A4P	696	Q4UJ75
TLQHNNQTRVQTCQN	APEX2	356	Q9UBZ4
LNKLKQQQQQQQQHS	DHX29	496	Q7Z478
QQQQQQQQHSENKRE	DHX29	501	Q7Z478
IQQSSAVQTHQIQNV	BPTF	2601	Q12830
NHNKITQSLQQQLEV	CYFIP1	216	Q7L576
SQAAVPKQNTHQQQQ	JMJD1C	291	Q15652
HQQQQESSINITNIQ	BPIFA3	86	Q9BQP9
SKLQQAAQQHIQQQL	GPATCH8	1321	Q9UKJ3
QQQQQQQLNHVDGSS	IRF2BPL	121	Q9H1B7
QQQHQQIKNRSSISD	KLHL8	21	Q9P2G9
NKRNLIQHNNSTQTD	DLG5	831	Q8TDM6
QKQLSNNNQALSKNH	KMT2E	1401	Q8IZD2
ITNHKQVQQQKLEQQ	MED25	541	Q71SY5
QQQQQQNSSVQHTYL	PRDM10	1021	Q9NQV6
TLQKQQNTCHQQLED	MACF1	3611	Q9UPN3
TIETYRQQQQQQHQH	TP63	431	Q9H3D4
TKQQHQEQQALQQST	EEA1	486	Q15075
HNKENQHVQQTLNST	FBXO5	116	Q9UKT4
NNRNQAAQHSQKQST	DIS3L	841	Q8TF46
ELQKAQQIHSQTSQQ	DSP	831	P15924
QSTLAQLVIQQQHQQ	HDAC9	456	Q9UKV0
SQNNVQVLNTNKTSA	CNTN3	946	Q9P232
AVTQQVSQIQQHKDQ	USO1	686	O60763
QSQAQQSQNDNKTID	SENP7	886	Q9BQF6
NNSLVQLQASHQQQV	MYBL2	341	P10244
NHNLTDTVQNKQLQA	AKAP3	761	O75969
QNHNNKSVNESLNNL	CLTC	1456	Q00610
KQSHQECSTQQTQQK	XIRP2	2501	A4UGR9
HLDSQTQNFQQTQIQ	XIRP2	2686	A4UGR9
QPQQNQTQTHHTTQQ	UBAP2L	881	Q14157
LSKVSNQQSNLAQHQ	ZNF137P	21	P52743
NVLQQSAAQKHQQTF	USP25	6	Q9UHP3
HTATHLQLAQQQQQQ	PHC1	416	P78364
QPASQQHQSQIQSQT	TOX3	551	O15405
QHQSQIQSQTQTQVL	TOX3	556	O15405
GQQQLSQLQQEKHQS	ZNF853	126	P0CG23
NTNSQFIKHQRTQNI	ZNF613	186	Q6PF04
QQTNVTQEEHQKQVQ	TCHHL1	811	Q5QJ38
NQETQNNLNQETSKF	TRIM64C	151	A6NLI5
FNSTTNVKNNQRVHQ	ZNF623	496	O75123
PQQQQNQLSIAQSHS	ZFHX3	1851	Q15911
QQQQQQQHSAVLALS	KMT2D	3606	O14686
QQKLNSHETTITQQS	PDE4DIP	221	Q5VU43