Cluster composition

Functions

CategoryNameIntersectionWithQueryPValueGenesInTermGenesInQueryGenesInTermInQueryID
GeneOntologyCellularComponentchromatin

SOX7 SIN3B DFFB RARA RARB VPS72 PIAS3 CENPC RRP1B SETD5 RBL2 ICE2 SOX17 DDX23 HAT1 HSFY1 CREB3L3 TAF7 KAT6B TASOR

1.18e-0614808420GO:0000785
DomainNop52

RRP1B RRP1

1.90e-052822IPR010301
DomainNop52

RRP1B RRP1

1.90e-052822PF05997
DomainSox7/17/18_central

SOX7 SOX17

5.70e-053822IPR033392
DomainSox17_18_mid

SOX7 SOX17

5.70e-053822PF12067
DomainSox_C

SOX7 SOX17

5.70e-053822IPR021934
DomainSOX_C

SOX7 SOX17

5.70e-053822PS51516
DomainRetinoic_acid_rcpt

RARA RARB

1.14e-044822IPR003078
Domainubiquitin

MIDN SACS OASL

1.15e-0347823PF00240
DomainUBIQUITIN_2

MIDN SACS OASL

1.72e-0354823PS50053
DomainUbiquitin_dom

MIDN SACS OASL

2.12e-0358823IPR000626
DomainPHD

PHF19 KMT2A KAT6B

4.39e-0375823PF00628
DomainZnf_PHD-finger

PHF19 KMT2A KAT6B

5.07e-0379823IPR019787
Pubmed

Chr21 protein-protein interactions: enrichment in proteins involved in intellectual disability, autism, and late-onset Alzheimer's disease.

LIMK1 RARB VPS72 PIAS3 SACS RBL2 SIPA1L1 LRSAM1 SESN3 KIFC3 SMURF2 ADAM22 MTUS2 DYNC1H1 RPL13 RNF111

7.84e-081285851635914814
Pubmed

The primitive endoderm lineage of the mouse blastocyst: sequential transcription factor activation and regulation of differentiation by Sox17.

SOX7 PDGFRA SOX17

2.29e-061185321146513
Pubmed

Congenital diaphragmatic hernia: comparison of animal models and relevance to the human situation.

RARA RARB PDGFRA

3.05e-061285319325248
Pubmed

Mapping of the mouse Rar loci encoding retinoic acid receptors RAR alpha, RAR beta and RAR gamma.

ERBB2 RARA RARB

3.05e-06128538251184
Pubmed

Systematic mapping of genetic interactions for de novo fatty acid synthesis identifies C12orf49 as a regulator of lipid metabolism.

SIN3B INTS6 C1orf115 VPS72 CENPC PDGFRA RBL2 CLVS2 ICE2 KMT2A CCL7 RPL13 BAP1 RPL18

3.91e-061327851432694731
Pubmed

Oct4 cell-autonomously promotes primitive endoderm development in the mouse blastocyst.

SOX7 PDGFRA SOX17

3.96e-061385323747191
Pubmed

SMYD3 Impedes Small Cell Lung Cancer Sensitivity to Alkylation Damage through RNF113A Methylation-Phosphorylation Cross-talk.

C11orf98 CNNM4 INTS6 GZF1 RRP1B RBL2 DDX23 HAT1 RPL13 RPL18

4.61e-06655851035819319
Pubmed

LIM kinase 1 - dependent cofilin 1 pathway and actin dynamics mediate nuclear retinoid receptor function in T lymphocytes.

LIMK1 RARA RARB

5.03e-061485321923909
Pubmed

Recurrent RARB Translocations in Acute Promyelocytic Leukemia Lacking RARA Translocation.

RARA RARB

5.90e-06285229921692
Pubmed

Single molecule recognition between cytochrome C 551 and gold-immobilized azurin by force spectroscopy.

LIMK1 ABCA1

5.90e-06285216192283
Pubmed

Retinoic acid receptors in normal growth and development.

RARA RARB

5.90e-0628521330302
Pubmed

Establishment of endoderm progenitors by SOX transcription factor expression in human embryonic stem cells.

SOX7 SOX17

5.90e-06285218682240
Pubmed

Biological functional annotation of retinoic acid alpha and beta in mouse liver based on genome-wide binding.

RARA RARB

5.90e-06285224833708
Pubmed

CCL7 and CCL21 overexpression in gastric cancer is associated with lymph node metastasis and poor prognosis.

CCL7 CCL21

5.90e-06285222468089
Pubmed

Reexpression of retinoic acid receptor (RAR) gamma or overexpression of RAR alpha or RAR beta in RAR gamma-null F9 cells reveals a partial functional redundancy between the three RAR types.

RARA RARB

5.90e-0628527644503
Pubmed

The PIAS3-Smurf2 sumoylation pathway suppresses breast cancer organoid invasiveness.

PIAS3 SMURF2

5.90e-06285228423498
Pubmed

Compartment-selective sensitivity of cardiovascular morphogenesis to combinations of retinoic acid receptor gene mutations.

RARA RARB

5.90e-0628529168777
Pubmed

Retinoic acid regulates gene expression of retinoic acid receptors alpha, beta and gamma in F9 mouse teratocarcinoma cells.

RARA RARB

5.90e-0628521334013
Pubmed

Purification and crystallization of the heterodimeric complex of RARbeta and RXRalpha ligand-binding domains in the active conformation.

RARA RARB

5.90e-06285215159591
Pubmed

[The significance of expression of isoforms RARa1 and RARa2 in response to medicinal therapy and in evaluation of total survival of patients with primarily detected multiple myeloma].

RARA RARB

5.90e-06285230601638
Pubmed

Association between nuclear expression of retinoic acid receptor alpha and beta and clinicopathological features and prognosis of advanced non-small cell lung cancer.

RARA RARB

5.90e-06285227306217
Pubmed

Anticancer effect of retinoic acid via AP-1 activity repression is mediated by retinoic acid receptor alpha and beta in gastric cancer cells.

RARA RARB

5.90e-06285212009305
Pubmed

HIPPO pathway members restrict SOX2 to the inner cell mass where it promotes ICM fates in the mouse blastocyst.

SOX7 PDGFRA SOX17

1.56e-052085325340657
Pubmed

FBW7 suppresses ovarian cancer development by targeting the N6-methyladenosine binding protein YTHDF2.

DHX16 ERBB2 DNAJC13 RRP1B KMT2A DYNC1H1 RRP1 RPL13 RPL18

1.66e-0560185933658012
Pubmed

E2F mediates cell cycle-dependent transcriptional repression in vivo by recruitment of an HDAC1/mSin3B corepressor complex.

SIN3B RBL2

1.77e-05385211959842
Pubmed

Function of the retinoic acid receptors (RARs) during development (II). Multiple abnormalities at various stages of organogenesis in RAR double mutants.

RARA RARB

1.77e-0538527607068
Pubmed

Function of the retinoic acid receptors (RARs) during development (I). Craniofacial and skeletal abnormalities in RAR double mutants.

RARA RARB

1.77e-0538527607067
Pubmed

Impaired distribution of retinoic acid receptors in the hindgut-tailgut region of murine embryos with anorectal malformations.

RARA RARB

1.77e-05385211172439
Pubmed

Cloning of several genes coding for retinoic acid nuclear receptors in the mouse embryonal carcinoma cell line PCC7-MZ1.

RARA RARB

1.77e-0538528383767
Pubmed

Retinoic acid receptor gamma: specific immunodetection and phosphorylation.

RARA RARB

1.77e-0538521655807
Pubmed

c-Ski, Smurf2, and Arkadia as regulators of TGF-beta signaling: new targets for managing myofibroblast function and cardiac fibrosis.

SMURF2 RNF111

1.77e-05385219898560
Pubmed

Contribution of retinoic acid receptor beta isoforms to the formation of the conotruncal septum of the embryonic heart.

RARA RARB

1.77e-0538529659935
Pubmed

The structure of Sox17 bound to DNA reveals a conserved bending topology but selective protein interaction platforms.

SOX7 SOX17

1.77e-05385219328208
Pubmed

Inhibition of histone deacetylase activity by trichostatin A modulates gene expression during mouse embryogenesis without apparent toxicity.

RARA RARB

1.77e-05385211245412
Pubmed

mRNA expression pattern of retinoic acid and retinoid X nuclear receptor subtypes in human thyroid papillary carcinoma.

RARA RARB

1.77e-05385223969901
Pubmed

Altered expression of retinoic acid (RA) receptor mRNAs in the fetal mouse secondary palate by all-trans and 13-cis RAs: implications for RA-induced teratogenesis.

RARA RARB

1.77e-05385210100049
Pubmed

Retinoic acid receptor-beta: immunodetection and phosphorylation on tyrosine residues.

RARA RARB

1.77e-0538521283441
Pubmed

Synergistic activation of RARβ and RARγ nuclear receptors restores cell specialization during stem cell differentiation by hijacking RARα-controlled programs.

RARA RARB

1.77e-05385236446525
Pubmed

Characterization of the interaction between retinoic acid receptor/retinoid X receptor (RAR/RXR) heterodimers and transcriptional coactivators through structural and fluorescence anisotropy studies.

RARA RARB

1.77e-05385215528208
Pubmed

Chromosomal assignment of retinoic acid receptor (RAR) genes in the human, mouse, and rat genomes.

RARA RARB

1.77e-0538521655630
Pubmed

Immunolocalization of retinoic acid receptors in rat, mouse and human ovary and uterus.

RARA RARB

1.77e-0538528136307
Pubmed

Retinoic acid and mouse skin morphogenesis. I. Expression pattern of retinoic acid receptor genes during hair vibrissa follicle, plantar, and nasal gland development.

RARA RARB

1.77e-0538528027572
Pubmed

Cloning of murine alpha and beta retinoic acid receptors and a novel receptor gamma predominantly expressed in skin.

RARA RARB

1.77e-0538522544807
Pubmed

[Genetic expression and morphogenesis of the skin in vertebrates].

RARA RARB

1.77e-0538528099268
Pubmed

Characterization of retinoic acid receptor-deficient keratinocytes.

RARA RARB

1.77e-05385210748128
Pubmed

FTO Plays an Oncogenic Role in Acute Myeloid Leukemia as a N6-Methyladenosine RNA Demethylase.

RARA ASB2

1.77e-05385228017614
Pubmed

Strain difference and mode of inheritance of the susceptibility to passive cutaneous anaphylaxis mediated by allogeneic IgE antibody in the mouse.

RARA RARB

1.77e-0538522737701
Pubmed

Combinatorial knockout of RARα, RARβ, and RARγ completely abrogates transcriptional responses to retinoic acid in murine embryonic stem cells.

RARA RARB

1.77e-05385229848550
Pubmed

Expandable endodermal progenitors: new tools to explore endoderm and its derivatives.

SOX7 SOX17

1.77e-05385218940723
Pubmed

TRAF4 hyperactivates HER2 signaling and contributes to Trastuzumab resistance in HER2-positive breast cancer.

ERBB2 SMURF2

1.77e-05385235864174
Pubmed

A redundant oncogenic potential of the retinoic receptor (RAR) alpha, beta and gamma isoforms in acute promyelocytic leukemia.

RARA RARB

1.77e-05385217252005
Pubmed

Retinoic acid down-regulation of fibronectin and retinoic acid receptor alpha proteins in NIH-3T3 cells. Blocks of this response by ras transformation.

RARA RARB

1.77e-0538528626453
Pubmed

Function of retinoic acid receptor gamma in the mouse.

RARA RARB

1.77e-0538528388780
Pubmed

Retinoids and vertebrate development.

RARA RARB

1.77e-0538527910825
Pubmed

Tissue-specific expression of retinoic acid receptor isoform transcripts in the mouse embryo.

RARA RARB

1.77e-05385210842077
Pubmed

Dll4 Blockade Promotes Angiogenesis in Nonhealing Wounds of Sox7-Deficient Mice.

SOX7 SOX17

1.77e-05385233095124
Pubmed

Both retinoic acid receptors alpha (RARalpha) and gamma (RARgamma) are able to initiate mouse upper-lip skin glandular metaplasia.

RARA RARB

1.77e-0538529699718
Pubmed

Mammalian hexokinase 1: evolutionary conservation and structure to function analysis.

RARA RARB

1.77e-0538521783373
Pubmed

Association of retinoic acid receptor genes with meningomyelocele.

RARA RARB

1.77e-05385221254357
Pubmed

Arg278, but not Lys229 or Lys236, plays an important role in the binding of retinoic acid by retinoic acid receptor gamma.

RARA RARB

1.77e-0538529852056
Pubmed

Differential expression of retinoic acid receptors in normal and malignant esophageal tissues.

RARA RARB

1.77e-05385215255287
Pubmed

Heterochromatic gene repression of the retinoic acid pathway in acute myeloid leukemia.

RARA RARB

1.77e-05385217244680
Pubmed

The molecular and genetic dissection of the retinoid signalling pathway.

RARA RARB

1.77e-0538528276261
Pubmed

Co-active receptor tyrosine kinases mitigate the effect of FGFR inhibitors in FGFR1-amplified lung cancers with low FGFR1 protein expression.

ERBB2 PDGFRA

1.77e-05385226549034
Pubmed

Requirement of retinoic acid receptor isotypes alpha, beta, and gamma during the initial steps of neural differentiation of PCC7 cells.

RARA RARB

1.77e-05385215831518
Pubmed

Genes involved in cell adhesion and signaling: a new repertoire of retinoic acid receptor target genes in mouse embryonic fibroblasts.

RARA RARB

1.77e-05385224357724
Pubmed

Regulation of retinoic acid receptor alpha by protein kinase C in B16 mouse melanoma cells.

RARA RARB

1.77e-05385212000751
Pubmed

Specificity of retinoid receptor gene expression in mouse cervical epithelia.

RARA RARB

1.77e-0538528156902
Pubmed

MED26 regulates the transcription of snRNA genes through the recruitment of little elongation complex.

ICE2 TAF7

1.77e-05385225575120
Pubmed

Immunohistochemical localization of the retinoic Acid receptors in human prostate.

RARA RARB

1.77e-05385212399530
Pubmed

Cyp26b1 is an essential regulator of distal airway epithelial differentiation during lung development.

RARA RARB PDGFRA SOX17

2.01e-056585432001436
Pubmed

Association of peroxisome proliferator-activated receptors/retinoic acid receptors with renal diseases.

RARA RARB

3.53e-05485224050824
Pubmed

Synergistic activation of retinoic acid (RA)-responsive genes and induction of embryonal carcinoma cell differentiation by an RA receptor alpha (RAR alpha)-, RAR beta-, or RAR gamma-selective ligand in combination with a retinoid X receptor-specific ligand.

RARA RARB

3.53e-0548528524212
Pubmed

An innate immunity signaling process suppresses macrophage ABCA1 expression through IRAK-1-mediated downregulation of retinoic acid receptor alpha and NFATc2.

ABCA1 RARA

3.53e-05485219752193
Pubmed

Stromal retinoic acid receptor beta promotes mammary gland tumorigenesis.

ERBB2 RARB

3.53e-05485221187396
Pubmed

Biosynthesis and function of all-trans- and 9-cis-retinoic acid in parathyroid cells.

RARA RARB

3.53e-0548529005841
Pubmed

Redundant roles of Sox17 and Sox18 in early cardiovascular development of mouse embryos.

SOX7 SOX17

3.53e-05485217610846
Pubmed

Physiological and retinoid-induced proliferations of epidermis basal keratinocytes are differently controlled.

RARA RARB

3.53e-05485212093741
Pubmed

The retinoid receptors.

RARA RARB

3.53e-0548527967725
Pubmed

Identification of a retinoid receptor response element in the human aldehyde dehydrogenase-2 promoter.

RARA RARB

3.53e-05485214691372
Pubmed

The retinoic acid receptors RARalpha and RARgamma are required for inner ear development.

RARA RARB

3.53e-05485212464434
Pubmed

Limited specificity and large overlap of the functions of the mouse RAR gamma 1 and RAR gamma 2 isoforms.

RARA RARB

3.53e-0548529376317
Pubmed

SoxF factors induce Notch1 expression via direct transcriptional regulation during early arterial development.

SOX7 SOX17

3.53e-05485228619820
Pubmed

Differential expression of genes encoding alpha, beta and gamma retinoic acid receptors and CRABP in the developing limbs of the mouse.

RARA RARB

3.53e-0548522556642
Pubmed

Retinoic acid signalling in the development of branchial arches.

RARA RARB

3.53e-05485215380252
Pubmed

Dimerization with retinoid X receptors and phosphorylation modulate the retinoic acid-induced degradation of retinoic acid receptors alpha and gamma through the ubiquitin-proteasome pathway.

RARA RARB

3.53e-05485210869350
Pubmed

HACE1: A novel repressor of RAR transcriptional activity.

RARA RARB

3.53e-05485219350571
Pubmed

Roles of retinoic acid receptors and of Hox genes in the patterning of the teeth and of the jaw skeleton.

RARA RARB

3.53e-0548527626396
Pubmed

Immunolocalization of enzymes, binding proteins, and receptors sufficient for retinoic acid synthesis and signaling during the hair cycle.

RARA RARB

3.53e-05485217363914
Pubmed

Nuclear GRP75 binds retinoic acid receptors to promote neuronal differentiation of neuroblastoma.

RARA RARB

3.53e-05485222022577
Pubmed

Genetic factors for ischemic and hemorrhagic stroke in Japanese individuals.

LIMK1 ABCA1

3.53e-05485218566305
Pubmed

Specific and redundant functions of retinoid X Receptor/Retinoic acid receptor heterodimers in differentiation, proliferation, and apoptosis of F9 embryonal carcinoma cells.

RARA RARB

3.53e-0548529348290
Pubmed

SOX7 and SOX17 regulate the parietal endoderm-specific enhancer activity of mouse laminin alpha1 gene.

SOX7 SOX17

3.53e-05485215220343
Pubmed

ECSASB2 mediates MLL degradation during hematopoietic differentiation.

KMT2A ASB2

3.53e-05485222174154
Pubmed

CCR7-dependent cortex-to-medulla migration of positively selected thymocytes is essential for establishing central tolerance.

CCL7 CCL21

3.53e-05485216473829
Pubmed

Sox7 promotes high-grade glioma by increasing VEGFR2-mediated vascular abnormality.

SOX7 SOX17

3.53e-05485229444818
Pubmed

Retinoic acid regulates the human methionine sulfoxide reductase A (MSRA) gene via two distinct promoters.

RARA RARB

3.53e-05485218845237
Pubmed

Poly (ADP-ribose) glycohydrolase regulates retinoic acid receptor-mediated gene expression.

RARA RARB

3.53e-05485223102699
Pubmed

The STUbL RNF4 regulates protein group SUMOylation by targeting the SUMO conjugation machinery.

DNAJC13 GZF1 PIAS3 CENPC RRP1B ZDHHC5 HAT1 KIRREL1 RRP1 RPL13 RNF111 RPL18

3.56e-051203851229180619
Pubmed

Quantitative analysis of HSP90-client interactions reveals principles of substrate recognition.

ERBB2 LIMK1 LRSAM1 DAPK3 ASB2 RPS6KL1 RNF111

3.65e-0537285722939624
GeneFamilyZinc fingers ZZ-type|Lysine acetyltransferases

HAT1 KAT6B

1.11e-0317532486
GeneFamilySRY-boxes

SOX7 SOX17

1.40e-0319532757
GeneFamilyPHD finger proteins

PHF19 KMT2A KAT6B

2.33e-039053388
ToppCellHealthy/Control-CD4+_T_naive|World / Disease group and Cell class

TRABD2A SESN3 CACNA1I RPS6KL1 RPL13 RPL18

1.90e-061938566218e6cbe44d92bb98d42ef2f5e18ab7a683b100
ToppCellCOVID_non-vent-Lymphocytic-T_cell-CD4+_Naive_T_cell|COVID_non-vent / Disease condition, Lineage, Cell class and subclass

TRABD2A RBL2 SESN3 KMT2A RPL13 RPL18

2.14e-06197856836dd8110d5689f944ad1d301def38c32278b5b5
ToppCellLPS-antiTNF-Epithelial_alveolar-Mes-Like-AT1_Progenitor|LPS-antiTNF / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2

SOX17 LINGO3 CCL21 RPL13 RPL18

4.19e-06125855b1a12400f7070bdf09e87974c548a8b82e92b65e
ToppCell368C-Myeloid-Macrophage-FABP4+_Macrophage|Macrophage / Donor, Lineage, Cell class and subclass (all cells)

SOX7 FUT10 CFAP54 RARA ECM2

8.94e-061468555b2608b56204dda9a773988f42ff00a9fa743a39
ToppCellCiliated_cells-A-IPF_02|World / lung cells shred on cell class, cell subclass, sample id

CFAP54 CFAP43 LGSN HYDIN CFAP46

1.05e-051518559d03ce73af15ef40c592d19b36aff46bebc14c40
ToppCellLPS_only-Epithelial_airway-Ciliated_cells-Ciliated|LPS_only / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2

SLC9A4 CFAP54 CFAP43 HYDIN CFAP46

1.16e-051548559ca71d440c4f87781e6525b8141e7d8d470b6a8e
ToppCellLPS_only-Epithelial_airway-Ciliated_cells|LPS_only / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2

SLC9A4 CFAP54 CFAP43 HYDIN CFAP46

1.16e-0515485558072ce422d09f2de602580325eaac6c4ec6c136
ToppCellLPS-IL1RA+antiTNF-Epithelial_airway-Ciliated_cells|LPS-IL1RA+antiTNF / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2

SLC9A4 CFAP54 CFAP43 HYDIN CFAP46

1.19e-051558555f1e2195a6b831e1b636f5cc3a282ca423721822
ToppCellLPS-IL1RA+antiTNF-Epithelial_airway-Ciliated_cells-Ciliated|LPS-IL1RA+antiTNF / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2

SLC9A4 CFAP54 CFAP43 HYDIN CFAP46

1.19e-051558550944429459f642a1bcc56edc1ec28aaecde3e2dc
ToppCellLPS-IL1RA+antiTNF-Epithelial_airway|LPS-IL1RA+antiTNF / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2

SLC9A4 CDH26 CFAP54 CFAP43 CFAP46

1.57e-05164855e4d4c59aebe5cacd4ecdb907facd044dc82a831d
ToppCellPCW_07-8.5-Epithelial-Epithelial_ciliated-epi_ciliated_(14)|PCW_07-8.5 / Celltypes from embryonic and fetal-stage human lung

CFAP54 CFAP43 LGSN HYDIN CFAP46

1.62e-051658550c714e852f912b5749de4cb0895406673979b2e6
ToppCellPCW_07-8.5-Epithelial-Epithelial_ciliated|PCW_07-8.5 / Celltypes from embryonic and fetal-stage human lung

CFAP54 CFAP43 LGSN HYDIN CFAP46

1.62e-0516585582530f96aaefe28a13bad0474bbad043f127a86c
ToppCellVE-CD4-proli_CD4|VE / Condition, Cell_class and T cell subcluster

TRABD2A SESN3 CACNA1I RPL13 RPL18

2.33e-05178855f0a0cbf73e03f1b29f0be6598517c8a1da41c8dc
ToppCellrenal_cortex_nuclei-Adult_normal_reference-Epithelial-Intermediate_tubule_epithelial_cell-kidney_loop_of_Henle_thin_descending_limb_epithelial_cell|Adult_normal_reference / Celltypes from Cells and Nuclei per compartment and clinical group

CFAP54 SESN3 KIRREL1 CFAP43 HYDIN

2.52e-051818556a6bd8e020cb0929b6ecdcb55d467ad24fecfaf0
ToppCellFetal_29-31_weeks-Epithelial-ciliated_cell-D088|Fetal_29-31_weeks / Lineage, Cell type, age group and donor

CFAP54 CFAP43 LGSN HYDIN CFAP46

2.52e-05181855dfce05bd472f67e6e2bb60ebd6fd34f0a9aeeca6
ToppCellControl-Epithelial_cells-Airway_ciliated|Control / group, cell type (main and fine annotations)

CFAP54 AADACL2 CFAP43 HYDIN CFAP46

2.59e-05182855fb725d10d9ed25dfc6d5bb69cfef78513f7d3e8f
ToppCell(4)_Endothelial_cells-(40)_EC-arterial|World / Cell class and subclass of bone marrow stroma cells in homeostatis

SOX7 C1orf115 SOX17 CCL21 RPS6KL1

2.73e-051848557e1a2971321ddcfa00d78d3e3ba7960e532f9392
ToppCellPBMC_fresh-frozen-Severe-critical_progression_d03-09-Lymphocytic-Lymphocytic_T-mature_alpha-beta_T_cell-T_CD4_c01-LEF1|Severe-critical_progression_d03-09 / Compartment, severity and other cell annotations on 10x 3' data (130k)

TRABD2A RBL2 SESN3 KMT2A CACNA1I

2.73e-051848555350b58aa9979631228835d11eb45ddf81d08bff
ToppCellCOPD-Epithelial-Ciliated|COPD / Disease state, Lineage and Cell class

CFAP54 AADACL2 CFAP43 HYDIN CFAP46

2.95e-05187855f0fd0792f6926f705d175f6e6fd480f12c7a3bd4
ToppCellControl-Epithelial-Ciliated|Control / Disease state, Lineage and Cell class

CFAP54 AADACL2 CFAP43 HYDIN CFAP46

3.10e-05189855c007fccd08728db3ea99af9da91d67b9b16dabb3
ToppCellCOPD-Epithelial-Ciliated|Epithelial / Disease state, Lineage and Cell class

CFAP54 AADACL2 CFAP43 HYDIN CFAP46

3.10e-051898553e77883db34722b9ce0a03ea74caefc92dc7feff
ToppCelldroplet-Lung-21m-Endothelial-lymphatic_endothelial-lymphatic_endothelial_cell-lymphatic_endothelial_cell|21m / method, tissue, age, lineage, sublineage, cell ontologies, cell type and subtype

DENND2A RARB ECM2 CREB3L3 CCL21

3.18e-05190855f50b9814a1beac67dc042a8c27dfd085ceeda3a6
ToppCelldroplet-Lung-21m-Endothelial-lymphatic_endothelial-lymphatic_endothelial_cell|21m / method, tissue, age, lineage, sublineage, cell ontologies, cell type and subtype

DENND2A RARB ECM2 CREB3L3 CCL21

3.18e-05190855a22a510b4a257eb0eaf09c7ae7978d3d2f07a58c
ToppCelldroplet-Lung-21m-Endothelial-lymphatic_endothelial|21m / method, tissue, age, lineage, sublineage, cell ontologies, cell type and subtype

DENND2A RARB ECM2 CREB3L3 CCL21

3.18e-0519085557c136bf6d7feafb4a220877bed0cc8fdf314db2
ToppCellnucseq-Epithelial-Epithelial_Airway-Ciliated/Deuterosomal-Ciliated|nucseq / Celltype signatures by Technology, Lineage, Lineage_subclass, Celltype_group, Cell_type2

CFAP54 AADACL2 CFAP43 HYDIN CFAP46

3.26e-05191855e417bf491f8b8d7838a61f7f4f6b1740ba97aa3f
ToppCellnucseq-Epithelial-Epithelial_Airway-Ciliated/Deuterosomal|nucseq / Celltype signatures by Technology, Lineage, Lineage_subclass, Celltype_group, Cell_type2

CFAP54 AADACL2 CFAP43 HYDIN CFAP46

3.26e-051918559d31c8424d35bdc0c27188b68bfd0f731af3600b
ToppCellPBMC_fresh-frozen-Mild-Moderate_convalescent_d36-51-Lymphocytic-Lymphocytic_T-mature_alpha-beta_T_cell-T_CD4_c01-LEF1|Mild-Moderate_convalescent_d36-51 / Compartment, severity and other cell annotations on 10x 3' data (130k)

TRABD2A SESN3 CACNA1I RPL13 RPL18

3.26e-05191855fda432a7f79664e8ffd5d03c1c69ec43bbac994b
ToppCellnucseq-Epithelial-Epithelial_Airway|nucseq / Celltype signatures by Technology, Lineage, Lineage_subclass, Celltype_group, Cell_type2

CFAP54 AADACL2 CFAP43 HYDIN CFAP46

3.26e-051918551c528f72c9ef3ef3a850b05e4a9715190832270c
ToppCell(210)_NKT_cell|World / immune cells in Peripheral Blood (logTPM normalization)

FUT10 ERBB2 RBL2 KIFC3 SMURF2

3.34e-0519285508dc0c019c594da7b9944db8fd706aa7780e6ae9
ToppCell(21)_NKT_cell|World / immune cells in Peripheral Blood (logTPM normalization)

FUT10 ERBB2 RBL2 KIFC3 SMURF2

3.34e-05192855b0a573ddde2978485a857b8261ee1ee5ef68ecef
ToppCellIPF-Epithelial-Ciliated|World / Disease state, Lineage and Cell class

CFAP54 AADACL2 CFAP43 HYDIN CFAP46

3.34e-05192855d903bbd6c18e29e2c4cdedeb3fea1fd5ad7baa11
ToppCellCOPD-Epithelial-Ciliated|World / Disease state, Lineage and Cell class

CFAP54 AADACL2 CFAP43 HYDIN CFAP46

3.34e-05192855eab1105cd1a98cfcd3d74dc5c9b89e1799bba59e
ToppCellIPF-Epithelial-Ciliated|IPF / Disease state, Lineage and Cell class

CFAP54 AADACL2 CFAP43 HYDIN CFAP46

3.34e-05192855354adc1354bf596fbc60dd45c0169688e6f45165
ToppCellCOVID-19_Convalescent-CD4+_T_naive|COVID-19_Convalescent / Disease condition and Cell class

TRABD2A ABCA1 SESN3 RPL13 RPL18

3.42e-05193855346caaf288217acaf232060629ce964a07f63432
ToppCellControl-Epithelial-Ciliated|Epithelial / Disease state, Lineage and Cell class

CFAP54 AADACL2 CFAP43 HYDIN CFAP46

3.42e-051938550e37d454f3735edd936ee9a5f5f516ac3aad400e
ToppCellHealthy/Control-CD4+_T_naive|Healthy/Control / Disease group and Cell class

TRABD2A SESN3 RPS6KL1 RPL13 RPL18

3.42e-05193855f5face746df3517c86d72e31ba8f1b78c4c6b481
ToppCell10x_3'_v3-tissue-resident_(10x_3'_v3)-lymphocytic-T_lymphocytic-CD4-positive_helper_T_cell|tissue-resident_(10x_3'_v3) / Per Platform+tissue_group, by lineage_subgroup, cell_group, cell_type

TRABD2A SESN3 CACNA1I RPL13 RPL18

3.42e-05193855792315f409a57fa6a8a88c850060b1e089e062ea
ToppCellControl-Epithelial-Ciliated|World / Disease state, Lineage and Cell class

CFAP54 AADACL2 CFAP43 HYDIN CFAP46

3.51e-05194855958e648138676d46698090b4046cb484083ae449
ToppCell10x_3'_v3-blood_(10x_3'_v3)-lymphocytic-T_lymphocytic-naive_thymus-derived_CD4-positive,_alpha-beta_T_cell|blood_(10x_3'_v3) / Per Platform+tissue_group, by lineage_subgroup, cell_group, cell_type

TRABD2A SESN3 CACNA1I RPL13 RPL18

3.60e-051958554e114f6399863406bd87220dea7fb7dfd08824bd
ToppCellIPF-Multiplet-Multiplet|World / Disease state, Lineage and Cell class

CFAP54 AADACL2 CFAP43 HYDIN CFAP46

3.60e-0519585521dbdc803c6947024dc2416e9e21c2ef0af9bc31
ToppCellTCGA-Prostate-Primary_Tumor-Prostate_Adenocarcinoma-Acinar_Adenocarcinoma-4|TCGA-Prostate / Sample_Type by Project: Shred V9

SOX7 RARA PHF19 KIRREL1 KIFC3

3.60e-051958555562665dd3beb70e2358aa32611a337bef5731c1
ToppCellIPF-Epithelial|IPF / Disease state, Lineage and Cell class

CFAP54 AADACL2 CFAP43 HYDIN CFAP46

3.69e-0519685587d9881cfec461a5d89b688a83749b618c519485
ToppCell3'-Parenchyma_lung-Epithelial-Airway_ciliated-ciliated_columnar_cell_of_tracheobronchial_tree-Multiciliated_(non-nasal)-Multiciliated_(non-nasal)_L.0.3.2.2|3' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5

CFAP54 CFAP43 LGSN HYDIN CFAP46

3.78e-0519785574a2c6cb8fcfe53dd9a2b36492a16c58f38e51c9
ToppCellhealthy_donor-Lymphocytic-T_cell-CD4+_Naive_T_cell|healthy_donor / Disease condition, Lineage, Cell class and subclass

TRABD2A SESN3 CACNA1I RPL13 RPL18

3.78e-05197855cf72160f03105876641fa6fdc7405e339eb084c7
ToppCellhealthy_donor-Lymphocytic-T_cell|healthy_donor / Disease condition, Lineage, Cell class and subclass

TRABD2A RBL2 KMT2A RPL13 RPL18

3.78e-0519785563d0f06e150e7eb800ecb70e97b9d12a01c84e37
ToppCellCOVID_vent-Lymphocytic|COVID_vent / Disease condition, Lineage, Cell class and subclass

TRABD2A RBL2 KMT2A RPL13 RPL18

3.87e-05198855ee80f647317377081b4bd194ee2801f556b3a53b
ToppCellCOVID_vent-Lymphocytic-T_cell-CD4+_Memory_T_cell|COVID_vent / Disease condition, Lineage, Cell class and subclass

TRABD2A RBL2 SESN3 KMT2A RPL13

3.87e-0519885558f208b76cb0adcecdf632d92f92833a06f9bf71
ToppCellCaecum-T_cell-Tcm|T_cell / Region, Cell class and subclass

TRABD2A C1orf115 SESN3 RPL13 RPL18

3.87e-05198855f889ee80c641540fd8db9eaefcd16aa51ddb2c01
ToppCellLPS_only-Epithelial_airway-airway_epithelial|LPS_only / Treatment groups by lineage, cell group, cell type

SLC9A4 CDH26 CFAP54 KIFC3 HYDIN

3.87e-05198855e035380578c01b0243bfef29ca9b50cc17cce771
ToppCellLPS_only-Epithelial_airway|LPS_only / Treatment groups by lineage, cell group, cell type

SLC9A4 CDH26 CFAP54 KIFC3 HYDIN

3.87e-05198855ba090210392e001a3f7bdf09371b3f0e0c8c7ef3
ToppCellBronchial-NucSeq-Epithelial-Epi_airway_ciliated|NucSeq / Cell types per location group and 10X technology with lineage, and cell group designations

CFAP54 AADACL2 CFAP43 HYDIN CFAP46

3.96e-051998552498237b9e895ca4826a3378d9d40989968df72b
ToppCellBronchial-NucSeq-Epithelial-Epi_airway_ciliated-Ciliated|NucSeq / Cell types per location group and 10X technology with lineage, and cell group designations

CFAP54 AADACL2 CFAP43 HYDIN CFAP46

3.96e-05199855542ec45c931b40738df1f3777b00c83be33a514a
ToppCellCOVID_vent-Lymphocytic-T_cell-CD4+_Naive_T_cell|COVID_vent / Disease condition, Lineage, Cell class and subclass

TRABD2A RBL2 SESN3 RPL13 RPL18

3.96e-05199855885bc902b6e2af0b61e452c4154160cd3f1cf98e
ToppCell356C-Lymphocytic-CD8+_Cytotoxic_T-cell-CD8+_Cytotoxic_T_cell_0|356C / Donor, Lineage, Cell class and subclass (all cells)

SOX7 CFAP54 RBL2 CDH18

8.52e-051218544ec70ad316942d9ade7bbdbf0e117e7c52b59d90
ToppCellSubstantia_nigra-Endothelial-ENDOTHELIAL_STALK-Flt1_1|Substantia_nigra / BrainAtlas - Mouse McCarroll V32

SOX7 C1orf115 OASL SOX17

1.19e-0413285406e7337de35bd7120655a22b6020604ad004c4e1
ToppCellThalamus-Endothelial-ENDOTHELIAL_STALK-Flt1_2|Thalamus / BrainAtlas - Mouse McCarroll V32

SOX7 SLC9A4 SOX17 TOR4A

1.23e-0413385429b0c2c682c6b97823e7d8d8ba1f5114044b30ba
ToppCellFrontal_cortex-Endothelial-ENDOTHELIAL_STALK-Flt1_1|Frontal_cortex / BrainAtlas - Mouse McCarroll V32

SOX7 CDH26 OASL SOX17

1.23e-04133854bc29a2faa151b0e48c1c7e3f016cccc49f9a15eb
ToppCellStriatum-Endothelial-ENDOTHELIAL_STALK-Flt1_1|Striatum / BrainAtlas - Mouse McCarroll V32

SOX7 CDH26 OASL SOX17

1.38e-04137854306b11b3b9e5fd562d845fb5eaa4ac982864efce
ToppCellStriatum-Endothelial-ENDOTHELIAL_STALK|Striatum / BrainAtlas - Mouse McCarroll V32

SOX7 CDH26 OASL SOX17

1.38e-04137854d37f425b13bc046baa1f8619b98a16b936f88ff6
ToppCellGlobus_pallidus-Endothelial-ENDOTHELIAL_STALK-Flt1_1|Globus_pallidus / BrainAtlas - Mouse McCarroll V32

SOX7 C1orf115 OASL SOX17

1.67e-041448541c118b22c2ff3a526a5207d6c9d772636ee065fd
ToppCell15-Trachea-Immune-Immune|Trachea / Age, Tissue, Lineage and Cell class

TRABD2A OASL CREB3L3 ASB2

1.76e-04146854ca722a89c6601e78f253d9484d01931f26161820
ToppCellLPS-antiTNF-Epithelial_airway-Ciliated_cells-Ciliated|LPS-antiTNF / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2

CFAP54 CFAP43 HYDIN CFAP46

1.85e-04148854d61123f0c811287843d066b932b4a9ff09c07c5b
ToppCellLPS-antiTNF-Epithelial_airway-Ciliated_cells|LPS-antiTNF / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2

CFAP54 CFAP43 HYDIN CFAP46

1.85e-04148854c8e93b87212f55774223caa385859c566fa1981f
ToppCellGlobus_pallidus-Endothelial-ENDOTHELIAL_STALK|Globus_pallidus / BrainAtlas - Mouse McCarroll V32

SOX7 C1orf115 OASL SOX17

1.90e-04149854d9c47f523c75ddcd6131e45d2ffc24b970932cae
ToppCellsaliva-Severe-critical_progression_d12-22_no-steroids-Lymphocytic-Lymphocytic_B|Severe-critical_progression_d12-22_no-steroids / Compartment, severity and other cell annotations on 10x 3' data (130k)

ZNF436-AS1 CENPC KMT2A ASB2

1.90e-0414985414d2e8cab97108d8fa94e540c1957b73ed32dc73
ToppCellsaliva-Severe-critical_progression_d12-22_no-steroids-Lymphocytic-Lymphocytic_B-B_cell|Severe-critical_progression_d12-22_no-steroids / Compartment, severity and other cell annotations on 10x 3' data (130k)

ZNF436-AS1 CENPC KMT2A ASB2

1.90e-0414985454c9c6282f5f5de43dfaf2972fab3e3dcf9838a3
ToppCell356C-Lymphocytic-CD8+_Cytotoxic_T-cell-CD8+_Cytotoxic_T_cell_0|Lymphocytic / Donor, Lineage, Cell class and subclass (all cells)

SOX7 CFAP54 RBL2 CDH18

1.95e-04150854b6f1fc62d08199fed6156c7cd32f66d9926531b5
ToppCellCOVID-19-Epithelial_cells-Airway_mucous|COVID-19 / group, cell type (main and fine annotations)

CFAP54 CFAP43 HYDIN CFAP46

2.00e-041518548216462e723fec2797387929dde095370947e10a
ToppCellControl-Epithelial_airway-Ciliated_cells-Ciliated|Control / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2

CFAP54 CFAP43 HYDIN CFAP46

2.15e-041548544e3bc24043144143842627cacf6f90dda2228910
ToppCellControl-Epithelial_airway-Ciliated_cells|Control / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2

CFAP54 CFAP43 HYDIN CFAP46

2.15e-041548547556a4b2b062da5ae7ec2bbb66e745e7662db628
ToppCellPosterior_cortex-Neuronal-Excitatory-eN2(Slc17a7_Slc17a6)-Syt6-Excitatory_Neuron.Slc17a7.Syt6-Nnat_(Neuron.Slc17a7.Syt6-Nnat)|Posterior_cortex / BrainAtlas - Mouse McCarroll V32

KPNA7 SLC9A4 ANGPTL3

2.27e-0462853dd2e222d454fb78fed8b37901cbf04c0080ed010
ToppCellPosterior_cortex-Neuronal-Excitatory-eN2(Slc17a7_Slc17a6)-Syt6-Excitatory_Neuron.Slc17a7.Syt6-Nnat_(Neuron.Slc17a7.Syt6-Nnat)-|Posterior_cortex / BrainAtlas - Mouse McCarroll V32

KPNA7 SLC9A4 ANGPTL3

2.27e-04628536a3f990e8d59392ad909634a239b3ab4f13d8855
ToppCellfacs-Marrow-T-cells-24m-Lymphocytic-pre_B_cell|Marrow / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation

SOX7 PDGFRA CCL7 CREB3L3

2.38e-04158854f296ca24fdedc33f1d24b79e7660763114ce7fa3
ToppCellfacs-Marrow-T-cells-24m-Lymphocytic-precursor_B_cell|Marrow / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation

SOX7 PDGFRA CCL7 CREB3L3

2.38e-041588548c7108f2c40d97a317762ba0b8eca76542b2ebaf
ToppCellCOVID-CD4-CD4_Treg|COVID / Condition, Cell_class and T cell subcluster

C11orf98 CNNM4 SYCP2 PSD4

2.43e-04159854037cd97c41eb2f91fd3f69bbb3ffdfd6c0158410
ToppCell10x5'v1-week_17-19-Lymphocytic_B-B_lineage-pro_B_progenitor|week_17-19 / cell types per 3 fetal stages;per 3',per 5'

SOX7 ZNF436-AS1 ECM2 TAF7

2.49e-0416085430b7f24e0c3ecfa618b4e31678e18c8a4405a8d7
ToppCellfacs-Brain_Non-Myeloid-Hippocampus-24m-Macroglial-astrocyte|Brain_Non-Myeloid / Brain_Non-Myeloid_Brain_Myeloid - method, tissue, subtissue, age, lineage, cell ontology and free annotation

ERBB2 LIMK1 RRP1B CDH18

2.55e-041618549f02b94e29e60d50e92eaa748ebf0c36d3671bb3
ToppCellfacs-Marrow-T-cells-24m-Lymphocytic-mature_alpha-beta_T_cell|Marrow / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation

CFAP54 CCL7 ASB2 RPL13

2.61e-04162854b5b2cdbcc5bbfab52cc7d8a5504d34bb2e73771a
ToppCellfacs-Marrow-T-cells-24m-Lymphocytic-BM_CD8_+_CD4_T_cell|Marrow / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation

CFAP54 CCL7 ASB2 RPL13

2.61e-041628544f9cf67b4b00b1cf78eeb9be1c701d535021a61d
ToppCellCiliated_cells-B-Donor_03|World / lung cells shred on cell class, cell subclass, sample id

CFAP54 CFAP43 HYDIN CFAP46

2.74e-04164854fd30c55d0d75ef8b9396435d836187168095152b
ToppCellLPS_only-Epithelial_airway|LPS_only / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2

SLC9A4 CDH26 MFSD6L CFAP43

2.74e-0416485456e6934e6c7503a300d7be06762d45a1d6f1ae0f
ToppCellE18.5-Immune-Immune_Lymphocytic_T/NK-Lymphocytic_ILC-NK-ILC|E18.5 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif

SACS TOR4A ASB2 PSD4

2.80e-041658540c80abf13409767825ef8a507b498afafa7e89c5
ToppCellE18.5-Immune-Immune_Lymphocytic_T/NK-Lymphocytic_ILC-NK-ILC-ILC_mature|E18.5 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif

SACS TOR4A ASB2 PSD4

2.80e-04165854cced77f2d74b07010307d7f4788b8cf3fdaeb91a
ToppCell10x3'2.3-week_17-19-Hematopoietic-HSC/MPP_and_pro-MPP_myeloid|week_17-19 / cell types per 3 fetal stages;per 3',per 5'

CDH26 ADAM22 RPL13 RPL18

2.80e-04165854dc70e050465d1f05bb4115356dc978aa581149b5
ToppCellfacs-Lung-Endomucin-24m-Lymphocytic-B_cell|Lung / Lung_Trachea - method, tissue, subtissue, age, lineage, cell ontology and free annotation

CACNA1I CCL7 RPL13 RPL18

2.93e-041678544520ee71e2b119c1dfa0e342fe57eda5f3598650
ToppCellsaliva-Severe-critical_progression_d28-40-Lymphocytic-Lymphocytic_B-B_cell-B_c01-TCL1A|Severe-critical_progression_d28-40 / Compartment, severity and other cell annotations on 10x 3' data (130k)

PIAS3 AADACL2 HYDIN CFAP46

3.00e-041688549a8709d34865cfa668d8f3335dc34fc86fc32482
ToppCell368C-Lymphocytic-CD8+_Cytotoxic_T-cell-CD8+_Cytotoxic_T_cell_1.5|Lymphocytic / Donor, Lineage, Cell class and subclass (all cells)

FUT10 RBL2 LRSAM1 RPS6KL1

3.00e-0416885494cded2e953c0970bf2f3dbe0ce46bd77a5ed8c7
ToppCell367C-Lymphocytic-CD8+_Cytotoxic_T-cell-CD8+_Cytotoxic_T_cell_0|CD8+_Cytotoxic_T-cell / Donor, Lineage, Cell class and subclass (all cells)

RRP1B LRSAM1 SOX17 RPS6KL1

3.00e-041688542fb2d916eb5000a637240d38e47a9b4f61f9f83f
ToppCell5'-Parenchyma_lung-Epithelial-Airway_ciliated-ciliated_columnar_cell_of_tracheobronchial_tree-Multiciliated_(non-nasal)-Multiciliated_(non-nasal)_L.0.3.2.2|5' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5

CFAP54 CFAP43 HYDIN CFAP46

3.07e-04169854fba841664939c771881ba97f14ef1df6635c04ff
ToppCell3'-Broncho-tracheal-Epithelial-Airway_ciliated-ciliated_columnar_cell_of_tracheobronchial_tree-Multiciliated_(non-nasal)-Multiciliated_(non-nasal)_L.0.3.0.2|3' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5

CFAP54 CFAP43 HYDIN CFAP46

3.07e-0416985414aadc2d1bf66eb47dac33b4d61ddb3c942caa4f
ToppCellfacs-Diaphragm-Limb_Muscle-24m|Diaphragm / Tongue_Heart_Limb_Muscle_Aorta_Diaphragm - method, tissue, subtissue, age, lineage, cell ontology and free annotation

CCL7 HYDIN RPL13 RPL18

3.07e-0416985412bdc709bc000d7f9061ecd9fbd57233eaacb7e2
ToppCellBrain_organoid-organoid_Kanton_Nature-Organoid-1M-Proliferating-cycling_ventral_progenitors|Organoid-1M / Sample Type, Dataset, Time_group, and Cell type.

SLC9A4 PHF19 HAT1 LGSN

3.14e-0417085473601c873b177d5d134618d8e228c51381119f7d
ToppCellsystemic_lupus_erythematosus-treated-Hematopoietic-Progen-female|systemic_lupus_erythematosus / PBMC cell types (v2) per disease, treatment status, and sex

TRABD2A RBL2 CFAP43 RPL13

3.21e-0417185461d622153b91702ef21b0efc7b9581e592b7ccea
ToppCellTCGA-Brain-Primary_Tumor-Low_Grade_Glioma-Astrocytoma-10|TCGA-Brain / Sample_Type by Project: Shred V9

CFAP54 ECM2 CFAP43 PSD4

3.21e-0417185474be8d3bf6b99e2d734635a8b1a7c41e8c596959
ToppCellsystemic_lupus_erythematosus-treated-Hematopoietic-Progen|systemic_lupus_erythematosus / PBMC cell types (v2) per disease, treatment status, and sex

TRABD2A RBL2 CFAP43 RPL13

3.21e-0417185409b3fa120f63c411f8a0dd6bd230a9720ce83fb1
ToppCellE12.5-Endothelial-proliferative_endothelial_cell-proliferative_endothelial_cell|E12.5 / developmental_time, Lineage, Cell group, Cell type, Cell type_cellcyc-phase

SOX7 C1orf115 CDH26 SOX17

3.28e-04172854ba99688e9f46671deccf824b1e77c6db0742d7df
ToppCellE12.5-Endothelial-proliferative_endothelial_cell|E12.5 / developmental_time, Lineage, Cell group, Cell type, Cell type_cellcyc-phase

SOX7 C1orf115 CDH26 SOX17

3.28e-041728542136170f6e1204734cec7dbf7b32e7d5179b92b5
ToppCell3'-Parenchyma_lung-Epithelial-Airway_ciliated-ciliated_columnar_cell_of_tracheobronchial_tree-Multiciliated_(non-nasal)-|3' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5

LINGO3 LGSN MTUS2 CFAP46

3.28e-0417285473e9b29b1c6b8b016b495a0d20336d0c0761e5e2
ToppCellfacs-Diaphragm-Limb_Muscle-24m-Mesenchymal|Diaphragm / Tongue_Heart_Limb_Muscle_Aorta_Diaphragm - method, tissue, subtissue, age, lineage, cell ontology and free annotation

CCL7 HYDIN RPL13 RPL18

3.35e-0417385466f37c1437705734b20601656fa4aa1d92ca30be
ToppCellfacs-Diaphragm-Limb_Muscle-24m-Mesenchymal-nan|Diaphragm / Tongue_Heart_Limb_Muscle_Aorta_Diaphragm - method, tissue, subtissue, age, lineage, cell ontology and free annotation

CCL7 HYDIN RPL13 RPL18

3.35e-04173854649b08a409095592cccf31883be69c754411280d
DrugMonobenzone [103-16-2]; Up 200; 20uM; MCF7; HT_HG-U133A

CNNM4 RARA RRP1B OASL C1orf159 KAT6B ADAM22

7.17e-061978275312_UP
DrugUVI 3003

ABCA1 RARA RARB

7.28e-0611823ctd:C525131
DrugCefaclor [70356-03-5]; Down 200; 10.4uM; MCF7; HT_HG-U133A

DFFB ABCA1 C1orf115 RARA DAPK3 C1orf159 PSD4

7.41e-061988274967_DN
DrugRo 8-8717

RARA RARB

1.28e-052822CID006438148
DrugTamibarotene

RARA RARB

1.28e-052822DB04942
Drug4-(1H-imidazol-1-yl)retinoic acid

ERBB2 RARA RARB

3.53e-0518823ctd:C496751
DrugVigabatrin [60643-86-9]; Up 200; 31uM; HL60; HT_HG-U133A

ERBB2 ABCA1 SYCP2 RARA SIPA1L1 OASL

3.96e-051748262452_UP
Druggenistein; Up 200; 10uM; HL60; HT_HG-U133A

ABCA1 SIPA1L1 OASL C1orf159 CCL21 ADAM22

6.27e-051898262695_UP
DrugFenoterol hydrobromide [1944-12-3]; Down 200; 10.4uM; MCF7; HT_HG-U133A

DFFB RARA OASL DAPK3 C1orf159 PSD4

7.04e-051938265432_DN
DrugBromocryptine mesylate [22260-51-1]; Up 200; 5.4uM; MCF7; HT_HG-U133A

RARA PDGFRA ECM2 OASL CACNA1I ADAM22

7.45e-051958265665_UP
DrugHemicholinium bromide [312-45-8]; Down 200; 7uM; PC3; HT_HG-U133A

CNNM4 DENND2A RARA KIRREL1 CACNA1I BAP1

7.45e-051958266739_DN
Drugradicicol, diheterospora chlamydosporia; Down 200; 0.1uM; MCF7; HT_HG-U133A

LIMK1 RARA OASL DAPK3 C1orf159 RRP1

7.45e-051958265579_DN
DrugAC1L32JQ

ERBB2 RARA RARB

7.57e-0523823CID000133319
Drugsporostatin

ERBB2 PDGFRA

7.65e-054822CID006444393
DrugSRI 5898-21

RARA RARB

7.65e-054822CID006439757
DrugTazarotene

RARA RARB

7.65e-054822DB00799
DrugNomegestrol acetate [58652-20-3]; Down 200; 10.8uM; MCF7; HT_HG-U133A

RARA OASL DAPK3 ADAM22 RPL18 PSD4

7.67e-051968265461_DN
DrugSulpiride [15676-16-1]; Down 200; 11.8uM; HL60; HG-U133A

RARA OASL KAT6B TASOR BAP1 RPL18

7.67e-051968261967_DN
DrugCanavanine sulfate monohydrate (L,+) [206996-57-8]; Down 200; 13.6uM; HL60; HT_HG-U133A

SYCP2 RARA SIPA1L1 OASL RPL13 PSD4

7.89e-051978262141_DN
DrugQuipazine dimaleate salt [4774-24-7]; Down 200; 9uM; MCF7; HT_HG-U133A

DFFB RARA KMT2A DAPK3 KAT6B ADAM22

7.89e-051978262782_DN
DrugThioridazine hydrochloride [130-61-0]; Down 200; 9.8uM; MCF7; HT_HG-U133A

DFFB SYCP2 RARA TOR4A ADAM22 PSD4

7.89e-051978264164_DN
DrugSulfamethizole [144-82-1]; Down 200; 14.8uM; MCF7; HT_HG-U133A

RARA KMT2A DAPK3 CACNA1I ADAM22 RPL18

7.89e-051978266099_DN
DrugAlclometasone dipropionate [667634-13-2]; Down 200; 7.6uM; MCF7; HT_HG-U133A

DFFB LIMK1 DAPK3 CACNA1I ADAM22 PSD4

7.89e-051978266094_DN
DrugFlecainide acetate [54143-56-5]; Down 200; 8.4uM; MCF7; HT_HG-U133A

DFFB ABCA1 SIPA1L1 TOR4A ADAM22 RPL13

8.11e-051988263843_DN
Drug0317956-0000 [391210-11-0]; Up 200; 10uM; MCF7; HT_HG-U133A

DENND2A ABCA1 PDGFRA TOR4A ADAM22 CDH18

8.34e-051998263966_UP
DrugFolinic acid calcium salt [6035-45-6]; Up 200; 7.8uM; HL60; HT_HG-U133A

ERBB2 ABCA1 RARB RRP1B DAPK3 RPL13

8.34e-051998262579_UP
DrugTobramycin [32986-56-4]; Up 200; 8.6uM; HL60; HT_HG-U133A

CNNM4 ERBB2 LIMK1 SIPA1L1 CACNA1I CCL7

8.57e-052008262481_UP
DrugAC1L45LU

ERBB2 CENPC PDGFRA HAT1 KMT2A SMURF2

9.82e-05205826CID000151069
DiseaseNeuralgia-Neuritis, Sciatic Nerve

RARA RARB

4.90e-054852C0751924
DiseaseSciatic Nerve Palsy

RARA RARB

4.90e-054852C0751925
DiseaseLesion of Sciatic Nerve

RARA RARB

4.90e-054852C0154748
DiseaseSciatic Neuritis

RARA RARB

4.90e-054852C0242013
DiseaseSciatic Neuropathy

RARA RARB

4.90e-054852C0149940
DiseaseHead and Neck Neoplasms

ERBB2 RARB BAP1

1.18e-0433853C0018671
DiseaseHereditary Diffuse Gastric Cancer

ERBB2 RARB KMT2A RPL13 BAP1 RPL18

2.06e-04293856C1708349
DiseaseStomach Neoplasms

ERBB2 RARB KMT2A RPL13 BAP1 RPL18

2.22e-04297856C0038356
Diseasepantothenate measurement

DFFB ABCA1

2.27e-048852EFO_0021034
DiseaseCornelia De Lange Syndrome

SETD5 KMT2A

2.27e-048852C0270972
DiseaseMalignant neoplasm of stomach

ERBB2 RARB KMT2A RPL13 BAP1 RPL18

2.34e-04300856C0024623
DiseaseMalignant Head and Neck Neoplasm

ERBB2 RARB BAP1

2.81e-0444853C0278996
DiseaseC-C motif chemokine 21 measurement

DNAJC13 CCL21

3.64e-0410852EFO_0008048
Diseasecongenital diaphragmatic hernia (implicated_via_orthology)

SOX7 PDGFRA

5.31e-0412852DOID:3827 (implicated_via_orthology)
DiseaseC-C motif chemokine 19 measurement

DNAJC13 CCL21

7.30e-0414852EFO_0008047
DiseasePrecursor B-cell lymphoblastic leukemia

PDGFRA KMT2A

1.66e-0321852C1292769
DiseaseNasopharyngeal carcinoma

ERBB2 BAP1

1.82e-0322852C2931822
DiseaseIntrahepatic Cholangiocarcinoma

ERBB2 BAP1

2.17e-0324852C0345905
DiseaseHead Neoplasms

RARB BAP1

2.17e-0324852C0018675
DiseaseUpper Aerodigestive Tract Neoplasms

RARB BAP1

2.17e-0324852C0887900
DiseaseExtrahepatic Cholangiocarcinoma

ERBB2 BAP1

2.17e-0324852C3805278
DiseaseCancer of Head

RARB BAP1

2.17e-0324852C0751177
Diseasecreatinine measurement

SLC9A4 DNAJC13 RARB VPS72 ZNF436-AS1 ICE2 DAPK3 RPL13 PSD4

2.26e-03995859EFO_0004518
DiseaseNeck Neoplasms

RARB BAP1

2.36e-0325852C0027533
DiseaseCancer of Neck

RARB BAP1

2.36e-0325852C0746787
DiseaseAntiglaucoma preparations and miotics use measurement

ABCA1 KMT2A

2.55e-0326852EFO_0009944
DiseaseCholangiocarcinoma

ERBB2 BAP1

2.55e-0326852C0206698

Protein segments in the cluster

PeptideGeneStartEntry
YEKFKETILRIKRRR

ERICH6B

401

Q5W0A0
FGILIKRRQQKIRKY

ERBB2

671

P04626
VRLYLPKRKSETRRR

AADACL2

91

Q6P093
SQRKIPAKVVRSYRK

CCL21

36

O00585
LYKLFKRRPRISKQK

CFAP43

1306

Q8NDM7
RRKNKAVFRPKIRIN

CFAP54

366

Q96N23
LTKYEERVLKKIRRK

CREB3L3

236

Q68CJ9
RLRVRKAIGKYRIKL

ASB2

601

Q96Q27
VFVEIPKKKYTRRLR

GZF1

231

Q9H116
ELTKIYRRKRKPAVD

ABCA1

1916

O95477
LKPRPKRSKRQLRRY

ADAM22

216

Q9P0K1
LYDNVKVKKLRLRRG

CFAP46

606

Q8IYW2
KQRKPDRRKRSRPYK

BAP1

711

Q92560
KYNKPRAKSKPERRR

ANGPTL3

416

Q9Y5C1
QAKPRYRRLILKTQI

ZNF436-AS1

81

Q8NC38
IYKPQTRLKRKQPVR

DFFB

321

O76075
LRKKSRREYLAKRER

DHX16

226

O60231
PSEQPRKRYRRKLKK

C1orf115

86

Q9H7X2
KPKHVRPKIITYIRR

MTUS2

636

Q5JR59
LEALKVYVRKRRPSR

RARA

356

P10276
LEALKIYIRKRRPSK

RARB

356

P10826
RKPGRKYERIFTLLK

INTS6

821

Q9UL03
PFVLKKKRGRKRRRI

KAT6B

1126

Q8WYB5
VYRSVLIKGKRKRRN

RBL2

926

Q08999
QEIRYRSKLKLIRAK

PDGFRA

371

P16234
RRKFKYRGKDVSLRR

KPNA7

11

A9QM74
SPDKLRKVIYRRKKV

KATNBL1

61

Q9H079
KRGYPQLLVRVKRRI

HSFY1

181

Q96LI6
RKRKPSEEARKRLEY

LRSAM1

6

Q6UWE0
IQRRLPRERKIKYSK

MFSD6L

541

Q8IWD5
KPERRRLKTTRLKEY

DAPK3

291

O43293
YFVCRKPKIRERRLQ

LINGO3

401

P0C6S8
KERYLGGIKKRRRTR

DDX23

251

Q9BUQ8
IRKVKEKIRRTRGYS

OASL

376

Q15646
YLRQKLRAELKPKTR

HYDIN

1751

Q4G0P3
RSKKRKKIRRQFPVY

ICE2

756

Q659A1
KRRLISPYKKKQRDL

HAT1

356

O14929
YEVRRGKKRVKRLSQ

DENND2A

491

Q9ULE3
NVRRTKRTRLKPLEY

CENPC

736

Q03188
RYLVPLQSKNKLRKR

FUT10

196

Q6P4F1
RLEKKRRKAQRLPYY

CACNA1I

1456

Q9P0X4
KPVVLRKRRQRIKIE

DNAJC13

741

O75165
PRKQRRKIYHRRLRK

ECM2

26

O94769
TKEKIYQPLRRSKRR

CDH26

41

Q8IXH8
KYRRDIRPEVKLTPR

CDH18

686

Q13634
KIRNTKYPIQRALRL

DYNC1H1

366

Q14204
YRRRKGSRKDVTLRK

KIRREL1

521

Q96J84
VSNRKRKRKVFSPIR

KMT2A

731

Q03164
KKIPKQRLESYRRTT

CCL7

41

P80098
KSQPVRKPRYVRRER

C1orf159

346

Q96HA4
PESERKKIIRRLYLK

SACS

4321

Q9NZJ4
RLKEYRSKLILFPRK

RPL13

116

P26373
NTLRRTRKKVTKPYV

LGSN

26

Q5TDP6
LRKRLSQRLKVPKER

MIDN

56

Q504T8
ITLPLKNVRKRRFRK

TAF7

136

Q15545
KYRPRRRKQVKRLKR

SOX17

136

Q9H6I2
NYKYRPRRKKQAKRL

SOX7

111

Q9BT81
KGIRDRAVKKLRQYI

RRP1B

21

Q14684
LLRKYRRELQLRKKC

KIFC3

421

Q9BVG8
RGRRKSRFALYKRPK

PELI2

36

Q9HAT8
RNISERRTYRKIIPK

PSD4

1036

Q8NDX1
HRYLRKILIRKNLPK

SLC9A4

526

Q6AI14
NLRLFKEREKPLKRR

SIPA1L1

271

O43166
PQRKKVSLLEYRKRK

SETD5

1061

Q9C0A6
KPVFLQRNLKKFRRR

SIN3B

1011

O75182
TPSQNRKRLYKVIRK

RRP1

316

P56182
RKRLYKVIRKLQDLA

RRP1

321

P56182
RRIAQKIIREPRKKR

HERC2P3

271

Q9BVR0
VRRSFQIPRKSREKK

TASOR

96

Q9UK61
RRYARKIEPIRRKGN

CNNM4

226

Q6P4Q7
PRTELKKKLFKRRRV

C11orf98

11

E9PRG8
YTVIRPFLKEKTRKR

CLVS2

211

Q5SYC1
KIKELYRRRFPRKTL

PIAS3

56

Q9Y6X2
PRYKRDLVQKLKILR

SMURF2

366

Q9HAU4
RKVRRKEPKSQDIYL

RPL18

11

Q07020
TRYPTVKQIRKLRQL

MINPP1

91

Q9UNW1
RKKREVLARRKYALL

RNF111

236

Q6ZNA4
RKVLRKDKRIRVSQP

SESN3

21

P58005
RIRLPRKATKTKKNY

SYCP2

1011

Q9BX26
QKRRVYRRKRSKFLL

PHF19

386

Q5T6S3
IYKRNERIGKRVKAL

TRABD2A

301

Q86V40
REAVKLKITKYLRRA

RPS6KL1

96

Q9Y6S9
RKKRRRSRLVLYPET

TOR4A

91

Q9NXH8
RYLGRPKKEKTIVIR

ZDHHC5

251

Q9C0B5
EEPRRKRRVVTKAYK

VPS72

76

Q15906
RSLKKPDRKKRYTVV

LIMK1

496

P53667