Cluster composition

Functions

Category	Name	IntersectionWithQuery	PValue	GenesInTerm	GenesInQuery	GenesInTermInQuery	ID
GeneOntologyMolecularFunction	ATP-dependent activity	DHX16 DNHD1 ABCA2 DYNC2H1 MYO9B CHD9 CHD4 CHD7 DNAH14 ATP8A1 KIF2B CHD5 DNAH17 DHX29 SLC27A3	3.47e-07	614	99	15	GO:0140657
GeneOntologyMolecularFunction	minus-end-directed microtubule motor activity	DNHD1 DYNC2H1 DNAH14 DNAH17	1.65e-06	18	99	4	GO:0008569
GeneOntologyMolecularFunction	dynein light intermediate chain binding	DNHD1 DYNC2H1 DNAH14 DNAH17	1.06e-05	28	99	4	GO:0051959
GeneOntologyMolecularFunction	ATP hydrolysis activity	DHX16 ABCA2 DYNC2H1 MYO9B CHD9 CHD4 CHD7 ATP8A1 KIF2B CHD5 DHX29	1.18e-05	441	99	11	GO:0016887
GeneOntologyMolecularFunction	microtubule motor activity	DNHD1 DYNC2H1 DNAH14 KIF2B DNAH17	2.54e-05	70	99	5	GO:0003777
GeneOntologyMolecularFunction	cytoskeletal motor activity	DNHD1 DYNC2H1 MYO9B DNAH14 KIF2B DNAH17	2.68e-05	118	99	6	GO:0003774
GeneOntologyMolecularFunction	ribonucleoside triphosphate phosphatase activity	DHX16 ABCA2 DYNC2H1 MYO9B CHD9 CHD4 CHD7 ARHGAP35 SEPTIN8 ARHGAP5 ATP8A1 KIF2B CHD5 DHX29	2.79e-05	775	99	14	GO:0017111
GeneOntologyMolecularFunction	dynein intermediate chain binding	DNHD1 DYNC2H1 DNAH14 DNAH17	3.31e-05	37	99	4	GO:0045505
GeneOntologyMolecularFunction	ATP-dependent chromatin remodeler activity	CHD9 CHD4 CHD7 CHD5	3.31e-05	37	99	4	GO:0140658
GeneOntologyMolecularFunction	pyrophosphatase activity	DHX16 ABCA2 DYNC2H1 MYO9B CHD9 CHD4 CHD7 ARHGAP35 SEPTIN8 ARHGAP5 ATP8A1 KIF2B CHD5 DHX29	6.60e-05	839	99	14	GO:0016462
GeneOntologyMolecularFunction	hydrolase activity, acting on acid anhydrides	DHX16 ABCA2 DYNC2H1 MYO9B CHD9 CHD4 CHD7 ARHGAP35 SEPTIN8 ARHGAP5 ATP8A1 KIF2B CHD5 DHX29	6.68e-05	840	99	14	GO:0016817
GeneOntologyMolecularFunction	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	DHX16 ABCA2 DYNC2H1 MYO9B CHD9 CHD4 CHD7 ARHGAP35 SEPTIN8 ARHGAP5 ATP8A1 KIF2B CHD5 DHX29	6.68e-05	840	99	14	GO:0016818
GeneOntologyMolecularFunction	helicase activity	DHX16 CHD9 CHD4 CHD7 CHD5 DHX29	1.36e-04	158	99	6	GO:0004386
GeneOntologyMolecularFunction	GTPase activator activity	MYO9B STXBP5 SIPA1L3 ARHGAP35 TIAM2 ARHGAP5 FAM13A	4.80e-04	279	99	7	GO:0005096
GeneOntologyMolecularFunction	enzyme activator activity	WDR4 MYO9B STXBP5 SIPA1L3 ARHGAP35 TIAM2 TGFBR2 ARHGAP5 FAM13A WDR48	1.54e-03	656	99	10	GO:0008047
GeneOntologyCellularComponent	microtubule associated complex	DNHD1 MAP1A DYNC2H1 DNAH14 KIF2B DNAH17	1.25e-04	161	100	6	GO:0005875
GeneOntologyCellularComponent	dynein complex	DNHD1 DYNC2H1 DNAH14 DNAH17	1.30e-04	54	100	4	GO:0030286
Domain	FRG2	FRG2 FRG2C FRG2B	1.40e-07	3	98	3	PF15315
Domain	FRG2	FRG2 FRG2C FRG2B	1.40e-07	3	98	3	IPR026245
Domain	DNA/RNA_helicase_DEAH_CS	DHX16 CHD4 CHD7 CHD5 DHX29	1.03e-06	35	98	5	IPR002464
Domain	DEAH_ATP_HELICASE	DHX16 CHD4 CHD7 CHD5 DHX29	1.57e-06	38	98	5	PS00690
Domain	P-loop_NTPase	DHX16 DNHD1 ABCA2 NWD1 DYNC2H1 MYO9B CHD9 CHD4 CHD7 ARHGAP35 DNAH14 SEPTIN8 ARHGAP5 KIF2B CHD5 ASPM DHX29	1.81e-06	848	98	17	IPR027417
Domain	Chromo_domain	CHD9 CHD4 CHD7 CHD5	6.99e-06	24	98	4	IPR023780
Domain	Chromo	CHD9 CHD4 CHD7 CHD5	9.75e-06	26	98	4	PF00385
Domain	CHROMO_1	CHD9 CHD4 CHD7 CHD5	1.32e-05	28	98	4	PS00598
Domain	CHROMO_2	CHD9 CHD4 CHD7 CHD5	1.32e-05	28	98	4	PS50013
Domain	Helicase_C	DHX16 CHD9 CHD4 CHD7 CHD5 DHX29	2.11e-05	107	98	6	PF00271
Domain	HELICc	DHX16 CHD9 CHD4 CHD7 CHD5 DHX29	2.11e-05	107	98	6	SM00490
Domain	Helicase_C	DHX16 CHD9 CHD4 CHD7 CHD5 DHX29	2.22e-05	108	98	6	IPR001650
Domain	SNF2_N	CHD9 CHD4 CHD7 CHD5	2.29e-05	32	98	4	IPR000330
Domain	SNF2_N	CHD9 CHD4 CHD7 CHD5	2.29e-05	32	98	4	PF00176
Domain	Chromodomain-like	CHD9 CHD4 CHD7 CHD5	2.29e-05	32	98	4	IPR016197
Domain	HELICASE_CTER	DHX16 CHD9 CHD4 CHD7 CHD5 DHX29	2.34e-05	109	98	6	PS51194
Domain	HELICASE_ATP_BIND_1	DHX16 CHD9 CHD4 CHD7 CHD5 DHX29	2.34e-05	109	98	6	PS51192
Domain	DEXDc	DHX16 CHD9 CHD4 CHD7 CHD5 DHX29	2.34e-05	109	98	6	SM00487
Domain	Helicase_ATP-bd	DHX16 CHD9 CHD4 CHD7 CHD5 DHX29	2.47e-05	110	98	6	IPR014001
Domain	Chromo/shadow_dom	CHD9 CHD4 CHD7 CHD5	2.59e-05	33	98	4	IPR000953
Domain	CHROMO	CHD9 CHD4 CHD7 CHD5	2.59e-05	33	98	4	SM00298
Domain	RhoGAP-FF1	ARHGAP35 ARHGAP5	2.73e-05	2	98	2	PF16512
Domain	RhoGAP-FF1	ARHGAP35 ARHGAP5	2.73e-05	2	98	2	IPR032835
Domain	-	DHX16 DNHD1 ABCA2 NWD1 DYNC2H1 CHD9 CHD4 CHD7 ARHGAP35 DNAH14 SEPTIN8 ARHGAP5 CHD5 DHX29	3.39e-05	746	98	14	3.40.50.300
Domain	Dynein_HC_stalk	DNHD1 DYNC2H1 DNAH14	4.89e-05	14	98	3	IPR024743
Domain	MT	DNHD1 DYNC2H1 DNAH14	4.89e-05	14	98	3	PF12777
Domain	DHC_fam	DNHD1 DYNC2H1 DNAH14	6.09e-05	15	98	3	IPR026983
Domain	Dynein_heavy	DNHD1 DYNC2H1 DNAH14	6.09e-05	15	98	3	PF03028
Domain	Dynein_heavy_dom	DNHD1 DYNC2H1 DNAH14	6.09e-05	15	98	3	IPR004273
Domain	-	SEMA4B NWD1 WDR4 STXBP5 TULP4 PAN2 PAK1IP1 TAF5 WDR48	6.39e-05	333	98	9	2.130.10.10
Domain	WD40/YVTN_repeat-like_dom	SEMA4B NWD1 WDR4 STXBP5 TULP4 PAN2 PAK1IP1 TAF5 WDR48	6.69e-05	335	98	9	IPR015943
Domain	DNA_pol_A	POLG POLN	8.15e-05	3	98	2	PF00476
Domain	CHD_N	CHD4 CHD5	8.15e-05	3	98	2	IPR012958
Domain	CHD_C2	CHD4 CHD5	8.15e-05	3	98	2	IPR012957
Domain	DNA-dir_DNA_pol_A_palm_dom	POLG POLN	8.15e-05	3	98	2	IPR001098
Domain	DNA_POLYMERASE_A	POLG POLN	8.15e-05	3	98	2	PS00447
Domain	CHDCT2	CHD4 CHD5	8.15e-05	3	98	2	PF08074
Domain	CHDNT	CHD4 CHD5	8.15e-05	3	98	2	PF08073
Domain	DUF1086	CHD4 CHD5	8.15e-05	3	98	2	IPR009462
Domain	DUF1087	CHD4 CHD5	8.15e-05	3	98	2	IPR009463
Domain	DUF1087	CHD4 CHD5	8.15e-05	3	98	2	PF06465
Domain	DUF1086	CHD4 CHD5	8.15e-05	3	98	2	PF06461
Domain	DUF1087	CHD4 CHD5	8.15e-05	3	98	2	SM01147
Domain	DUF1086	CHD4 CHD5	8.15e-05	3	98	2	SM01146
Domain	POLAc	POLG POLN	8.15e-05	3	98	2	SM00482
Domain	WD40_repeat_dom	NWD1 WDR4 STXBP5 TULP4 PAN2 PAK1IP1 TAF5 WDR48	1.70e-04	297	98	8	IPR017986
Domain	RhoGAP	MYO9B ARHGAP35 ARHGAP5 FAM13A	3.15e-04	62	98	4	SM00324
Domain	RhoGAP	MYO9B ARHGAP35 ARHGAP5 FAM13A	3.35e-04	63	98	4	PF00620
Domain	RhoGAP_dom	MYO9B ARHGAP35 ARHGAP5 FAM13A	3.56e-04	64	98	4	IPR000198
Domain	RHOGAP	MYO9B ARHGAP35 ARHGAP5 FAM13A	3.56e-04	64	98	4	PS50238
Domain	-	MYO9B ARHGAP35 ARHGAP5 FAM13A	3.56e-04	64	98	4	1.10.555.10
Domain	BRK	CHD9 CHD7	4.03e-04	6	98	2	SM00592
Domain	FF_domain	ARHGAP35 ARHGAP5	4.03e-04	6	98	2	IPR002713
Domain	BRK_domain	CHD9 CHD7	4.03e-04	6	98	2	IPR006576
Domain	FF	ARHGAP35 ARHGAP5	4.03e-04	6	98	2	PS51676
Domain	FF	ARHGAP35 ARHGAP5	4.03e-04	6	98	2	PF01846
Domain	FF	ARHGAP35 ARHGAP5	4.03e-04	6	98	2	SM00441
Domain	BRK	CHD9 CHD7	4.03e-04	6	98	2	PF07533
Domain	WD40	NWD1 WDR4 STXBP5 TULP4 PAK1IP1 TAF5 WDR48	4.30e-04	259	98	7	PF00400
Domain	WD40	NWD1 WDR4 STXBP5 TULP4 PAK1IP1 TAF5 WDR48	5.27e-04	268	98	7	SM00320
Domain	WD40_repeat	NWD1 WDR4 STXBP5 TULP4 PAK1IP1 TAF5 WDR48	5.76e-04	272	98	7	IPR001680
Domain	WD_REPEATS_1	NWD1 WDR4 STXBP5 TULP4 PAK1IP1 TAF5 WDR48	6.55e-04	278	98	7	PS00678
Domain	WD_REPEATS_2	NWD1 WDR4 STXBP5 TULP4 PAK1IP1 TAF5 WDR48	6.69e-04	279	98	7	PS50082
Domain	WD_REPEATS_REGION	NWD1 WDR4 STXBP5 TULP4 PAK1IP1 TAF5 WDR48	6.69e-04	279	98	7	PS50294
Domain	Ig-like_fold	IL11RA SEMA4B CEACAM5 TRIM45 PTPRM IGHD PXDNL IGHG4 TNN VCAN ROBO1	1.18e-03	706	98	11	IPR013783
Domain	Rho_GTPase_activation_prot	MYO9B ARHGAP35 ARHGAP5 FAM13A	1.19e-03	88	98	4	IPR008936
Domain	WD40_repeat_CS	NWD1 STXBP5 PAK1IP1 TAF5 WDR48	1.73e-03	164	98	5	IPR019775
Domain	-	POLG PAN2 POLN	1.92e-03	47	98	3	3.30.420.10
Domain	Dynein_heavy_chain_D4_dom	DYNC2H1 DNAH14	2.38e-03	14	98	2	IPR024317
Domain	Dynein_heavy_dom-2	DNHD1 DYNC2H1	2.38e-03	14	98	2	IPR013602
Domain	DHC_N2	DNHD1 DYNC2H1	2.38e-03	14	98	2	PF08393
Domain	AAA_8	DYNC2H1 DNAH14	2.38e-03	14	98	2	PF12780
Domain	DUF1605	DHX16 DHX29	3.52e-03	17	98	2	IPR011709
Domain	OB_NTP_bind	DHX16 DHX29	3.52e-03	17	98	2	PF07717
Domain	HA2	DHX16 DHX29	3.95e-03	18	98	2	SM00847
Domain	HA2	DHX16 DHX29	3.95e-03	18	98	2	PF04408
Domain	Helicase-assoc_dom	DHX16 DHX29	3.95e-03	18	98	2	IPR007502
Domain	IG_LIKE	IL11RA CEACAM5 PTPRM IGHD PXDNL IGHG4 VCAN ROBO1	4.30e-03	491	98	8	PS50835
Domain	Ig-like_dom	IL11RA CEACAM5 PTPRM IGHD PXDNL IGHG4 VCAN ROBO1	4.96e-03	503	98	8	IPR007110
Pubmed	A dual-activity topoisomerase complex regulates mRNA translation and turnover.	SEMA4B CRYBG2 FRAS1 ABCA2 GBF1 KMT2B MYO9B POLG SIPA1L3 ARHGAP35 PTCH1 TIAM2 PNPLA6 TULP4 CHD5 CEP131 SMURF2 MED12	2.94e-09	1105	101	18	35748872
Pubmed	Prediction of the coding sequences of mouse homologues of KIAA gene: IV. The complete nucleotide sequences of 500 mouse KIAA-homologous cDNAs identified by screening of terminal sequences of cDNA clones randomly sampled from size-fractionated libraries.	SEMA4B GBF1 DYNC2H1 PPFIA4 SIPA1L3 GNPTAB ARHGAP35 TULP4 SUN2 SOCS5 DNAH17 MED12	2.19e-08	493	101	12	15368895
Pubmed	FRG2, an FSHD candidate gene, is transcriptionally upregulated in differentiating primary myoblast cultures of FSHD patients.	FRG2 FRG2C FRG2B	2.38e-08	3	101	3	15520407
Pubmed	Construction of expression-ready cDNA clones for KIAA genes: manual curation of 330 KIAA cDNA clones.	GBF1 SIPA1L3 GNPTAB CHD7 ARHGAP35 NRXN1 CHD5 WDR48	3.27e-07	225	101	8	12168954
Pubmed	Mammalian APE1 controls miRNA processing and its interactome is linked to cancer RNA metabolism.	DHX16 POLG CHD9 CHD4 POMT1 DNAH14 NARF SEPTIN8 CEP131 DMBT1 CTSD DHX29 WWC1	2.89e-06	925	101	13	28986522
Pubmed	MED12 controls the response to multiple cancer drugs through regulation of TGF-β receptor signaling.	TGFBR2 MED12	8.35e-06	2	101	2	23178117
Pubmed	The novel mechanism of Med12-mediated drug resistance in a TGFBR2-independent manner.	TGFBR2 MED12	8.35e-06	2	101	2	35461070
Pubmed	Association of the CAG repeat polymorphism in mitochondrial polymerase gamma (POLG1) with male infertility: a case-control study in an Algerian population.	POLG MED12	8.35e-06	2	101	2	34077112
Pubmed	RhoA is down-regulated at cell-cell contacts via p190RhoGAP-B in response to tensional homeostasis.	ARHGAP35 ARHGAP5	8.35e-06	2	101	2	23552690
Pubmed	The p190 RhoGAPs, ARHGAP35, and ARHGAP5 are implicated in GnRH neuronal development: Evidence from patients with idiopathic hypogonadotropic hypogonadism, zebrafish, and in vitro GAP activity assay.	ARHGAP35 ARHGAP5	8.35e-06	2	101	2	36178483
Pubmed	Human plasma N-glycoproteome analysis by immunoaffinity subtraction, hydrazide chemistry, and mass spectrometry.	SEMA4B LAMP2 PTPRM IGHD TNN C1S CTSD	1.06e-05	257	101	7	16335952
Pubmed	MECP2 directly interacts with RNA polymerase II to modulate transcription in human neurons.	DHX16 MAP1A CHD9 CHD4 CHD7 ARHGAP35 VANGL2 NRXN1 SUN2 VCAN PAN2 PAK1IP1 MED12	1.54e-05	1082	101	13	38697112
Pubmed	Large-scale characterization of HeLa cell nuclear phosphoproteins.	DHX16 KDM3A GBF1 KMT2B CHD4 CHD7 ARHGAP35 PNPLA6 FAM13A PAK1IP1 DHX29	1.60e-05	774	101	11	15302935
Pubmed	Distribution of lysosome-associated membrane proteins-1 and -2, and cathepsin D in eosinophilic granular bodies: possible relationship to cyst development in pilocytic astrocytomas.	LAMP2 CTSD	2.50e-05	3	101	2	20926008
Pubmed	Genomic analysis of human chromosome 10q and 4q telomeres suggests a common origin.	FRG2 FRG2B	2.50e-05	3	101	2	11829491
Pubmed	Functional characterization of the lysosomal membrane protein TMEM192 in mice.	LAMP2 CTSD	2.50e-05	3	101	2	28504966
Pubmed	Immunohistochemical profiling of receptor tyrosine kinases, MED12, and TGF-βRII of surgically resected small cell lung cancer, and the potential of c-kit as a prognostic marker.	TGFBR2 MED12	2.50e-05	3	101	2	28055980
Pubmed	SMURF2 phosphorylation at Thr249 modifies glioma stemness and tumorigenicity by regulating TGF-β receptor stability.	TGFBR2 SMURF2	2.50e-05	3	101	2	35017630
Pubmed	Dysregulation of mannose-6-phosphate-dependent cholesterol homeostasis in acinar cells mediates pancreatitis.	GNPTAB LAMP2	2.50e-05	3	101	2	34128834
Pubmed	Requirement of Smurf-mediated endocytosis of Patched1 in sonic hedgehog signal reception.	PTCH1 SMURF2	2.50e-05	3	101	2	24925320
Pubmed	Myo9b is a key player in SLIT/ROBO-mediated lung tumor suppression.	MYO9B ROBO1	2.50e-05	3	101	2	26529257
Pubmed	Interactomes of Glycogen Synthase Kinase-3 Isoforms.	MAP1A SIPA1L3 ARHGAP35 ROBO1 CEP131 WWC1	3.46e-05	209	101	6	36779422
Pubmed	Fucoidan inhibition of lung cancer in vivo and in vitro : role of the Smurf2-dependent ubiquitin proteasome pathway in TGFβ receptor degradation.	TGFBR2 SMURF2	4.99e-05	4	101	2	25149540
Pubmed	P190A RhoGAP is required for mammary gland development.	ARHGAP35 ARHGAP5	4.99e-05	4	101	2	21945077
Pubmed	Smad7 binds to Smurf2 to form an E3 ubiquitin ligase that targets the TGF beta receptor for degradation.	TGFBR2 SMURF2	4.99e-05	4	101	2	11163210
Pubmed	Construction of long-transcript enriched cDNA libraries from submicrogram amounts of total RNAs by a universal PCR amplification method.	SHLD2 ANO9 USP45 POLG CHD7 PTCH1 TIAM2 SEPTIN8 ARHGAP5 VCAN SOCS5 PAN2	7.37e-05	1084	101	12	11544199
Pubmed	Genetic link between renal birth defects and congenital heart disease.	FRAS1 DYNC2H1 ROBO1	7.39e-05	28	101	3	27002738
Pubmed	Developmental hourglass and heterochronic shifts in fin and limb development.	PTCH1 VCAN	8.30e-05	5	101	2	33560225
Pubmed	Susceptible genes and molecular pathways related to heavy ion irradiation in oral squamous cell carcinoma cells.	TGFBR2 SMURF2	8.30e-05	5	101	2	18514338
Pubmed	Genomic characterization of the lysophosphatidic acid receptor gene, lp(A2)/Edg4, and identification of a frameshift mutation in a previously characterized cDNA.	NPY1R MYO9B	8.30e-05	5	101	2	10729222
Pubmed	HIV-1 Tat alters neuronal autophagy by modulating autophagosome fusion to the lysosome: implications for HIV-associated neurocognitive disorders.	LAMP2 CTSD	8.30e-05	5	101	2	25653352
Pubmed	Chr21 protein-protein interactions: enrichment in proteins involved in intellectual disability, autism, and late-onset Alzheimer's disease.	KDM3A ABCA2 WDR4 POLG SIPA1L3 GNPTAB CHD9 CHD4 ARHGAP5 OSBPL1A ROBO1 C1S SMURF2	9.00e-05	1285	101	13	35914814
Pubmed	Prediction of the coding sequences of mouse homologues of KIAA gene: I. The complete nucleotide sequences of 100 mouse KIAA-homologous cDNAs identified by screening of terminal sequences of cDNA clones randomly sampled from size-fractionated libraries.	KMT2B CHD9 SEPTIN8 NRXN1	1.24e-04	87	101	4	12465718
Pubmed	Organization of the constant-region gene family of the mouse immunoglobulin heavy chain.	IGHD IGHG4	1.24e-04	6	101	2	6804095
Pubmed	Defining the membrane proteome of NK cells.	GDPD1 KDM3A ABCA2 GBF1 MYO9B CHD4 LMF2 PNPLA6 ATP8A1 CHD5 MED12 SLC27A3	1.48e-04	1168	101	12	19946888
Pubmed	Altered heparan sulfate structure in mice with deleted NDST3 gene function.	LAMP2 PTCH1	1.74e-04	7	101	2	18385133
Pubmed	Transforming Growth Factor-Beta and Sonic Hedgehog Signaling in Palatal Epithelium Regulate Tenascin-C Expression in Palatal Mesenchyme During Soft Palate Development.	TGFBR2 TNN	1.74e-04	7	101	2	32581832
Pubmed	Biosynthetic processing of cathepsins and lysosomal degradation are abolished in asparaginyl endopeptidase-deficient mice.	LAMP2 CTSD	1.74e-04	7	101	2	12775715
Pubmed	Genome-Wide Analysis in Brazilians Reveals Highly Differentiated Native American Genome Regions.	KLHL29 ARHGAP5	1.74e-04	7	101	2	28100790
Pubmed	Functional association of TGF-beta receptor II with cyclin B.	PTCH1 TGFBR2	1.74e-04	7	101	2	9926943
Pubmed	ESCPE-1 mediates retrograde endosomal sorting of the SARS-CoV-2 host factor Neuropilin-1.	SEMA4B FRAS1 ABCA2 GNPTAB LAMP2 POMT1 LMF2 SUN2 ROBO1 CTSD CSGALNACT1 SLC27A3	1.92e-04	1201	101	12	35696571
Pubmed	Pervasive translational regulation of the cell signalling circuitry underlies mammalian development.	PTCH1 WWC1	2.31e-04	8	101	2	28195124
Pubmed	Neuropeptide Y receptor genes on human chromosome 4q31-q32 map to conserved linkage groups on mouse chromosomes 3 and 8.	NPY1R MYO9B	2.31e-04	8	101	2	9169155
Pubmed	Proteome-scale mapping of binding sites in the unstructured regions of the human proteome.	GBF1 MAP1A CHD7 PTCH1 TULP4 CHD5 TONSL	2.67e-04	430	101	7	35044719
Pubmed	Paralog knockout profiling identifies DUSP4 and DUSP6 as a digenic dependence in MAPK pathway-driven cancers.	KDM3A SEMA4B CEACAM5 KMT2B ATP8A1 DPP9 DNAH17 TAF5 SMURF2	2.82e-04	730	101	9	34857952
Pubmed	Identification of novel ATP13A2 interactors and their role in α-synuclein misfolding and toxicity.	NPY1R CYGB NRXN1	2.89e-04	44	101	3	22645275
Pubmed	The absence of IgE antibody-mediated augmentation of immune responses in CD23-deficient mice.	IGHD IGHG4	2.97e-04	9	101	2	8041705
Pubmed	Genome-wide CRISPR screens identify novel regulators of wild-type and mutant p53 stability.	MIS18BP1 MAP1A DYNC2H1 MYO9B CHD7 TONSL ASPM CEP131	3.25e-04	588	101	8	38580884
Pubmed	DCHS1, Lix1L, and the Septin Cytoskeleton: Molecular and Developmental Etiology of Mitral Valve Prolapse.	SEPTIN8 VCAN	3.70e-04	10	101	2	35200715
Pubmed	Patched-1 proapoptotic activity is downregulated by modification of K1413 by the E3 ubiquitin-protein ligase Itchy homolog.	PTCH1 SMURF2	3.70e-04	10	101	2	25092867
Pubmed	Conditional deletion of Tgfbr2 in hypertrophic chondrocytes delays terminal chondrocyte differentiation.	PTCH1 TGFBR2	3.70e-04	10	101	2	22885149
Pubmed	Genome-wide CRISPR screen identifies HNRNPL as a prostate cancer dependency regulating RNA splicing.	WDR4 POLG SIPA1L3 CHD9 POMT1 ARHGAP35 DNAH14 KLHL29 PNPLA6 DPP9 FAM13A TULP4 SMURF2	3.79e-04	1489	101	13	28611215
Pubmed	The RNA-mediated estrogen receptor α interactome of hormone-dependent human breast cancer cell nuclei.	CEACAM5 KMT2B SIPA1L3 RBM26 LAMP2 CHD7 PNPLA6 SUN2 CEP131 PAK1IP1 TAF5 DHX29 MED12	3.98e-04	1497	101	13	31527615
Pubmed	Systematic bromodomain protein screens identify homologous recombination and R-loop suppression pathways involved in genome integrity.	MAP1A CHD9 CHD4 VANGL2 PNPLA6 SUN2 CHD5 ASPM TAF5 WWC1 WDR48	4.03e-04	1116	101	11	31753913
Pubmed	The in vivo Interaction Landscape of Histones H3.1 and H3.3.	DHX16 KDM3A MIS18BP1 KMT2B CHD9 CHD4 CHD7 CHD5	4.05e-04	608	101	8	36089195
Pubmed	Maternal genes and facial clefts in offspring: a comprehensive search for genetic associations in two population-based cleft studies from Scandinavia.	FRAS1 CHD7 POMT1 ARHGAP35 PTCH1 TGFBR2	4.22e-04	331	101	6	20634891
Pubmed	Mice lacking mannose 6-phosphate uncovering enzyme activity have a milder phenotype than mice deficient for N-acetylglucosamine-1-phosphotransferase activity.	GNPTAB CTSD	4.51e-04	11	101	2	19710420
Pubmed	Differential requirements of CD45 for lymphocyte development and function.	IGHD IGHG4	4.51e-04	11	101	2	8566034
Pubmed	Versican facilitates chondrocyte differentiation and regulates joint morphogenesis.	TGFBR2 VCAN	4.51e-04	11	101	2	20404343
Pubmed	Missense Mutation in Human CHD4 Causes Ventricular Noncompaction by Repressing ADAMTS1.	CHD4 VCAN	4.51e-04	11	101	2	37254794
Pubmed	The IFT-A complex regulates Shh signaling through cilia structure and membrane protein trafficking.	DYNC2H1 PTCH1	4.51e-04	11	101	2	22689656
Pubmed	Combined genetic-pharmacologic inactivation of tightly linked ADAMTS proteases in temporally specific windows uncovers distinct roles for versican proteolysis and glypican-6 in cardiac development.	PTCH1 VCAN	4.51e-04	11	101	2	38750698
Pubmed	Regulation of TGF-beta signalling by Fbxo11, the gene mutated in the Jeff otitis media mouse mutant.	TGFBR2 SMURF2	5.41e-04	12	101	2	19580641
Pubmed	Neuropeptide Y receptor genes mapped in human and mouse: receptors with high affinity for pancreatic polypeptide are not clustered with receptors specific for neuropeptide Y and peptide YY.	NPY1R MYO9B	5.41e-04	12	101	2	9417917
Pubmed	Liprins, a family of LAR transmembrane protein-tyrosine phosphatase-interacting proteins.	PPFIA4 PTPRM	5.41e-04	12	101	2	9624153
Pubmed	Postnatal lethality and chondrodysplasia in mice lacking both chondroitin sulfate N-acetylgalactosaminyltransferase-1 and -2.	PTCH1 CSGALNACT1	5.41e-04	12	101	2	29287114
Pubmed	Gli2 influences proliferation in the developing lung through regulation of cyclin expression.	PTCH1 VCAN	6.38e-04	13	101	2	19574535
Pubmed	A quantitative chaperone interaction network reveals the architecture of cellular protein homeostasis pathways.	DHX16 DNHD1 GBF1 KLHL29 VCAN DNAH17	6.84e-04	363	101	6	25036637
Pubmed	Craniofacial abnormality with skeletal dysplasia in mice lacking chondroitin sulfate N-acetylgalactosaminyltransferase-1.	VCAN CSGALNACT1	7.43e-04	14	101	2	30459452
Pubmed	TSC-22 promotes transforming growth factor β-mediated cardiac myofibroblast differentiation by antagonizing Smad7 activity.	TGFBR2 SMURF2	7.43e-04	14	101	2	21791611
Pubmed	Identification of dynein heavy chain genes expressed in human and mouse testis: chromosomal localization of an axonemal dynein gene.	DYNC2H1 DNAH17	7.43e-04	14	101	2	9373155
Pubmed	Mouse Kif7/Costal2 is a cilia-associated protein that regulates Sonic hedgehog signaling.	DYNC2H1 PTCH1	7.43e-04	14	101	2	19666503
Pubmed	The chromatin remodeler Mi-2beta is required for establishment of the basal epidermis and normal differentiation of its progeny.	CHD4 PTCH1	7.43e-04	14	101	2	17360773
Pubmed	Complex interactions between genes controlling trafficking in primary cilia.	DYNC2H1 PTCH1	7.43e-04	14	101	2	21552265
Pubmed	Extensive molecular differences between anterior- and posterior-half-sclerotomes underlie somite polarity and spinal nerve segmentation.	TGFBR2 ARHGAP5 ROBO1	7.94e-04	62	101	3	19463158
Pubmed	Analysis of BCL6-interacting proteins by tandem mass spectrometry.	KMT2B ARHGAP35 OSBPL1A	7.94e-04	62	101	3	16147992
Pubmed	Identification of phagocytosis regulators using magnetic genome-wide CRISPR screens.	MYO9B NHLRC2 ARHGAP35 CTSD	8.21e-04	143	101	4	30397336
Pubmed	Genome-wide association study identifies multiple susceptibility loci for pulmonary fibrosis.	DPP9 FAM13A	8.55e-04	15	101	2	23583980
Pubmed	DLX1 and the NuRD complex cooperate in enhancer decommissioning and transcriptional repression.	CHD4 CHD5	8.55e-04	15	101	2	35695185
Pubmed	Structure and function of immunoglobulins.	IGHD IGHG4	8.55e-04	15	101	2	20176268
Pubmed	The chromatin remodeling factor CHD5 is a transcriptional repressor of WEE1.	CHD4 CHD5	8.55e-04	15	101	2	25247294
Pubmed	The Meckel-Gruber syndrome protein TMEM67 controls basal body positioning and epithelial branching morphogenesis in mice via the non-canonical Wnt pathway.	PTCH1 VANGL2	8.55e-04	15	101	2	26035863
Pubmed	ADAMTS2 promotes radial migration by activating TGF-β signaling in the developing neocortex.	TGFBR2 VCAN	8.55e-04	15	101	2	38871984
Pubmed	Proteomics analysis of cardiac extracellular matrix remodeling in a porcine model of ischemia/reperfusion injury.	FRAS1 VCAN CTSD	8.71e-04	64	101	3	22261194
Pubmed	Prediction of the coding sequences of mouse homologues of KIAA gene: III. the complete nucleotide sequences of 500 mouse KIAA-homologous cDNAs identified by screening of terminal sequences of cDNA clones randomly sampled from size-fractionated libraries.	KDM3A ABCA2 TIAM2 VANGL2 SEPTIN8 CHD5 PAN2	9.09e-04	529	101	7	14621295
Pubmed	Meta-analyses of genome-wide association studies identify multiple loci associated with pulmonary function.	PTCH1 FAM13A	9.76e-04	16	101	2	20010835
Pubmed	Structure and implied functions of truncated B-cell receptor mRNAs in early embryo and adult mesenchymal stem cells: Cdelta replaces Cmu in mu heavy chain-deficient mice.	IGHD IGHG4	9.76e-04	16	101	2	17124007
Pubmed	CREG1 promotes lysosomal biogenesis and function.	LAMP2 CTSD	9.76e-04	16	101	2	33966596
Pubmed	Regulation of the epithelial adhesion molecule CEACAM1 is important for palate formation.	CEACAM5 TGFBR2	9.76e-04	16	101	2	23613893
Pubmed	Transferrin receptor facilitates TGF-β and BMP signaling activation to control craniofacial morphogenesis.	PTCH1 TGFBR2	1.10e-03	17	101	2	27362800
Pubmed	Hedgehog-Activated Fat4 and PCP Pathways Mediate Mesenchymal Cell Clustering and Villus Formation in Gut Development.	PTCH1 VANGL2	1.10e-03	17	101	2	32155439
Pubmed	Chondroitin sulfate synthase 1 (Chsy1) is required for bone development and digit patterning.	PTCH1 CSGALNACT1	1.10e-03	17	101	2	22280990
Pubmed	A Functional Switch of NuRD Chromatin Remodeling Complex Subunits Regulates Mouse Cortical Development.	CHD4 CHD5	1.10e-03	17	101	2	27806305
Pubmed	Proximity-dependent Mapping of the Androgen Receptor Identifies Kruppel-like Factor 4 as a Functional Partner.	RBM26 ETV3 CHD4 CHD7 MED12	1.14e-03	268	101	5	33640491
Pubmed	The Epigenetic Factor Landscape of Developing Neocortex Is Regulated by Transcription Factors Pax6→ Tbr2→ Tbr1.	KDM3A KMT2B CHD4 CHD7	1.16e-03	157	101	4	30186101
Pubmed	Neural Stem Cells Direct Axon Guidance via Their Radial Fiber Scaffold.	ARHGAP35 ROBO1	1.24e-03	18	101	2	32707082
Pubmed	Overexpression of Smurf2 stimulates endochondral ossification through upregulation of beta-catenin.	PTCH1 SMURF2	1.24e-03	18	101	2	18052755
Pubmed	Exploring an Alternative Cysteine-Reactive Chemistry to Enable Proteome-Wide PPI Analysis by Cross-Linking Mass Spectrometry.	ANO9 EEF1E1 CHD4 DSN1 SEPTIN8 ATP8A1	1.29e-03	411	101	6	36652389
Pubmed	Sequence comparison of human and mouse genes reveals a homologous block structure in the promoter regions.	CEACAM5 MAP1A EEF1E1 GNPTAB CHD4 POMT1 TIAM2 ATP8A1 VCAN ROBO1 SMURF2	1.34e-03	1293	101	11	15342556
Pubmed	TGFβ attenuates cartilage extracellular matrix degradation via enhancing FBXO6-mediated MMP14 ubiquitination.	FRAS1 ABCA2 LAMP2 CTSD	1.36e-03	164	101	4	32409323
Cytoband	15q25	SEMA4B POLG	1.33e-04	8	101	2	15q25
Cytoband	17q25.3	NARF DNAH17 CEP131	1.47e-03	101	101	3	17q25.3
Cytoband	10q25.3	NHLRC2 PNLIPRP3	1.87e-03	29	101	2	10q25.3
GeneFamily	WD repeat domain containing	NWD1 WDR4 STXBP5 TULP4 PAK1IP1 TAF5 WDR48	8.93e-05	262	73	7	362
GeneFamily	PHD finger proteins\|NuRD complex	CHD4 CHD5	1.03e-03	12	73	2	1305
GeneFamily	Rho GTPase activating proteins\|BCH domain containing	ARHGAP35 ARHGAP5 FAM13A	1.08e-03	50	73	3	721
GeneFamily	DEAH-box helicases	DHX16 DHX29	1.86e-03	16	73	2	500
GeneFamily	Dyneins, axonemal	DNAH14 DNAH17	2.10e-03	17	73	2	536
GeneFamily	DNA polymerases	POLG POLN	3.85e-03	23	73	2	535
GeneFamily	Blood group antigens\|CD molecules\|I-set domain containing\|Immunoglobulin like domain containing	CEACAM5 PTPRM PXDNL ROBO1	4.09e-03	161	73	4	593
Coexpression	GSE27241_WT_VS_RORGT_KO_TH17_POLARIZED_CD4_TCELL_TREATED_WITH_DIGOXIN_UP	GBF1 KMT2B MYO9B CHD7 PITPNC1 ATP8A1 TULP4	5.99e-06	180	100	7	M8239
Coexpression	GSE17974_0H_VS_48H_IN_VITRO_ACT_CD4_TCELL_UP	IL11RA PLXDC1 STXBP5 ETV3 CHD9 PTPRM CSGALNACT1	9.14e-06	192	100	7	M4174
Coexpression	GSE5542_UNTREATED_VS_IFNA_AND_IFNG_TREATED_EPITHELIAL_CELLS_6H_DN	DCAF15 ABCA2 CHD9 NHLRC2 ARHGAP35 PTPRM CTSD	1.15e-05	199	100	7	M6519
Coexpression	GSE21670_TGFB_VS_IL6_TREATED_STAT3_KO_CD4_TCELL_UP	SEMA4B ETV3 CHD9 TIAM2 VANGL2 SEPTIN8 SMURF2	1.15e-05	199	100	7	M7448
Coexpression	GSE7509_UNSTIM_VS_FCGRIIB_STIM_MONOCYTE_DN	KDM3A STXBP5 POLG CHD9 ATP8A1 PAN2	4.30e-05	166	100	6	M6826
Coexpression	GSE3920_IFNB_VS_IFNG_TREATED_ENDOTHELIAL_CELL_DN	DHX16 USP45 GBF1 CHD9 PTCH1 DHX29	6.14e-05	177	100	6	M6703
Coexpression	MANNO_MIDBRAIN_NEUROTYPES_HNBGABA	GDPD1 NPY1R STXBP5 PPFIA4 GNPTAB NRXN1 TULP4 CHD5 ROBO1 CSGALNACT1 PRDM6	7.77e-05	703	100	11	M39070
Coexpression	MANNO_MIDBRAIN_NEUROTYPES_HGABA	GDPD1 STXBP5 PPFIA4 GNPTAB RBM26 ARHGAP35 PITPNC1 ATP8A1 NRXN1 TULP4 VCAN CHD5 ROBO1 CSGALNACT1	7.83e-05	1106	100	14	M39071
Coexpression	DEBIASI_APOPTOSIS_BY_REOVIRUS_INFECTION_DN	ABCA2 MYO9B POLG CHD4 ARHGAP35 PNPLA6 VCAN	9.24e-05	276	100	7	M3063
Coexpression	GSE17974_0H_VS_72H_IN_VITRO_ACT_CD4_TCELL_UP	IL11RA PLXDC1 STXBP5 CHD9 SMURF2 CSGALNACT1	9.90e-05	193	100	6	M4177
Coexpression	GSE17301_ACD3_ACD28_VS_ACD3_ACD28_AND_IFNA5_STIM_CD8_TCELL_UP	GBF1 MAP1A SEPTIN8 LMF2 OSBPL1A ASPM	1.14e-04	198	100	6	M8041
Coexpression	GSE20366_TREG_VS_NAIVE_CD4_TCELL_HOMEOSTATIC_CONVERSION_DN	GNPTAB ETV3 CHD9 TGFBR2 ARHGAP5 CSGALNACT1	1.17e-04	199	100	6	M4331
Coexpression	GSE11961_FOLLICULAR_BCELL_VS_MEMORY_BCELL_DAY7_DN	EEF1E1 CHD9 SOCS5 OSBPL1A PAK1IP1 SMURF2	1.20e-04	200	100	6	M9339
Coexpression	GSE5542_UNTREATED_VS_IFNG_TREATED_EPITHELIAL_CELLS_6H_DN	DCAF15 ABCA2 CHD9 NHLRC2 ARHGAP35 PTPRM	1.20e-04	200	100	6	M6513
ToppCell	Fetal_brain-organoid_Tanaka_cellReport-GW19-Mesenchymal\|GW19 / Sample Type, Dataset, Time_group, and Cell type.	SHLD2 PPFIA4 CYGB DPP9 DNAH17 PAN2 WDR48	7.85e-08	159	101	7	f34f2729a3872fbb2939e76ad35d7e25f71b8f57
ToppCell	Fetal_brain-organoid_Tanaka_cellReport-GW19-Mesenchymal-Unfolded_protein_responsible_cell\|GW19 / Sample Type, Dataset, Time_group, and Cell type.	SHLD2 PPFIA4 CYGB DPP9 DNAH17 PAN2 WDR48	7.85e-08	159	101	7	929ed98f6c2ad14e8d5af5c6f11a5a3d4b388cf7
ToppCell	distal-3-mesenchymal-Myofibroblast\|3 / Location, Lineage, Cell class (ontology) and Donor from 10X sequencing (macrophage renamed)	CYGB PTCH1 TNN VCAN ROBO1 C1S PRDM6	3.61e-07	199	101	7	1f20addc0d138fec02ed6ca4c518169c568de263
ToppCell	Smart-start-Cell-Wel_seq-Non-neoplastic-Glial-Neuronal\|Smart-start-Cell-Wel_seq / Platform, Oncotype, Lineage, Cell_class, celltype (level4), mutation group	ABCA2 MAP1A LAMP2 SEPTIN8 ATP8A1 SUN2 OSBPL1A	3.73e-07	200	101	7	acdef0b9096c774040948fc75621ff2b08ea2ee8
ToppCell	PND10-Mesenchymal-Mesenchymal_myocytic-Myofibroblast_vascular-Pericyte-Pericyte_G2M\|PND10 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif	MIS18BP1 PLXDC1 TRIM45 NRXN1 ASPM C1S	2.97e-06	175	101	6	15c69dd5635c9251c535f1e22467712e9667ae92
ToppCell	kidney_cells-Renal_AKI_(acute_kidney_injury)-Mesenchymal-Fibroblast-Collagen+matrisome-high_fibroblast-\|Renal_AKI_(acute_kidney_injury) / Celltypes from Cells and Nuclei per compartment and clinical group	NPY1R MAP1A PLXDC1 CYGB VCAN C1S	3.60e-06	181	101	6	c6d2a13df3b74fade3b0c71e285b4c14c8e52413
ToppCell	kidney_cells-Renal_AKI_(acute_kidney_injury)-Mesenchymal-Fibroblast-Collagen+matrisome-high_fibroblast\|Renal_AKI_(acute_kidney_injury) / Celltypes from Cells and Nuclei per compartment and clinical group	NPY1R MAP1A PLXDC1 CYGB VCAN C1S	3.60e-06	181	101	6	c62b0a2422377ffadaab63edd538e87a06fa5017
ToppCell	5'-Adult-Distal_Rectal-Epithelial-Tuft-related\|Adult / Celltypes from developing, pediatric, Crohn's, & adult GI tract	SEMA4B NPY1R CEACAM5 STXBP5 GNPTAB DMBT1	4.21e-06	186	101	6	4046b701aa29712d9f7c774f8955215122c3c003
ToppCell	5'-Adult-Distal_Rectal-Epithelial-Tuft-related-BEST4+_epithelial\|Adult / Celltypes from developing, pediatric, Crohn's, & adult GI tract	SEMA4B NPY1R CEACAM5 STXBP5 GNPTAB DMBT1	4.21e-06	186	101	6	bd5837033c1ffcbe5dd30195cc4846a2ba351bcd
ToppCell	5'-Adult-LargeIntestine-Mesenchymal-fibroblastic-Stromal_2_(NPY+)\|Adult / Celltypes from developing, pediatric, Crohn's, & adult GI tract	CYGB PTCH1 PTPRM VCAN ROBO1 C1S	4.48e-06	188	101	6	997dcfc4f08738ab398d8abc15e4fd2fc6619862
ToppCell	Adult\|World / Lineage, Cell type, age group and donor	SEMA4B MYO9B SIPA1L3 KLHL29 DPP9 DMBT1	4.62e-06	189	101	6	5cd285bfad973125d46d704fec18b21266a63379
ToppCell	renal_papilla_nuclei-Adult_normal_reference-Epithelial-Intermediate_tubule_epithelial_cell-kidney_loop_of_Henle_thin_ascending_limb_epithelial_cell-Ascending_Thin_Limb_Cell\|Adult_normal_reference / Celltypes from Cells and Nuclei per compartment and clinical group	SEMA4B FRAS1 PITPNC1 KLHL29 DNAH17 WWC1	4.76e-06	190	101	6	59bbbd2c8d4b7ce46c54ca8022b1557e7e5eee2a
ToppCell	RV-02._Fibroblast_II\|World / Chamber and Cluster_Paper	DYNC2H1 CHD9 PITPNC1 TGFBR2 VCAN ROBO1	5.52e-06	195	101	6	ce90b30dcdb56d4cd925cdb79fd9d7cefd998f48
ToppCell	LPS_IL1RA_TNF\|World / Treatment groups by lineage, cell group, cell type	DYNC2H1 CHD9 FAM13A PXDNL VCAN C1S	5.86e-06	197	101	6	0a6550dce156fc81f15b1e7830d331ca50d87d06
ToppCell	LPS_IL1RA_TNF-Mesenchymal_fibroblastic-Fibroblasts-MatrixFB\|LPS_IL1RA_TNF / Treatment groups by lineage, cell group, cell type	DYNC2H1 PTCH1 PXDNL VCAN ROBO1 C1S	6.21e-06	199	101	6	30d3e8c0681ec11f86dd38c5f48d21187a1b4f90
ToppCell	LPS_anti-TNF-Mesenchymal_fibroblastic-Fibroblasts-MatrixFB\|LPS_anti-TNF / Treatment groups by lineage, cell group, cell type	DYNC2H1 PTCH1 PXDNL VCAN ROBO1 C1S	6.39e-06	200	101	6	9b0916d8d07ac2bf1739f7be5296bf77ffee6094
ToppCell	distal-mesenchymal-Myofibroblast-3\|distal / Location, Lineage, Cell class (ontology) and Donor from 10X sequencing (macrophage renamed)	PTCH1 TNN VCAN ROBO1 C1S PRDM6	6.39e-06	200	101	6	069c8949b33ecfdb6da32992002d4060ff6082bc
ToppCell	Control-Control-Myeloid-immature_Neutrophil\|Control / Disease, condition lineage and cell class	SEMA4B GBF1 STXBP5 CHD7 ASPM PAK1IP1	6.39e-06	200	101	6	118321ac443feb42aee171baccfc4610f00a8822
ToppCell	Smart-start-Cell-Wel_seq-Non-neoplastic-Glial-Neuronal-Oligodendrocyte-Oligodendrocyte\|Smart-start-Cell-Wel_seq / Platform, Oncotype, Lineage, Cell_class, celltype (level4), mutation group	ABCA2 LAMP2 SEPTIN8 ATP8A1 SUN2 OSBPL1A	6.39e-06	200	101	6	091a18d6efed81cab99955c3047f172170f70476
ToppCell	Smart-start-Cell-Wel_seq-Non-neoplastic-Glial-Neuronal-Oligodendrocyte\|Smart-start-Cell-Wel_seq / Platform, Oncotype, Lineage, Cell_class, celltype (level4), mutation group	ABCA2 LAMP2 SEPTIN8 ATP8A1 SUN2 OSBPL1A	6.39e-06	200	101	6	3b8513defe25262ab4b492345b2628570eaefd17
ToppCell	distal-mesenchymal-Myofibroblast\|distal / Location, Lineage, Cell class (ontology) and Donor from 10X sequencing (macrophage renamed)	PTCH1 TNN VCAN ROBO1 C1S PRDM6	6.39e-06	200	101	6	61854a459385cd9295be37157a8f81a2c227dff3
ToppCell	10x_3'_v2v3-Non-neoplastic-Glial-Neuronal-Oligodendrocyte-Oligodendrocyte\|10x_3'_v2v3 / Platform, Oncotype, Lineage, Cell_class, celltype (level4), mutation group	ABCA2 LAMP2 SEPTIN8 ATP8A1 SUN2 OSBPL1A	6.39e-06	200	101	6	0bfd41c12887479ceb62c3db0a3c3ba5007eb62b
ToppCell	10x_3'_v2v3-Non-neoplastic-Glial-Neuronal-Oligodendrocyte\|10x_3'_v2v3 / Platform, Oncotype, Lineage, Cell_class, celltype (level4), mutation group	ABCA2 LAMP2 SEPTIN8 ATP8A1 SUN2 OSBPL1A	6.39e-06	200	101	6	159377d904394d91e09913131e9a93e08189955a
ToppCell	3'-GW_trimst-1-SmallIntestine-Mesenchymal-immature_mesenchymal_cell-Mesoderm_2_(ZEB2+)\|GW_trimst-1 / Celltypes from developing, pediatric, Crohn's, & adult GI tract	CYGB PTCH1 KLHL29 VCAN ROBO1 C1S	6.39e-06	200	101	6	ac8a5d71acd4d401995babd233f0d3738e8ad2a5
ToppCell	LPS-antiTNF-Epithelial_alveolar-Mes-Like-Differentiating_AT1\|LPS-antiTNF / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2	ABCA2 NPY1R MAP1A TIAM2 TNN	1.10e-05	128	101	5	2cf0384240a4a663869cf6b27d954236f6214a9a
ToppCell	facs-Pancreas-Exocrine-18m-Epithelial-pancreatic_B_cell\|Pancreas / Large_Intestine_Pancreas_Liver - method, tissue, subtissue, age, lineage, cell ontology and free annotation	KMT2B MAP1A POMT1 CHD5 DHX29	3.51e-05	163	101	5	953a7db7e90a913e81002d2141fbbd5f1fdf2197
ToppCell	3'-GW_trimst-1-LargeIntestine-Mesenchymal-fibroblastic-Stromal_1_(ADAMDEC1+)\|GW_trimst-1 / Celltypes from developing, pediatric, Crohn's, & adult GI tract	CYGB PTCH1 ADPRH VCAN CSGALNACT1	3.72e-05	165	101	5	01c6355177d79b4523c8b20366e20b2b62c6d08d
ToppCell	droplet-Liver-LIVER-NPC-1m-Myeloid-plasmacytoid_dendritic_cells\|Liver / Large_Intestine_Pancreas_Liver - method, tissue, subtissue, age, lineage, cell ontology and free annotation	SEMA4B PLXDC1 PPFIA4 PHETA2 VANGL2	4.06e-05	168	101	5	e8878ec68b21c8d5694d7209b816d2f869673164
ToppCell	droplet-Liver-LIVER-NPC-1m-Myeloid-plasmacytoid_dendritic_cell\|Liver / Large_Intestine_Pancreas_Liver - method, tissue, subtissue, age, lineage, cell ontology and free annotation	SEMA4B PLXDC1 PPFIA4 PHETA2 VANGL2	4.06e-05	168	101	5	a007758c219d3d5db2b5529f29af63be0d408304
ToppCell	5'-Adult-LargeIntestine-Mesenchymal-fibroblastic-Stromal_1_(ADAMDEC1+)\|Adult / Celltypes from developing, pediatric, Crohn's, & adult GI tract	DYNC2H1 CYGB PTCH1 VCAN C1S	4.17e-05	169	101	5	c0824a93674e2bff0f09b2d2fab5bab016a2e379
ToppCell	5'-Parenchyma_lung-Immune_Myeloid-Myeloid_macrophage-alveolar_macrophage-Alveolar_macrophages-Alveolar_macrophages_L.1.0.5.0\|5' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5	MIS18BP1 MYO9B PNPLA6 VCAN CTSD	4.79e-05	174	101	5	d5c22b43531414951666ee7542a66ed9380e2d14
ToppCell	droplet-Lung-21m-Hematologic-Lymphocytic_NK_ILC-natural_killer_cell-proliferating_NK\|21m / method, tissue, age, lineage, sublineage, cell ontologies, cell type and subtype	MIS18BP1 ARHGAP35 DSN1 SOCS5 TAF5	4.92e-05	175	101	5	6751ee4b312d7f87275f2c35e5878cfc3be3ebe3
ToppCell	facs-Marrow-KLS-18m-Lymphocytic-early_pro_B_cell\|Marrow / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation	PLXDC1 VANGL2 TRIM45 PTPRM POLN	5.06e-05	176	101	5	7292e014b8f697f0c2e9f47c48333de95cb44a69
ToppCell	facs-Marrow-KLS-18m-Lymphocytic-early_pro-B_cell\|Marrow / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation	PLXDC1 VANGL2 TRIM45 PTPRM POLN	5.06e-05	176	101	5	88ca2f83d8301633232735f39b0683efe49d0b86
ToppCell	droplet-Kidney-KIDNEY-30m-Lymphocytic-Epcam____thick_ascending_tube_S_epithelial_cell\|Kidney / Skin_Bladder_Kidney_Mammary_Gland - method, tissue, subtissue, age, lineage, cell ontology and free annotation	ANO9 MIS18BP1 PTCH1 ASPM WDR48	5.48e-05	179	101	5	4166c4e1a8748a79ac6a11fd0b97c5344be2321b
ToppCell	PCW_07-8.5-Mesenchymal-Mesenchymal_fibroblastic-mes_immature3_(17)\|PCW_07-8.5 / Celltypes from embryonic and fetal-stage human lung	PTCH1 FAM13A VCAN ROBO1 PRDM6	6.74e-05	187	101	5	a9316e2818217ec5feae9cf8816f7249803caee6
ToppCell	human_hepatoblastoma-Tumor_cells-T5\|Tumor_cells / Sample and Cell Type and Tumor Cluster (all cells)	FRAS1 SIPA1L3 PITPNC1 PTCH1 VCAN	6.91e-05	188	101	5	b070a0667f1ee9b825b267b6c389b7c42fc436f9
ToppCell	renal_cortex_nuclei-Renal_AKI_(acute_kidney_injury)-Mesenchymal-Fibroblast-high_collagen-matrisome_fibroblast\|Renal_AKI_(acute_kidney_injury) / Celltypes from Cells and Nuclei per compartment and clinical group	NPY1R PTCH1 VCAN ROBO1 C1S	7.09e-05	189	101	5	71397e993a77d70b2eeede240bdfc7660b558987
ToppCell	renal_cortex_nuclei-Renal_AKI_(acute_kidney_injury)-Mesenchymal-Fibroblast-high_collagen-matrisome_fibroblast-\|Renal_AKI_(acute_kidney_injury) / Celltypes from Cells and Nuclei per compartment and clinical group	NPY1R PTCH1 VCAN ROBO1 C1S	7.09e-05	189	101	5	4eea4759520c312bd17a681034d8074e47093d2b
ToppCell	PBMC_fresh-frozen-Mild-Moderate_convalescent_d36-51-Lymphocytic-Lymphocytic_B-B_cell-B_c04-SOX5-TNFRSF1B\|Mild-Moderate_convalescent_d36-51 / Compartment, severity and other cell annotations on 10x 3' data (130k)	SEMA4B SIPA1L3 IGHD IGHG4 CSGALNACT1	7.09e-05	189	101	5	2b53dae0e6e85b7139f8a9872fbebb3705b2f1bf
ToppCell	facs-Lung-3m-Endothelial-capillary_endothelial-capillary_endothelial_cell-capillary_aerocyte_endothelial_cell\|3m / method, tissue, age, lineage, sublineage, cell ontologies, cell type and subtype	PLXDC1 NHLRC2 PITPNC1 ATP8A1 CSGALNACT1	7.27e-05	190	101	5	52213cd2a6a20772d4f49ba9ac0407abafa528db
ToppCell	renal_papilla_nuclei-Adult_normal_reference-Epithelial-Intermediate_tubule_epithelial_cell-kidney_loop_of_Henle_thin_ascending_limb_epithelial_cell\|Adult_normal_reference / Celltypes from Cells and Nuclei per compartment and clinical group	SEMA4B FRAS1 KLHL29 DNAH17 WWC1	7.27e-05	190	101	5	1cf023e3c6924d6a06f353d4b62444b6f2fee8a7
ToppCell	Control-Lymphoid_B-B_intermediate\|Control / Disease group, lineage and cell class	SEMA4B CHD7 IGHD IGHG4 CSGALNACT1	7.45e-05	191	101	5	0082181dbc39c7c4fd3aa34c3ed61439548e844b
ToppCell	LPS-IL1RA+antiTNF-Stromal_mesenchymal-Matrix_Fibroblast-Activated_MatrixFB\|LPS-IL1RA+antiTNF / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2	PXDNL VCAN ROBO1 C1S PRDM6	7.45e-05	191	101	5	b13229bb7f3713a392271aaf5dbae3edd1b9fe5a
ToppCell	droplet-Lung-21m-Mesenchymal-fibroblast\|21m / method, tissue, age, lineage, sublineage, cell ontologies, cell type and subtype	IL11RA CYGB C1S PRDM6 SLC27A3	7.45e-05	191	101	5	8a73d2df079566fca4cbb5cdb85721c2e87134c8
ToppCell	CD8+_Memory_T_cell-CV-7\|CD8+_Memory_T_cell / cell class, Virus stimulation and cluster	GBF1 GNPTAB LAMP2 TGFBR2 ATP8A1	7.45e-05	191	101	5	9454f642c3621370fa23640b631301346b300950
ToppCell	PBMC-Mild-Lymphocyte-B-B_cell-B_intermediate-B_intermediate-0\|Mild / Location, Disease Group, Cell group, Cell class and sub_cluster (2021.03.01)	SEMA4B SIPA1L3 CHD7 IGHD CSGALNACT1	7.45e-05	191	101	5	5a9a592875fbd0b1429b48db29a760fdc9c2c856
ToppCell	droplet-Lung-21m-Mesenchymal\|21m / method, tissue, age, lineage, sublineage, cell ontologies, cell type and subtype	IL11RA CYGB C1S PRDM6 SLC27A3	7.45e-05	191	101	5	10a9db1caa0fdb51ace8537f42b2c66f7c97e0f5
ToppCell	PBMC-Control-Lymphocyte-B-B_cell-B_intermediate-\|Control / Location, Disease Group, Cell group, Cell class and sub_cluster (2021.03.09)	SEMA4B CHD7 IGHD IGHG4 CSGALNACT1	7.64e-05	192	101	5	f9f64ad7bab1433e9a45adb7db7f43ce3f591b47
ToppCell	droplet-Limb_Muscle-MUSCLE-30m-Mesenchymal-mesenchymal_stem_cell\|Limb_Muscle / Tongue_Heart_Limb_Muscle_Aorta_Diaphragm - method, tissue, subtissue, age, lineage, cell ontology and free annotation	IL11RA CYGB CHD9 VCAN C1S	7.64e-05	192	101	5	11088878043a6ff95ba1970361256a82e434b80a
ToppCell	PBMC-Control-Lymphocyte-B-B_cell-B_intermediate\|Control / Location, Disease Group, Cell group, Cell class (2021.03.09)	SEMA4B CHD7 IGHD IGHG4 CSGALNACT1	7.64e-05	192	101	5	4884fd8ffa6fd6c30d7ac6bf447456b3397eabc5
ToppCell	PBMC-Control-Lymphocyte-B-B_cell-B_intermediate-B_intermediate-0\|Control / Location, Disease Group, Cell group, Cell class and sub_cluster (2021.03.01)	SEMA4B CHD7 IGHD IGHG4 CSGALNACT1	7.64e-05	192	101	5	89b8ebdc285ed3c0f807fd1157271130d37dfa41
ToppCell	droplet-Lung-nan-21m-Mesenchymal\|Lung / Lung_Trachea - method, tissue, subtissue, age, lineage, cell ontology and free annotation	IL11RA FAM13A C1S PRDM6 SLC27A3	7.64e-05	192	101	5	e429e8fbc48ad26204a0197b9129e58be56bd7b6
ToppCell	10x_3'_v2v3-Non-neoplastic-Glial-Neuronal-Oligodendrocyte-Oligodendrocyte-Z\|10x_3'_v2v3 / Platform, Oncotype, Lineage, Cell_class, celltype (level4), mutation group	ABCA2 LAMP2 SEPTIN8 ATP8A1 OSBPL1A	7.64e-05	192	101	5	8dc3016601148243196e925641c9507e9d58c9e0
ToppCell	PBMC-Mild-Lymphocyte-B-B_cell-B_intermediate\|Mild / Location, Disease Group, Cell group, Cell class and sub_cluster (2021.03.01)	SEMA4B SIPA1L3 CHD7 IGHD CSGALNACT1	7.82e-05	193	101	5	7cc10e8b51091869d46e462f3214999e7b5348b1
ToppCell	PBMC-Control-Lymphocyte-B-B_cell-B_intermediate\|Control / Location, Disease Group, Cell group, Cell class and sub_cluster (2021.03.01)	SEMA4B CHD7 IGHD IGHG4 CSGALNACT1	7.82e-05	193	101	5	8f1d6024ef092923321e6efd441b8d476db70aed
ToppCell	LV-01._Fibroblast_I\|LV / Chamber and Cluster_Paper	DYNC2H1 CHD9 VCAN ROBO1 C1S	7.82e-05	193	101	5	dc17f3b9758936d428cf17f77a1ce6d4c479b165
ToppCell	PBMC_fresh-frozen-Mild-Moderate_convalescent_d36-51-Lymphocytic-Lymphocytic_B-B_cell-B_c02-MS4A1-CD27\|Mild-Moderate_convalescent_d36-51 / Compartment, severity and other cell annotations on 10x 3' data (130k)	SEMA4B SIPA1L3 IGHD IGHG4 CSGALNACT1	7.82e-05	193	101	5	749faa5c592ee354733f5a7363a4277ef3462b93
ToppCell	droplet-Limb_Muscle-nan-18m-Mesenchymal-mesenchymal_stem_cell\|Limb_Muscle / Tongue_Heart_Limb_Muscle_Aorta_Diaphragm - method, tissue, subtissue, age, lineage, cell ontology and free annotation	IL11RA CYGB TGFBR2 VCAN C1S	7.82e-05	193	101	5	45b5cab4dfeb0ed3b13631db5963740a792b810f
ToppCell	RV-02._Fibroblast_II\|RV / Chamber and Cluster_Paper	CHD9 PITPNC1 VCAN ROBO1 C1S	8.02e-05	194	101	5	11c79a8c56ece42713b04b321982e41e239f07a5
ToppCell	PBMC-Mild-Lymphocyte-B-B_cell-B_intermediate\|Mild / Location, Disease Group, Cell group, Cell class (2021.03.09)	SEMA4B SIPA1L3 CHD7 IGHD CSGALNACT1	8.02e-05	194	101	5	2b61023a602d336ed0de174e9141046173db34e6
ToppCell	LV-02._Fibroblast_II\|LV / Chamber and Cluster_Paper	CHD9 PITPNC1 VCAN ROBO1 C1S	8.02e-05	194	101	5	014d2feb5db2a6a35ef759761a41e466e108c3c1
ToppCell	renal_cortex_nuclei-Renal_AKI_(acute_kidney_injury)-Mesenchymal-Fibroblast-Collagen-low_Matrisome-low_fibroblast-\|Renal_AKI_(acute_kidney_injury) / Celltypes from Cells and Nuclei per compartment and clinical group	NPY1R PLXDC1 PTCH1 VCAN ROBO1	8.02e-05	194	101	5	cf0244a29934e515446ac917d3c30672b460fb04
ToppCell	PBMC-Mild-Lymphocyte-B-B_cell-B_intermediate-\|Mild / Location, Disease Group, Cell group, Cell class and sub_cluster (2021.03.09)	SEMA4B SIPA1L3 CHD7 IGHD CSGALNACT1	8.02e-05	194	101	5	f2486b19ac52a48d19f80b38a5536bee3dad745b
ToppCell	facs-Heart-RA-18m-Mesenchymal\|Heart / Tongue_Heart_Limb_Muscle_Aorta_Diaphragm - method, tissue, subtissue, age, lineage, cell ontology and free annotation	IL11RA MAP1A CYGB VCAN C1S	8.02e-05	194	101	5	bc945450b350f597c3ff910d3a14a533d90086a8
ToppCell	renal_cortex_nuclei-Renal_AKI_(acute_kidney_injury)-Mesenchymal-Fibroblast-Collagen-low_Matrisome-low_fibroblast\|Renal_AKI_(acute_kidney_injury) / Celltypes from Cells and Nuclei per compartment and clinical group	NPY1R PLXDC1 PTCH1 VCAN ROBO1	8.02e-05	194	101	5	ba7f971fb9a19423602da60770f23d9fead4a451
ToppCell	renal_medulla_nuclei-Renal_AKI_(acute_kidney_injury)-Mesenchymal\|Renal_AKI_(acute_kidney_injury) / Celltypes from Cells and Nuclei per compartment and clinical group	NPY1R PLXDC1 PTCH1 VCAN C1S	8.21e-05	195	101	5	d9a5c75d31c6e8bb1e1ab7fd115ac5deb5fb1c8d
ToppCell	facs-Heart-RA-18m-Mesenchymal-fibroblast_of_cardiac_tissue\|Heart / Tongue_Heart_Limb_Muscle_Aorta_Diaphragm - method, tissue, subtissue, age, lineage, cell ontology and free annotation	IL11RA MAP1A CYGB VCAN C1S	8.21e-05	195	101	5	690d6e15d7c863fc8f2d33b1f7bf86f019f415c9
ToppCell	Bronchial_Biopsy-Immune-Luminal_Macrophages\|Immune / Tissue, Lineage and Cell class of Lung Cells from 10X	LAMP2 KLHL29 OSBPL1A CTSD SLC27A3	8.21e-05	195	101	5	6800c17026ec6c56132bf4664b8fcd74d7836579
ToppCell	droplet-Bladder-nan-3m-Epithelial-bladder_mesenchymal_cell_(Car3+)\|Bladder / Skin_Bladder_Kidney_Mammary_Gland - method, tissue, subtissue, age, lineage, cell ontology and free annotation	IL11RA CYGB VCAN C1S PRDM6	8.21e-05	195	101	5	095b8e0be385b6390420589124a95fa4ba3682ab
ToppCell	3'-Broncho-tracheal-Mesenchymal-Fibroblastic-fibroblastic_type_2-Peribronchial_fibroblasts-Peribronchial_fibroblasts_L.2.1.3.1\|3' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5	PTCH1 TNN VCAN C1S PRDM6	8.21e-05	195	101	5	51db90e7611f7d69980878c046505ff34212079b
ToppCell	facs-Heart-RA-18m-Mesenchymal-fibroblast_of_cardiac_tissue\|Heart / Tongue_Heart_Limb_Muscle_Aorta_Diaphragm - method, tissue, subtissue, age, lineage, cell ontology and free annotation	IL11RA MAP1A CYGB VCAN C1S	8.21e-05	195	101	5	5c05e2bcea3d5d7ebe6325f7187ccf83301053d8
ToppCell	droplet-Limb_Muscle-MUSCLE-30m-Mesenchymal\|Limb_Muscle / Tongue_Heart_Limb_Muscle_Aorta_Diaphragm - method, tissue, subtissue, age, lineage, cell ontology and free annotation	IL11RA CYGB CHD9 ARHGAP5 C1S	8.21e-05	195	101	5	5c86fddd6d0530beecf45ea5ba6b823123847696
ToppCell	droplet-Bladder-nan-3m-Epithelial-bladder_cell\|Bladder / Skin_Bladder_Kidney_Mammary_Gland - method, tissue, subtissue, age, lineage, cell ontology and free annotation	IL11RA CYGB VCAN C1S PRDM6	8.41e-05	196	101	5	f47e551ba484687ba6ce8c29a085106131364042
ToppCell	Smart-start-Cell-Wel_seq-Non-neoplastic-Glial-Neuronal-Oligodendrocyte-Oligodendrocyte-E\|Smart-start-Cell-Wel_seq / Platform, Oncotype, Lineage, Cell_class, celltype (level4), mutation group	ABCA2 MAP1A LAMP2 SEPTIN8 DNAH17	8.41e-05	196	101	5	37a5f9f3988778655580bd0383811bb4930c1551
ToppCell	5'-GW_trimst-2-SmallIntestine-Mesenchymal-myocytic-myofibroblast_(RSPO2+)\|GW_trimst-2 / Celltypes from developing, pediatric, Crohn's, & adult GI tract	PTCH1 VCAN ROBO1 C1S PRDM6	8.62e-05	197	101	5	398a66c06df63567b176ab2cc85e27837e94d0d9
ToppCell	mild-low-quality_cells\|mild / Cohort 1 (10x PBMC) with disease condition, cell group and cell class	IL11RA ANO9 ABCA2 PLXDC1 PTCH1	8.62e-05	197	101	5	e4331969bd911d1ebb5453f40a7057297b5389b4
ToppCell	10x_3'_v2v3-Non-neoplastic-Glial-Neuronal-Oligodendrocyte-Oligodendrocyte-B\|10x_3'_v2v3 / Platform, Oncotype, Lineage, Cell_class, celltype (level4), mutation group	ABCA2 SEPTIN8 ATP8A1 SUN2 OSBPL1A	8.62e-05	197	101	5	82b8e22317cad6d3786bd70d91107007c0ccd7cd
ToppCell	mild_COVID-19-B_intermediate\|mild_COVID-19 / disease group, cell group and cell class (v2)	SEMA4B CHD7 IGHD IGHG4 CSGALNACT1	8.62e-05	197	101	5	f669500120646f69355a6f920b892a6f2faeab63
ToppCell	droplet-Bladder-BLADDER-1m-Epithelial-bladder_mesenchymal_cell_(Car3+)\|Bladder / Skin_Bladder_Kidney_Mammary_Gland - method, tissue, subtissue, age, lineage, cell ontology and free annotation	IL11RA CYGB VCAN C1S PRDM6	8.62e-05	197	101	5	86145bc1e585b4ae136e755cafd6579da2abfa65
ToppCell	Parenchymal-NucSeq-Stromal-Fibroblastic-Fibro_peribronchial\|NucSeq / Cell types per location group and 10X technology with lineage, and cell group designations	PTCH1 VCAN ROBO1 C1S PRDM6	8.62e-05	197	101	5	44673c38384453207871d3fd8e8ba9093cc06bc5
ToppCell	mild_COVID-19-B_intermediate\|World / disease group, cell group and cell class (v2)	SEMA4B CHD7 IGHD IGHG4 CSGALNACT1	8.62e-05	197	101	5	e909b898b7458071f176b6c04356ea3540589153
ToppCell	5'-Adult-LargeIntestine-Epithelial-Tuft-related-BEST4+_epithelial\|Adult / Celltypes from developing, pediatric, Crohn's, & adult GI tract	NPY1R CEACAM5 GNPTAB FAM13A DMBT1	8.83e-05	198	101	5	efdbac7a3a02bff4ca48841772e0c136556c2b9b
ToppCell	droplet-Bladder-BLADDER-1m-Epithelial-bladder_cell\|Bladder / Skin_Bladder_Kidney_Mammary_Gland - method, tissue, subtissue, age, lineage, cell ontology and free annotation	IL11RA CYGB VCAN C1S PRDM6	8.83e-05	198	101	5	8f202ed4692ea2c139ff05d4805c704ee4be095c
ToppCell	10x_3'_v2v3-Non-neoplastic-Glial-Neuronal-Oligodendrocyte-Oligodendrocyte-G\|10x_3'_v2v3 / Platform, Oncotype, Lineage, Cell_class, celltype (level4), mutation group	ABCA2 SEPTIN8 ATP8A1 SUN2 OSBPL1A	8.83e-05	198	101	5	bdabdb11217ea16e5863aa6bfb0f04d48b17f81e
ToppCell	COVID-19-lung-Fibroblast\|lung / Disease (COVID-19 only), tissue and cell type	FRAS1 VCAN ROBO1 C1S PRDM6	8.83e-05	198	101	5	df3de77216f5c5d6141ec44d01c56b942f611838
ToppCell	Neuron-Postmitotic-Excitatory_Neuron_-Newborn-35\|World / Primary Cells by Cluster	CHD9 TIAM2 FAM13A NRXN1 VCAN	8.83e-05	198	101	5	de5214a85fe017eb23d4aa8af624464f062ec57e
ToppCell	COVID-19-Myeloid-Migratory_DC\|Myeloid / Condition, Lineage and Cell class	ANO9 ETV3 VANGL2 ATP8A1 ROBO1	8.83e-05	198	101	5	90f3b227cbc61c268d6d94bc9945a08d83d2d3d5
ToppCell	3'-GW_trimst-1-SmallIntestine-Mesenchymal-fibroblastic\|GW_trimst-1 / Celltypes from developing, pediatric, Crohn's, & adult GI tract	IL11RA CYGB PTCH1 VCAN C1S	9.04e-05	199	101	5	30ab0750d51f168b18c434c974d24a4e70f29cc7
ToppCell	COVID-19-COVID-19_Mild-Lymphocyte-B-B_intermediate\|COVID-19_Mild / Disease, condition lineage and cell class	SEMA4B SIPA1L3 CHD7 IGHD CSGALNACT1	9.04e-05	199	101	5	1c6a08d01f6c1a2a4b6587d3a4522efbd03275e1
ToppCell	Control-Control-Lymphocyte-B-B_intermediate\|Control / Disease, condition lineage and cell class	SEMA4B CHD7 IGHD IGHG4 CSGALNACT1	9.04e-05	199	101	5	ee6f07eec7edfe41d2f7fcb0b509ce00e99a6a95
ToppCell	LPS_IL1RA-Mesenchymal_fibroblastic-Fibroblasts-MatrixFB\|LPS_IL1RA / Treatment groups by lineage, cell group, cell type	DYNC2H1 PTCH1 PXDNL VCAN C1S	9.04e-05	199	101	5	a7dd94b172c973a131a6792f8ccd9bfe44d984ac
ToppCell	BAL-Control-cDC_0\|Control / Compartment, Disease Groups and Clusters	LAMP2 VCAN OSBPL1A CTSD SLC27A3	9.04e-05	199	101	5	4518ffa51ead9da1ddf07bf048b18602e50f0f84
ToppCell	Smart-start-Cell-Wel_seq-Non-neoplastic-Glial-Neuronal-Oligodendrocyte-Oligodendrocyte-G\|Smart-start-Cell-Wel_seq / Platform, Oncotype, Lineage, Cell_class, celltype (level4), mutation group	LAMP2 SEPTIN8 ATP8A1 SUN2 OSBPL1A	9.04e-05	199	101	5	214a6a267e77e5508867b9eb48c4fbc7855ed0a0
ToppCell	Transplant_Alveoli_and_parenchyma-Mesenchymal-Fibroblasts\|Mesenchymal / Tissue, Lineage and Cell class of Lung Cells from 10X	MAP1A CYGB TGFBR2 VCAN C1S	9.04e-05	199	101	5	f19c683f38bca3bfee40396f27423441051dec67
ToppCell	Neuronal-Inhibitory-iB-iB_4(SST)-CALB1--L1-3\|Neuronal / cells hierarchy compared to all cells using T-Statistic	SIPA1L3 PITPNC1 PTPRM DNAH17 ROBO1	9.25e-05	200	101	5	f3c710f0fc8a7bfb5371d1aff6e3d8f266953153
ToppCell	Neuronal-Inhibitory-iB-iB_4(SST)-CALB1-\|Neuronal / cells hierarchy compared to all cells using T-Statistic	SIPA1L3 PITPNC1 PTPRM DNAH17 ROBO1	9.25e-05	200	101	5	70a06fd7fb8de2c8ec3e3182e4476ced049daeae
ToppCell	10x_3'_v2v3-Non-neoplastic-Glial-Neuronal-Oligodendrocyte-Oligodendrocyte-F\|10x_3'_v2v3 / Platform, Oncotype, Lineage, Cell_class, celltype (level4), mutation group	ABCA2 LAMP2 SEPTIN8 ATP8A1 SUN2	9.25e-05	200	101	5	3ce8a2db8c25e1169a0a544f644a63104749c5ee
ToppCell	3'-GW_trimst-1-SmallIntestine-Mesenchymal-immature_mesenchymal_cell\|GW_trimst-1 / Celltypes from developing, pediatric, Crohn's, & adult GI tract	PTCH1 KLHL29 VCAN ROBO1 C1S	9.25e-05	200	101	5	3dacd0afe69bc16bb33336ea9ea99a9cd47731d9
ToppCell	Neuronal-Inhibitory-iB-iB_4(SST)-CALB1\|Neuronal / cells hierarchy compared to all cells using T-Statistic	SIPA1L3 PITPNC1 PTPRM DNAH17 ROBO1	9.25e-05	200	101	5	1639982d9d994918f7912d12d9d7cfcbc9da4145
Drug	Reserpinic acid hydrochloride; Down 200; 9.2uM; PC3; HT_HG-U133A	DCAF15 CEACAM5 KMT2B WDR4 ARHGAP35 FAM13A WWC1 SLC27A3	2.67e-06	198	100	8	6603_DN
Disease	epididymis-specific alpha-mannosidase measurement	GNPTAB C1S	2.27e-04	7	98	2	EFO_0801577
Disease	CHARGE syndrome (implicated_via_orthology)	CHD9 CHD7	2.27e-04	7	98	2	DOID:0050834 (implicated_via_orthology)
Disease	complement C1r subcomponent measurement	IGHD C1S	2.27e-04	7	98	2	EFO_0008090
Disease	Moderate albuminuria, diabetic nephropathy	CYGB WWC1	3.02e-04	8	98	2	EFO_0000401, HP_0012594
Disease	tyrosine-protein phosphatase non-receptor type 4 measurement	IGHD C1S	3.87e-04	9	98	2	EFO_0802172
Disease	hepatocellular carcinoma (is_marker_for)	KDM3A CHD4 PTCH1 DSN1 CHD5 ASPM	5.14e-04	301	98	6	DOID:684 (is_marker_for)
Disease	niacinamide measurement	SEPTIN8 OSBPL1A	7.05e-04	12	98	2	EFO_0010511
Disease	pulmonary function measurement, FEV/FEC ratio	PITPNC1 PTCH1 FAM13A	7.38e-04	53	98	3	EFO_0003892, EFO_0004713
Disease	Familial thoracic aortic aneurysm and aortic dissection	TGFBR2 VCAN MED12	7.38e-04	53	98	3	C4707243
Disease	Hamman-Rich syndrome	DPP9 FAM13A	9.68e-04	14	98	2	C0085786
Disease	cathepsin D measurement	GNPTAB CTSD	1.11e-03	15	98	2	EFO_0010611
Disease	Liver carcinoma	KMT2B PLXDC1 TONSL ASPM ROBO1 CEP131 CTSD	1.53e-03	507	98	7	C2239176
Disease	congenital heart disease (implicated_via_orthology)	KMT2B CHD9 CHD7	1.59e-03	69	98	3	DOID:1682 (implicated_via_orthology)
Disease	Nonorganic psychosis	NPY1R MED12 WWC1	1.59e-03	69	98	3	C0349204
Disease	cortical surface area measurement	DHX16 MYO9B CHD7 PTCH1 VANGL2 KLHL29 FAM13A VCAN ROBO1 TAF5 PRDM6 WWC1	1.67e-03	1345	98	12	EFO_0010736
Disease	cardiomyopathy (is_implicated_in)	POLG POMT1	1.80e-03	19	98	2	DOID:0050700 (is_implicated_in)
Disease	Usual Interstitial Pneumonia	DPP9 FAM13A	1.80e-03	19	98	2	C4721509
Disease	Hamman-Rich Disease	DPP9 FAM13A	1.80e-03	19	98	2	C4721508
Disease	Familial Idiopathic Pulmonary Fibrosis	DPP9 FAM13A	2.00e-03	20	98	2	C4721952
Disease	kidney disease (biomarker_via_orthology)	CYGB TGFBR2	2.20e-03	21	98	2	DOID:557 (biomarker_via_orthology)
Disease	cerebellar cortex volume measurement	PXDNL WWC1	2.20e-03	21	98	2	EFO_0010291
Disease	Idiopathic Pulmonary Fibrosis	DPP9 FAM13A	2.20e-03	21	98	2	C1800706
Disease	complement factor H-related protein 3 measurement	NWD1 PITPNC1 KIF2B ASPM	2.47e-03	169	98	4	EFO_0600056
Disease	blood zinc measurement	SIPA1L3 TRIM45	2.64e-03	23	98	2	EFO_0007584

Protein segments in the cluster

Peptide	Gene	Start	Entry
YNVGHLSIQRVAVWI	VANGL2	261	Q9ULK5
SRQHEVEWQTYQGIL	TMEM62	111	Q0P6H9
VNRVGHDYQWIGLND	VCAN	3216	P13611
GYQAVLQEWEEQHRN	CSGALNACT1	56	Q8TDX6
AGIVTHGYARWQDIQ	CHD5	1746	Q8TDI0
QYSWLIDGNIQQHTQ	CEACAM5	446	P06731
RHVIAWQQGEYGEFV	ETV3	51	P41162
VQQQRIWHLYRVISE	DNHD1	1016	Q96M86
SEQWDYVLVAQRHTQ	ANO9	31	A1A5B4
GDHLVLLNVYTQWAE	DHX16	876	O60231
VNRDLQTHGWLLYQE	DHX29	1261	Q7Z478
RTWTELNVVVYHGSQ	CHD7	1036	Q9P2D1
NYIRQWHSAVVIQAA	ASPM	2526	Q8IZT6
QLRNTQWVHGIVVYT	ATP8A1	256	Q9Y2Q0
IYIQIEHSAIWDQEQ	POLN	281	Q7Z5Q5
TAGQELAWLYQEIRH	NWD1	286	Q149M9
VYWHREGSTQQLQTT	RBM26	601	Q5T8P6
ETYHQRKEGVTHQQW	PAN2	876	Q504Q3
WLAQQEDAHRIVLYQ	PNPLA6	841	Q8IY17
VVHGAEFWSQYRINV	IL11RA	181	Q14626
LDWINGSREYIHAVN	PNLIPRP3	121	Q17RR3
QQDINEGIVWYRHSG	FRAS1	1411	Q86XX4
TEVTREWYQQTHEQQ	MAP1A	2761	P78559
IDVTNIYWHSNVIIE	MIS18BP1	406	Q6P0N0
IYWHSNVIIERIEHN	MIS18BP1	411	Q6P0N0
QFGEVVLEWSRDQYH	GNPTAB	36	Q3T906
LELAQQEYQQLHAVW	WWC1	121	Q8IX03
QVVHWVQSIGLRDYA	PPFIA4	1036	O75335
WQEQLVVGHNVSFDR	POLG	261	P54098
RVNWVVQSSAVDYLH	POLG	1096	P54098
KNDVVQHYWDVLVQA	LAMP2	161	P13473
QVHQIVNNWRDDQYL	MED12	1506	Q93074
NREHLTVWGNANYEI	GDPD1	171	Q8N9F7
RGIQVYIWVLNEEQE	GDPD1	271	Q8N9F7
LDHVYAQWRQQEPET	KMT2B	1536	Q9UMN6
GYNLNDNEWHTVRVV	NRXN1	801	Q9ULB1
RVAGNHTQWYEVNRV	PRSS38	121	A1L453
WIEQYGNVEIINHKT	OSBPL1A	721	Q9BXW6
VVWNIVEYLTQHGLT	FAM13A	61	O94988
HRILVVWKNGQIQYS	NHLRC2	246	Q8NBF2
AVRNTQHLWEIYDQD	PRDM6	291	Q9NQX0
NNRHAYVGIAVIWVL	NPY1R	151	P25929
TVWNVEEHRYGASQE	POMT1	506	Q9Y6A1
HWEGNTVYQEARKIV	PXDNL	991	A1KZ92
VYQDLAQVWAQQIHS	FRG2B	186	Q96QU4
AVYQDLAQVWAQQIH	FRG2C	186	A6NGY1
VYQDLAQVWAQQIHS	FRG2	186	Q64ET8
IVCNHLTGQVWQRYV	DYNC2H1	296	Q8NCM8
EFRTWTDINVVVYHG	CHD9	926	Q3L8U1
RLHQEYGVQGWAIVQ	KDM3A	1221	Q9Y4C1
EIHQDWANREYIEII	BRK1	11	Q8WUW1
HREKIYQQWVAGVDQ	DNAH17	636	Q9UFH2
VVYEEVTNVWINVHD	DPP9	411	Q86TI2
RKAYWQVHLDQVEVA	CTSD	266	P07339
HVTAAYKEVGWVQQV	CYGB	161	Q8WWM9
QAIHVLSGVWVAYQE	CRYBG2	1296	Q8N1P7
ERQTWDQLLLHYQQE	DSN1	221	Q9H410
QWRQGEYKCVVQHTA	IGHD	76	P01880
NEYWVLTAAHVVEGN	C1S	466	P09871
FVGNVTHYAQVWLNI	ABCA2	481	Q9BZC7
WVIALNNYHEVQKVV	DNAH14	2451	Q0VDD8
TGLVRENYVWNVLLH	GBF1	891	Q92538
PEVQFNWYVDGVEVH	IGHG4	151	P01861
WEIYVLQNIEEATQH	CCDC201	166	A0A1B0GTI1
IINHGYARWQDIQND	CHD4	1741	Q14839
WDIEVQNNYRVTVIF	DMBT1	2036	Q9UGM3
HQVNQATVTIQRWYR	CEP131	266	Q9UPN4
EYVINEVIRHDATWG	DCAF15	451	Q66K64
IHLAVVTEINRENYW	KIF2B	41	Q8N4N8
YQVGGQEQVREEVSW	PTPRM	421	P28827
VQQWLEYRVTQVDGH	EEF1E1	71	O43324
NNQIWNIVQEHLYID	TAF5	326	Q15542
VYTVWVCIKEQHVQG	TRIM45	476	Q9H8W5
VSRQGAWKVHTQIDY	SOCS5	351	O75159
TVHYFGLEVDWQQRT	LMF2	331	Q9BU23
EVNRETQQWYTVTHP	SEMA4B	376	Q9NPR2
LEAWQRTYVEVVHQS	PTCH1	396	Q13635
IAWRVVAQDYAQGVE	SIPA1L3	871	O60292
TVEQAQDQHYALVLW	SHLD2	626	Q86V20
GNLQEYLTRHVISWE	TGFBR2	331	P37173
VVNNDHFLYWGDIIQ	ARHGAP5	66	Q13017
HYINDVERGVVWEEV	SKIV2L	426	Q15477
WLYVGTERGNIHIVN	STXBP5	156	Q5T5C0
RVVNNDHFLYWGEVS	ARHGAP35	66	Q9NRY4
IVQSGYFVEENLQHW	ADPRH	206	P54922
VSQDWEHLIRYRNQI	C15orf32	161	Q32M92
GRIQYLNHITRTTQW	SMURF2	171	Q9HAU4
HNSEVVLVRWNEPYQ	TULP4	81	Q9NRJ4
TLHDWYGQEIVELRQ	PHETA2	226	Q6ICB4
AGQWVHVSDTYLQVV	USP45	781	Q70EL2
ATYRVHDEGVWALQV	WDR48	246	Q8TAF3
GVPRDNAWEIQTYVH	TIAM2	801	Q8IVF5
TYQVVELRILTNWGH	SUN2	686	Q9UH99
VEYTVHVWAQKGAQE	TNN	771	Q9UQP3
WEDCQQHRVTVFQYI	SLC27A3	361	Q5K4L6
GRYAEALEQHWQELQ	TONSL	41	Q96HA7
FEVWGLQTRVEQFVH	PITPNC1	191	Q9UKF7
RQYPWGVVQVENENH	SEPTIN8	256	Q92599
IEVHWTVDQQSQYIQ	ROBO1	691	Q9Y6N7
NAHIVEWSPRGEQYV	PAK1IP1	166	Q9NWT1
VYRQQLAFQHQVWDV	WDR4	281	P57081
DNGTVFVVQWDHVYL	PLXDC1	196	Q8IUK5
NVDHVERYDTITNQW	KLHL29	696	Q96CT2
AHVQELYQEWLEGIN	NARF	416	Q9UHQ1
EQEEYQGEGITWHNI	MYO9B	556	Q13459