Cluster composition

Functions

CategoryNameIntersectionWithQueryPValueGenesInTermGenesInQueryGenesInTermInQueryID
GeneOntologyMolecularFunctionsmall GTPase binding

RGPD4 KNTC1 RGPD8 NSF MYO9B VPS4A PIH1D2 RGPD1 DOCK10 AP3M1 INF2 RGPD3

1.09e-0632112812GO:0031267
GeneOntologyMolecularFunctionSUMO transferase activity

RGPD4 RGPD8 RGPD1 MDM2 RGPD3

3.22e-06361285GO:0019789
GeneOntologyMolecularFunctionGTPase binding

RGPD4 KNTC1 RGPD8 NSF MYO9B VPS4A PIH1D2 RGPD1 DOCK10 AP3M1 INF2 RGPD3

3.57e-0636012812GO:0051020
GeneOntologyMolecularFunctionSUMO ligase activity

RGPD4 RGPD8 RGPD1 RGPD3

7.21e-06201284GO:0061665
GeneOntologyMolecularFunctionnucleoside-triphosphatase regulator activity

RGPD4 TBC1D9B GBF1 RGPD8 MYO9B LARS1 RGPD1 DOCK10 MADD RGPD3 DENND2C RGPD5

1.04e-0450712812GO:0060589
GeneOntologyMolecularFunctionGTPase regulator activity

RGPD4 TBC1D9B GBF1 RGPD8 MYO9B LARS1 RGPD1 DOCK10 MADD RGPD3 DENND2C RGPD5

1.04e-0450712812GO:0030695
GeneOntologyMolecularFunctionATP hydrolysis activity

DNAH10 NSF MYO9B VPS4A RSF1 SMARCAD1 DDX6 SUPV3L1 DDX23 ABCG2 MTREX

1.29e-0444112811GO:0016887
GeneOntologyMolecularFunctionphosphatidylethanolamine binding

MAP1LC3A MAP1LC3B2 MAP1LC3B

2.31e-04191283GO:0008429
GeneOntologyMolecularFunctionpeptidyl-prolyl cis-trans isomerase activity

RGPD4 RGPD8 RGPD1 RGPD3

2.95e-04501284GO:0003755
GeneOntologyMolecularFunctioncis-trans isomerase activity

RGPD4 RGPD8 RGPD1 RGPD3

3.70e-04531284GO:0016859
GeneOntologyMolecularFunctionGTPase activator activity

RGPD4 TBC1D9B RGPD8 MYO9B LARS1 RGPD1 RGPD3 RGPD5

4.42e-042791288GO:0005096
GeneOntologyMolecularFunctionhelicase activity

SMARCAD1 DDX6 SUPV3L1 ERCC6L2 DDX23 MTREX

5.47e-041581286GO:0004386
GeneOntologyMolecularFunctionATP-dependent activity

DNAH10 NSF MYO9B VPS4A RSF1 SMARCAD1 DDX6 SUPV3L1 ERCC6L2 DDX23 ABCG2 MTREX

5.94e-0461412812GO:0140657
GeneOntologyMolecularFunctionATP-dependent protein disaggregase activity

NSF VPS4A

6.01e-0461282GO:0140545
GeneOntologyMolecularFunctionubiquitin-like protein ligase activity

RGPD4 MED18 RGPD8 TRIML2 RGPD1 MDM2 FBXO4 RGPD3 UBE3C

1.07e-033981289GO:0061659
GeneOntologyMolecularFunctionubiquitin protein ligase binding

SLF1 USP9X MAP1LC3A MDM2 MAP1LC3B2 MAP1LC3B SNX9 DNAJA1

1.50e-033371288GO:0031625
GeneOntologyMolecularFunctionRNA helicase activity

DDX6 SUPV3L1 DDX23 MTREX

1.59e-03781284GO:0003724
GeneOntologyMolecularFunctionATP-dependent chromatin remodeler activity

RSF1 SMARCAD1 ERCC6L2

1.70e-03371283GO:0140658
GeneOntologyMolecularFunctionATP-dependent activity, acting on RNA

DDX6 SUPV3L1 DDX23 MTREX

1.75e-03801284GO:0008186
GeneOntologyMolecularFunctionATP-dependent protein binding

NSF MYO9B

2.16e-03111282GO:0043008
GeneOntologyMolecularFunctionubiquitin-like protein ligase binding

SLF1 USP9X MAP1LC3A MDM2 MAP1LC3B2 MAP1LC3B SNX9 DNAJA1

2.19e-033581288GO:0044389
GeneOntologyBiologicalProcessprotein localization to organelle

RGPD4 KNTC1 MAN1A1 GBF1 SLF1 RGPD8 VPS4A USP9X CD2AP GNPTAB RGPD1 BBIP1 CEP192 MDM2 MTERF4 TESK1 AP3M1 TAF3 FBXO4 MTOR RGPD3 MTBP AKAP11 DNAJA1 RGPD5

1.24e-08109112825GO:0033365
GeneOntologyBiologicalProcessNLS-bearing protein import into nucleus

RGPD4 RGPD8 RGPD1 RGPD3 RGPD5

1.22e-07201285GO:0006607
GeneOntologyBiologicalProcesspositive regulation of glucokinase activity

RGPD4 RGPD8 RGPD1 RGPD3

1.74e-0791284GO:0033133
GeneOntologyBiologicalProcesspositive regulation of hexokinase activity

RGPD4 RGPD8 RGPD1 RGPD3

2.89e-07101284GO:1903301
GeneOntologyBiologicalProcessregulation of glucokinase activity

RGPD4 RGPD8 RGPD1 RGPD3

9.69e-07131284GO:0033131
GeneOntologyBiologicalProcessregulation of hexokinase activity

RGPD4 RGPD8 RGPD1 RGPD3

1.35e-06141284GO:1903299
GeneOntologyBiologicalProcessprotein-DNA complex organization

FAM47A TET2 KNTC1 MED18 SLF1 GATAD2A RSF1 NAP1L2 FAM47C SMARCAD1 KMT2E RIF1 TAF3 PBRM1 BRD9 ERCC6L2 DDX23 SMARCC2 CBX2

1.29e-0599912819GO:0071824
GeneOntologyBiologicalProcessprotein localization to nucleus

RGPD4 RGPD8 CD2AP RGPD1 MDM2 TESK1 TAF3 FBXO4 MTOR RGPD3 RGPD5

1.63e-0536212811GO:0034504
GeneOntologyBiologicalProcesscellular response to nitrogen levels

MAP1LC3A MAP1LC3B2 MAP1LC3B

4.93e-05121283GO:0043562
GeneOntologyBiologicalProcesscellular response to nitrogen starvation

MAP1LC3A MAP1LC3B2 MAP1LC3B

4.93e-05121283GO:0006995
GeneOntologyBiologicalProcessregulation of gluconeogenesis

RGPD4 RGPD8 RGPD1 RGPD3 GPT2

7.98e-05711285GO:0006111
GeneOntologyBiologicalProcessestablishment of vesicle localization

GBF1 VPS4A PCLO TESK1 AP3M1 MADD AP3M2 UNC13C

7.99e-052241288GO:0051650
GeneOntologyBiologicalProcessprotein peptidyl-prolyl isomerization

RGPD4 RGPD8 RGPD1 RGPD3

8.87e-05381284GO:0000413
GeneOntologyBiologicalProcessestablishment of protein localization to organelle

RGPD4 MAN1A1 RGPD8 VPS4A USP9X GNPTAB RGPD1 MTERF4 AP3M1 RGPD3 DNAJA1 RGPD5

8.89e-0551512812GO:0072594
GeneOntologyBiologicalProcesschromatin organization

FAM47A TET2 SLF1 GATAD2A RSF1 NAP1L2 FAM47C SMARCAD1 KMT2E RIF1 PBRM1 BRD9 ERCC6L2 DDX23 SMARCC2 CBX2

1.38e-0489612816GO:0006325
GeneOntologyBiologicalProcessvesicle localization

GBF1 VPS4A PCLO TESK1 AP3M1 MADD AP3M2 UNC13C

1.57e-042471288GO:0051648
GeneOntologyBiologicalProcessregulation of carbohydrate biosynthetic process

RGPD4 RGPD8 RGPD1 MTOR RGPD3 GPT2

1.76e-041321286GO:0043255
GeneOntologyBiologicalProcessintracellular protein transport

RGPD4 RGPD8 NSF VPS4A USP9X GNPTAB RGPD1 MDM2 AP3M1 RGPD3 AP3M2 SNX9 SNX1 RGPD5

2.06e-0474012814GO:0006886
GeneOntologyBiologicalProcesschromatin remodeling

FAM47A TET2 GATAD2A RSF1 NAP1L2 FAM47C SMARCAD1 KMT2E RIF1 PBRM1 BRD9 ERCC6L2 DDX23 SMARCC2

2.09e-0474112814GO:0006338
GeneOntologyBiologicalProcessanterograde synaptic vesicle transport

AP3M1 MADD AP3M2

3.30e-04221283GO:0048490
GeneOntologyBiologicalProcesssynaptic vesicle cytoskeletal transport

AP3M1 MADD AP3M2

3.30e-04221283GO:0099514
GeneOntologyBiologicalProcesssynaptic vesicle transport along microtubule

AP3M1 MADD AP3M2

3.30e-04221283GO:0099517
GeneOntologyBiologicalProcesspeptidyl-proline modification

RGPD4 RGPD8 RGPD1 RGPD3

3.52e-04541284GO:0018208
GeneOntologyBiologicalProcesstraversing start control point of mitotic cell cycle

MDM2 MTBP

3.77e-0451282GO:0007089
GeneOntologyBiologicalProcessregulation of small molecule metabolic process

RGPD4 RGPD8 RGPD1 SLC7A7 TWIST1 MTOR RGPD3 NR1H2 GPT2 PID1

3.82e-0443412810GO:0062012
GeneOntologyBiologicalProcesscellular response to amino acid starvation

LARS1 MAP1LC3A MAP3K5 MTOR

4.05e-04561284GO:0034198
GeneOntologyCellularComponentcytoplasmic periphery of the nuclear pore complex

RGPD4 RGPD8 RGPD1 RGPD3

9.81e-0881304GO:1990723
GeneOntologyCellularComponentnuclear inclusion body

RGPD4 SLF1 RGPD8 RGPD1 RGPD3

1.24e-07201305GO:0042405
GeneOntologyCellularComponentSUMO ligase complex

RGPD4 SLF1 RGPD8 RGPD1 RGPD3

1.62e-07211305GO:0106068
GeneOntologyCellularComponentnuclear pore cytoplasmic filaments

RGPD4 RGPD8 RGPD1 RGPD3

2.91e-07101304GO:0044614
GeneOntologyCellularComponentannulate lamellae

RGPD4 RGPD8 RGPD1 RGPD3

1.36e-06141304GO:0005642
GeneOntologyCellularComponentnuclear pore nuclear basket

RGPD4 RGPD8 RGPD1 RGPD3

4.08e-06181304GO:0044615
GeneOntologyCellularComponentchromatin

FAM47A SLF1 GATAD2A RSF1 NAP1L2 GON4L FAM47C SMARCAD1 CAMTA2 POU6F1 KMT2E DDX6 TWIST1 RIF1 PBRM1 BRD9 NHLH1 NHLH2 DDX23 SMARCC2 MTBP NR1H2 CBX2 CREB3L2

1.29e-05148013024GO:0000785
GeneOntologyCellularComponentATPase complex

GATAD2A VPS4A RSF1 GON4L PBRM1 BRD9 SMARCC2

1.63e-051291307GO:1904949
GeneOntologyCellularComponentSWI/SNF superfamily-type complex

GATAD2A RSF1 GON4L PBRM1 BRD9 SMARCC2

3.02e-05961306GO:0070603
GeneOntologyCellularComponentnuclear pore

RGPD4 RGPD8 VPS4A RGPD1 RGPD3 RGPD5

4.03e-051011306GO:0005643
GeneOntologyCellularComponentperinuclear region of cytoplasm

RGPD4 GALNT2 RGPD8 MYO9B VPS4A PCLO CD2AP RGPD1 SEC31A TESK1 DDX6 INF2 RGPD3 DNAJA1 SNX1 MYO16 CREB3L2

6.88e-0593413017GO:0048471
GeneOntologyCellularComponentcytoplasmic region

DNAH10 PCLO CKAP5 AP3M1 MADD STAU1 MAP1LC3B2 AP3M2 UNC13C MAP1LC3B

8.66e-0536013010GO:0099568
GeneOntologyCellularComponentautolysosome

MAP1LC3A MAP1LC3B2 MAP1LC3B

1.79e-04181303GO:0044754
GeneOntologyCellularComponentinclusion body

RGPD4 SLF1 RGPD8 RGPD1 RGPD3

2.48e-04901305GO:0016234
GeneOntologyCellularComponentnuclear protein-containing complex

RGPD4 MED18 GATAD2A RGPD8 VPS4A RSF1 RGPD1 GON4L KMT2E TAF3 PBRM1 RGPD3 BRD9 DDX23 SMARCC2 NR1H2 MTREX CBX2 RGPD5 SYMPK

3.27e-04137713020GO:0140513
GeneOntologyCellularComponentsecondary lysosome

MAP1LC3A MAP1LC3B2 MAP1LC3B

5.50e-04261303GO:0005767
GeneOntologyCellularComponentneuron projection cytoplasm

CKAP5 AP3M1 MADD STAU1 AP3M2

6.25e-041101305GO:0120111
GeneOntologyCellularComponentplasma membrane bounded cell projection cytoplasm

DNAH10 CKAP5 AP3M1 MADD STAU1 MAP1LC3B2 AP3M2 MAP1LC3B

8.40e-043171308GO:0032838
GeneOntologyCellularComponentSWI/SNF complex

PBRM1 BRD9 SMARCC2

8.44e-04301303GO:0016514
GeneOntologyCellularComponentvacuolar membrane

DNAJC13 NSF VPS4A PI4K2A MAP1LC3A AP3M1 MAP1LC3B2 MTOR SLC15A4 MAP1LC3B

1.28e-0350713010GO:0005774
GeneOntologyCellularComponentnuclear envelope

RGPD4 RGPD8 VPS4A CD2AP RGPD1 RIF1 TAF3 MTOR RGPD3 RGPD5

2.65e-0356013010GO:0005635
GeneOntologyCellularComponentdendrite

NSF FAT3 PCLO CD2AP PI4K2A CKAP5 DOCK10 STAU1 DIP2A MAP1LC3B2 MTOR MAP1LC3B SNX1

2.69e-0385813013GO:0030425
GeneOntologyCellularComponentdendritic tree

NSF FAT3 PCLO CD2AP PI4K2A CKAP5 DOCK10 STAU1 DIP2A MAP1LC3B2 MTOR MAP1LC3B SNX1

2.74e-0386013013GO:0097447
GeneOntologyCellularComponentAP-3 adaptor complex

AP3M1 AP3M2

2.86e-03131302GO:0030123
GeneOntologyCellularComponentcentrosome

SLF1 VPS4A USP9X CD2AP MAMLD1 CKAP5 CEP192 KMT2E TESK1 EYS ERCC6L2 AKAP11

3.12e-0377013012GO:0005813
GeneOntologyCellularComponentcondensed chromosome

KNTC1 SLF1 CKAP5 RIF1 PBRM1 SMARCC2 MTBP

3.13e-033071307GO:0000793
MousePhenoelevated level of mitotic sister chromatid exchange

RGPD4 RGPD8 RGPD1 RGPD3

4.37e-06161014MP:0003701
MousePhenoabnormal morula morphology

RGPD4 RGPD8 RGPD1 RGPD3

3.40e-05261014MP:0012058
MousePhenodecreased tumor latency

RGPD4 RGPD8 RGPD1 RGPD3

6.09e-05301014MP:0010308
MousePhenofailure of blastocyst formation

RGPD4 RGPD8 RGPD1 RGPD3

6.95e-05311014MP:0012129
MousePhenoincreased sarcoma incidence

RGPD4 RGPD8 RGPD1 MDM2 FBXO4 RGPD3

9.42e-051021016MP:0002032
MousePhenoabnormal tumor latency

RGPD4 RGPD8 RGPD1 RGPD3

1.01e-04341014MP:0010307
MousePhenoincreased hepatocellular carcinoma incidence

RGPD4 RGPD8 RGPD1 FBXO4 RGPD3

1.49e-04701015MP:0003331
MousePhenoabnormal blastocyst formation

RGPD4 RGPD8 RGPD1 RGPD3

1.74e-04391014MP:0012128
DomainGrip

RGPD4 RGPD8 RGPD1 RGPD3 RGPD5

6.25e-09111285SM00755
DomainGRIP

RGPD4 RGPD8 RGPD1 RGPD3 RGPD5

6.25e-09111285PF01465
DomainRan_BP1

RGPD4 RGPD8 RGPD1 RGPD3 RGPD5

1.07e-08121285PF00638
DomainRANBD1

RGPD4 RGPD8 RGPD1 RGPD3 RGPD5

1.07e-08121285PS50196
DomainGRIP_dom

RGPD4 RGPD8 RGPD1 RGPD3 RGPD5

1.07e-08121285IPR000237
DomainGRIP

RGPD4 RGPD8 RGPD1 RGPD3 RGPD5

1.07e-08121285PS50913
DomainRanBD

RGPD4 RGPD8 RGPD1 RGPD3 RGPD5

1.72e-08131285SM00160
DomainRan_bind_dom

RGPD4 RGPD8 RGPD1 RGPD3 RGPD5

1.72e-08131285IPR000156
DomainRab_bind

RGPD4 RGPD8 RGPD1 RGPD3

7.25e-0871284PF16704
DomainGCC2_Rab_bind

RGPD4 RGPD8 RGPD1 RGPD3

7.25e-0871284IPR032023
Domain-

RGPD4 RGPD8 RGPD1 RGPD3

4.28e-071012841.10.220.60
DomainAtg8

MAP1LC3A MAP1LC3B2 MAP1LC3B

1.72e-0581283PF02991
DomainAtg8-like

MAP1LC3A MAP1LC3B2 MAP1LC3B

1.72e-0581283IPR004241
DomainTwist-related

TWIST2 TWIST1

4.66e-0521282IPR015789
DomainHelicase_C

SMARCAD1 DDX6 SUPV3L1 ERCC6L2 DDX23 MTREX

9.46e-051071286PF00271
DomainHELICc

SMARCAD1 DDX6 SUPV3L1 ERCC6L2 DDX23 MTREX

9.46e-051071286SM00490
DomainHelicase_C

SMARCAD1 DDX6 SUPV3L1 ERCC6L2 DDX23 MTREX

9.96e-051081286IPR001650
DomainHELICASE_CTER

SMARCAD1 DDX6 SUPV3L1 ERCC6L2 DDX23 MTREX

1.05e-041091286PS51194
DomainHELICASE_ATP_BIND_1

SMARCAD1 DDX6 SUPV3L1 ERCC6L2 DDX23 MTREX

1.05e-041091286PS51192
DomainLAM_G_DOMAIN

CNTNAP3B FAT3 CNTNAP3 EYS

1.30e-04381284PS50025
DomainLaminin_G_2

CNTNAP3B FAT3 CNTNAP3 EYS

1.59e-04401284PF02210
DomainLamG

CNTNAP3B FAT3 CNTNAP3 EYS

2.31e-04441284SM00282
DomainFAM47

FAM47A FAM47C

2.77e-0441282PF14642
DomainFAM47

FAM47A FAM47C

2.77e-0441282IPR032743
DomainDMAP_binding

GNPTAB DIP2A

4.60e-0451282PF06464
DomainLaminin_G

CNTNAP3B FAT3 CNTNAP3 EYS

6.71e-04581284IPR001791
DomainClathrin_mu_CS

AP3M1 AP3M2

6.87e-0461282IPR018240
DomainCLAT_ADAPTOR_M_1

AP3M1 AP3M2

6.87e-0461282PS00990
DomainCLAT_ADAPTOR_M_2

AP3M1 AP3M2

6.87e-0461282PS00991
DomainDMAP1-bd

GNPTAB DIP2A

6.87e-0461282IPR010506
DomainDMAP_binding

GNPTAB DIP2A

6.87e-0461282SM01137
DomainPH_dom-like

RGPD4 RGPD8 RGPD1 DOCK10 MTMR10 FRMD4A RGPD3 PLCH1 PID1 RGPD5

7.11e-0442612810IPR011993
DomainDEXDc

SMARCAD1 DDX6 ERCC6L2 DDX23 MTREX

9.24e-041091285SM00487
DomainHelicase_ATP-bd

SMARCAD1 DDX6 ERCC6L2 DDX23 MTREX

9.63e-041101285IPR014001
DomainTPR_REGION

RGPD4 RGPD8 DNAH10 RGPD1 RGPD3 RGPD5

9.69e-041651286PS50293
DomainTPR

RGPD4 RGPD8 DNAH10 RGPD1 RGPD3 RGPD5

9.69e-041651286PS50005
Domain-

RGPD4 RGPD8 RGPD1 DOCK10 MTMR10 FRMD4A RGPD3 PLCH1 PID1

1.50e-0339112892.30.29.30
DomainClathrin_mu

AP3M1 AP3M2

2.02e-03101282IPR001392
DomainC2

PCLO UNC13C PLCH1 FER1L5 CCDC33

2.09e-031311285PF00168
DomainIQ

MYO9B CAMTA2 UBE3C MYO16

2.33e-03811284SM00015
DomainARM-type_fold

DNAJC13 GBF1 USP9X CKAP5 RIF1 INF2 MTOR SYMPK

2.35e-033391288IPR016024
DomainAdap_comp_sub

AP3M1 AP3M2

2.46e-03111282PF00928
DomainC2

PCLO UNC13C PLCH1 FER1L5 CCDC33

2.54e-031371285SM00239
DomainARM-like

DNAJC13 USP9X CKAP5 DOCK10 RIF1 MTOR SYMPK

2.61e-032701287IPR011989
DomainClathrin_sm-chain_CS

AP3M1 AP3M2

2.94e-03121282IPR000804
DomainC2

PCLO UNC13C PLCH1 FER1L5 CCDC33

2.96e-031421285PS50004
DomainIQ_motif_EF-hand-BS

MYO9B CAMTA2 UBE3C MYO16

3.41e-03901284IPR000048
DomainMHD

AP3M1 AP3M2

3.46e-03131282PS51072
DomainMHD

AP3M1 AP3M2

3.46e-03131282IPR028565
Domain-

PCLO UNC13C PLCH1 FER1L5 CCDC33

3.54e-0314812852.60.40.150
DomainTPR-contain_dom

RGPD4 RGPD8 RGPD1 RGPD3 RGPD5

3.75e-031501285IPR013026
DomainIQ

MYO9B CAMTA2 UBE3C MYO16

3.84e-03931284PS50096
DomainuDENN

MADD DENND2C

4.02e-03141282SM00800
Domain-

DNAJC13 USP9X CKAP5 RIF1 MTOR SYMPK

4.30e-0322212861.25.10.10
DomainuDENN

MADD DENND2C

4.62e-03151282PF03456
DomainDENN

MADD DENND2C

5.25e-03161282SM00799
DomainAP_mu_sigma_su

AP3M1 AP3M2

5.25e-03161282IPR022775
DomainDENN

MADD DENND2C

5.25e-03161282PF02141
DomaindDENN

MADD DENND2C

5.25e-03161282PF03455
DomainClat_adaptor_s

AP3M1 AP3M2

5.25e-03161282PF01217
DomainUDENN

MADD DENND2C

5.25e-03161282PS50946
DomainDDENN

MADD DENND2C

5.25e-03161282PS50947
DomaindDENN

MADD DENND2C

5.25e-03161282SM00801
DomaindDENN_dom

MADD DENND2C

5.25e-03161282IPR005112
DomainuDENN_dom

MADD DENND2C

5.25e-03161282IPR005113
DomainDENN

MADD DENND2C

5.25e-03161282PS50211
DomainDENN_dom

MADD DENND2C

5.25e-03161282IPR001194
DomainTPR-like_helical_dom

RGPD4 RGPD8 RGPD1 MTOR RGPD3 RGPD5

5.42e-032331286IPR011990
DomainC2_dom

PCLO UNC13C PLCH1 FER1L5 CCDC33

5.46e-031641285IPR000008
DomainP-loop_NTPase

DNAH10 NSF MYO9B VPS4A SMARCAD1 GFM2 DDX6 SUPV3L1 ERCC6L2 DDX23 ABCG2 MTREX MYO16

5.47e-0384812813IPR027417
DomainPI3_PI4_kinase

PI4K2A MTOR

6.64e-03181282PF00454
DomainPI3_4_KINASE_1

PI4K2A MTOR

6.64e-03181282PS00915
DomainPI3_4_KINASE_2

PI4K2A MTOR

6.64e-03181282PS00916
DomainPI3/4_kinase_cat_dom

PI4K2A MTOR

6.64e-03181282IPR000403
DomainPI3_4_KINASE_3

PI4K2A MTOR

6.64e-03181282PS50290
Domain-

TWIST2 TWIST1 NHLH1 NHLH2

6.73e-0310912844.10.280.10
PathwayBIOCARTA_RANBP2_PATHWAY

RGPD4 RGPD8 RGPD1 MDM2 RGPD3

1.11e-0718975MM1549
PathwayKEGG_MEDICUS_REFERENCE_AUTOPHAGOSOME_AND_LYSOSOME_FUSION_TETHERING_FACTOR_GRASP55

MAP1LC3A MAP1LC3B2 MAP1LC3B

6.22e-066973M47979
PathwayREACTOME_SUMOYLATION_OF_UBIQUITINYLATION_PROTEINS

RGPD4 RGPD8 RGPD1 MDM2 RGPD3

1.70e-0547975MM14939
PathwayREACTOME_TRANSPORT_OF_MATURE_MRNAS_DERIVED_FROM_INTRONLESS_TRANSCRIPTS

RGPD4 RGPD8 RGPD1 RGPD3 SYMPK

2.31e-0550975MM14610
PathwayKEGG_MEDICUS_REFERENCE_TBK1_MEDIATED_AUTOPHAGOSOME_FORMATION

MAP1LC3A MAP1LC3B2 MAP1LC3B

3.66e-0510973M47745
PathwayREACTOME_SUMOYLATION_OF_RNA_BINDING_PROTEINS

RGPD4 RGPD8 RGPD1 RGPD3 CBX2

4.77e-0558975MM15149
PathwayREACTOME_AMPLIFICATION_OF_SIGNAL_FROM_THE_KINETOCHORES

RGPD4 KNTC1 RGPD8 RGPD1 CKAP5 RGPD3

6.43e-05100976MM14561
PathwayREACTOME_RECEPTOR_MEDIATED_MITOPHAGY

MAP1LC3A MAP1LC3B2 MAP1LC3B

6.64e-0512973MM15525
PathwayREACTOME_SUMOYLATION_OF_CHROMATIN_ORGANIZATION_PROTEINS

RGPD4 RGPD8 RGPD1 RGPD3 CBX2

8.29e-0565975MM15147
PathwayKEGG_MEDICUS_REFERENCE_AUTOPHAGY_VESICLE_NUCLEATION_ELONGATION_MATURATION_LC3_II_FORMATION

MAP1LC3A MAP1LC3B2 MAP1LC3B

8.59e-0513973M47458
PathwayKEGG_MEDICUS_VARIANT_MUTATION_INACTIVATED_P62_TO_PINK_PARKIN_MEDIATED_AUTOPHAGOSOME_FORMATION

MAP1LC3A MAP1LC3B2 MAP1LC3B

8.59e-0513973M47744
PathwayKEGG_MEDICUS_REFERENCE_AUTOPHAGY_VESICLE_NUCLEATION_ELONGATION_MATURATION_SEQUESTOSOME_1_LIKE_RECEPTOR

MAP1LC3A MAP1LC3B2 MAP1LC3B

1.09e-0414973M47975
PathwayWP_COMPREHENSIVE_IL17A_SIGNALING

MAP1LC3A SAMHD1 MAP1LC3B2 MTOR MAP1LC3B PLCH1

1.09e-04110976MM16642
PathwayREACTOME_MITOTIC_SPINDLE_CHECKPOINT

RGPD4 KNTC1 RGPD8 RGPD1 CKAP5 RGPD3

1.54e-04117976MM15387
PathwayREACTOME_NUCLEAR_PORE_COMPLEX_NPC_DISASSEMBLY

RGPD4 RGPD8 RGPD1 RGPD3

1.59e-0440974MM14945
PathwayREACTOME_SUMOYLATION

RGPD4 RGPD8 RGPD1 MDM2 RGPD3 NR1H2 CBX2

1.63e-04169977MM14919
PathwayKEGG_MEDICUS_REFERENCE_AUTOPHAGOSOME_AND_LYSOSOME_FUSION_TETHERING_FACTOR

MAP1LC3A MAP1LC3B2 MAP1LC3B

1.66e-0416973M47978
PathwayREACTOME_TRANSCRIPTIONAL_REGULATION_BY_SMALL_RNAS

RGPD4 RGPD8 RGPD1 RGPD3

1.75e-0441974MM15200
PathwayREACTOME_SUMOYLATION_OF_SUMOYLATION_PROTEINS

RGPD4 RGPD8 RGPD1 RGPD3

1.93e-0442974MM15039
PathwayKEGG_MEDICUS_REFERENCE_PINK_PARKIN_MEDIATED_AUTOPHAGOSOME_FORMATION

MAP1LC3A MAP1LC3B2 MAP1LC3B

2.00e-0417973M47742
PathwayREACTOME_TRANSPORT_OF_THE_SLBP_DEPENDANT_MATURE_MRNA

RGPD4 RGPD8 RGPD1 RGPD3

2.12e-0443974MM14609
PathwayREACTOME_RESOLUTION_OF_SISTER_CHROMATID_COHESION

RGPD4 KNTC1 RGPD8 RGPD1 CKAP5 RGPD3

2.61e-04129976MM14894
PathwayREACTOME_SUMOYLATION_OF_DNA_DAMAGE_RESPONSE_AND_REPAIR_PROTEINS

RGPD4 RGPD8 RGPD1 RGPD3 CBX2

2.79e-0484975MM14929
PathwayREACTOME_TRANSPORT_OF_MATURE_TRANSCRIPT_TO_CYTOPLASM

RGPD4 RGPD8 RGPD1 RGPD3 SYMPK

3.12e-0486975MM15413
PathwayREACTOME_GENE_SILENCING_BY_RNA

RGPD4 RGPD8 RGPD1 RGPD3

3.52e-0449974MM14837
PathwayREACTOME_SUMOYLATION_OF_DNA_REPLICATION_PROTEINS

RGPD4 RGPD8 RGPD1 RGPD3

4.11e-0451974MM15151
PathwayREACTOME_RHO_GTPASES_ACTIVATE_FORMINS

RGPD4 KNTC1 RGPD8 RGPD1 CKAP5 RGPD3

4.22e-04141976MM15266
PathwayREACTOME_CELLULAR_RESPONSE_TO_HEAT_STRESS

RGPD4 RGPD8 RGPD1 MTOR RGPD3

4.26e-0492975MM14951
PathwayREACTOME_MITOTIC_PROMETAPHASE

RGPD4 KNTC1 RGPD8 RGPD1 CKAP5 CEP192 RGPD3

4.83e-04202977MM15362
PathwayREACTOME_NUCLEAR_ENVELOPE_BREAKDOWN

RGPD4 RGPD8 RGPD1 RGPD3

5.49e-0455974MM14917
PathwayREACTOME_SNRNP_ASSEMBLY

RGPD4 RGPD8 RGPD1 RGPD3

6.72e-0458974MM14736
PathwayWP_HDAC6_INTERACTIONS_IN_THE_CENTRAL_NERVOUS_SYSTEM

BBIP1 MAP1LC3A MAP3K5 TWIST1 DNAJA1

1.09e-03113975M48336
PathwayWP_MECHANISMS_ASSOCIATED_WITH_PLURIPOTENCY

GATAD2A ICAM1 SMARCAD1 MDM2 TWIST1 RIF1 PBRM1 MTOR

1.10e-03301978MM15983
PathwayREACTOME_MITOTIC_METAPHASE_AND_ANAPHASE

RGPD4 KNTC1 RGPD8 VPS4A RGPD1 CKAP5 RGPD3

1.15e-03234977MM14898
PathwayWP_CAMKK2_PATHWAY

ICAM1 MAP1LC3A MTOR

1.48e-0333973M40047
PathwayREACTOME_REGULATION_OF_HSF1_MEDIATED_HEAT_SHOCK_RESPONSE

RGPD4 RGPD8 RGPD1 RGPD3

1.59e-0373974MM14948
PathwayREACTOME_RUNX1_INTERACTS_WITH_CO_FACTORS_WHOSE_PRECISE_EFFECT_ON_RUNX1_TARGETS_IS_NOT_KNOWN

PBRM1 SMARCC2 CBX2

1.62e-0334973MM15531
PathwayREACTOME_PINK1_PRKN_MEDIATED_MITOPHAGY

MAP1LC3A MAP1LC3B2 MAP1LC3B

1.62e-0334973MM15167
Pubmed

Proximity labeling of endogenous RICTOR identifies mTOR complex 2 regulation by ADP ribosylation factor ARF1.

RGPD4 RGPD8 CD2AP RGPD1 CKAP5 SMARCAD1 PBRM1 WIZ WDR75 MTOR RGPD3 BRD9 RGPD5

2.04e-122151311335973513
Pubmed

Complex genomic rearrangements lead to novel primate gene function.

RGPD4 RGPD8 RGPD1 RGPD3 RGPD5

1.47e-117131515710750
Pubmed

The Hsp70-Hsp90 co-chaperone Hop/Stip1 shifts the proteostatic balance from folding towards degradation.

DNAJC13 GBF1 NSF USP9X LARS1 CKAP5 SAMHD1 SEC31A DDX6 STAU1 RIF1 WDR75 MTOR UBE3C MTREX DNAJA1 SYMPK

3.30e-106381311733239621
Pubmed

The ubiquitin ligase Uhrf2 is a master regulator of cholesterol biosynthesis and is essential for liver regeneration.

RGPD4 RGPD8 RSF1 RGPD1 RIF1 WIZ RGPD3 CBX2

1.35e-0986131837253089
Pubmed

Gain of Additional BIRC3 Protein Functions through 3'-UTR-Mediated Protein Complex Formation.

KNTC1 GBF1 DNAH10 NSF VPS4A USP9X PCLO LARS1 CKAP5 SAMHD1 SMARCAD1 SEC31A TESK1 DDX6 STAU1 RIF1 PBRM1 WDR75 MTOR SUPV3L1 UBE3C MTREX DNAJA1

3.65e-0914251312330948266
Pubmed

Interconversion of red opsin isoforms by the cyclophilin-related chaperone protein Ran-binding protein 2.

RGPD4 RGPD8 RGPD1 RGPD3

6.67e-09713149037092
Pubmed

Genomic organization, expression, and localization of murine Ran-binding protein 2 (RanBP2) gene.

RGPD4 RGPD8 RGPD1 RGPD3

6.67e-097131411353387
Pubmed

Microglial activation in an amyotrophic lateral sclerosis-like model caused by Ranbp2 loss and nucleocytoplasmic transport impairment in retinal ganglion neurons.

RGPD4 RGPD8 RGPD1 RGPD3

6.67e-097131430944974
Pubmed

Nucleoporin Nup358 drives the differentiation of myeloid-biased multipotent progenitors by modulating HDAC3 nuclear translocation.

RGPD4 RGPD8 RGPD1 RGPD3

6.67e-097131438838144
Pubmed

Retina-specifically expressed novel subtypes of bovine cyclophilin.

RGPD4 RGPD8 RGPD1 RGPD3

6.67e-09713147559465
Pubmed

Mst1, RanBP2 and eIF4G are new markers for in vivo PI3K activation in murine and human prostate.

RGPD4 RGPD8 RGPD1 RGPD3

6.67e-097131417372272
Pubmed

Proteostatic Remodeling of Small Heat Shock Chaperones─Crystallins by Ran-Binding Protein 2─and the Peptidyl-Prolyl cis-trans Isomerase and Chaperone Activities of Its Cyclophilin Domain.

RGPD4 RGPD8 RGPD1 RGPD3

6.67e-097131438657106
Pubmed

Nup358, a nucleoporin, functions as a key determinant of the nuclear pore complex structure remodeling during skeletal myogenesis.

RGPD4 RGPD8 RGPD1 RGPD3

6.67e-097131421205196
Pubmed

Haploinsufficiency of RanBP2 is neuroprotective against light-elicited and age-dependent degeneration of photoreceptor neurons.

RGPD4 RGPD8 RGPD1 RGPD3

6.67e-097131418949001
Pubmed

Selective impairment of a subset of Ran-GTP-binding domains of ran-binding protein 2 (Ranbp2) suffices to recapitulate the degeneration of the retinal pigment epithelium (RPE) triggered by Ranbp2 ablation.

RGPD4 RGPD8 RGPD1 RGPD3

6.67e-097131425187515
Pubmed

Localization of the Ran-GTP binding protein RanBP2 at the cytoplasmic side of the nuclear pore complex.

RGPD4 RGPD8 RGPD1 RGPD3

6.67e-09713148603673
Pubmed

Uncoupling phototoxicity-elicited neural dysmorphology and death by insidious function and selective impairment of Ran-binding protein 2 (Ranbp2).

RGPD4 RGPD8 RGPD1 RGPD3

6.67e-097131426632511
Pubmed

Differential loss of prolyl isomerase or chaperone activity of Ran-binding protein 2 (Ranbp2) unveils distinct physiological roles of its cyclophilin domain in proteostasis.

RGPD4 RGPD8 RGPD1 RGPD3

6.67e-097131424403063
Pubmed

Distinct and atypical intrinsic and extrinsic cell death pathways between photoreceptor cell types upon specific ablation of Ranbp2 in cone photoreceptors.

RGPD4 RGPD8 RGPD1 RGPD3

6.67e-097131423818861
Pubmed

Kinesin-1 and mitochondrial motility control by discrimination of structurally equivalent but distinct subdomains in Ran-GTP-binding domains of Ran-binding protein 2.

RGPD4 RGPD8 RGPD1 RGPD3

6.67e-097131423536549
Pubmed

Identification of RanBP2- and kinesin-mediated transport pathways with restricted neuronal and subcellular localization.

RGPD4 RGPD8 RGPD1 RGPD3

6.67e-097131412191015
Pubmed

Ranbp2 haploinsufficiency mediates distinct cellular and biochemical phenotypes in brain and retinal dopaminergic and glia cells elicited by the Parkinsonian neurotoxin, 1-methyl-4-phenyl-1,2,3,6-tetrahydropyridine (MPTP).

RGPD4 RGPD8 RGPD1 RGPD3

6.67e-097131422821000
Pubmed

Neuroprotection resulting from insufficiency of RANBP2 is associated with the modulation of protein and lipid homeostasis of functionally diverse but linked pathways in response to oxidative stress.

RGPD4 RGPD8 RGPD1 RGPD3

6.67e-097131420682751
Pubmed

The nucleoporin RanBP2 tethers the cAMP effector Epac1 and inhibits its catalytic activity.

RGPD4 RGPD8 RGPD1 RGPD3

1.33e-088131421670213
Pubmed

Critical role of RanBP2-mediated SUMOylation of Small Heterodimer Partner in maintaining bile acid homeostasis.

RGPD4 RGPD8 RGPD1 RGPD3

1.33e-088131427412403
Pubmed

Mice lacking Ran binding protein 1 are viable and show male infertility.

RGPD4 RGPD8 RGPD1 RGPD3

1.33e-088131421310149
Pubmed

The distribution of phosphorylated SR proteins and alternative splicing are regulated by RANBP2.

RGPD4 RGPD8 RGPD1 RGPD3

1.33e-088131422262462
Pubmed

Zap70 and downstream RanBP2 are required for the exact timing of the meiotic cell cycle in oocytes.

RGPD4 RGPD8 RGPD1 RGPD3

1.33e-088131428745977
Pubmed

Human transcription factor protein interaction networks.

TET2 SLF1 GATAD2A DNAH10 USP9X LARS1 RGPD1 GON4L CEP192 MDM2 STAU1 RIF1 TAF3 PBRM1 WIZ BRD9 NHLH1 SMARCC2 DNAJA1 MRPL1 CBX2 SYMPK

1.94e-0814291312235140242
Pubmed

Resolution of sister centromeres requires RanBP2-mediated SUMOylation of topoisomerase IIalpha.

RGPD4 RGPD8 RGPD1 RGPD3

2.39e-089131418394993
Pubmed

Loss of Ranbp2 in motoneurons causes disruption of nucleocytoplasmic and chemokine signaling, proteostasis of hnRNPH3 and Mmp28, and development of amyotrophic lateral sclerosis-like syndromes.

RGPD4 RGPD8 RGPD1 RGPD3

2.39e-089131428100513
Pubmed

Association of the kinesin-binding domain of RanBP2 to KIF5B and KIF5C determines mitochondria localization and function.

RGPD4 RGPD8 RGPD1 RGPD3

2.39e-089131417887960
Pubmed

The docking of kinesins, KIF5B and KIF5C, to Ran-binding protein 2 (RanBP2) is mediated via a novel RanBP2 domain.

RGPD4 RGPD8 RGPD1 RGPD3

2.39e-089131411553612
Pubmed

The zinc finger cluster domain of RanBP2 is a specific docking site for the nuclear export factor, exportin-1.

RGPD4 RGPD8 RGPD1 RGPD3

2.39e-089131410601307
Pubmed

The cyclophilin-like domain mediates the association of Ran-binding protein 2 with subunits of the 19 S regulatory complex of the proteasome.

RGPD4 RGPD8 RGPD1 RGPD3

2.39e-08913149733766
Pubmed

Impairments in age-dependent ubiquitin proteostasis and structural integrity of selective neurons by uncoupling Ran GTPase from the Ran-binding domain 3 of Ranbp2 and identification of novel mitochondrial isoforms of ubiquitin-conjugating enzyme E2I (ubc9) and Ranbp2.

RGPD4 RGPD8 RGPD1 RGPD3

2.39e-089131428877029
Pubmed

The RanBP2/RanGAP1*SUMO1/Ubc9 SUMO E3 ligase is a disassembly machine for Crm1-dependent nuclear export complexes.

RGPD4 RGPD8 RGPD1 RGPD3

3.97e-0810131427160050
Pubmed

Parkin ubiquitinates and promotes the degradation of RanBP2.

RGPD4 RGPD8 RGPD1 RGPD3

3.97e-0810131416332688
Pubmed

Cyclophilin-related protein RanBP2 acts as chaperone for red/green opsin.

RGPD4 RGPD8 RGPD1 RGPD3

3.97e-081013148857542
Pubmed

Ran-dependent docking of importin-beta to RanBP2/Nup358 filaments is essential for protein import and cell viability.

RGPD4 RGPD8 RGPD1 RGPD3

3.97e-0810131421859863
Pubmed

Identification and functional characterization of transcriptional activators in human cells.

TET2 KNTC1 GATAD2A PCLO GON4L PBRM1 WIZ BRD9 SMARCC2 SNX9 DNAJA1 SNX1

3.99e-083981311235016035
Pubmed

Developmental expression of LC3alpha and beta: absence of fibronectin or autophagy phenotype in LC3beta knockout mice.

MAP1LC3A MAP1LC3B2 MAP1LC3B

5.22e-083131318069693
Pubmed

Microtubule-Associated Protein 1 Light Chain 3 (LC3) Isoforms in RPE and Retina.

MAP1LC3A MAP1LC3B2 MAP1LC3B

5.22e-083131329721994
Pubmed

Pacer Is a Mediator of mTORC1 and GSK3-TIP60 Signaling in Regulation of Autophagosome Maturation and Lipid Metabolism.

MAP1LC3A MAP1LC3B2 MTOR MAP1LC3B

6.22e-0811131430704899
Pubmed

RanBP2 modulates Cox11 and hexokinase I activities and haploinsufficiency of RanBP2 causes deficits in glucose metabolism.

RGPD4 RGPD8 RGPD1 RGPD3

6.22e-0811131417069463
Pubmed

An Rtn4/Nogo-A-interacting micropeptide modulates synaptic plasticity with age.

RGPD4 RGPD8 RGPD1 RGPD3

6.22e-0811131435771867
Pubmed

T-cell receptor (TCR) signaling promotes the assembly of RanBP2/RanGAP1-SUMO1/Ubc9 nuclear pore subcomplex via PKC-θ-mediated phosphorylation of RanGAP1.

RGPD4 RGPD8 RGPD1 RGPD3

6.22e-0811131434110283
Pubmed

Multiple roles of integrin-α3 at the neuromuscular junction.

PCLO MAP1LC3A MAP1LC3B2 MAP1LC3B

9.30e-0812131428386022
Pubmed

Systematic identification of factors for provirus silencing in embryonic stem cells.

RGPD4 GATAD2A RGPD8 USP9X RGPD1 SMARCAD1 RIF1 RGPD3

1.28e-07153131826365490
Pubmed

Ankyrin-G induces nucleoporin Nup358 to associate with the axon initial segment of neurons.

RGPD4 RGPD8 RGPD1 RGPD3

1.34e-0713131431427429
Pubmed

Spatiotemporal profile of postsynaptic interactomes integrates components of complex brain disorders.

RGPD4 DNAJC13 RGPD8 NSF USP9X RGPD1 CKAP5 SEC31A MAP3K5 PBRM1 WIZ SSH1 GPR158 MTOR RGPD3 SMARCC2 DNAJA1

1.40e-079631311728671696
Pubmed

Transcription factor Foxp3 and its protein partners form a complex regulatory network.

RGPD4 GATAD2A RGPD8 CD2AP RGPD1 CKAP5 RIF1 WIZ WDR75 RGPD3 SMARCC2

1.73e-073701311122922362
Pubmed

Proteomic profiling of VCP substrates links VCP to K6-linked ubiquitylation and c-Myc function.

DNAJC13 GATAD2A MYO9B VPS4A RSF1 LARS1 CKAP5 DOCK10 SMARCAD1 SEC31A DDX6 STAU1 RIF1 WDR75 INF2 SUPV3L1 DDX23 SMARCC2 MTREX DNAJA1

1.78e-0713531312029467282
Pubmed

Protein phosphatase 4 maintains the survival of primordial follicles by regulating autophagy in oocytes.

MAP1LC3A MAP1LC3B2 MTOR MAP1LC3B

1.87e-0714131439245708
Pubmed

Functional proteomics establishes the interaction of SIRT7 with chromatin remodeling complexes and expands its role in regulation of RNA polymerase I transcription.

USP9X RSF1 CKAP5 STAU1 RIF1 PBRM1 WDR75 MTOR DDX23 SMARCC2 MTREX SNX9 DNAJA1 SYMPK

1.92e-076531311422586326
Pubmed

TWIST1 and chromatin regulatory proteins interact to guide neural crest cell differentiation.

TWIST1 STAU1 FRMD4A RIF1 PBRM1 WIZ CBX2

1.98e-07109131733554859
Pubmed

The Hedgehog signalling pathway regulates autophagy.

MAP1LC3A MAP1LC3B2 MAP1LC3B

2.08e-074131323149744
Pubmed

The Contribution of Melanoregulin to Microtubule-Associated Protein 1 Light Chain 3 (LC3) Associated Phagocytosis in Retinal Pigment Epithelium.

MAP1LC3A MAP1LC3B2 MAP1LC3B

2.08e-074131325301234
Pubmed

Acetylation modulates LC3 stability and cargo recognition.

MAP1LC3A MAP1LC3B2 MAP1LC3B

2.08e-074131330633346
Pubmed

Autophagic compartments gain access to the MHC class II compartments in thymic epithelium.

MAP1LC3A MAP1LC3B2 MAP1LC3B

2.08e-074131319915056
Pubmed

Limited expression of nuclear pore membrane glycoprotein 210 in cell lines and tissues suggests cell-type specific nuclear pores in metazoans.

RGPD4 RGPD8 RGPD1 RGPD3

2.54e-0715131414697343
Pubmed

Identifying biological pathways that underlie primordial short stature using network analysis.

GALNT2 GATAD2A NSF MYO9B USP9X LARS1 CKAP5 DDX6 STAU1 RIF1 PBRM1 WDR75 DDX23 SMARCC2 MTREX SNX9 DNAJA1

3.31e-0710241311724711643
Pubmed

CREG1 promotes lysosomal biogenesis and function.

MAP1LC3A MAP1LC3B2 MAP1LC3B SNX1

3.38e-0716131433966596
Pubmed

Direct interaction between hnRNP-M and CDC5L/PLRG1 proteins affects alternative splice site choice.

DNAJC13 NSF CKAP5 SMARCAD1 DDX6 RIF1 WIZ SUPV3L1 DDX23 SMARCC2 MTREX DNAJA1 SYMPK

3.39e-075821311320467437
Pubmed

Systematic analysis of human protein complexes identifies chromosome segregation proteins.

RGPD4 KNTC1 RGPD8 CD2AP ICAM1 RGPD1 CKAP5 CEP192 DDX6 PBRM1 INF2 RGPD3 DDX23 SMARCC2 ABCG2 DNAJA1 CREB3L2 RGPD5

3.64e-0711551311820360068
Pubmed

The TIP60 Complex Is a Conserved Coactivator of HIF1A.

GBF1 NSF MYO9B SAMHD1 MTOR UBE3C DNAJA1

3.82e-07120131727320910
Pubmed

Human CLEC16A regulates autophagy through modulating mTOR activity.

MAP1LC3A MTOR MAP1LC3B

5.19e-075131328223137
Pubmed

Autophagy restricts HIV-1 infection by selectively degrading Tat in CD4+ T lymphocytes.

MAP1LC3A MTOR MAP1LC3B

5.19e-075131325339774
Pubmed

Autophagy-related gene Atg5 is essential for astrocyte differentiation in the developing mouse cortex.

MAP1LC3A MAP1LC3B2 MAP1LC3B

5.19e-075131325227738
Pubmed

Proximity-dependent biotin identification (BioID) reveals a dynamic LSD1-CoREST interactome during embryonic stem cell differentiation.

RGPD4 EHBP1 TET2 DNAJC13 RGPD8 TRIML2 CD2AP RGPD1 CKAP5 WIZ RGPD3

5.79e-074181311134709266
Pubmed

A Global Analysis of the Receptor Tyrosine Kinase-Protein Phosphatase Interactome.

DNAJC13 GBF1 TRIML2 DOCK10 MTMR10 DIP2A EYS SSH1 MTBP PID1 CBX2

6.06e-074201311128065597
Pubmed

Interactome Rewiring Following Pharmacological Targeting of BET Bromodomains.

GATAD2A MYO9B RSF1 MAP3K5 RIF1 TAF3 PBRM1 BRD9 DDX23 SMARCC2 PLCH1 SNX9

9.03e-075331311230554943
Pubmed

Autophagy appears during the development of the mouse lower first molar.

MAP1LC3A MAP1LC3B2 MAP1LC3B

1.04e-066131323052835
Pubmed

Autophagy proteins regulate the secretory component of osteoclastic bone resorption.

MAP1LC3A MAP1LC3B2 MAP1LC3B

1.04e-066131322055344
Pubmed

Oct4 links multiple epigenetic pathways to the pluripotency network.

DNAJC13 GATAD2A CKAP5 RIF1 PBRM1 SMARCC2 DNAJA1 SYMPK

1.10e-06203131822083510
Pubmed

C9orf72 protein quality control by UBR5-mediated heterotypic ubiquitin chains.

RGPD4 GBF1 RGPD8 NSF VPS4A USP9X LARS1 RGPD1 SAMHD1 AP3M1 DDX6 RIF1 WDR75 RGPD3 DDX23 UBE3C DNAJA1 RGPD5

1.23e-0612571311837317656
Pubmed

Terminal differentiation of cortical neurons rapidly remodels RanGAP-mediated nuclear transport system.

RGPD4 RGPD8 RGPD1 RGPD3

1.33e-0622131427717094
Pubmed

SAMM50 acts with p62 in piecemeal basal- and OXPHOS-induced mitophagy of SAM and MICOS components.

MAP1LC3A MAP1LC3B2 MTOR MAP1LC3B

1.33e-0622131434037656
Pubmed

A direct physical interaction between Nanog and Sox2 regulates embryonic stem cell self-renewal.

RGPD4 GATAD2A RGPD8 RGPD1 WIZ RGPD3 DNAJA1

1.44e-06146131723892456
Pubmed

Chr21 protein-protein interactions: enrichment in proteins involved in intellectual disability, autism, and late-onset Alzheimer's disease.

TET2 LARP6 GALNT2 USP9X GNPTAB LARS1 CKAP5 NAP1L2 SMARCAD1 SEC31A MTMR10 MADD DIP2A WIZ SUPV3L1 NR1H2 DNAJA1 SNX1

1.67e-0612851311835914814
Pubmed

The mouse APG10 homologue, an E2-like enzyme for Apg12p conjugation, facilitates MAP-LC3 modification.

MAP1LC3A MAP1LC3B2 MAP1LC3B

1.81e-067131312890687
Pubmed

A protein-interaction network of interferon-stimulated genes extends the innate immune system landscape.

KNTC1 TBC1D9B GALNT2 NSF VPS4A MRPL30 LARS1 SAMHD1 GFM2 DDX6 STAU1 INF2 MTOR DDX23 UBE3C MTREX SNX9 DNAJA1 MRPL1

2.02e-0614401311930833792
Pubmed

Targeted ubiquitination and degradation of G-protein-coupled receptor kinase 5 by the DDB1-CUL4 ubiquitin ligase complex.

MYO9B USP9X CKAP5 AP3M1 MADD AP3M2 MTREX

2.24e-06156131722952844
Pubmed

Multilevel proteomics reveals host perturbations by SARS-CoV-2 and SARS-CoV.

CNTNAP3B GBF1 NSF SLC26A2 USP9X CNTNAP3 PI4K2A SEC31A MDM2 LRRC8D MTFR1L RIF1 SLC15A4 UBE3C SNX1 SYMPK

2.62e-0610611311633845483
Pubmed

WDR76 Co-Localizes with Heterochromatin Related Proteins and Rapidly Responds to DNA Damage.

GATAD2A CD2AP LARS1 GON4L RIF1 PBRM1 WIZ DDX23 SMARCC2 DNAJA1

2.66e-063941311027248496
Pubmed

LMBR1L regulates lymphopoiesis through Wnt/β-catenin signaling.

TBC1D9B MAN1A1 GALNT2 NSF VPS4A USP9X LARS1 SAMHD1 SEC31A AP3M1 INF2 MTOR SNX9 DNAJA1 SYMPK

2.85e-069421311531073040
Pubmed

Mass spectrometry proteomics reveals a function for mammalian CALCOCO1 in MTOR-regulated selective autophagy.

MAP1LC3A MTOR MAP1LC3B

2.88e-068131331971854
Pubmed

Essential role for GABARAP autophagy proteins in interferon-inducible GTPase-mediated host defense.

MAP1LC3A MAP1LC3B2 MAP1LC3B

2.88e-068131328604719
Pubmed

BioID-based intact cell interactome of the Kv1.3 potassium channel identifies a Kv1.3-STAT3-p53 cellular signaling pathway.

EHBP1 NSF USP9X CD2AP LARS1 CKAP5 SEC31A AP3M1 DDX6 STAU1 PLCH1 SNX9 DNAJA1

2.97e-067081311339231216
Pubmed

USP7 targets XIAP for cancer progression: Establishment of a p53-independent therapeutic avenue for glioma.

RGPD8 FAT3 GON4L STAU1 PBRM1 SMARCC2 MTREX PLCH1

3.17e-06234131836243803
Pubmed

An Oct4-centered protein interaction network in embryonic stem cells.

MED18 GATAD2A USP9X RIF1 PBRM1 WIZ SMARCC2

3.51e-06167131720362541
Pubmed

Two-Dimensional Fractionation Method for Proteome-Wide Cross-Linking Mass Spectrometry Analysis.

KNTC1 GATAD2A USP9X MRPL30 LARS1 CKAP5 MTERF4 DDX6 TWIST1 PBRM1 SLC4A1AP DDX23 SMARCC2 DNAJA1

4.09e-068471311435235311
Pubmed

Destabilization of TP53 by USP10 is essential for neonatal autophagy and survival.

MAP1LC3A MDM2 MAP1LC3B2 MAP1LC3B

4.24e-0629131436198274
Pubmed

Ambra1 regulates autophagy and development of the nervous system.

MAP1LC3A MAP1LC3B2 MAP1LC3B

4.31e-069131317589504
Pubmed

Autophagy mediates degradation of nuclear lamina.

MAP1LC3A MAP1LC3B2 MAP1LC3B

4.31e-069131326524528
Pubmed

Developmental regulation of MURF ubiquitin ligases and autophagy proteins nbr1, p62/SQSTM1 and LC3 during cardiac myofibril assembly and turnover.

MAP1LC3A MAP1LC3B2 MAP1LC3B

4.31e-069131321185285
Pubmed

Proteomic analyses reveal distinct chromatin-associated and soluble transcription factor complexes.

GBF1 GATAD2A NSF MYO9B LARS1 CKAP5 SMARCAD1 MDM2 TWIST1 RIF1 WIZ SMARCC2 SNX9 SYMPK

4.67e-068571311425609649
Pubmed

Identification of SUMO Binding Proteins Enriched after Covalent Photo-Cross-Linking.

USP9X LARS1 CKAP5 SAMHD1 SMARCAD1 RIF1 PBRM1 DNAJA1 SYMPK

5.03e-06332131932786267
Pubmed

Interactions of the Antiviral Factor Interferon Gamma-Inducible Protein 16 (IFI16) Mediate Immune Signaling and Herpes Simplex Virus-1 Immunosuppression.

RGPD8 CKAP5 STAU1 PBRM1 WDR75 INF2 RGPD3 SMARCC2 MTREX

5.03e-06332131925693804
Pubmed

A protein interaction landscape of breast cancer.

GBF1 NSF USP9X ICAM1 SMARCAD1 SEC31A MDM2 STAU1 BRD9 SMARCC2 UBE3C MTREX

5.37e-066341311234591612
InteractionRGPD4 interactions

RGPD4 RGPD8 RGPD1 RGPD3 RGPD5

2.49e-07221305int:RGPD4
InteractionRICTOR interactions

RGPD4 MAN1A1 RGPD8 NSF USP9X CD2AP LARS1 RGPD1 CKAP5 SMARCAD1 SEC31A PBRM1 WIZ WDR75 INF2 MTOR RGPD3 BRD9 RGPD5

4.16e-0775913019int:RICTOR
InteractionRGPD1 interactions

RGPD4 RGPD8 RGPD1 PBRM1 RGPD3 RGPD5

7.15e-07491306int:RGPD1
InteractionRGPD2 interactions

RGPD4 RGPD8 RGPD1 RGPD3 RGPD5

7.45e-07271305int:RGPD2
InteractionDPPA4 interactions

NSF USP9X PCLO MAP1LC3A PBRM1 SMARCC2 MAP1LC3B SNX9

3.53e-061401308int:DPPA4
InteractionYY1 interactions

GON4L SMARCAD1 KMT2E MDM2 TESK1 DDX6 TWIST1 RIF1 TAF3 PBRM1 WIZ MTOR NR1H2

7.76e-0645413013int:YY1
InteractionRGPD8 interactions

RGPD4 RGPD8 RGPD1 INF2 RGPD3 RGPD5

8.30e-06741306int:RGPD8
InteractionRGPD3 interactions

RGPD4 RGPD8 RGPD1 RGPD3 RGPD5

1.28e-05471305int:RGPD3
InteractionTWIST1 interactions

TWIST2 TWIST1 STAU1 FRMD4A RIF1 PBRM1 WIZ CBX2

1.47e-051701308int:TWIST1
InteractionRABL6 interactions

GBF1 GATAD2A SLC34A2 MDM2 AP3M1 SMARCC2 MAP1LC3B

2.16e-051301307int:RABL6
InteractionSTIP1 interactions

DNAJC13 GBF1 TRIML2 NSF USP9X LARS1 CKAP5 SAMHD1 SEC31A DDX6 STAU1 RIF1 WDR75 MTOR SMARCC2 UBE3C MTREX DNAJA1 SYMPK

2.45e-05100613019int:STIP1
InteractionZBTB46 interactions

GATAD2A WIZ DDX23 RGPD5

3.46e-05291304int:ZBTB46
InteractionFOXG1 interactions

GBF1 MYO9B RIF1 WIZ SNX9 SYMPK

3.49e-05951306int:FOXG1
InteractionIGF1R interactions

EHBP1 DNAH10 USP9X SEC31A MDM2 MAP3K5 SSH1 INF2 MTOR SNX9 DNAJA1 SNX1

5.07e-0546713012int:IGF1R
InteractionRAB3GAP2 interactions

GBF1 GATAD2A MAP1LC3A SMARCAD1 STAU1 SMARCC2 MAP1LC3B

5.88e-051521307int:RAB3GAP2
InteractionBRD7 interactions

MYO9B RGPD1 CKAP5 SAMHD1 DDX6 TWIST1 STAU1 RIF1 PBRM1 BRD9 NHLH1 SMARCC2 UBE3C DNAJA1

6.45e-0563713014int:BRD7
InteractionPSMC5 interactions

GBF1 RGPD8 CD2AP SAMHD1 MDM2 MAP3K5 SLC4A1AP MTOR SMARCC2 UBE3C DNAJA1 RGPD5

7.14e-0548413012int:PSMC5
InteractionYWHAH interactions

EHBP1 TET2 GBF1 CD2AP CKAP5 CEP192 TESK1 MTMR10 MADD DDX6 MAP3K5 FRMD4A SSH1 MTOR DENND2C MTBP AKAP11 MTREX PLCH1

8.36e-05110213019int:YWHAH
InteractionBRD3 interactions

GATAD2A MYO9B RSF1 MAP3K5 RIF1 TAF3 PBRM1 WIZ BRD9 SMARCC2 MAP1LC3B PLCH1

8.66e-0549413012int:BRD3
InteractionSIRT7 interactions

USP9X RSF1 CKAP5 MDM2 STAU1 RIF1 PBRM1 WDR75 MTOR DDX23 SMARCC2 MTREX SNX9 DNAJA1 SYMPK

9.21e-0574413015int:SIRT7
InteractionSOX2 interactions

TET2 DNAJC13 GATAD2A NSF MYO9B USP9X GNPTAB LARS1 CKAP5 TWIST1 STAU1 FRMD4A PBRM1 WIZ SUPV3L1 SMARCC2 AKAP11 MTREX PLCH1 DNAJA1 MRPL1 CBX2

1.08e-04142213022int:SOX2
InteractionBRD9 interactions

MAP1LC3A STAU1 PBRM1 BRD9 SMARCC2 MAP1LC3B

1.12e-041171306int:BRD9
InteractionBIRC3 interactions

KNTC1 DNAH10 NSF VPS4A USP9X LARS1 CKAP5 SAMHD1 SMARCAD1 SEC31A TESK1 DDX6 STAU1 RIF1 PBRM1 WDR75 MTOR SUPV3L1 UBE3C MTREX DNAJA1

1.24e-04133413021int:BIRC3
InteractionHIF1A interactions

GBF1 NSF MYO9B USP9X ICAM1 SAMHD1 MDM2 TWIST1 MTOR UBE3C DNAJA1

1.37e-0444113011int:HIF1A
InteractionHDAC2 interactions

TET2 MED18 DNAJC13 GATAD2A NSF LARS1 SAMHD1 SMARCAD1 MDM2 TWIST1 WIZ INF2 SMARCC2 PLCH1 DNAJA1 SYMPK

1.44e-0486513016int:HDAC2
InteractionH2AZ1 interactions

GATAD2A RSF1 MDM2 RIF1 PBRM1 WIZ DDX23 SMARCC2 AKAP11 CBX2

1.49e-0437113010int:H2AZ1
InteractionZNF330 interactions

GATAD2A RSF1 SMARCAD1 STAU1 TAF3 PBRM1 WIZ SLC4A1AP SMARCC2 CCDC33 CBX2

1.51e-0444613011int:ZNF330
InteractionGRK5 interactions

MYO9B USP9X CKAP5 AP3M1 MADD AP3M2 MTREX

1.81e-041821307int:GRK5
InteractionNPIPB6 interactions

RGPD8 RGPD1 RGPD5

1.99e-04181303int:NPIPB6
InteractionSIRT6 interactions

RGPD8 USP9X FAT3 MDM2 DDX6 STAU1 PBRM1 WIZ SMARCC2 MTREX SNX9 RGPD5 SYMPK

2.14e-0462813013int:SIRT6
GeneFamilyTetratricopeptide repeat domain containing|Bardet-Biedl syndrome associated|BBSome

RGPD4 RGPD8 RGPD1 RGPD3 RGPD5

2.09e-04115855769
GeneFamilyAutophagy related

MAP1LC3A MAP1LC3B2 MAP1LC3B

4.94e-04338531022
GeneFamilyX-linked mental retardation|RNA helicases

SUPV3L1 MTREX

1.17e-03118521168
GeneFamilySorting nexins|PX-BAR domain containing

SNX9 SNX1

1.40e-03128521290
GeneFamilyBasic helix-loop-helix proteins

TWIST2 TWIST1 NHLH1 NHLH2

1.80e-03110854420
CoexpressionNAKAYA_PBMC_FLUARIX_FLUVIRIN_AGE_18_50YO_CORRELATED_WITH_HAI_28DY_RESPONSE_AT_7DY_NEGATIVE

RGPD4 EHBP1 RGPD8 TIGD1 RGPD1 BBIP1 GON4L SAMHD1 RIF1 WDR75 SUPV3L1 RGPD3 SNX9 RGPD5

1.18e-0747413114M40991
CoexpressionHAMAI_APOPTOSIS_VIA_TRAIL_UP

KNTC1 DNAJC13 SLF1 USP9X GNPTAB RSF1 DOCK10 SMARCAD1 CEP192 RIF1 PBRM1 DTWD1 SLC4A1AP AKAP11 MTREX DNAJA1

1.90e-0765613116M18979
CoexpressionGAUSSMANN_MLL_AF4_FUSION_TARGETS_B_UP

RGPD4 RGPD8 USP9X RGPD1 RGPD3

6.13e-07331315MM477
CoexpressionGSE1791_CTRL_VS_NEUROMEDINU_IN_T_CELL_LINE_6H_UP

NSF USP9X MAMLD1 LRRC8D STAU1 ERCC6L2 SNX9 PID1 CREB3L2

7.14e-071981319M6166
CoexpressionGSE43863_NAIVE_VS_TFH_CD4_EFF_TCELL_D6_LCMV_UP

GALNT2 LARS1 MTERF4 LRRC8D TWIST1 UBE3C FAM118B CREB3L2

6.94e-061971318M9725
CoexpressionGSE12507_PDC_CELL_LINE_VS_IMMATUE_T_CELL_LINE_UP

LARS1 CKAP5 CEP192 MDM2 FBXO4 MTBP MTREX

1.23e-051531317M438
CoexpressionHOUNKPE_HOUSEKEEPING_GENES

RGPD4 DNAJC13 GBF1 RGPD8 LARS1 RGPD1 SEC31A AP3M1 MTFR1L STAU1 SLC4A1AP MTOR RGPD3 DDX23 UBE3C DNAJA1 C14orf119 SNX1

1.90e-05115813118MM1338
CoexpressionGSE27241_WT_VS_RORGT_KO_TH17_POLARIZED_CD4_TCELL_TREATED_WITH_DIGOXIN_UP

TET2 KNTC1 GBF1 MYO9B USP9X CKAP5 RIF1

3.50e-051801317M8239
CoexpressionTABULA_MURIS_SENIS_TRACHEA_GRANULOCYTE_AGEING

RGPD4 RGPD8 RGPD1 RGPD3

6.32e-05431314MM3857
CoexpressionGSE29618_PRE_VS_DAY7_POST_TIV_FLU_VACCINE_PDC_UP

LARP6 MADD INF2 PAH AKAP11 NR1H2 CBX2

6.81e-052001317M5003
CoexpressionGSE17721_LPS_VS_GARDIQUIMOD_6H_BMDC_UP

DNAJC13 SLF1 GATAD2A ICAM1 NAP1L2 SAMHD1 MTOR

6.81e-052001317M4050
ToppCellfrontal_cortex|World / Per Region, Lineage, Cell class, Cell type, Cell subtype

MAN1A1 DNAH10 FAT3 EFCAB13 TWIST2 PLCH1 PID1

3.44e-071521317f9c29d4568402ca07a717dbffb3ccc7f35c5fe56
ToppCellAnterior_Cingulate_gyrus_(CgG)-Neuronal-Glutamatergic_Excit-Glut_C-D_(RORB)-Glut_D_(IT_RORB_THEMIS_LINC00507)_2|Anterior_Cingulate_gyrus_(CgG) / Sample groups (6 Anatomical region groups), with 5 level hierarchy of cell types

FAT3 MAMLD1 TWIST2 CCDC168 UNC13C RXFP1 PLCH1

9.95e-0717813170e1bedf991189d0ef9b40dac9281bdf4739333a1
ToppCellfacs-Thymus-Thymus_Epithelium-18m-Lymphocytic-thymocyte|Thymus / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation

STAB2 DNAH10 FAT3 PCLO UNC13C PLCH1 MYO16

1.24e-0618413172cbed6462fea2622871bb7e49b0df3d984239281
ToppCellfacs-Thymus-Thymus_Epithelium-18m-Lymphocytic|Thymus / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation

STAB2 DNAH10 FAT3 PCLO UNC13C PLCH1 MYO16

1.24e-061841317ea7a7e2bac46d4d2c31a5d576b38a032b5335062
ToppCellfacs-Thymus-Thymus_Epithelium-18m-Lymphocytic-proliferating_thymocyte;_DN_to_DP_transition,_dividing_(some_are_Cd8+/_Cd4+,_some_undergoing_VDJ_recombination)|Thymus / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation

STAB2 DNAH10 FAT3 PCLO UNC13C PLCH1 MYO16

1.24e-0618413172b19a8c5f823e00812908b23e66bb4e563278aff
ToppCellAnterior_Cingulate_gyrus_(CgG)-Neuronal-Glutamatergic_Excit-Glut_C-D_(RORB)-Glut_D_(IT_RORB_THEMIS_LINC00507)_4|Anterior_Cingulate_gyrus_(CgG) / Sample groups (6 Anatomical region groups), with 5 level hierarchy of cell types

FAT3 ASIC5 UNC13C RXFP1 PLCH1 PID1

1.16e-051711316f648789e6aefe508bb748401bf9b3cd830fb0ddf
ToppCellPrimary_Motor_Cortex_(M1)-Neuronal-Glutamatergic_Excit-Glut_C-D_(RORB)-Glut_D_(IT_RORB_THEMIS_LINC00507)_2|Primary_Motor_Cortex_(M1) / Sample groups (6 Anatomical region groups), with 5 level hierarchy of cell types

FAT3 CCDC168 TWIST1 PAH UNC13C PLCH1

1.51e-0517913168766a5a066091879f521acfc612abf563ff78808
ToppCellwk_08-11-Mesenchymal-Fibroblast-Mesenchymal_2|wk_08-11 / Celltypes from embryonic and fetal-stage human lung

CNTNAP3 NAP1L2 TWIST2 TWIST1 PID1 MYO16

1.61e-0518113169b2d207dc9fc2228a1555ed360286bb7c2d988ff
ToppCelldroplet-Marrow-nan-3m|Marrow / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation

CD2AP RSF1 DOCK10 DDX6 DDX23 SNX9

1.76e-0518413161154a5ad7b8512272b7476f949ddac350910bfb7
ToppCellCOVID-19_Severe-gd_T|COVID-19_Severe / Disease condition and Cell class

MAN1A1 DNAH10 MYO9B GNPTAB DIP2A SLC15A4

1.76e-051841316791f1bcb954aadc63d4117c400537d036f68734d
ToppCellFetal_29-31_weeks-Mesenchymal-matrix_fibroblast_1_cell-D088|Fetal_29-31_weeks / Lineage, Cell type, age group and donor

GALNT2 FAT3 MAMLD1 FRMD4A SSH1 MYO16

2.18e-05191131608720998aa55131d7377c4c67c4c935865bd7d79
ToppCellLA-14._Fibroblast_III|LA / Chamber and Cluster_Paper

MAN1A1 GALNT2 ICAM1 TWIST2 CCDC181 PID1

2.31e-0519313167426c291bac59e539c427bcaae18abc7d397d44e
ToppCellHippocampus-Neuronal|Hippocampus / BrainAtlas - Mouse McCarroll V32

NSF PCLO NAP1L2 MADD GPR158 AKAP11

2.38e-0519413168aeb347b3024354c9505f4f0fddf0b843489dc6b
ToppCellLA-14._Fibroblast_III|World / Chamber and Cluster_Paper

MAN1A1 GALNT2 ICAM1 TWIST2 CCDC181 PID1

2.38e-051941316803fa83ceada17c38ca9f933b888f7e7b0b90761
ToppCell(04)_Interm._basal>secr.-(2)_GFP_FOXI1|(04)_Interm._basal>secr. / shred by cell type by condition

SLC26A2 CD2AP RSF1 SEC31A KMT2E MDM2

2.74e-05199131653ca3861f9e00dab3f3fbefb0837857ee39ab084
ToppCellSmart-start-Cell-Wel_seq-Non-neoplastic-Myeloid-Mono-Mono_hypoxia-F|Smart-start-Cell-Wel_seq / Platform, Oncotype, Lineage, Cell_class, celltype (level4), mutation group

MAMLD1 PI4K2A FRMD4A NR1H2 SNX9 ERICH6

2.82e-05200131688d713dfc792e7609bf7ecfb28f87cb748088570
ToppCellPBMC_fresh-frozen-Mild-Moderate_progression_d02_child-Lymphocytic-Lymphocytic_T-mature_alpha-beta_T_cell-T_CD8_c01-LEF1|Mild-Moderate_progression_d02_child / Compartment, severity and other cell annotations on 10x 3' data (130k)

DOCK10 POU6F1 MTERF4 FRMD4A BRD9

3.18e-051231315511b7c20a4a85e49980936d52af7dbca19bb848e
DiseaseSaethre-Chotzen syndrome (implicated_via_orthology)

TWIST2 TWIST1

1.75e-0521242DOID:14768 (implicated_via_orthology)
Diseaseresponse to steroid, systemic lupus erythematosus, idiopathic osteonecrosis of the femoral head

FRMD4A MYO16

1.05e-0441242EFO_0020976, EFO_1001930, MONDO_0007915
Diseasealcohol use disorder (implicated_via_orthology)

MADD PBRM1 SSH1 BRD9 SMARCC2 UNC13C

1.80e-041951246DOID:1574 (implicated_via_orthology)
Diseasecyclic AMP-dependent transcription factor ATF-6 alpha measurement

GALNT2 TTC41P

2.60e-0461242EFO_0801505
DiseaseHeadache, fasting blood glucose measurement

GATAD2A UBE3C

3.63e-0471242EFO_0004465, HP_0002315
Diseasetype 2 diabetes mellitus (biomarker_via_orthology)

ICAM1 MAP1LC3A MTOR ABCG2 GPT2

4.01e-041471245DOID:9352 (biomarker_via_orthology)
Diseaseautosomal recessive intellectual developmental disorder (implicated_via_orthology)

CNTNAP3B CNTNAP3

4.82e-0481242DOID:0060308 (implicated_via_orthology)
Diseasetransient cerebral ischemia (biomarker_via_orthology)

ICAM1 MAP1LC3A MADD MAP3K5 MTOR

5.41e-041571245DOID:224 (biomarker_via_orthology)
DiseaseInherited focal segmental glomerulosclerosis

CD2AP INF2

7.71e-04101242cv:CN327126
DiseaseFocal segmental glomerulosclerosis

CD2AP INF2

7.71e-04101242cv:C0017668
DiseaseHereditary Nephrotic Syndromes, Autosomal Dominant

CD2AP INF2

9.40e-04111242cv:CN043612
Diseasemultiple sclerosis symptom measurement

STAB2 DNAH10 UNC13C

9.64e-04461243EFO_0803536
Diseasecoffee consumption measurement

EHBP1 TET2 EYS ABCG2 CCDC33

1.05e-031821245EFO_0006781
Diseaseacute myeloid leukemia (is_marker_for)

TET2 MDM2 ABCG2

1.16e-03491243DOID:9119 (is_marker_for)
DiseaseFamilial idiopathic steroid-resistant nephrotic syndrome

CD2AP INF2

1.33e-03131242cv:C4273714
Diseaseputamen volume change measurement

TAF3 MYO16

1.33e-03131242EFO_0021495
Diseasehuman papilloma virus infection, oropharynx cancer

SLC7A7 UNC13C MYO16

1.46e-03531243EFO_0001668, EFO_1001931
Diseaseobsolete_red blood cell distribution width

EHBP1 DNAJC13 GALNT2 GATAD2A MYO9B CD2AP MRPL30 RGPD1 SAMHD1 FRMD4A PBRM1 GPR158 BRD9 MYO16

1.60e-03134712414EFO_0005192
Diseaseapolipoprotein B measurement

EHBP1 DNAJC13 GALNT2 DNAH10 EFCAB13 SLC4A1AP SERPINA10 FAM118B SYMPK

1.99e-036631249EFO_0004615
DiseaseSchizoaffective disorder-bipolar type

STAB2 PCLO

2.02e-03161242EFO_0009965
Diseasecyclic adenosine monophosphate measurement

MAN1A1 ABCG2

2.29e-03171242EFO_0010473
Diseaselow density lipoprotein cholesterol measurement, body fat percentage

DNAH10 EFCAB13

2.29e-03171242EFO_0004611, EFO_0007800
Diseasemean corpuscular hemoglobin concentration

KNTC1 DNAJC13 GALNT2 GATAD2A MYO9B MRPL30 GON4L POU6F1 MDM2 RIF1 UBE3C MYO16

2.43e-03110512412EFO_0004528
DiseaseGlobal developmental delay

NSF KMT2E DDX6 SMARCC2

2.44e-031331244C0557874
Diseasefactor VIII measurement, Ischemic stroke

STAB2 TWIST1

2.86e-03191242EFO_0004630, HP_0002140
DiseaseIntellectual Disability

NSF GON4L KMT2E DDX6 MTOR SMARCC2 GPT2

2.88e-034471247C3714756
Diseaseend stage renal disease (implicated_via_orthology)

CD2AP MTOR

3.17e-03201242DOID:783 (implicated_via_orthology)
Diseaseadiponectin measurement

KNTC1 DNAH10 FRMD4A PBRM1

3.41e-031461244EFO_0004502
Diseasechronic myeloid leukemia (is_implicated_in)

MDM2 ABCG2

3.49e-03211242DOID:8552 (is_implicated_in)
Diseaseelectroencephalogram measurement

FAM47A SLC7A7 MYO16

3.78e-03741243EFO_0004357
Diseasestem Cell Growth Factor beta measurement

STAB2 MAN1A1 TTC41P

3.92e-03751243EFO_0008292

Protein segments in the cluster

PeptideGeneStartEntry
TILPPVEKLKTVLQK

GPT2

496

Q8TD30
EQIKTKPPKAELIAI

ERICH6

311

Q7L0X2
LKLPPKDLRIKTSDV

DDX6

76

P26196
LDKKPLKPIRDVISL

CNTNAP3

196

Q9BZ76
LKKVAPLEAKLIKDP

CXorf58

81

Q96LI9
ALPTLDPKILDKKLR

CCDC33

581

Q8N5R6
DKPLEKPLKLVLKVG

BRD9

21

Q9H8M2
KSLPDLEILKKPISE

FBXO4

116

Q9UKT5
PSKQDKPLIEKLAEI

ABCG2

321

Q9UNQ0
LKIFLPKKLLECLPR

CAMTA2

16

O94983
QKSLKAKLELPKIPV

AKAP11

326

Q9UKA4
TEEKKPEKPLILQSL

CD2AP

236

Q9Y5K6
ESNILKELIKPPTIL

AP3M1

126

Q9Y2T2
PDKLSLLEKLLPERK

DNAJA1

336

P31689
KEELLLLQTPIPRKL

CPXCR1

86

Q8N123
PLIKKYDEPILKLLT

NAP1L2

256

Q9ULW6
LPLLKIIKKNSIPEP

RGPD5

611

Q99666
LPLLKIIKKNSIPEP

RGPD8

611

O14715
EKQLPVLDKTKFLVP

MAP1LC3B

41

Q9GZQ8
ESNILKELIKPPTIL

AP3M2

126

P53677
ALRKQLEKTLLEIPP

GATAD2A

351

Q86YP4
LLQVLKPLDPERKLE

FAM47C

146

Q5HY64
PSPLLEKKIQLLEAK

PBRM1

1301

Q86U86
LPEPESLELKKHLKQ

MADD

416

Q8WXG6
ALILIVILEKPKPAE

EYS

2691

Q5T1H1
EEVKIPLVNISLLPK

GNPTAB

691

Q3T906
NSEPKIKKLEPVLLP

MTMR10

26

Q9NXD2
PLVLPIAKQDSLLEK

MYO16

346

Q9Y6X6
LTPLEVKKLPVLETN

MYO16

1511

Q9Y6X6
KLLISKTPVLPERAK

GPR158

1086

Q5T848
ELPSKDLPKTLLKTL

KIAA2026

916

Q5HYC2
QLPEGLEKKPIVLKF

KIAA1109

2966

Q2LD37
KKSPPHLIKEIILVD

GALNT2

161

Q10471
SKLNVLTLKKEPLPA

PID1

51

Q7Z2X4
SALQEKKPLPEEKKL

PCLO

1206

Q9Y6V0
LDITPKSAQKLKPVL

POU6F1

191

Q14863
KILKSAKDLPPDALI

KMT2E

341

Q8IZD2
KPPDEELIKKLVDQI

LARP6

86

Q9BRS8
KVLAPELIPSILEKF

KNTC1

726

P50748
EERLLALKKPALPAL

MTFR1L

111

Q9H019
LVLQALLVLLKKAPP

NSF

621

P46459
KPKAQPLSLEELLAK

DDX23

136

Q9BUQ8
VLKQLLKLLPEKHEI

INF2

671

Q27J81
KPKLLPLELEKTAIQ

PAH

361

P00439
EQLKPLVHLEKIDPK

MED18

191

Q9BUE0
KDLILPKISDPNFVK

PI4K2A

381

Q9BTU6
LPLLKIIKKKNSIPE

RGPD3

611

A6NKT7
KLKFKDQLVDLEVPP

CCDC181

151

Q5TID7
KLELLVQPKLLAKEL

FRMD4A

31

Q9P2Q2
LLKPIIKVLPKLFES

CKAP5

161

Q14008
AELRKLLPTLPPDKK

NHLH1

96

Q02575
LLPTLPPDKKLSKIE

NHLH1

101

Q02575
PPDKKLSKIEILRLA

NHLH1

106

Q02575
KAQILVAKPELKDPI

CBX2

146

Q14781
LQKKDLLEPESVIKP

DOCK10

371

Q96BY6
TLRLVELPKEAKPKL

C7orf61

56

Q8IZ16
CKPKLLPLKSLTLEK

BBIP1

51

A8MTZ0
LVAKAVPEKLQPLLD

C14orf119

61

Q9NWQ9
ALLPEDIPSNKIILK

FAT3

3036

Q8TDW7
LLLPKGVVLKLKPVA

GON4L

971

Q3T8J9
LEKIKLCLSKKPLPS

ASIC5

16

Q9NY37
KKIEALPPDKLLNLA

DENND2C

151

Q68D51
PIKDPVKLLKDTLDA

DNAJC13

1271

O75165
EIIPPFLKLSKEKVT

EFCAB13

101

Q8IY85
LVDLKLKKLLEVQPQ

EHBP1

946

Q8NDI1
LEKILGTKPEEPLVL

MAMLD1

196

Q13495
HLLPILPKDKKEVEI

MAN1A1

636

P33908
KVLLDPKVLRIFPDK

CEP192

1936

Q8TEP8
LLPSLKTKKPRELVL

FAM118B

31

Q9BPY3
KKLRSDEPLIDPKLL

FAM47A

706

Q5JRC9
DEPLIDPKLLLKKPD

FAM47A

711

Q5JRC9
DPKLLLKKPDEPDVL

FAM47A

716

Q5JRC9
LLPDPRELIEIKNKK

GBF1

686

Q92538
KLLGIETPLPKKELL

ICAM1

56

P05362
KPTESLVKKEKQLLP

CCDC168

4741

Q8NDH2
LLNKLTSKNEPLLKP

DIP2A

381

Q14689
EPLLKLENKKIENPV

ERCC6L2

1426

Q5T890
IKSKPKVLVVDLPIL

DNAH10

4396

Q8IVF4
LVKLPVIVKLEKPLP

RSF1

286

Q96T23
LILLLIPLKDKLVDP

SLC15A4

376

Q8N697
IEQIPLVKLPLKIDI

DTWD1

81

Q8N5C7
LVKLPLKIDIIKHPN

DTWD1

86

Q8N5C7
LDKKPLKPIRDVISL

CNTNAP3B

196

Q96NU0
IPTKLPLSKSEEKAL

CREB3L2

281

Q70SY1
KLELIPEAKIPAKIS

LRRC8D

496

Q7L1W4
VDIILLLSDKDPPKL

MTBP

166

Q96DY7
VLPLLKIIKKNSIPE

RGPD1

601

P0DJD0
LKALILKLKDPDPDP

MTOR

776

P42345
IKHLKLKSQPIEIPE

MAP3K5

1281

Q99683
LLPVLPEKLFEEKEK

TAF3

681

Q5VWG9
VKRLLIKKLPPVLAI

USP9X

1781

Q93008
LPLLKIIKKKNSIPE

RGPD4

611

Q7Z3J3
LAKQLAKPKEKIPII

SNX9

221

Q9Y5X1
IREKLKAKPLLLQLP

GFM2

211

Q969S9
EVLKQLPPKKDRIEL

SMARCAD1

726

Q9H4L7
KVVKHLIRIKPLKLP

MRPL30

111

Q8TCC3
LPKEVASAKPKVLLD

SAMHD1

476

Q9Y3Z3
LKPLLKQPSEVLFVK

FER1L5

86

A0AVI2
LQKSPLHIKDDVLPK

RIF1

1451

Q5UIP0
LLKLKVLEPYPSKLS

LARS1

266

Q9P2J5
VCVVLKKSPQLLKLP

MTERF4

141

Q7Z6M4
TLPPDKKLSKIEILR

NHLH2

106

Q02577
LRLQDKKLPPLLSEI

NR1H2

441

P55055
TLVRPKPLLLKLLKS

MDM2

26

Q00987
SLPKKLKPEQIRVEI

WIZ

1171

O95785
LSLLKEILKRPVDPI

SUPV3L1

491

Q8IYB8
EKQLPVLDKTKFLVP

MAP1LC3A

41

Q9H492
PEIEPKLLGKLKDII

SMARCC2

146

Q8TAQ2
ETPKVLPKSLLLKNS

SSH1

746

Q8WYL5
LTEKLKVLYKLHLPP

TBC1D9B

916

Q66K14
PDLLKVITKPFTKLI

SLC34A2

261

O95436
PPLKRLFLEKKLDTV

TRIML2

356

Q8N7C3
KPLKIELKVELPGIN

PIH1D2

246

Q8WWB5
EGLLLKIDPLLPKEV

MRPL1

301

Q9BYD6
KLVLNKIEKQIVLPP

UNC13C

1921

Q8NB66
EKQLPVLDKTKFLVP

MAP1LC3B2

41

A6NCE7
KKLPQVEHVLPLLKR

MTREX

436

P42285
KKVLAKTLISLPPQE

SNX1

106

Q13596
AAIAVLEELKKLPPL

STAU1

241

O95793
KKIPFKILLLIDNAP

TIGD1

291

Q96MW7
KSKLKAPIPIELVVV

SLC26A2

326

P50443
KEKPDIFQLVSVKLP

WDR75

121

Q8IWA0
PGPEQVKLKKEISLL

SLC7A7

26

Q9UM01
RKKPDLSPLKLTILA

TTC41P

526

Q6P2S7
KIENLPPLIFKDLKE

RXFP1

306

Q9HBX9
DKLLSPKNLLITPKD

STAB2

1721

Q8WWQ8
KIKLLDTPSKPVLPL

TESK1

391

Q15569
KTLQKLPHILKELPE

SLF1

1016

Q9BQI6
LPANPKKQLILKVIS

PLCH1

726

Q4KWH8
KEVIQALPKLIKLNP

SYMPK

901

Q92797
ALPKLIKLNPIVVKE

SYMPK

906

Q92797
LLASPIKLDDLKVPI

PRSS55

161

Q6UWB4
KIPKLFDEINPETKL

SERPINA10

216

Q9UK55
KITKKPIPDEHLILK

SEC31A

1106

O94979
LLDTPIKNLLDTPVK

TET2

1111

Q6N021
LRKIIPTLPSDKLSK

TWIST1

131

Q15672
VPIAKILLENVLKPL

UBE3C

231

Q15386
KEALKEAVILPIKFP

VPS4A

136

Q9UN37
KIIPTLPSDKLSKIQ

TWIST2

91

Q8WVJ9
LKGLIKIVKPAEIPE

SLC4A1AP

571

Q9BWU0
PPEVLDTLSQLLKVK

MYO9B

431

Q13459