Cluster composition

Functions

CategoryNameIntersectionWithQueryPValueGenesInTermGenesInQueryGenesInTermInQueryID
GeneOntologyMolecularFunctionkainate selective glutamate receptor activity

GRIK2 GRIK4

1.55e-046652GO:0015277
GeneOntologyCellularComponentkainate selective glutamate receptor complex

GRIK2 GRIK4

1.42e-046652GO:0032983
DomainANF_lig-bd_rcpt

GUCY2C GRIK2 GRIK4

3.01e-0437663IPR001828
DomainANF_receptor

GUCY2C GRIK2 GRIK4

3.01e-0437663PF01094
DomainPeripla_BP_I

GUCY2C GRIK2 GRIK4

3.52e-0439663IPR028082
DomainAAA

ORC1 PSMC4 FIGNL1

8.23e-0452663PF00004
DomainATPase_AAA_core

ORC1 PSMC4 FIGNL1

9.19e-0454663IPR003959
DomainDynein_HC_stalk

DNHD1 DNAH8

1.09e-0314662IPR024743
DomainDynein_heavy_dom-2

DNHD1 DNAH8

1.09e-0314662IPR013602
DomainDHC_N2

DNHD1 DNAH8

1.09e-0314662PF08393
DomainMT

DNHD1 DNAH8

1.09e-0314662PF12777
DomainDHC_fam

DNHD1 DNAH8

1.25e-0315662IPR026983
DomainDynein_heavy_dom

DNHD1 DNAH8

1.25e-0315662IPR004273
DomainDynein_heavy

DNHD1 DNAH8

1.25e-0315662PF03028
DomainAAA+_ATPase

ORC1 PSMC4 DNAH8 FIGNL1

1.69e-03144664IPR003593
DomainAAA

ORC1 PSMC4 DNAH8 FIGNL1

1.69e-03144664SM00382
DomainIontro_rcpt

GRIK2 GRIK4

1.81e-0318662IPR001320
DomainLig_chan-Glu_bd

GRIK2 GRIK4

1.81e-0318662PF10613
DomainIono_rcpt_met

GRIK2 GRIK4

1.81e-0318662IPR001508
DomainGlu/Gly-bd

GRIK2 GRIK4

1.81e-0318662IPR019594
DomainLig_chan-Glu_bd

GRIK2 GRIK4

1.81e-0318662SM00918
DomainLig_chan

GRIK2 GRIK4

1.81e-0318662PF00060
DomainPBPe

GRIK2 GRIK4

1.81e-0318662SM00079
Domain-

LRIG2 BOC CD19 MYCBP2 NXPE1 IL1R1 IL22RA1 LRIT3

2.26e-036636682.60.40.10
DomainIg-like_fold

LRIG2 BOC CD19 MYCBP2 NXPE1 IL1R1 IL22RA1 LRIT3

3.33e-03706668IPR013783
DomainCollagen

COL6A1 COL9A2 C1QC

3.39e-0385663IPR008160
DomainCollagen

COL6A1 COL9A2 C1QC

3.39e-0385663PF01391
DomainIg_I-set

LRIG2 BOC IL1R1 LRIT3

4.58e-03190664IPR013098
DomainI-set

LRIG2 BOC IL1R1 LRIT3

4.58e-03190664PF07679
Pubmed

HiPLA: High-throughput imaging proximity ligation assay.

NCOR2 MDC1 BRD7 ATM

1.82e-064666430419336
Pubmed

Interplay between the DNA damage proteins MDC1 and ATM in the regulation of the spindle assembly checkpoint.

MDC1 ATM

3.55e-06266224509855
Pubmed

Autophosphorylation at serine 1981 stabilizes ATM at DNA damage sites.

MDC1 ATM

3.55e-06266220026654
Pubmed

Characterization of the TGF-β1 signaling abnormalities in the Gata1low mouse model of myelofibrosis.

GATA1 LTBP1

3.55e-06266223462118
Pubmed

53BP1 and NFBD1/MDC1-Nbs1 function in parallel interacting pathways activating ataxia-telangiectasia mutated (ATM) in response to DNA damage.

MDC1 ATM

1.06e-05366214695167
Pubmed

Distinct Subunit Domains Govern Synaptic Stability and Specificity of the Kainate Receptor.

GRIK2 GRIK4

1.06e-05366227346345
Pubmed

Orchestration of the DNA-damage response by the RNF8 ubiquitin ligase.

MDC1 ATM

1.06e-05366218006705
Pubmed

MDC1 maintains genomic stability by participating in the amplification of ATM-dependent DNA damage signals.

MDC1 ATM

1.06e-05366216427009
Pubmed

Early B-cell-specific inactivation of ATM synergizes with ectopic CyclinD1 expression to promote pre-germinal center B-cell lymphomas in mice.

CD19 ATM

1.06e-05366225676421
Pubmed

Knockdown of RNF2 enhances the radiosensitivity of squamous cell carcinoma in lung.

MDC1 ATM

1.06e-05366230673298
Pubmed

Role of ATM and the damage response mediator proteins 53BP1 and MDC1 in the maintenance of G(2)/M checkpoint arrest.

MDC1 ATM

1.06e-05366220421415
Pubmed

A Murine Model of Chronic Lymphocytic Leukemia Based on B Cell-Restricted Expression of Sf3b1 Mutation and Atm Deletion.

CD19 ATM

1.06e-05366230712845
Pubmed

ASF1a Promotes Non-homologous End Joining Repair by Facilitating Phosphorylation of MDC1 by ATM at Double-Strand Breaks.

MDC1 ATM

2.12e-05466228943310
Pubmed

Loss of Roquin induces early death and immune deregulation but not autoimmunity.

CD19 IL22RA1

2.12e-05466221844204
Pubmed

Distribution of kainate receptor subunits at hippocampal mossy fiber synapses.

GRIK2 GRIK4

2.12e-05466212954862
Pubmed

Bcl6 Sets a Threshold for Antiviral Signaling by Restraining IRF7 Transcriptional Program.

NCOR2 IRF7

2.12e-05466226728228
Pubmed

Two mouse models reveal an actionable PARP1 dependence in aggressive chronic lymphocytic leukemia.

CD19 ATM

2.12e-05466228751718
Pubmed

DNA damage activates ATM through intermolecular autophosphorylation and dimer dissociation.

MDC1 ATM

2.12e-05466212556884
Pubmed

Developmental expression patterns of kainate receptors in the mouse spinal cord.

GRIK2 GRIK4

3.53e-05566223076118
Pubmed

NIMA-related protein kinase 1 is involved early in the ionizing radiation-induced DNA damage response.

MDC1 ATM

3.53e-05566215604234
Pubmed

Complete Disruption of the Kainate Receptor Gene Family Results in Corticostriatal Dysfunction in Mice.

GRIK2 GRIK4

3.53e-05566228228252
Pubmed

Transsynaptic Modulation of Kainate Receptor Functions by C1q-like Proteins.

GRIK2 GRIK4

3.53e-05566227133466
Pubmed

Development of laminar distributions of kainate receptors in the somatosensory cortex of mice.

GRIK2 GRIK4

3.53e-0556629593973
Pubmed

Determination of kainate receptor subunit ratios in mouse brain using novel chimeric protein standards.

GRIK2 GRIK4

3.53e-05566226448475
Pubmed

Biochemical and assembly properties of GluR6 and KA2, two members of the kainate receptor family, determined with subunit-specific antibodies.

GRIK2 GRIK4

3.53e-0556628288598
Pubmed

Kainate receptors: pharmacology, function and therapeutic potential.

GRIK2 GRIK4

3.53e-05566218793656
Pubmed

DNA double-strand break response factors influence end-joining features of IgH class switch and general translocation junctions.

CD19 ATM

3.53e-05566229311308
Pubmed

Kainate receptor subunits underlying presynaptic regulation of transmitter release in the dorsal horn.

GRIK2 GRIK4

3.53e-05566212223554
Pubmed

Molecular determinants of kainate receptor trafficking.

GRIK2 GRIK4

3.53e-05566218358623
Pubmed

Preferential assembly of heteromeric kainate and AMPA receptor amino terminal domains.

GRIK2 GRIK4

3.53e-05566229058671
Pubmed

H2AFX and MDC1 promote maintenance of genomic integrity in male germ cells.

MDC1 ATM

3.53e-05566229437857
Pubmed

Voltage-dependent conformational changes of Kv1.3 channels activate cell proliferation.

DNHD1 ORC1 PSMC4 C1QC RYR1

4.84e-0520866533230847
Pubmed

MDC1 is required for the intra-S-phase DNA damage checkpoint.

MDC1 ATM

5.29e-05666212607003
Pubmed

RAG Represents a Widespread Threat to the Lymphocyte Genome.

MDC1 ATM

5.29e-05666226234156
Pubmed

The proximity ligation assay reveals that at DNA double-strand breaks WRAP53β associates with γH2AX and controls interactions between RNF8 and MDC1.

MDC1 ATM

5.29e-05666226734725
Pubmed

Neto1 is an auxiliary subunit of native synaptic kainate receptors.

GRIK2 GRIK4

5.29e-05666221734292
Pubmed

BAL1 and its partner E3 ligase, BBAP, link Poly(ADP-ribose) activation, ubiquitylation, and double-strand DNA repair independent of ATM, MDC1, and RNF8.

MDC1 ATM

5.29e-05666223230272
Pubmed

Formation of dynamic gamma-H2AX domains along broken DNA strands is distinctly regulated by ATM and MDC1 and dependent upon H2AX densities in chromatin.

MDC1 ATM

5.29e-05666219450528
Pubmed

N-glycan content modulates kainate receptor functional properties.

GRIK2 GRIK4

5.29e-05666228714086
Pubmed

Immune homeostasis and regulation of the interferon pathway require myeloid-derived Regnase-3.

CD19 ZC3H12C

5.29e-05666231126966
Pubmed

Orientation-specific joining of AID-initiated DNA breaks promotes antibody class switching.

CD19 ATM

7.40e-05766226308889
Pubmed

Short-term plasticity of kainate receptor-mediated EPSCs induced by NMDA receptors at hippocampal mossy fiber synapses.

GRIK2 GRIK4

7.40e-05766217428973
Pubmed

Monoubiquitination of H2AX protein regulates DNA damage response signaling.

MDC1 ATM

7.40e-05766221676867
Pubmed

Glutamate binding and conformational flexibility of ligand-binding domains are critical early determinants of efficient kainate receptor biogenesis.

GRIK2 GRIK4

7.40e-05766219342380
Pubmed

BRIT1 regulates early DNA damage response, chromosomal integrity, and cancer.

MDC1 ATM

7.40e-05766216872911
Pubmed

NFBD1/MDC1 regulates ionizing radiation-induced focus formation by DNA checkpoint signaling and repair factors.

MDC1 ATM

7.40e-05766214519663
Pubmed

Sequence variant discovery in DNA repair genes from radiosensitive and radiotolerant prostate brachytherapy patients.

MDC1 ATM

9.86e-05866219638463
Pubmed

WSTF acetylation by MOF promotes WSTF activities and oncogenic functions.

MDC1 ATM

9.86e-05866232518374
Pubmed

FIGNL1-containing protein complex is required for efficient homologous recombination repair.

MDC1 FIGNL1

9.86e-05866223754376
Pubmed

A novel POK family transcription factor, ZBTB5, represses transcription of p21CIP1 gene.

NCOR2 ZBTB5

9.86e-05866219491398
Pubmed

In Vivo Visualizing the IFN-β Response Required for Tumor Growth Control in a Therapeutic Model of Polyadenylic-Polyuridylic Acid Administration.

CD19 IRF7

1.27e-04966226880763
Pubmed

The histone demethylase LSD1/KDM1A promotes the DNA damage response.

MDC1 ATM

1.27e-04966224217620
Pubmed

IL-33 induces IL-13-dependent cutaneous fibrosis.

GATA1 IL1R1

1.27e-04966220042577
Pubmed

Splicing and editing of ionotropic glutamate receptors: a comprehensive analysis based on human RNA-Seq data.

GRIK2 GRIK4

1.27e-04966234100982
Pubmed

Expression of glutamate receptor subunit genes during development of the mouse retina.

GRIK2 GRIK4

1.27e-0496629051806
Pubmed

Characterization of the Extracellular Matrix of Normal and Diseased Tissues Using Proteomics.

COL6A1 THBS2 C1QC LTBP1

1.30e-0413566428675934
Pubmed

A Damage-Independent Role for 53BP1 that Impacts Break Order and Igh Architecture during Class Switch Recombination.

CD19 ATM

1.58e-041066227320916
Pubmed

Disorganized epithelial polarity and excess trophectoderm cell fate in preimplantation embryos lacking E-cadherin.

PRKCZ CDH3

1.58e-041066220826529
Pubmed

PARP1-dependent recruitment of KDM4D histone demethylase to DNA damage sites promotes double-strand break repair.

MDC1 ATM

1.58e-041066224550317
Pubmed

The hSSB1 orthologue Obfc2b is essential for skeletogenesis but dispensable for the DNA damage response in vivo.

CD19 ATM

1.58e-041066222940690
Pubmed

Roles of cell-adhesion molecules nectin 1 and nectin 3 in ciliary body development.

COL9A2 CDH3

1.58e-041066215728677
Pubmed

Characterization of binding properties of the myelin-associated glycoprotein to extracellular matrix constituents.

COL6A1 COL9A2

1.58e-04106622446864
Pubmed

Proteome-scale mapping of binding sites in the unstructured regions of the human proteome.

NCOR2 GSPT2 MDC1 ATM BCL9 NYAP1

1.68e-0443066635044719
Pubmed

MDC1 is a mediator of the mammalian DNA damage checkpoint.

MDC1 ATM

1.93e-041166212607005
Pubmed

53BP1-dependent robust localized KAP-1 phosphorylation is essential for heterochromatic DNA double-strand break repair.

MDC1 ATM

1.93e-041166220081839
Pubmed

Mutations in C1orf194, encoding a calcium regulator, cause dominant Charcot-Marie-Tooth disease.

COL6A1 RYR1

1.93e-041166231199454
Pubmed

Initiation of Antiviral B Cell Immunity Relies on Innate Signals from Spatially Positioned NKT Cells.

CD19 IL1R1

1.93e-041166229249358
Pubmed

Extracellular matrix signatures of human primary metastatic colon cancers and their metastases to liver.

COL6A1 COL9A2 C1QC LTBP1

2.10e-0415366425037231
Pubmed

HIV-1 Tat and AIDS-associated cancer: targeting the cellular anti-cancer barrier?

PRKCZ ATM

2.31e-041266218577246
Pubmed

Network-Based Combinatorial CRISPR-Cas9 Screens Identify Synergistic Modules in Human Cells.

ATM IL1R1 IL22RA1

2.39e-046366330762338
Pubmed

RNA is an Adjuvanticity Mediator for the Lipid-Based Mucosal Adjuvant, Endocine.

IRF7 IL1R1

2.73e-041366227374884
Pubmed

Glutamatergic gene variants impact the clinical profile of efficacy and side effects of haloperidol.

GRIK2 GRIK4

2.73e-041366220859245
Pubmed

DNA methylation profiling in doxorubicin treated primary locally advanced breast tumours identifies novel genes associated with survival and treatment response.

ATM CDH3

3.18e-041466220338046
Pubmed

Deletion of maternal UHRF1 severely reduces mouse oocyte quality and causes developmental defects in preimplantation embryos.

ATM FIGNL1

3.18e-041466230995416
Pubmed

Sequential Activation of Two Pathogen-Sensing Pathways Required for Type I Interferon Expression and Resistance to an Acute DNA Virus Infection.

IRF7 IL1R1

3.18e-041466226682986
Pubmed

USP44 Is an Integral Component of N-CoR that Contributes to Gene Repression by Deubiquitinating Histone H2B.

NCOR2 PSMC4

3.18e-041466227880911
Pubmed

Phosphoproteome analysis of mouse liver using immobilized metal affinity purification and linear ion trap mass spectrometry.

SELENBP1 CD19

3.18e-041466215378723
Pubmed

ESCPE-1 mediates retrograde endosomal sorting of the SARS-CoV-2 host factor Neuropilin-1.

LRIG2 COL6A1 MYCBP2 LRP11 ERP29 GRIK2 DOLPP1 LTBP1 ATM

4.28e-04120166935696571
Pubmed

Inhaled Fine Particles Induce Alveolar Macrophage Death and Interleukin-1α Release to Promote Inducible Bronchus-Associated Lymphoid Tissue Formation.

IRF7 IL1R1

4.74e-041766228002730
Pubmed

Pharmacogenomic study of side-effects for antidepressant treatment options in STAR*D.

NTMT1 ZDHHC14

4.74e-041766222041458
Pubmed

Interaction network of human early embryonic transcription factors.

NCOR2 ZFHX4 MDC1 BRD7 BCL9

5.49e-0435166538297188
Pubmed

ILK modulates epithelial polarity and matrix formation in hair follicles.

PRKCZ CDH3

5.94e-041966224371086
Pubmed

A novel miR1983-TLR7-IFNβ circuit licenses NK cells to kill glioma cells, and is under the control of galectin-1.

IRF7 IL1R1

5.94e-041966234249474
Pubmed

Comprehensive proteomic characterization of stem cell-derived extracellular matrices.

COL6A1 THBS2 LTBP1

5.97e-048666328327460
Pubmed

SR protein kinases promote splicing of nonconsensus introns.

ZFHX4 CLCNKA MYCBP2 MDC1 MFSD10

6.23e-0436166526167880
Pubmed

The European renal genome project: an integrated approach towards understanding the genetics of kidney development and disease.

COL6A1 GRIK4 CDH3 NPAS1

7.20e-0421266419521566
Pubmed

USP15 Deubiquitinates TUT1 Associated with RNA Metabolism and Maintains Cerebellar Homeostasis.

MYCBP2 PSMC4

7.28e-042166232839293
Pubmed

E-cadherin is essential for in vivo epidermal barrier function by regulating tight junctions.

PRKCZ CDH3

7.28e-042166215775979
Pubmed

Direct interaction between hnRNP-M and CDC5L/PLRG1 proteins affects alternative splice site choice.

NCOR2 MYO15B RTCB BRD7 PSMC4 ATM

8.31e-0458266620467437
Pubmed

The human EKC/KEOPS complex is recruited to Cullin2 ubiquitin ligases by the human tumour antigen PRAME.

PSMC4 OSGEP

8.75e-042366222912744
Pubmed

Tead4 is required for specification of trophectoderm in pre-implantation mouse embryos.

PRKCZ CDH3

8.75e-042366218083014
Pubmed

IRF8 Regulates Transcription of Naips for NLRC4 Inflammasome Activation.

IRF7 IL1R1

8.75e-042366229576451
Pubmed

SOX9-COL9A3-dependent regulation of choroid plexus epithelial polarity governs blood-cerebrospinal fluid barrier integrity.

COL9A2 PRKCZ

8.75e-042366233526661
Pubmed

Glutamate can act as a signaling molecule in mouse preimplantation embryos†.

GRIK2 GRIK4

9.53e-042466235746896
Pubmed

Associations of 25 structural, degradative, and inflammatory candidate genes with lumbar disc desiccation, bulging, and height narrowing.

COL9A2 IL1R1

1.03e-032566219180518
Pubmed

ATM and ATR substrate analysis reveals extensive protein networks responsive to DNA damage.

DNHD1 MDC1

1.21e-032766217525332
Pubmed

Mapping Extracellular Protein-Protein Interactions Using Extracellular Proximity Labeling (ePL).

COL6A1 THBS2 PSMC4 LTBP1

1.27e-0324766439238192
Pubmed

Extracellular matrix secretion by cardiac fibroblasts: role of microRNA-29b and microRNA-30c.

COL6A1 THBS2 C1QC LTBP1

1.29e-0324866424006456
Pubmed

USP14 is a deubiquitinase for Ku70 and critical determinant of non-homologous end joining repair in autophagy and PTEN-deficient cells.

MDC1 PSMC4

1.49e-033066231740976
Pubmed

Mammalian SWI/SNF collaborates with a polycomb-associated protein to regulate male germline transcription in the mouse.

MDC1 BRD7

1.49e-033066231043422
Cytoband1p36.11

GPN2 C1QC IL22RA1

1.33e-04686631p36.11
CytobandEnsembl 112 genes in cytogenetic band chr1p36

VPS13D CLCNKA GPN2 C1QC PRKCZ IL22RA1

4.45e-04681666chr1p36
CytobandEnsembl 112 genes in cytogenetic band chr11q22

MMP27 ZC3H12C ATM

5.06e-04107663chr11q22
Cytoband1p13.1

LRIG2 KCNA10

1.04e-03336621p13.1
Cytoband11q22.3

GRIK4 ZC3H12C

1.85e-034466211q22.3
GeneFamilyGlutamate ionotropic receptor kainate type subunits

GRIK2 GRIK4

5.24e-0554221199
GeneFamilyAAA ATPases

ORC1 PSMC4 FIGNL1

2.52e-0453423413
GeneFamilyBlood group antigens|CD molecules|I-set domain containing|Immunoglobulin like domain containing

LRIG2 BOC IL1R1 LRIT3

5.21e-04161424593
GeneFamilyCD molecules|I-set domain containing|Immunoglobulin like domain containing|Interleukin receptors|TIR domain containing

IL1R1 IL22RA1

4.28e-0342422602
GeneFamilyCollagens

COL6A1 COL9A2

5.11e-0346422490
GeneFamilyImmunoglobulin like domain containing

BOC CD19 IL1R1

1.01e-02193423594
CoexpressionGSE22886_NAIVE_CD4_TCELL_VS_12H_ACT_TH2_UP

LRIG2 VPS13D MYO15B MYCBP2 ERP29 PRKCZ ITPKB

6.98e-07199667M4526
CoexpressionGSE33424_CD161_HIGH_VS_NEG_CD8_TCELL_UP

ESRP2 CD19 MYCBP2 ZDHHC14 ZC3H12C FIGNL1

1.14e-05200666M8541
CoexpressionAtlasFacebaseRNAseq_e8.5_Paraxial Mesoderm_top-relative-expression-ranked_2500_k-means-cluster#4

BOC COL6A1 COL9A2 THBS2 VPS13D SELENBP1 ZFHX4 GRIK4 C1orf216 BCL9 IL1R1 ITPKB

1.91e-067316512Facebase_RNAseq_e8.5_Paraxial Mesoderm_2500_K4
CoexpressionAtlasFacebaseRNAseq_ratio_e9.5_MandibularArch_vs_MaxillaryArch_top-relative-expression-ranked_2500_k-means-cluster#5

BOC COL6A1 COL9A2 VPS13D SELENBP1 ZFHX4 GRIK4 C1orf216 BCL9 IL1R1 ITPKB

1.28e-057346511Facebase_RNAseq_ratio_e9.5_MandibularArch_vs_MaxillaryArch_2500_K5
CoexpressionAtlasFacebaseRNAseq_e9.5_Facial Mesenchyne_top-relative-expression-ranked_2500_k-means-cluster#2

BOC COL6A1 COL9A2 ZFHX4 GRIK4 C1orf216 OSGEP BCL9 IL1R1 ITPKB

2.38e-056426510Facebase_RNAseq_e9.5_Facial Mesenchyne_2500_K2
CoexpressionAtlasFacebaseRNAseq_ratio_e9.5_MandibularArch_vs_MaxillaryArch_top-relative-expression-ranked_1000_k-means-cluster#2

COL9A2 THBS2 SELENBP1 ZFHX4 GRIK4 C1orf216 IL1R1

2.92e-05290657Facebase_RNAseq_ratio_e9.5_MandibularArch_vs_MaxillaryArch_1000_K2
CoexpressionAtlasFacebaseRNAseq_ratio_e9.5_MandibularArch_vs_MaxillaryArch_top-relative-expression-ranked_1000

ESRP2 COL6A1 COL9A2 THBS2 SELENBP1 ZFHX4 C1QC LTBP1 GRIK4 C1orf216 IL1R1 CDH3

3.21e-059676512Facebase_RNAseq_ratio_e9.5_MandibularArch_vs_MaxillaryArch_1000
CoexpressionAtlasFacebaseRNAseq_e8.5_Non-Floor Plate Neural Epithelium_top-relative-expression-ranked_1000

ESRP2 ORC1 COL6A1 THBS2 GSPT2 ZFHX4 LRP11 PAK3 C1QC GRIK2 IL1R1 CDH3

3.52e-059766512Facebase_RNAseq_e8.5_Non-Floor Plate Neural Epithelium_1000
CoexpressionAtlasFacebaseRNAseq_e10.5_Mandibular Arch_top-relative-expression-ranked_2500_k-means-cluster#3

BOC COL6A1 COL9A2 THBS2 ZFHX4 GRIK4 C1orf216 OSGEP BCL9 IL1R1 ITPKB

4.13e-058346511Facebase_RNAseq_e10.5_Mandibular Arch_2500_K3
CoexpressionAtlasFacebaseRNAseq_e8.5_Non-Floor Plate Neural Epithelium_top-relative-expression-ranked_2500_k-means-cluster#1

BOC COL6A1 COL9A2 THBS2 ZFHX4 C1QC GRIK4 C1orf216 BCL9 IL1R1 ITPKB

6.57e-058786511Facebase_RNAseq_e8.5_Non-Floor Plate Neural Epithelium_2500_K1
CoexpressionAtlasFacebaseRNAseq_e8.5_Paraxial Mesoderm_top-relative-expression-ranked_1000_k-means-cluster#2

COL6A1 COL9A2 THBS2 ZFHX4 GRIK4 C1orf216 IL1R1

6.60e-05330657Facebase_RNAseq_e8.5_Paraxial Mesoderm_1000_K2
CoexpressionAtlasFacebaseRNAseq_ratio_e10.5_MaxillaryArch_vs_Mandibular_top-relative-expression-ranked_2500_k-means-cluster#5

BOC COL6A1 COL9A2 THBS2 SELENBP1 ZFHX4 GRIK4 OSGEP BCL9 IL1R1

6.71e-057266510Facebase_RNAseq_ratio_e10.5_MaxillaryArch_vs_Mandibular_2500_K5
CoexpressionAtlasFacebaseRNAseq_ratio_e10.5_MandibularArch_vs_MaxillaryArch_top-relative-expression-ranked_2500_k-means-cluster#4

BOC COL6A1 COL9A2 THBS2 ZFHX4 GRIK4 C1orf216 BCL9 IL1R1

7.52e-05591659Facebase_RNAseq_ratio_e10.5_MandibularArch_vs_MaxillaryArch_2500_K4
CoexpressionAtlasFacebaseRNAseq_e10.5_Medial Nasal Eminence_top-relative-expression-ranked_2500_k-means-cluster#4

BOC COL6A1 COL9A2 THBS2 ZFHX4 MDC1 GRIK4 C1orf216 BCL9 IL1R1

8.22e-057446510Facebase_RNAseq_e10.5_Medial Nasal Eminence_2500_K4
CoexpressionAtlasdev gonad_e12.5_F_VasAssMesen_MafB_top-relative-expression-ranked_1000

LRIG2 BOC ORC1 COL6A1 THBS2 SELENBP1 ZFHX4 LTBP1 IL1R1 CDH3

1.25e-047836510gudmap_dev gonad_e12.5_F_VasAssMesen_MafB_1000
CoexpressionAtlasFacebaseRNAseq_e8.5_Paraxial Mesoderm_top-relative-expression-ranked_1000

ESRP2 COL6A1 COL9A2 THBS2 ZFHX4 C1QC LTBP1 GRIK4 C1orf216 IL1R1 CDH3

1.55e-049676511Facebase_RNAseq_e8.5_Paraxial Mesoderm_1000
CoexpressionAtlasFacebaseRNAseq_e9.5_Olfactory Placode_top-relative-expression-ranked_2500_k-means-cluster#2

BOC COL6A1 COL9A2 ZFHX4 GRIK4 C1orf216 BCL9 IL1R1 ITPKB

1.64e-04655659Facebase_RNAseq_e9.5_Olfactory Placode_2500_K2
CoexpressionAtlasFacebaseRNAseq_e8.5_Floor Plate_top-relative-expression-ranked_2500_k-means-cluster#2

NCOR2 GSPT2 LRP11 PAK3 GRIK2 DOLPP1 ATM

2.01e-04395657Facebase_RNAseq_e8.5_Floor Plate_2500_K2
CoexpressionAtlasFacebaseRNAseq_e10.5_Olfactory Pit_top-relative-expression-ranked_2500_k-means-cluster#3

BOC COL6A1 ZFHX4 GRIK4 C1orf216 OSGEP IL1R1 ITPKB

3.26e-04567658Facebase_RNAseq_e10.5_Olfactory Pit_2500_K3
ToppCell(5)_Fibroblast-J_(Lipofibroblast)|World / Lung cell shreds - cell class (v4) and cell subclass (v4)

BOC COL6A1 THBS2 ZFHX4 GUCY2C IL1R1

4.63e-07196666afa29399decd17fda7d63add5039ff778627ccc2
ToppCellParenchymal-NucSeq-Stromal-Fibroblastic-Fibro_peribronchial|NucSeq / Cell types per location group and 10X technology with lineage, and cell group designations

BOC COL6A1 THBS2 PAK3 LTBP1 GRIK4

4.77e-0719766644673c38384453207871d3fd8e8ba9093cc06bc5
ToppCellFibroblasts|World / Immune cells in Rheumatoid Arthritis Joint Synovial Tissues

COL6A1 THBS2 SELENBP1 ZFHX4 LTBP1 IL1R1

5.06e-0719966640de6d4a31cf22efa2864f79e4ec8e2b7bfc9d4a
ToppCell10x_5'_v1-Neoplastic-Differentiated-like-MES-like-MES-like_hypoxia/MHC-Z|10x_5'_v1 / Platform, Oncotype, Lineage, Cell_class, celltype (level4), mutation group

COL6A1 THBS2 LRP11 IRF7 LTBP1

5.39e-06170665dfef8f79960979335b86b4730f224239b40735d5
ToppCell10x_5'_v1-Neoplastic-Differentiated-like-MES-like-MES-like_hypoxia/MHC|10x_5'_v1 / Platform, Oncotype, Lineage, Cell_class, celltype (level4), mutation group

COL6A1 THBS2 LRP11 IRF7 LTBP1

5.39e-06170665fb6098137d010175978596bc382e9ecba9c3891e
ToppCelldroplet-Marrow-nan-24m-Hematologic-nan|Marrow / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation

ORC1 CD19 GATA1 FIGNL1 SEC14L2

5.86e-0617366535dc897e06f905419d44093a92170d2cec35dd51
ToppCelldroplet-Marrow-nan-24m-Hematologic|Marrow / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation

ORC1 CD19 GATA1 FIGNL1 SEC14L2

5.86e-0617366537825d0dda028cf677ff6ff16ea58bff75cb25a7
ToppCellfacs-SCAT|facs / Fat_BAT_GAT_MAT_SCAT - method, tissue, subtissue, age, lineage, cell ontology and free annotation

THBS2 ZFHX4 MMP27 IRF7 IL1R1

7.11e-061806656c70b6b7480507fa94625013222ad338ee7dd1d9
ToppCellcellseq-Epithelial-Epithelial_Glandular-MEC-MEC|cellseq / Celltype signatures by Technology, Lineage, Lineage_subclass, Celltype_group, Cell_type2

BOC COL6A1 COL9A2 PAK3 CDH3

8.12e-0618566576304829fcfb5934188933ca20d33bc8c8b0dc91
ToppCellAdult-Mesenchymal-matrix_fibroblast_2_cell-D231|Adult / Lineage, Cell type, age group and donor

BOC COL6A1 THBS2 PAK3 LTBP1

8.12e-06185665fb6bd7e849ecf4ed9cd9c4e2a946a2d12d62f804
ToppCellcellseq-Epithelial-Epithelial_Glandular-MEC|cellseq / Celltype signatures by Technology, Lineage, Lineage_subclass, Celltype_group, Cell_type2

BOC COL6A1 COL9A2 PAK3 CDH3

8.12e-061856650595e7ab37eed690f6e3d16a9a4e9a4bce2b89db
ToppCellPCW_07-8.5-Mesenchymal-Mesenchymal_fibroblastic-mes_Arw_fibro_(16)|PCW_07-8.5 / Celltypes from embryonic and fetal-stage human lung

BOC COL9A2 THBS2 PAK3 LTBP1

8.34e-061866654d68ee3d32f7ef884faf402ef92b31b0eb4656f1
ToppCelldroplet-Spleen-SPLEEN-30m-Hematologic|Spleen / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation

ORC1 SELENBP1 GATA1 FIGNL1 SEC14L2

8.34e-06186665ac6e32cf07f0f013101ca7aedae0c562857f182b
ToppCelldroplet-Spleen-SPLEEN-30m-Hematologic-nan|Spleen / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation

ORC1 SELENBP1 GATA1 FIGNL1 SEC14L2

8.34e-061866657cdcf507a9a1349ed2cf62b79116367c3fc732dd
ToppCelldroplet-Spleen-SPLEEN-30m-Hematologic-megakaryocyte-erythroid_progenitor_cell|Spleen / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation

ORC1 SELENBP1 GATA1 FIGNL1 SEC14L2

8.55e-06187665dceca7ae3dae96078cccc17a0d8a61b06fa6dffb
ToppCellPCW_05-06-Mesenchymal-Mesenchymal_myocytic-mes_ASM_(13)|PCW_05-06 / Celltypes from embryonic and fetal-stage human lung

THBS2 PAK3 PNCK GRIK2 LTBP1

8.78e-0618866574f7d216209cabdc96b2d46685b0ae017fdcc8fc
ToppCellControl-Fibroblasts-Adventitial_FB|Control / group, cell type (main and fine annotations)

BOC COL6A1 THBS2 PAK3 LTBP1

8.78e-06188665706a26c372add839d947749f0521a0e1f5c9b0ec
ToppCellMid-temporal_gyrus_(MTG)-Non-neuronal-Macroglial|Mid-temporal_gyrus_(MTG) / Sample groups (6 Anatomical region groups), with 5 level hierarchy of cell types

COL9A2 MYO15B SELENBP1 ZFHX4 ITPKB

8.78e-06188665505b6b4277d7dea87aee27191d0acca67928b8e6
ToppCellprimary_auditory_cortex_(A1C)-Non-neuronal|primary_auditory_cortex_(A1C) / Sample groups (6 Anatomical region groups), with 5 level hierarchy of cell types

COL9A2 MYO15B SELENBP1 ZFHX4 ITPKB

9.01e-0618966537ecbd73408d462b47d7e5611f203143e08a2689
ToppCellCF-Lymphoid-B_cell|CF / Disease state, Lineage and Cell class

CD19 MYCBP2 ZDHHC14 ATM DNAH8

9.24e-06190665374d8fd63c733178acab07682ed1519693efab45
ToppCellAnterior_Cingulate_gyrus_(CgG)-Non-neuronal-Macroglial|Anterior_Cingulate_gyrus_(CgG) / Sample groups (6 Anatomical region groups), with 5 level hierarchy of cell types

COL9A2 MYO15B SELENBP1 ZFHX4 ITPKB

9.24e-061906652de8e4cfeee350a9a76af749d6ce58d948c129b8
ToppCellsaliva-Severe-critical_progression_d12-22_with-steroid-Lymphocytic|Severe-critical_progression_d12-22_with-steroid / Compartment, severity and other cell annotations on 10x 3' data (130k)

DNAAF2 MYCBP2 ZDHHC14 PAK3 ERP29

9.24e-06190665373629dde5eda722424c5e6087763f0c5db67cf4
ToppCellASK440-Mesenchymal|ASK440 / Donor, Lineage and Cell class of Lung cells from Dropseq

BOC COL6A1 THBS2 ZFHX4 LTBP1

9.48e-06191665f12959eebb4167e1aa03de05d7711a702c58b3c9
ToppCellASK440-Mesenchymal-Fibroblast|ASK440 / Donor, Lineage and Cell class of Lung cells from Dropseq

BOC COL6A1 THBS2 ZFHX4 LTBP1

9.48e-06191665387296b5377ef6839f0812e5b3529a10b5f7d530
ToppCellAnterior_Cingulate_gyrus_(CgG)-Non-neuronal|Anterior_Cingulate_gyrus_(CgG) / Sample groups (6 Anatomical region groups), with 5 level hierarchy of cell types

COL9A2 MYO15B SELENBP1 ZFHX4 ITPKB

9.48e-06191665f3158cedf67e3b90aa94ea1f61c72c33aaa2d5ba
ToppCellMid-temporal_gyrus_(MTG)-Non-neuronal|Mid-temporal_gyrus_(MTG) / Sample groups (6 Anatomical region groups), with 5 level hierarchy of cell types

COL9A2 MYO15B SELENBP1 ZFHX4 ITPKB

9.48e-06191665a90c8ab2077e52bbc998457c85a1b9867f9c8c93
ToppCellChildren_(3_yrs)-Mesenchymal-matrix_fibroblast_2_cell-D046|Children_(3_yrs) / Lineage, Cell type, age group and donor

BOC COL6A1 THBS2 PAK3 LTBP1

9.72e-06192665e0f4e4470a71bfa81d9dcd8594e5f82aafc24f81
ToppCellMesenchymal-matrix_fibroblast_2_cell|World / Lineage, Cell type, age group and donor

BOC COL6A1 THBS2 PAK3 LTBP1

9.72e-06192665a769158c49d2b208c4224d85e7ae68c85cc372ed
ToppCellCOVID-19-Fibroblasts-Other_FB|COVID-19 / group, cell type (main and fine annotations)

BOC COL6A1 THBS2 LTBP1 IL1R1

9.97e-06193665e6b75be08e33c1de079fb5c02f0b4468128b369c
ToppCellChildren_(3_yrs)-Mesenchymal-matrix_fibroblast_2_cell|Children_(3_yrs) / Lineage, Cell type, age group and donor

BOC COL6A1 THBS2 PAK3 LTBP1

9.97e-061936659ab47b360bee1d4f1092c2269e58acebe9584021
ToppCellrenal_cortex_nuclei-Hypertensive_with+without-CKD-Mesenchymal-Fibroblast-kidney_interstitial_fibroblast-Adaptive_/_Maladaptive_/_Repairing_Fibroblast|Hypertensive_with+without-CKD / Celltypes from Cells and Nuclei per compartment and clinical group

BOC THBS2 ZFHX4 PAK3 LTBP1

1.02e-05194665c49f72441b3557e2c3a9c4239e68c0cf0652814b
ToppCellrenal_cortex_nuclei-Hypertensive_with+without-CKD-Mesenchymal-Fibroblast-kidney_interstitial_fibroblast|Hypertensive_with+without-CKD / Celltypes from Cells and Nuclei per compartment and clinical group

BOC THBS2 ZFHX4 PAK3 LTBP1

1.05e-051956653c3703f092b6fc1b7333426fb5e2823bfb74bb57
ToppCellAdult-Mesenchymal|Adult / Lineage, Cell type, age group and donor

BOC COL6A1 THBS2 LTBP1 GRIK4

1.13e-0519866526e55b409db2a1637c95fae7c54b0abea1ef550c
ToppCellFibroblasts-HLA-DRA_high_Fibroblasts|World / Immune cells in Rheumatoid Arthritis Joint Synovial Tissues

COL6A1 THBS2 SELENBP1 LTBP1 IL1R1

1.13e-05198665e8c0fbf306fae13e97caa294d7c99a564bd97130
ToppCellMesenchymal|World / Lineage, Cell type, age group and donor

BOC COL6A1 THBS2 LTBP1 IL1R1

1.16e-051996654bac110c2b3609f6ee5d0e3275da0824a6240270
ToppCelldistal-3-mesenchymal-Adventitial_Fibroblast|3 / Location, Lineage, Cell class (ontology) and Donor from 10X sequencing (macrophage renamed)

BOC COL6A1 THBS2 MMP27 LTBP1

1.16e-05199665547a7c30abc730af2670aee00c7a6af60426c9ac
ToppCellFibroblasts-CD34+_Fibroblasts|World / Immune cells in Rheumatoid Arthritis Joint Synovial Tissues

BOC COL6A1 THBS2 ZFHX4 LTBP1

1.16e-0519966513ff7409e200a0b46cdb7924d15ef33639693622
ToppCellLung_Parenchyma-Severe-Mesenchymal-Mesenchymal-Fibroblasts-2,_SCARA5-|Severe / Location, Disease Group, Cell group, Cell class and sub_cluster (2021.03.01)

BOC COL6A1 THBS2 LTBP1 IL1R1

1.18e-052006650b2614b8513693dd508c9003699049efd9abac52
ToppCellMacroglial|World / cells hierarchy compared to all cells using T-Statistic

COL9A2 MYO15B SELENBP1 ZFHX4 ITPKB

1.18e-05200665e6935ad49216d2500c15c05cbc2b89402c65e838
ToppCellBiopsy_Other_PF-Mesenchymal-PLIN2+_Fibroblasts|Biopsy_Other_PF / Sample group, Lineage and Cell type

BOC COL6A1 THBS2 LTBP1 IL1R1

1.18e-052006650aa316b71f195ecf17ee897e307f8928a755a637
ToppCellLung_Parenchyma-Severe-Mesenchymal-Mesenchymal-Fibroblasts-2,_SCARA5|Severe / Location, Disease Group, Cell group, Cell class (2021.03.09)

BOC COL6A1 THBS2 LTBP1 IL1R1

1.18e-052006658d2ceb2080c67b20f452eeca605aa27a58033c04
ToppCellParenchymal-NucSeq-Stromal-Fibroblastic-Fibro_adventitial|NucSeq / Cell types per location group and 10X technology with lineage, and cell group designations

BOC COL6A1 THBS2 PAK3 LTBP1

1.18e-0520066574e74123ea7bf38d337a3a0248a6a51437c6ab42
ToppCellParenchyma_COVID-19-Stromal-TX-Fibroblasts-2,_SCARA5|Parenchyma_COVID-19 / Sample group, Lineage and Cell type

BOC COL6A1 THBS2 LTBP1 IL1R1

1.18e-05200665c338a08c1605527ab9aaf62ea151a19e8469dc6d
ToppCell3'-Parenchyma_lung-Mesenchymal-Fibroblastic-fibroblastic_type_1-Subpleural_fibroblasts|3' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5

BOC COL6A1 THBS2 ZFHX4 IL1R1

1.18e-05200665d64895354218ebd0217011bae0967a6883bbd1cd
ToppCell356C-Lymphocytic-NK_cells-NK_cell_B0|NK_cells / Donor, Lineage, Cell class and subclass (all cells)

SELENBP1 GATA1 NYAP1 SEC14L2

5.27e-051386642709fb83dfe6c2e27050b08b678a6d6b25d47906
ToppCellrenal_medulla_nuclei-CKD+DKD_normotensive-Mesenchymal-Myocytic_interstitial_cell-Myofibroblast|CKD+DKD_normotensive / Celltypes from Cells and Nuclei per compartment and clinical group

THBS2 GSPT2 PAK3 LTBP1

8.48e-05156664d5207dbfbcfb885557ea1378dfe6a56d7102e94a
ToppCellrenal_medulla_nuclei-CKD+DKD_normotensive-Mesenchymal-Myocytic_interstitial_cell-Myofibroblast-|CKD+DKD_normotensive / Celltypes from Cells and Nuclei per compartment and clinical group

THBS2 GSPT2 PAK3 LTBP1

8.48e-05156664363f1b661048d25895e2b8681c82894c957b29c0
ToppCellmild_COVID-19_(asymptomatic)-B_intermediate|mild_COVID-19_(asymptomatic) / disease group, cell group and cell class (v2)

BOC CD19 GUCY2C DNAH8

1.08e-041666648de8f388f24436b84e19ef460476fdbda4d16abf
ToppCellChildren_(3_yrs)-Mesenchymal-myofibroblast_cell-D139|Children_(3_yrs) / Lineage, Cell type, age group and donor

BOC THBS2 LTBP1 IL1R1

1.08e-0416666494636dbc039f794c735960c3425e00bdd5523602
ToppCell3'_v3-blood-Lymphocytic_B-ABC_aged-B_memory|blood / Manually curated celltypes from each tissue

BOC CD19 GUCY2C DNAH8

1.13e-041686642ce1a30feb2704a9516d1dab161a26cb0555abb5
ToppCellPND10-Immune-Immune_Lymphocytic_T/NK-Lymphocytic_ILC-NK-ILC-ILC_prolif|PND10 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif

ORC1 SEPHS2 DCTD FIGNL1

1.15e-0416966420fbf78382fb0ba9a63ab1aa0abc615476994ac5
ToppCell10x5'-Liver-Lymphocytic_B-ABC_aged-B_memory|Liver / Manually curated celltypes from each tissue

BOC CD19 DNAH8 LRIT3

1.21e-04171664eb47f4a09a630ed14a0898377039ed50ef7cc292
ToppCell3'-Broncho-tracheal-Mesenchymal-Fibroblastic-fibroblastic_type_1-Adventitial_fibroblasts-|3' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5

BOC COL6A1 THBS2 LTBP1

1.24e-04172664e37c0b5b547a7345179ab258dd2141fec7064c17
ToppCellrenal_medulla_nuclei-Adult_normal_reference-Epithelial-Intermediate_tubule_epithelial_cell-kidney_loop_of_Henle_thin_ascending_limb_epithelial_cell-Degenerative_Ascending_Thin_Limb_Cell|Adult_normal_reference / Celltypes from Cells and Nuclei per compartment and clinical group

BOC NCOR2 GRIK4 MFSD10

1.29e-0417466446bd0ef7d0541386de7a901d85d53d0176dc92bf
ToppCellPBMC-Convalescent-Lymphocyte-B-B_cell-B_intermediate-B_intermediate-14|Convalescent / Location, Disease Group, Cell group, Cell class and sub_cluster (2021.03.01)

COL6A1 MYO15B CD19 OSGEP

1.32e-0417566487e557f7508c88b2087db5d57e77d5e2c92ca083
ToppCellwk_08-11-Mesenchymal-Chondrocyte|wk_08-11 / Celltypes from embryonic and fetal-stage human lung

BOC COL9A2 THBS2 LTBP1

1.35e-041766641af28b701c4598ce761f85adbd5d79e4918d265a
ToppCell356C-Fibroblasts-Fibroblast-E-|356C / Donor, Lineage, Cell class and subclass (all cells)

BOC COL6A1 THBS2 LTBP1

1.41e-04178664a493a277d175e5e153410a745b26ebe2e0839ea0
ToppCell356C-Fibroblasts-Fibroblast-E|356C / Donor, Lineage, Cell class and subclass (all cells)

BOC COL6A1 THBS2 LTBP1

1.41e-04178664371218babddfd3d8a7bb82a46ce65327ee3fcf12
ToppCellIIH-matDC|IIH / Condition, Cell_class and T cell subcluster

BOC THBS2 PNCK LTBP1

1.44e-041796645999c85ce3bab5309ff1ed154be7e32b037750b1
ToppCelldroplet-Bladder-Unstain-18m-Epithelial-granulocyte-monocyte_progenitor|Bladder / Skin_Bladder_Kidney_Mammary_Gland - method, tissue, subtissue, age, lineage, cell ontology and free annotation

ORC1 GATA1 FIGNL1 SEC14L2

1.44e-04179664804aa3899585fc7e662eff9f6d41f48655f16dd6
ToppCellIIH-matDC-|IIH / Condition, Cell_class and T cell subcluster

BOC THBS2 PNCK LTBP1

1.44e-0417966446074b2781ed79e2979428b3ec81504621d3903c
ToppCellrenal_medulla_nuclei-Adult_normal_reference-Epithelial-Intermediate_tubule_epithelial_cell-kidney_loop_of_Henle_thin_ascending_limb_epithelial_cell-Ascending_Thin_Limb_Cell|Adult_normal_reference / Celltypes from Cells and Nuclei per compartment and clinical group

BOC NCOR2 CLCNKA GRIK4

1.44e-0417966455bc69f107fc710db7617c428575792adfdbbcc1
ToppCell5'-Parenchyma_lung-Mesenchymal-Mesenchymal_Myocytic-myocytic_fibroblast|5' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5

BOC COL6A1 THBS2 LTBP1

1.50e-041816649c157de9d3403e092c907599f2a2c16db5b21131
ToppCell5'-Parenchyma_lung-Mesenchymal-Mesenchymal_Myocytic-myocytic_fibroblast-Myofibroblasts-Myofibroblasts_L.2.3.2.2|5' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5

COL6A1 THBS2 ZDHHC14 LTBP1

1.50e-04181664b116c68393d8836bac080f81a8fcbeb52e0403e7
ToppCell5'-Parenchyma_lung-Mesenchymal-Mesenchymal_Myocytic-myocytic_fibroblast-Myofibroblasts|5' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5

BOC COL6A1 THBS2 LTBP1

1.50e-04181664eea943fdcbef0bbaa8578f3296923e874893b405
ToppCellcellseq-Mesenchymal-Chondrocytic-Mesenchymal_Airway/Vascular|cellseq / Celltype signatures by Technology, Lineage, Lineage_subclass, Celltype_group, Cell_type2

BOC COL6A1 COL9A2 THBS2

1.54e-04182664bb7de0c93d8f59f13c990e425139b9348ca8027e
ToppCellwk_08-11-Mesenchymal-Chondrocyte-ASPN+_chondrocyte|wk_08-11 / Celltypes from embryonic and fetal-stage human lung

BOC COL9A2 THBS2 LTBP1

1.54e-041826640e52ba34e179d9bfaac7b49920b44c710b2b8dad
ToppCellcellseq-Mesenchymal-Chondrocytic-Mesenchymal_Airway/Vascular-Chondrocyte|cellseq / Celltype signatures by Technology, Lineage, Lineage_subclass, Celltype_group, Cell_type2

BOC COL6A1 COL9A2 THBS2

1.54e-04182664507f095af4dff60f2c2b64d750477154084c3595
ToppCellcellseq-Mesenchymal-Chondrocytic|cellseq / Celltype signatures by Technology, Lineage, Lineage_subclass, Celltype_group, Cell_type2

BOC COL6A1 COL9A2 THBS2

1.54e-0418266488bd17c07bd8443a0ede4e9dc7bc9d1230b42211
ToppCellrenal_medulla_nuclei-Adult_normal_reference-Epithelial-Intermediate_tubule_epithelial_cell-kidney_loop_of_Henle_thin_ascending_limb_epithelial_cell|Adult_normal_reference / Celltypes from Cells and Nuclei per compartment and clinical group

BOC NCOR2 CLCNKA GRIK4

1.57e-0418366483592c332b1e82673f993d37c7f480befdc3dcda
ToppCellB_cells-ISG-high_B_cells|World / Immune cells in Kidney/Urine in Lupus Nephritis

CD19 RTCB IRF7 DNAH8

1.57e-04183664dc2b00e920efa1dcc2a6265cd1024e3249c9974f
ToppCell5'-Parenchyma_lung-Mesenchymal-Mesenchymal_Myocytic-myocytic_fibroblast-Myofibroblasts-Myofibroblasts_L.2.3.2.0|5' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5

BOC COL6A1 THBS2 LTBP1

1.57e-04183664bc7dd6a40ec9c773d005c1a46f305d40cdd0a326
ToppCell343B-Lymphocytic-CD4_T-cell-Proliferating_T_cell|CD4_T-cell / Donor, Lineage, Cell class and subclass (all cells)

ORC1 SELENBP1 GATA1 ZC3H12C

1.57e-04183664f03d87b556a3d50360d4eb6126b3466fe7266677
ToppCelldroplet-Lung-immune-endo-depleted-3m-Epithelial-lung_neuroendocrine_cell|Lung / Lung_Trachea - method, tissue, subtissue, age, lineage, cell ontology and free annotation

COL9A2 LRP11 PAK3 IL22RA1

1.63e-0418566430263c558ee331e0879abcf8b4c2427ff05f9fe7
ToppCelldroplet-Spleen-nan-21m-Hematologic-megakaryocyte-erythroid_progenitor_cell|Spleen / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation

SELENBP1 GATA1 FIGNL1 SEC14L2

1.63e-04185664239cc5184825b3cc98638d4aec0a1de8e508d76c
ToppCellControl-Epithelial-Mesothelial|Epithelial / Disease state, Lineage and Cell class

COL6A1 THBS2 ZFHX4 NYAP1

1.63e-041856640af540323c0113203ba6c1a4cb32d2fb9cf79d39
ToppCellCOVID-19-Fibroblasts-Adventitial_FB|COVID-19 / group, cell type (main and fine annotations)

BOC COL6A1 THBS2 IL1R1

1.63e-04185664a5aebf2b9b05b550d021272731d68af9a6b1229d
ToppCelldroplet-Lung-immune-endo-depleted-3m-Epithelial-Neuroendocrine|Lung / Lung_Trachea - method, tissue, subtissue, age, lineage, cell ontology and free annotation

COL9A2 LRP11 PAK3 IL22RA1

1.63e-041856641b000ca11970db8f347eb97ff44605d562aea70a
ToppCell5'-Adult-Appendix-Mesenchymal-fibroblastic-mLN_Stroma_(FMO2+)|Adult / Celltypes from developing, pediatric, Crohn's, & adult GI tract

BOC COL6A1 THBS2 ZFHX4

1.67e-041866647582b5154d8e5a4434817b5ab77a10b789ea2288
ToppCellPCW_10-12-Mesenchymal-Mesenchymal_fibroblastic-mes_Arw_fibro_(16)|PCW_10-12 / Celltypes from embryonic and fetal-stage human lung

BOC THBS2 PAK3 LTBP1

1.70e-041876645258674d0346e5c51a4b965efcdc1790c970845d
ToppCellPCW_07-8.5-Mesenchymal-Mesenchymal_fibroblastic-mes_immature3_(17)|PCW_07-8.5 / Celltypes from embryonic and fetal-stage human lung

COL6A1 ZDHHC14 GRIK4 IL1R1

1.70e-04187664a9316e2818217ec5feae9cf8816f7249803caee6
ToppCelldroplet-Spleen-nan-18m-Hematologic-megakaryocyte-erythroid_progenitor_cell|Spleen / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation

SELENBP1 GATA1 IL22RA1 FIGNL1

1.70e-04187664c81d11d9fdc22dc39222f62c2888025c2e8c3e65
ToppCellFetal_29-31_weeks-Mesenchymal-myofibroblast_cell|Fetal_29-31_weeks / Lineage, Cell type, age group and donor

COL6A1 THBS2 LTBP1 IL1R1

1.70e-04187664c104fbfef2d0bef64077ac721edf2379fd59d547
ToppCellrenal_cortex_nuclei-Renal_AKI_(acute_kidney_injury)-Mesenchymal-Fibroblast-kidney_interstitial_fibroblast-Adaptive_/_Maladaptive_/_Repairing_Fibroblast|Renal_AKI_(acute_kidney_injury) / Celltypes from Cells and Nuclei per compartment and clinical group

BOC ZFHX4 PAK3 LTBP1

1.74e-04188664ce85a56ac27a6432421dde93a1bafa8b943244b9
ToppCellCOVID-19-Heart-Fib_1|COVID-19 / Disease (COVID-19 only), tissue and cell type

BOC COL6A1 THBS2 LTBP1

1.74e-04188664fe361215f4ba841aa5e1e581fb56f2f4d3ccd201
ToppCellmetastatic_Lymph_Node-B_lymphocytes-Undetermined|metastatic_Lymph_Node / Location, Cell class and cell subclass

BOC CD19 MYCBP2 IRF7

1.74e-041886640ddc5dbe2fd905fee20c33d9845629e259faacd9
ToppCelldroplet-Marrow-BM-30m-Hematologic-erythroblast|Marrow / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation

ORC1 GATA1 FIGNL1 SEC14L2

1.74e-04188664f1a9d8ea174a4bef0fae8188e3bd96b7ac1a39bb
ToppCellMesenchymal-chondrocyte|World / Lineage, Cell type, age group and donor

BOC COL6A1 COL9A2 GRIK2

1.74e-041886647b1e3f8a941eaa68e89c562129a92314642eec66
ToppCelldroplet-Lung-21m-Mesenchymal-myofibroblast-myofibroblast_cell-pulmonary_interstitial_myofibroblast|21m / method, tissue, age, lineage, sublineage, cell ontologies, cell type and subtype

BOC COL6A1 THBS2 GRIK4

1.77e-04189664cd42ce4aa217d0bd95e0cc0ba357bdfeb3e55a48
ToppCellCOPD-Epithelial-Mesothelial|COPD / Disease state, Lineage and Cell class

COL6A1 THBS2 SELENBP1 IL1R1

1.77e-0418966479bb2593ad5d17f94b17972884241f03a0f43770
ToppCelldroplet-Lung-21m-Mesenchymal-myofibroblast-myofibroblast_cell|21m / method, tissue, age, lineage, sublineage, cell ontologies, cell type and subtype

BOC COL6A1 THBS2 GRIK4

1.77e-04189664102501eee7760d5882dec41ea9d00147b3f4fb73
ToppCellMesenchymal-myofibroblast_cell|World / Lineage, Cell type, age group and donor

COL6A1 THBS2 LTBP1 IL1R1

1.77e-0418966444e37f88137bb249933eb615235b2cf2ae7f3925
ToppCell5'-Parenchyma_lung-Mesenchymal-Fibroblastic-fibroblastic_type_1-Adventitial_fibroblasts-Adventitial_fibroblasts_L.2.1.2.1|5' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5

BOC COL6A1 THBS2 LTBP1

1.77e-04189664d531399749409d614adca13d181830c6e3287508
ToppCellwk_15-18-Mesenchymal-Fibroblast-Airway_fibro|wk_15-18 / Celltypes from embryonic and fetal-stage human lung

BOC COL6A1 THBS2 LTBP1

1.77e-041896644f9608b84d135268a17455661870c46ae8554a24
ToppCellprimary_auditory_cortex_(A1C)-Non-neuronal-Macroglial|primary_auditory_cortex_(A1C) / Sample groups (6 Anatomical region groups), with 5 level hierarchy of cell types

COL9A2 MYO15B ZFHX4 ITPKB

1.77e-04189664784ace2be87f2ecb19490f4974f63a559516e0eb
ToppCell10x5'v1-week_14-16-Mesenchymal_fibro-stroma|week_14-16 / cell types per 3 fetal stages;per 3',per 5'

BOC COL6A1 THBS2 ZFHX4

1.77e-04189664eccf3d49354a67c94f1ed7c15a98a48a5e8e2ed0
ToppCellSomatosensory_Cortex_(S1)-Non-neuronal|Somatosensory_Cortex_(S1) / Sample groups (6 Anatomical region groups), with 5 level hierarchy of cell types

COL9A2 MYO15B ZFHX4 ITPKB

1.77e-0418966442ab4cc5fbf8580841f31889446fe4499df1a464
ToppCell10x5'v1-week_14-16-Mesenchymal_fibro|week_14-16 / cell types per 3 fetal stages;per 3',per 5'

BOC COL6A1 THBS2 ZFHX4

1.77e-0418966440764f461b8aa1d3a2c5a30590b7fb9307d47d09
ToppCelldroplet-Marrow-nan-24m-Hematologic-erythroblast|Marrow / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation

ORC1 GATA1 FIGNL1 SEC14L2

1.77e-0418966498ace332c3c046694c6ade47de8c8bf57ec51271
ToppCelldroplet-Marrow-nan-3m-Hematologic-erythroblast|Marrow / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation

ORC1 GATA1 FIGNL1 SEC14L2

1.77e-041896648a38baee58a27c2fa3f4bd131ab9f15723ed9295
DiseaseIntervertebral disc disorder

COL9A2 THBS2

7.13e-056652C0158252
Diseasemyelofibrosis (implicated_via_orthology)

NCOR2 GATA1

7.13e-056652DOID:4971 (implicated_via_orthology)
DiseasePsychotic Disorders

SELENBP1 GRIK4 BCL9 NPAS1

7.46e-05101654C0033975
DiseaseCongenital muscular dystrophy

COL6A1 RYR1

3.11e-0412652cv:C0699743
DiseaseInborn Errors of Metabolism

AGXT2 SELENBP1

6.36e-0417652C0025521
Diseaseresponse to citalopram, antidepressant-induced dizziness, response to buspirone, response to antidepressant

NTMT1 ZDHHC14

6.36e-0417652EFO_0006321, EFO_0006329, EFO_0006330, GO_0036276
Diseaseexercise test

ZC3H12C LRIT3

8.85e-0420652EFO_0004328
DiseaseAdenocarcinoma of large intestine

PAK3 PRKCZ ATM

1.26e-0396653C1319315
DiseaseAgouti-related protein measurement

ESRP2 CDH3

1.62e-0327652EFO_0008016
Diseasecongestive heart failure (is_implicated_in)

AGXT2 RYR1

1.62e-0327652DOID:6000 (is_implicated_in)

Protein segments in the cluster

PeptideGeneStartEntry
GTYKMELPGGTGCQP

AGXT2

211

Q9BYV1
YVVMCRTGGPGPKGI

ACAD8

201

Q9UKU7
VGEPGYCPVRLGMTT

BRD7

361

Q9NPI1
KGQGVYLGMPGCLPV

ERP29

146

P30040
PGAEPEKMGGAGTVC

C1orf216

91

Q8TAB5
SCPVYMGGPLGTAKL

DNHD1

4706

Q96M86
GPCAAGVVGIKMPRY

GUCY2C

926

P25092
MAAPYPGSGGGSEVK

NPAS1

1

Q99742
GYGSPGQKGTVMGTL

MFSD10

386

Q14728
MKTPRCGVPDVGQYG

MMP27

86

Q9H306
CPLGGTLDGVYPTLM

NCOR2

1916

Q9Y618
YGSQMCPGKLPEGIP

PAK3

96

O75914
EQNGGMQCKPYGAGP

FIGNL1

351

Q6PIW4
GPPGSGKTTYCLGMS

GPN2

16

Q9H9Y4
QEDCPGPGSGGYSAM

LRP11

86

Q86VZ4
PPQMGEIISCCGGTY

MDC1

2011

Q14676
CGGPHTAVGTKYGMP

DOLPP1

86

Q86YN1
PGMVCAGVPQGGKDS

KLK14

201

Q9P0G3
SACAMGGPGTKSGEP

DNAAF2

506

Q9NVR5
ETCTGAGYPQGKRMG

GSPT2

91

Q8IYD1
KEICPGGMGYTVSGV

LTBP1

726

Q14766
IGSTYGPPGGRKMTV

DNAH8

2506

Q96JB1
PGGQYMACVCPKGVP

LRIT3

546

Q3SXY7
MGKCKVYWEVGGPPG

IRF7

371

Q92985
IDCIAYTKGPGMGAP

OSGEP

71

Q9NPF4
GNMLGTACGTPGYVA

PNCK

166

Q6P2M8
MKGGGAIGPTQQGYP

MYO15B

806

Q96JP2
TGGCMYISGVPGTGK

ORC1

526

Q13415
TVGYGDMCPTTPGGK

KCNA10

421

Q16322
GQANTGCYGIPGMPG

C1QC

26

P02747
QVYPLLNCMEGIPGG

GATA1

76

P15976
LNCMEGIPGGSPYAG

GATA1

81

P15976
DSLYGCGGGKMLQPI

ATM

2016

Q13315
GAYVGQEPGMQLSPG

BOC

1086

Q9BWV1
DGVKGEMGYPGLPGC

COL6A1

331

P12109
MGGFYLCQPGPPSEK

CD19

91

P15391
NKIVGIGYNGMPNGC

DCTD

46

P32321
GMIPGKDRGPAGLYT

BCL9

1356

O00512
YKGMVGAIGATGPPG

COL9A2

251

Q14055
PSYGVCMEGSGKDSP

IL22RA1

401

Q8N6P7
GGLIDSKGYGVGTPM

GRIK2

756

Q13002
GGLLDTKGYGIGMPV

GRIK4

741

Q16099
PPEVIQQYLSGGMCG

SEC14L2

76

O76054
YGGTMTDPDGNPKCK

SEC14L2

241

O76054
EGMGPPEIKYGESLC

RYR1

331

P21817
KLPVAGDGGLVCPYM

IL1R1

131

P14778
EPGQALGKVFMGCPG

CDH3

46

P22223
TCQVGMKPPVPGGYT

NXPE1

306

Q8N323
GVLNKGCGVGAPSPM

NYAP1

571

Q6ZVC0
KQIPPTVDGMLGGYG

NTMT1

21

Q9BV86
GQPVLIGGTMGTCSY

RTCB

396

Q9Y3I0
GVLMYGPPGCGKTML

PSMC4

201

P43686
TGVKMLDTQGPPGCG

TAF1C

406

Q15572
YLPCGMPGSGEPEVG

ITPKB

376

P27987
GNCGPGYSTPLEAMK

SELENBP1

6

Q13228
GGPGMYKVVKTGPSG

MYCBP2

2586

O75592
LGGGPYMLCTDGQQL

ESRP2

121

Q9H6T0
GVTNPIMPGGYALAG

CLCNKA

456

P51800
LTGFSGMKGUGCKVP

SEPHS2

51

Q99611
GTVQGGYFPPVCGME

ZFHX4

3231

Q86UP3
MGLPCVQTSGYQGGE

ZBTB5

486

O15062
MPPGGGGPMKDCEYS

ZDHHC14

1

Q8IZN3
GDTICKGGEMPQGIY

SLC9C2

891

Q5TAH2
MPGGGSQEYGVLCIQ

ZC3H12C

1

Q9C0D7
SPVPQMGGKNCKGSG

THBS2

466

P35442
PEPGGGSGMLQYLQS

VPS13D

421

Q5THJ4
KLTDYGMCKEGLGPG

PRKCZ

391

Q05513
MPPANGYIHKGTDGG

LRIG2

881

O94898