Cluster composition

Functions

Category	Name	IntersectionWithQuery	PValue	GenesInTerm	GenesInQuery	GenesInTermInQuery	ID
GeneOntologyMolecularFunction	minus-end-directed microtubule motor activity	DNAH2 DNAH5 DYNC1H1	8.08e-05	18	95	3	GO:0008569
GeneOntologyMolecularFunction	actin binding	SPTBN4 MYH6 SYNE3 DST SYNE1 ESPNL MACF1 DMD MYO18B UTRN	9.39e-05	479	95	10	GO:0003779
GeneOntologyMolecularFunction	actin filament binding	SPTBN4 MYH6 SYNE3 SYNE1 ESPNL MACF1 MYO18B	1.06e-04	227	95	7	GO:0051015
GeneOntologyMolecularFunction	cytoskeleton-nuclear membrane anchor activity	SYNE3 SYNE1	2.22e-04	5	95	2	GO:0140444
GeneOntologyMolecularFunction	cytoskeletal motor activity	MYH6 DNAH2 MYO18B DNAH5 DYNC1H1	2.51e-04	118	95	5	GO:0003774
GeneOntologyMolecularFunction	dynein light intermediate chain binding	DNAH2 DNAH5 DYNC1H1	3.14e-04	28	95	3	GO:0051959
GeneOntologyMolecularFunction	dynein intermediate chain binding	DNAH2 DNAH5 DYNC1H1	7.21e-04	37	95	3	GO:0045505
GeneOntologyMolecularFunction	ATP hydrolysis activity	DNAH2 MACF1 DHX33 DNAH5 ABCA9 ABCG5 DYNC1H1 HSP90AA4P	1.21e-03	441	95	8	GO:0016887
GeneOntologyMolecularFunction	protein-membrane adaptor activity	SPTBN4 SYNE3 SYNE1	1.28e-03	45	95	3	GO:0043495
GeneOntologyMolecularFunction	dipeptidyl-peptidase activity	DPP4 DPP10	1.43e-03	12	95	2	GO:0008239
GeneOntologyBiologicalProcess	response to curcumin	PLCG1 ITGAM	2.10e-05	2	95	2	GO:1904643
GeneOntologyBiologicalProcess	axonemal dynein complex assembly	ODAD1 DNAH2 CCDC65 DNAH5	3.75e-05	41	95	4	GO:0070286
GeneOntologyBiologicalProcess	regulation of peptidyl-serine phosphorylation	SPTBN4 AKAP9 PPM1F SH2D3C FNIP1 DMD	4.12e-05	137	95	6	GO:0033135
GeneOntologyBiologicalProcess	nucleus localization	SYNE3 SYNE1 DMD DYNC1H1	4.98e-05	44	95	4	GO:0051647
GeneOntologyBiologicalProcess	regulation of mesenchymal cell apoptotic process	MSX1 MSX2 SYNE1	6.14e-05	17	95	3	GO:2001053
GeneOntologyBiologicalProcess	regionalization	MSX1 MSX2 IFT140 SOSTDC1 VAX2 DLX2 PAX7 EMX1 ITGAM DNAH5	7.07e-05	478	95	10	GO:0003002
GeneOntologyBiologicalProcess	mesenchymal cell apoptotic process	MSX1 MSX2 SYNE1	8.69e-05	19	95	3	GO:0097152
GeneOntologyBiologicalProcess	radial glial cell differentiation	METTL3 EMX1 CDH2	1.02e-04	20	95	3	GO:0060019
GeneOntologyBiologicalProcess	positive regulation of mesenchymal cell apoptotic process	MSX1 MSX2	1.25e-04	4	95	2	GO:2001055
GeneOntologyBiologicalProcess	embryonic nail plate morphogenesis	MSX1 MSX2	1.25e-04	4	95	2	GO:0035880
GeneOntologyBiologicalProcess	pattern specification process	MSX1 MSX2 IFT140 SOSTDC1 VAX2 DLX2 PAX7 EMX1 ITGAM DNAH5	1.55e-04	526	95	10	GO:0007389
GeneOntologyCellularComponent	dynein complex	ODAD1 DNAH2 CCDC65 DNAH5 DYNC1H1	4.39e-06	54	94	5	GO:0030286
GeneOntologyCellularComponent	axonemal dynein complex	ODAD1 DNAH2 CCDC65 DNAH5	4.51e-06	25	94	4	GO:0005858
GeneOntologyCellularComponent	ruffle membrane	SH2D3C MACF1 PLCG1 PLEK ARHGEF2 WWC1	9.31e-06	108	94	6	GO:0032587
GeneOntologyCellularComponent	cell leading edge	DPP4 DST SH2D3C MACF1 PLCG1 DMD PLEK ARHGEF2 MCF2L CDH2 WWC1	1.52e-05	500	94	11	GO:0031252
GeneOntologyCellularComponent	leading edge membrane	DPP4 SH2D3C MACF1 PLCG1 PLEK ARHGEF2 WWC1	4.57e-05	210	94	7	GO:0031256
GeneOntologyCellularComponent	cell projection membrane	DPP4 SH2D3C MACF1 PLCG1 DMD PLEK ARHGEF2 UTRN WWC1	1.40e-04	431	94	9	GO:0031253
GeneOntologyCellularComponent	ruffle	SH2D3C MACF1 PLCG1 PLEK ARHGEF2 WWC1	3.37e-04	206	94	6	GO:0001726
GeneOntologyCellularComponent	plasma membrane bounded cell projection cytoplasm	IFT140 DST ODAD1 DNAH2 CCDC65 DNAH5 DYNC1H1	5.72e-04	317	94	7	GO:0032838
GeneOntologyCellularComponent	microtubule associated complex	ODAD1 DNAH2 CCDC65 DNAH5 DYNC1H1	8.05e-04	161	94	5	GO:0005875
GeneOntologyCellularComponent	microtubule organizing center attachment site	SYNE3 SYNE1	1.07e-03	11	94	2	GO:0034992
GeneOntologyCellularComponent	meiotic nuclear membrane microtubule tethering complex	SYNE3 SYNE1	1.07e-03	11	94	2	GO:0034993
GeneOntologyCellularComponent	nuclear membrane protein complex	SYNE3 SYNE1	1.07e-03	11	94	2	GO:0106083
GeneOntologyCellularComponent	nuclear membrane microtubule tethering complex	SYNE3 SYNE1	1.07e-03	11	94	2	GO:0106094
GeneOntologyCellularComponent	cytoplasmic region	IFT140 DST ODAD1 DNAH2 CCDC65 DNAH5 DYNC1H1	1.20e-03	360	94	7	GO:0099568
GeneOntologyCellularComponent	outer dynein arm	ODAD1 DNAH5	1.28e-03	12	94	2	GO:0036157
GeneOntologyCellularComponent	myosin complex	MYH6 MYH16 MYO18B	2.39e-03	59	94	3	GO:0016459
GeneOntologyCellularComponent	axoneme	IFT140 ODAD1 DNAH2 CCDC65 DNAH5	2.44e-03	207	94	5	GO:0005930
GeneOntologyCellularComponent	ciliary plasm	IFT140 ODAD1 DNAH2 CCDC65 DNAH5	2.49e-03	208	94	5	GO:0097014
Domain	Spectrin	SPTBN4 SYNE3 DST DRP2 SYNE1 MACF1 DMD MCF2L UTRN	7.97e-16	23	91	9	PF00435
Domain	Spectrin_repeat	SPTBN4 SYNE3 DST DRP2 SYNE1 MACF1 DMD MCF2L UTRN	9.53e-15	29	91	9	IPR002017
Domain	Spectrin/alpha-actinin	SPTBN4 SYNE3 DST DRP2 SYNE1 MACF1 DMD MCF2L UTRN	2.64e-14	32	91	9	IPR018159
Domain	SPEC	SPTBN4 SYNE3 DST DRP2 SYNE1 MACF1 DMD MCF2L UTRN	2.64e-14	32	91	9	SM00150
Domain	Homeobox_metazoa	MSX1 MSX2 BARHL1 HMX3 NKX1-1 VAX2 DLX2 HMX1 EMX1 NKX1-2	1.89e-11	90	91	10	IPR020479
Domain	Homeobox_CS	MSX1 MSX2 BARHL1 HMX3 NKX1-1 VAX2 DLX2 PAX7 HMX1 EMX1 HOXB13 NKX1-2	1.06e-10	186	91	12	IPR017970
Domain	Actinin_actin-bd_CS	SPTBN4 DST SYNE1 MACF1 DMD UTRN	1.07e-09	23	91	6	IPR001589
Domain	ACTININ_2	SPTBN4 DST SYNE1 MACF1 DMD UTRN	1.07e-09	23	91	6	PS00020
Domain	ACTININ_1	SPTBN4 DST SYNE1 MACF1 DMD UTRN	1.07e-09	23	91	6	PS00019
Domain	Homeobox	MSX1 MSX2 BARHL1 HMX3 NKX1-1 VAX2 DLX2 PAX7 HMX1 EMX1 HOXB13 NKX1-2	1.49e-09	234	91	12	PF00046
Domain	HOMEOBOX_1	MSX1 MSX2 BARHL1 HMX3 NKX1-1 VAX2 DLX2 PAX7 HMX1 EMX1 HOXB13 NKX1-2	1.64e-09	236	91	12	PS00027
Domain	HOX	MSX1 MSX2 BARHL1 HMX3 NKX1-1 VAX2 DLX2 PAX7 HMX1 EMX1 HOXB13 NKX1-2	1.72e-09	237	91	12	SM00389
Domain	HOMEOBOX_2	MSX1 MSX2 BARHL1 HMX3 NKX1-1 VAX2 DLX2 PAX7 HMX1 EMX1 HOXB13 NKX1-2	1.89e-09	239	91	12	PS50071
Domain	Homeobox_dom	MSX1 MSX2 BARHL1 HMX3 NKX1-1 VAX2 DLX2 PAX7 HMX1 EMX1 HOXB13 NKX1-2	1.89e-09	239	91	12	IPR001356
Domain	HTH_motif	MSX1 MSX2 BARHL1 VAX2 DLX2 HMX1 EMX1	4.35e-08	69	91	7	IPR000047
Domain	Homeodomain-like	MSX1 MSX2 BARHL1 HMX3 NKX1-1 VAX2 DLX2 PAX7 HMX1 EMX1 HOXB13 NKX1-2	7.33e-08	332	91	12	IPR009057
Domain	-	MSX1 MSX2 BARHL1 HMX3 VAX2 DLX2 PAX7 HMX1 EMX1 HOXB13 NKX1-2	1.29e-07	283	91	11	1.10.10.60
Domain	CH	SPTBN4 DST SYNE1 MACF1 DMD UTRN	7.42e-07	65	91	6	SM00033
Domain	CH	SPTBN4 DST SYNE1 MACF1 DMD UTRN	1.16e-06	70	91	6	PF00307
Domain	-	SPTBN4 DST SYNE1 MACF1 DMD UTRN	1.26e-06	71	91	6	1.10.418.10
Domain	CH	SPTBN4 DST SYNE1 MACF1 DMD UTRN	1.48e-06	73	91	6	PS50021
Domain	CH-domain	SPTBN4 DST SYNE1 MACF1 DMD UTRN	1.74e-06	75	91	6	IPR001715
Domain	EF-hand_dom_typ1	DRP2 DMD UTRN	2.21e-06	6	91	3	IPR015153
Domain	EF-hand_dom_typ2	DRP2 DMD UTRN	2.21e-06	6	91	3	IPR015154
Domain	EF-hand_2	DRP2 DMD UTRN	2.21e-06	6	91	3	PF09068
Domain	EF-hand_3	DRP2 DMD UTRN	2.21e-06	6	91	3	PF09069
Domain	WW	DRP2 HECW2 DMD UTRN WWC1	3.21e-06	47	91	5	PF00397
Domain	WW	DRP2 HECW2 DMD UTRN WWC1	3.57e-06	48	91	5	SM00456
Domain	WW_DOMAIN_2	DRP2 HECW2 DMD UTRN WWC1	4.84e-06	51	91	5	PS50020
Domain	WW_DOMAIN_1	DRP2 HECW2 DMD UTRN WWC1	4.84e-06	51	91	5	PS01159
Domain	WW_dom	DRP2 HECW2 DMD UTRN WWC1	5.33e-06	52	91	5	IPR001202
Domain	DHC_N1	DNAH2 DNAH5 DYNC1H1	6.16e-06	8	91	3	PF08385
Domain	Dynein_heavy_dom-1	DNAH2 DNAH5 DYNC1H1	6.16e-06	8	91	3	IPR013594
Domain	Dystrophin	DMD UTRN	2.35e-05	2	91	2	IPR016344
Domain	Dynein_heavy_chain_D4_dom	DNAH2 DNAH5 DYNC1H1	3.92e-05	14	91	3	IPR024317
Domain	Dynein_HC_stalk	DNAH2 DNAH5 DYNC1H1	3.92e-05	14	91	3	IPR024743
Domain	Dynein_heavy_dom-2	DNAH2 DNAH5 DYNC1H1	3.92e-05	14	91	3	IPR013602
Domain	DHC_N2	DNAH2 DNAH5 DYNC1H1	3.92e-05	14	91	3	PF08393
Domain	MT	DNAH2 DNAH5 DYNC1H1	3.92e-05	14	91	3	PF12777
Domain	AAA_8	DNAH2 DNAH5 DYNC1H1	3.92e-05	14	91	3	PF12780
Domain	ATPase_dyneun-rel_AAA	DNAH2 DNAH5 DYNC1H1	3.92e-05	14	91	3	IPR011704
Domain	AAA_5	DNAH2 DNAH5 DYNC1H1	3.92e-05	14	91	3	PF07728
Domain	DHC_fam	DNAH2 DNAH5 DYNC1H1	4.88e-05	15	91	3	IPR026983
Domain	Dynein_heavy_dom	DNAH2 DNAH5 DYNC1H1	4.88e-05	15	91	3	IPR004273
Domain	Dynein_heavy	DNAH2 DNAH5 DYNC1H1	4.88e-05	15	91	3	PF03028
Domain	PH	SPTBN4 OSBPL8 PHLPP1 PLCG1 PLEK ARHGEF2 MCF2L TECPR1	6.36e-05	278	91	8	SM00233
Domain	PH_DOMAIN	SPTBN4 OSBPL8 PHLPP1 PLCG1 PLEK ARHGEF2 MCF2L TECPR1	6.53e-05	279	91	8	PS50003
Domain	PH_domain	SPTBN4 OSBPL8 PHLPP1 PLCG1 PLEK ARHGEF2 MCF2L TECPR1	6.69e-05	280	91	8	IPR001849
Domain	ZZ	DRP2 DMD UTRN	8.66e-05	18	91	3	PF00569
Domain	ZF_ZZ_2	DRP2 DMD UTRN	8.66e-05	18	91	3	PS50135
Domain	ZF_ZZ_1	DRP2 DMD UTRN	8.66e-05	18	91	3	PS01357
Domain	Znf_ZZ	DRP2 DMD UTRN	1.02e-04	19	91	3	IPR000433
Domain	ZnF_ZZ	DRP2 DMD UTRN	1.02e-04	19	91	3	SM00291
Domain	-	SPTBN4 OSBPL8 PHLPP1 PLCG1 PLEK ARHGEF2 MCF2L RGS3 TECPR1	1.22e-04	391	91	9	2.30.29.30
Domain	PH	SPTBN4 OSBPL8 PHLPP1 PLCG1 PLEK ARHGEF2 MCF2L	1.28e-04	229	91	7	PF00169
Domain	KASH	SYNE3 SYNE1	1.40e-04	4	91	2	PF10541
Domain	KASH	SYNE3 SYNE1	1.40e-04	4	91	2	IPR012315
Domain	KASH	SYNE3 SYNE1	1.40e-04	4	91	2	PS51049
Domain	KASH	SYNE3 SYNE1	1.40e-04	4	91	2	SM01249
Domain	PH_dom-like	SPTBN4 OSBPL8 PHLPP1 PLCG1 PLEK ARHGEF2 MCF2L RGS3 TECPR1	2.31e-04	426	91	9	IPR011993
Domain	-	RASGRP1 DST DRP2 MACF1 PLCG1 DMD UTRN	2.86e-04	261	91	7	1.10.238.10
Domain	-	DPP4 DPP10	3.48e-04	6	91	2	2.140.10.30
Domain	-	DST MACF1	3.48e-04	6	91	2	3.90.1290.10
Domain	DPPIV_N	DPP4 DPP10	3.48e-04	6	91	2	PF00930
Domain	GAR	DST MACF1	3.48e-04	6	91	2	PS51460
Domain	-	DST MACF1	3.48e-04	6	91	2	3.30.920.20
Domain	GAS_dom	DST MACF1	3.48e-04	6	91	2	IPR003108
Domain	Peptidase_S9B_N	DPP4 DPP10	3.48e-04	6	91	2	IPR002469
Domain	GAS2	DST MACF1	3.48e-04	6	91	2	PF02187
Domain	GAS2	DST MACF1	3.48e-04	6	91	2	SM00243
Domain	Plectin_repeat	DST MACF1	4.85e-04	7	91	2	IPR001101
Domain	Plectin	DST MACF1	4.85e-04	7	91	2	PF00681
Domain	PLEC	DST MACF1	4.85e-04	7	91	2	SM00250
Domain	EF-hand-dom_pair	RASGRP1 DST DRP2 MACF1 PLCG1 DMD UTRN	5.06e-04	287	91	7	IPR011992
Domain	AAA+_ATPase	DNAH2 DNAH5 ABCA9 ABCG5 DYNC1H1	6.94e-04	144	91	5	IPR003593
Domain	AAA	DNAH2 DNAH5 ABCA9 ABCG5 DYNC1H1	6.94e-04	144	91	5	SM00382
Domain	Peptidase_S9	DPP4 DPP10	1.25e-03	11	91	2	PF00326
Domain	Peptidase_S9	DPP4 DPP10	1.25e-03	11	91	2	IPR001375
Domain	PP2C	PPM1F PHLPP1	3.80e-03	19	91	2	PF00481
Domain	Myosin-like_IQ_dom	MYH6 MYO18B	3.80e-03	19	91	2	IPR027401
Domain	-	MYH6 MYO18B	3.80e-03	19	91	2	4.10.270.10
Domain	C2	HECW2 PLCG1 RGS3 WWC1	3.86e-03	131	91	4	PF00168
Domain	PP2Cc	PPM1F PHLPP1	4.21e-03	20	91	2	SM00332
Domain	PPM-type_phosphatase_dom	PPM1F PHLPP1	4.21e-03	20	91	2	IPR001932
Domain	-	PPM1F PHLPP1	4.21e-03	20	91	2	3.60.40.10
Domain	PPM_2	PPM1F PHLPP1	4.21e-03	20	91	2	PS51746
Domain	Butyrophylin	TRIM34 TRIM16L TRIM48	4.84e-03	70	91	3	IPR003879
Pubmed	Disrupted in Schizophrenia 1 Interactome: evidence for the close connectivity of risk genes and a potential synaptic basis for schizophrenia.	DST AKAP9 SYNE1 MACF1 DMD UTRN CCDC136 DYNC1H1 WWC1	4.05e-10	151	96	9	17043677
Pubmed	HENA, heterogeneous network-based data set for Alzheimer's disease.	DST AKAP9 SYNE1 MACF1 PLCG1 DMD DYNC1H1	4.51e-08	120	96	7	31413325
Pubmed	Patterning of the murine dentition by homeobox genes.	MSX1 MSX2 DLX2	8.14e-08	4	96	3	9541203
Pubmed	Cloning and characterization of mouse ACF7, a novel member of the dystonin subfamily of actin binding proteins.	DST MACF1 DMD	8.14e-08	4	96	3	8954775
Pubmed	14-3-3 interacts with regulator of G protein signaling proteins and modulates their activity.	MSX1 YWHAB RGS3	2.03e-07	5	96	3	10862767
Pubmed	Specific disruption of a schwann cell dystrophin-related protein complex in a demyelinating neuropathy.	DRP2 DMD UTRN	2.03e-07	5	96	3	11430802
Pubmed	Postnatal lethality in mice lacking the Sax2 homeobox gene homologous to Drosophila S59/slouch: evidence for positive and negative autoregulation.	NKX1-1 HMX1 CDH2 NKX1-2	3.84e-07	22	96	4	14645517
Pubmed	Heterodimerization of Msx and Dlx homeoproteins results in functional antagonism.	MSX1 MSX2 DLX2	4.05e-07	6	96	3	9111364
Pubmed	Variation of tooth number in mammalian dentition: connecting genetics, development, and evolution.	MSX1 MSX2 DLX2	4.05e-07	6	96	3	12752768
Pubmed	Expression of the dystrophin-related protein 2 (Drp2) transcript in the mouse.	DRP2 DMD UTRN	4.05e-07	6	96	3	9245586
Pubmed	Developmental regulation of gonadotropin-releasing hormone gene expression by the MSX and DLX homeodomain protein families.	MSX1 MSX2 DLX2	4.05e-07	6	96	3	15743757
Pubmed	Inactivation of Sirt6 ameliorates muscular dystrophy in mdx mice by releasing suppression of utrophin expression.	PAX7 DMD UTRN	4.05e-07	6	96	3	35859073
Pubmed	Contribution of the different modules in the utrophin carboxy-terminal region to the formation and regulation of the DAP complex.	DRP2 DMD UTRN	4.05e-07	6	96	3	10767429
Pubmed	The cardiac homeobox gene Csx/Nkx2.5 lies genetically upstream of multiple genes essential for heart development.	MSX1 MSX2 MYH6 CDH2	5.55e-07	24	96	4	10021345
Pubmed	Wnt signaling determines ventral spinal cord cell fates in a time-dependent manner.	MSX1 MSX2 PAX7 CDH2	6.59e-07	25	96	4	18927156
Pubmed	A signaling cascade involving endothelin-1, dHAND and msx1 regulates development of neural-crest-derived branchial arch mesenchyme.	MSX1 MSX2 DLX2	7.08e-07	7	96	3	9671575
Pubmed	Restriction of BMP4 activity domains in the developing neural tube of the mouse embryo.	MSX1 MSX2 PAX7	7.08e-07	7	96	3	15218525
Pubmed	Screening large numbers of expression patterns of transcription factors in late stages of the mouse thymus.	MSX1 MSX2 BARHL1 HMX3 PAX7 HMX1 HOXB13 NKX1-2	7.18e-07	263	96	8	20932939
Pubmed	Roles for Msx and Dlx homeoproteins in vertebrate development.	MSX1 MSX2 DLX2	1.13e-06	8	96	3	10773441
Pubmed	Interactions between BMP-7 and USAG-1 (uterine sensitization-associated gene-1) regulate supernumerary organ formations.	MSX1 SOSTDC1 DLX2	1.69e-06	9	96	3	24816837
Pubmed	Pioneering function of Isl1 in the epigenetic control of cardiomyocyte cell fate.	MSX1 MSX2 PAX7 DMD	2.37e-06	34	96	4	31024170
Pubmed	Genomic Resolution of DLX-Orchestrated Transcriptional Circuits Driving Development of Forebrain GABAergic Neurons.	NRXN3 DLX2 PAX7	2.41e-06	10	96	3	31433982
Pubmed	Distal-less and other homeobox genes in the development of the dentition.	MSX1 MSX2 DLX2	2.41e-06	10	96	3	7964557
Pubmed	Dlx and other homeobox genes in the morphological development of the dentition.	MSX1 MSX2 DLX2	2.41e-06	10	96	3	7554933
Pubmed	Zic1 promotes the expansion of dorsal neural progenitors in spinal cord by inhibiting neuronal differentiation.	MSX1 MSX2 PAX7	3.31e-06	11	96	3	11944941
Pubmed	Msx1 is required for dorsal diencephalon patterning.	MSX1 MSX2 PAX7	3.31e-06	11	96	3	12874124
Pubmed	gamma-Syntrophin scaffolding is spatially and functionally distinct from that of the alpha/beta syntrophins.	DRP2 DMD UTRN	3.31e-06	11	96	3	16857187
Pubmed	Comparative gene expression analysis of genital tubercle development reveals a putative appendicular Wnt7 network for the epidermal differentiation.	MSX1 MSX2 SOSTDC1 TRPM1	3.36e-06	37	96	4	20510229
Pubmed	USP7 targets XIAP for cancer progression: Establishment of a p53-independent therapeutic avenue for glioma.	DST SYNE1 SNX25 MACF1 EEA1 DMD DNAH5	4.09e-06	234	96	7	36243803
Pubmed	Pax3 and Pax7 play essential safeguard functions against environmental stress-induced birth defects.	MSX1 DLX2 PAX7	4.40e-06	12	96	3	25800090
Pubmed	Jumonji, a nuclear protein that is necessary for normal heart development.	MSX1 MSX2 MYH6	4.40e-06	12	96	3	10807864
Pubmed	Lrp6-mediated canonical Wnt signaling is required for lip formation and fusion.	MSX1 MSX2 SOSTDC1	4.40e-06	12	96	3	19700620
Pubmed	Enhanced BMP signaling results in supernumerary tooth formation in USAG-1 deficient mouse.	MSX1 SOSTDC1 DLX2	5.71e-06	13	96	3	18329379
Pubmed	Genetic dissection of Pitx2 in craniofacial development uncovers new functions in branchial arch morphogenesis, late aspects of tooth morphogenesis and cell migration.	MSX1 MSX2 DLX2	5.71e-06	13	96	3	14623826
Pubmed	Graded phenotypic response to partial and complete deficiency of a brain-specific transcript variant of the winged helix transcription factor RFX4.	MSX2 DLX2 EMX1	5.71e-06	13	96	3	12925582
Pubmed	Wnt/beta-catenin signaling directs multiple stages of tooth morphogenesis.	MSX1 MSX2 SOSTDC1	7.26e-06	14	96	3	18022614
Pubmed	Identification of dynein heavy chain genes expressed in human and mouse testis: chromosomal localization of an axonemal dynein gene.	DNAH2 DNAH5 DYNC1H1	7.26e-06	14	96	3	9373155
Pubmed	Decreased myocardial nNOS, increased iNOS and abnormal ECGs in mouse models of Duchenne muscular dystrophy.	DMD UTRN	7.54e-06	2	96	2	10525423
Pubmed	Insertional mutation of the mouse Msx1 homeobox gene by an nlacZ reporter gene.	MSX1 MSX2	7.54e-06	2	96	2	9256350
Pubmed	In Vivo Genome Editing Restores Dystrophin Expression and Cardiac Function in Dystrophic Mice.	DMD UTRN	7.54e-06	2	96	2	28790199
Pubmed	Metabolic dysfunction and altered mitochondrial dynamics in the utrophin-dystrophin deficient mouse model of duchenne muscular dystrophy.	DMD UTRN	7.54e-06	2	96	2	25859846
Pubmed	Msx1 and Msx2 gene expression is downregulated in the cadmium-induced omphalocele in the chick model.	MSX1 MSX2	7.54e-06	2	96	2	20620318
Pubmed	G-utrophin, the autosomal homologue of dystrophin Dp116, is expressed in sensory ganglia and brain.	DMD UTRN	7.54e-06	2	96	2	7731967
Pubmed	Role of dystrophin and utrophin for assembly and function of the dystrophin glycoprotein complex in non-muscle tissue.	DMD UTRN	7.54e-06	2	96	2	16710609
Pubmed	Nonclinical Exon Skipping Studies with 2'-O-Methyl Phosphorothioate Antisense Oligonucleotides in mdx and mdx-utrn-/- Mice Inspired by Clinical Trial Results.	DMD UTRN	7.54e-06	2	96	2	30672725
Pubmed	Ventral abdominal wall dysmorphogenesis of Msx1/Msx2 double-mutant mice.	MSX1 MSX2	7.54e-06	2	96	2	15803476
Pubmed	Talin, vinculin and DRP (utrophin) concentrations are increased at mdx myotendinous junctions following onset of necrosis.	DMD UTRN	7.54e-06	2	96	2	7962191
Pubmed	Does utrophin expression in muscles of mdx mice during postnatal development functionally compensate for dystrophin deficiency?	DMD UTRN	7.54e-06	2	96	2	8021701
Pubmed	Correlation of Utrophin Levels with the Dystrophin Protein Complex and Muscle Fibre Regeneration in Duchenne and Becker Muscular Dystrophy Muscle Biopsies.	DMD UTRN	7.54e-06	2	96	2	26974331
Pubmed	Acf7 (MACF) is an actin and microtubule linker protein whose expression predominates in neural, muscle, and lung development.	DST MACF1	7.54e-06	2	96	2	11002341
Pubmed	Androgen receptor agonists increase lean mass, improve cardiopulmonary functions and extend survival in preclinical models of Duchenne muscular dystrophy.	DMD UTRN	7.54e-06	2	96	2	28453658
Pubmed	A quantitative study of bioenergetics in skeletal muscle lacking utrophin and dystrophin.	DMD UTRN	7.54e-06	2	96	2	11801396
Pubmed	Apo-dystrophin-1 and apo-dystrophin-2, products of the Duchenne muscular dystrophy locus: expression during mouse embryogenesis and in cultured cell lines.	DMD UTRN	7.54e-06	2	96	2	7987307
Pubmed	Comparative analysis of the human dystrophin and utrophin gene structures.	DMD UTRN	7.54e-06	2	96	2	11861579
Pubmed	Distinct mechanical properties in homologous spectrin-like repeats of utrophin.	DMD UTRN	7.54e-06	2	96	2	30914715
Pubmed	Comparison of skeletal muscle pathology and motor function of dystrophin and utrophin deficient mouse strains.	DMD UTRN	7.54e-06	2	96	2	22284942
Pubmed	Ectoderm-mesenchyme and mesenchyme-mesenchyme interactions regulate Msx-1 expression and cellular differentiation in the murine limb bud.	MSX1 MSX2	7.54e-06	2	96	2	7537232
Pubmed	Haploinsufficiency of utrophin gene worsens skeletal muscle inflammation and fibrosis in mdx mice.	DMD UTRN	7.54e-06	2	96	2	17889902
Pubmed	Matricellular Protein CCN5 Gene Transfer Ameliorates Cardiac and Skeletal Dysfunction in mdx/utrn (±) Haploinsufficient Mice by Reducing Fibrosis and Upregulating Utrophin Expression.	DMD UTRN	7.54e-06	2	96	2	35557546
Pubmed	Comparison of MSX-1 and MSX-2 suggests a molecular basis for functional redundancy.	MSX1 MSX2	7.54e-06	2	96	2	8861098
Pubmed	Regulated expression of homeobox genes Msx-1 and Msx-2 in mouse mammary gland development suggests a role in hormone action and epithelial-stromal interactions.	MSX1 MSX2	7.54e-06	2	96	2	8660900
Pubmed	Characterization of the Ang/Tie2 Signaling Pathway in the Diaphragm Muscle of DMD Mice.	DMD UTRN	7.54e-06	2	96	2	37626761
Pubmed	Molecular heterogeneity of the dystrophin-associated protein complex in the mouse kidney nephron: differential alterations in the absence of utrophin and dystrophin.	DMD UTRN	7.54e-06	2	96	2	15565469
Pubmed	The N- and C-Terminal Domains Differentially Contribute to the Structure and Function of Dystrophin and Utrophin Tandem Calponin-Homology Domains.	DMD UTRN	7.54e-06	2	96	2	26516677
Pubmed	Assessment of cardiac function in three mouse dystrophinopathies by magnetic resonance imaging.	DMD UTRN	7.54e-06	2	96	2	22209498
Pubmed	A Protocol for Simultaneous In Vivo Imaging of Cardiac and Neuroinflammation in Dystrophin-Deficient MDX Mice Using [18F]FEPPA PET.	DMD UTRN	7.54e-06	2	96	2	37108685
Pubmed	Prevention of the dystrophic phenotype in dystrophin/utrophin-deficient muscle following adenovirus-mediated transfer of a utrophin minigene.	DMD UTRN	7.54e-06	2	96	2	10694796
Pubmed	Epithelial-mesenchymal interactions are required for msx 1 and msx 2 gene expression in the developing murine molar tooth.	MSX1 MSX2	7.54e-06	2	96	2	8101167
Pubmed	Enhanced currents through L-type calcium channels in cardiomyocytes disturb the electrophysiology of the dystrophic heart.	DMD UTRN	7.54e-06	2	96	2	24337461
Pubmed	Activation of calcineurin and stress activated protein kinase/p38-mitogen activated protein kinase in hearts of utrophin-dystrophin knockout mice.	DMD UTRN	7.54e-06	2	96	2	11297940
Pubmed	Rescue of severely affected dystrophin/utrophin-deficient mice through scAAV-U7snRNA-mediated exon skipping.	DMD UTRN	7.54e-06	2	96	2	22388933
Pubmed	Msx homeobox gene family and craniofacial development.	MSX1 MSX2	7.54e-06	2	96	2	14728799
Pubmed	Functional correction in mouse models of muscular dystrophy using exon-skipping tricyclo-DNA oligomers.	DMD UTRN	7.54e-06	2	96	2	25642938
Pubmed	Satellite cells and utrophin are not directly correlated with the degree of skeletal muscle damage in mdx mice.	DMD UTRN	7.54e-06	2	96	2	15703201
Pubmed	Utrophin suppresses low frequency oscillations and coupled gating of mechanosensitive ion channels in dystrophic skeletal muscle.	DMD UTRN	7.54e-06	2	96	2	25941878
Pubmed	Duchenne muscular dystrophy and the neuromuscular junction: the utrophin link.	DMD UTRN	7.54e-06	2	96	2	9297964
Pubmed	SERCA1 overexpression minimizes skeletal muscle damage in dystrophic mouse models.	DMD UTRN	7.54e-06	2	96	2	25652448
Pubmed	Utrophin Compensates dystrophin Loss during Mouse Spermatogenesis.	DMD UTRN	7.54e-06	2	96	2	28785010
Pubmed	Restoration of all dystrophin protein interactions by functional domains in trans does not rescue dystrophy.	DMD UTRN	7.54e-06	2	96	2	16307000
Pubmed	Expression of the dystrophin isoform Dp116 preserves functional muscle mass and extends lifespan without preventing dystrophy in severely dystrophic mice.	DMD UTRN	7.54e-06	2	96	2	21949353
Pubmed	Dystrophin and utrophin "double knockout" dystrophic mice exhibit a spectrum of degenerative musculoskeletal abnormalities.	DMD UTRN	7.54e-06	2	96	2	23097179
Pubmed	The role of utrophin and Dp71 for assembly of different dystrophin-associated protein complexes (DPCs) in the choroid plexus and microvasculature of the brain.	DMD UTRN	7.54e-06	2	96	2	15501597
Pubmed	Enhanced expression of the alpha 7 beta 1 integrin reduces muscular dystrophy and restores viability in dystrophic mice.	DMD UTRN	7.54e-06	2	96	2	11257121
Pubmed	Msh homeobox 1 (Msx1)- and Msx2-overexpressing bone marrow-derived mesenchymal stem cells resemble blastema cells and enhance regeneration in mice.	MSX1 MSX2	7.54e-06	2	96	2	28461333
Pubmed	Systemic human minidystrophin gene transfer improves functions and life span of dystrophin and dystrophin/utrophin-deficient mice.	DMD UTRN	7.54e-06	2	96	2	18973234
Pubmed	Renin-angiotensin-aldosterone system inhibitors improve membrane stability and change gene-expression profiles in dystrophic skeletal muscles.	DMD UTRN	7.54e-06	2	96	2	27881412
Pubmed	[Induction phenomena during vertebrate limb development and homeo box gene expression].	MSX1 MSX2	7.54e-06	2	96	2	8099267
Pubmed	Cytoskeletal interactions at the nuclear envelope mediated by nesprins.	SYNE3 SYNE1	7.54e-06	2	96	2	22518138
Pubmed	Dystrophins, utrophins, and associated scaffolding complexes: role in mammalian brain and implications for therapeutic strategies.	DMD UTRN	7.54e-06	2	96	2	20625423
Pubmed	Utrophin influences mitochondrial pathology and oxidative stress in dystrophic muscle.	DMD UTRN	7.54e-06	2	96	2	29065908
Pubmed	Stabilization of the cardiac sarcolemma by sarcospan rescues DMD-associated cardiomyopathy.	DMD UTRN	7.54e-06	2	96	2	31039133
Pubmed	Developmentally regulated expression and localization of dystrophin and utrophin in the human fetal brain.	DMD UTRN	7.54e-06	2	96	2	11796130
Pubmed	Dystrophin and dystrophin-related protein in the brains of normal and mdx mice.	DMD UTRN	7.54e-06	2	96	2	8159184
Pubmed	Dystrophin and utrophin: genetic analyses of their role in skeletal muscle.	DMD UTRN	7.54e-06	2	96	2	10679963
Pubmed	TAT-μUtrophin mitigates the pathophysiology of dystrophin and utrophin double-knockout mice.	DMD UTRN	7.54e-06	2	96	2	21565990
Pubmed	Fly DPP10 acts as a channel ancillary subunit and possesses peptidase activity.	DPP4 DPP10	7.54e-06	2	96	2	27198182
Pubmed	Generation and characterization of transgenic mice with the full-length human DMD gene.	DMD UTRN	7.54e-06	2	96	2	18083704
Pubmed	Generation of an Msx2-GFP conditional null allele.	MSX1 MSX2	7.54e-06	2	96	2	18442049
Pubmed	Dystrophin and dystrophin-related protein (utrophin) distribution in normal and dystrophin-deficient skeletal muscles.	DMD UTRN	7.54e-06	2	96	2	8186702
Pubmed	Contemporary cardiac issues in Duchenne muscular dystrophy. Working Group of the National Heart, Lung, and Blood Institute in collaboration with Parent Project Muscular Dystrophy.	DMD UTRN	7.54e-06	2	96	2	25940966
Interaction	DISC1 interactions	SPTBN4 CCDC13 DST AKAP9 SYNE1 OSBPL8 MACF1 PLCG1 DMD UTRN IKBIP CCDC136 DYNC1H1	1.25e-07	429	96	13	int:DISC1
Interaction	DLX5 interactions	MSX1 MSX2 DLX2 HOXB13	1.05e-05	29	96	4	int:DLX5
Interaction	DRP2 interactions	DRP2 DMD UTRN	1.68e-05	11	96	3	int:DRP2
Interaction	PCNT interactions	SYNE3 DST AKAP9 ODAD1 SYNE1 MACF1 UTRN IKBIP	2.00e-05	241	96	8	int:PCNT
GeneFamily	NKL subclass homeoboxes and pseudogenes	MSX1 MSX2 BARHL1 HMX3 NKX1-1 VAX2 DLX2 HMX1 EMX1 NKX1-2	2.19e-13	67	77	10	519
GeneFamily	Pleckstrin homology domain containing\|Rho guanine nucleotide exchange factors\|C2 domain containing	SPTBN4 OSBPL8 PHLPP1 PLCG1 PLEK ARHGEF2 MCF2L	2.76e-05	206	77	7	682
GeneFamily	Zinc fingers ZZ-type\|Lysine acetyltransferases	DRP2 DMD UTRN	5.79e-05	18	77	3	91
GeneFamily	Spectrin repeat containing nuclear envelope family	SYNE3 SYNE1	1.07e-04	4	77	2	1252
GeneFamily	CD molecules\|DASH family	DPP4 DPP10	3.71e-04	7	77	2	1205
GeneFamily	EF-hand domain containing\|Plakins	DST MACF1	4.93e-04	8	77	2	939
GeneFamily	Myosin heavy chains	MYH6 MYH16	1.81e-03	15	77	2	1098
GeneFamily	Dyneins, axonemal	DNAH2 DNAH5	2.34e-03	17	77	2	536
GeneFamily	Protein phosphatases, Mg2+/Mn2+ dependent	PPM1F PHLPP1	2.34e-03	17	77	2	701
GeneFamily	Transient receptor potential cation channels	TRPM5 TRPM1	6.30e-03	28	77	2	249
Coexpression	GSE2128_C57BL6_VS_NOD_CD4CD8_DP_THYMOCYTE_DN	DPP4 RASGRP1 IFT140 METTL3 PLCG1 IKBIP NARS2	9.10e-06	200	96	7	M6184
CoexpressionAtlas	DevelopingLowerUrinaryTract_e14.5_ Genital tubercle F_emap-6706_k-means-cluster#4_top-relative-expression-ranked_500	MSX1 MSX2 SOSTDC1 DLX2 TRPM1 ABCG5 NKX1-2	4.13e-08	75	94	7	gudmap_developingLowerUrinaryTract_e14.5_ Genital tubercle F_500_k4
CoexpressionAtlas	DevelopingLowerUrinaryTract_e14.5_ Genital tubercle F_emap-6706_k-means-cluster#3_top-relative-expression-ranked_1000	MSX1 MSX2 SOSTDC1 DLX2 TRPM1 ABCG5 NKX1-2	2.65e-07	98	94	7	gudmap_developingLowerUrinaryTract_e14.5_ Genital tubercle F_1000_k3
CoexpressionAtlas	DevelopingLowerUrinaryTract_e14.5_ Genital tubercle_emap-6706_k-means-cluster#5_top-relative-expression-ranked_200	MSX1 MSX2 SOSTDC1 DLX2 ABCG5 NKX1-2	4.29e-07	65	94	6	gudmap_developingLowerUrinaryTract_e14.5_ Genital tubercle_200_k5
CoexpressionAtlas	DevelopingLowerUrinaryTract_e14.5_ Genital tubercle_emap-6706_top-relative-expression-ranked_200	MSX1 MSX2 DST SOSTDC1 DLX2 TRPM1 ABCG5 NKX1-2	4.85e-07	157	94	8	gudmap_developingLowerUrinaryTract_e14.5_ Genital tubercle_200
CoexpressionAtlas	DevelopingLowerUrinaryTract_e14.5_ Genital tubercle F_emap-6706_k-means-cluster#3_top-relative-expression-ranked_200	MSX1 MSX2 DLX2 TRPM1 NKX1-2	5.95e-07	37	94	5	gudmap_developingLowerUrinaryTract_e14.5_ Genital tubercle F_200_k3
CoexpressionAtlas	DevelopingLowerUrinaryTract_e14.5_ Genital tubercle M_emap-6706_k-means-cluster#2_top-relative-expression-ranked_500	MSX1 MSX2 SOSTDC1 DLX2 TRPM1 NKX1-2	7.91e-07	72	94	6	gudmap_developingLowerUrinaryTract_e14.5_ Genital tubercle M_500_k2
CoexpressionAtlas	DevelopingLowerUrinaryTract_e14.5_ Genital tubercle M_emap-6706_k-means-cluster#3_top-relative-expression-ranked_1000	MSX1 MSX2 SOSTDC1 DLX2 TRPM1 ABCG5 NKX1-2	9.39e-07	118	94	7	gudmap_developingLowerUrinaryTract_e14.5_ Genital tubercle M_1000_k3
CoexpressionAtlas	DevelopingLowerUrinaryTract_e14.5_ Genital tubercle M_emap-6706_top-relative-expression-ranked_1000	MSX1 MSX2 DST NALCN HECW2 OSBPL8 SOSTDC1 FNIP1 DLX2 TRPM1 PAX7 CDH2 ABCG5 NKX1-2	1.80e-05	836	94	14	gudmap_developingLowerUrinaryTract_e14.5_ Genital tubercle M_1000
CoexpressionAtlas	Ectoderm Differentiated Cells_vs_Pluripotent Stem Cells-Confounder_removed-fold2.0_adjp0.05	MSX1 MSX2 IFT140 EXD3 AKAP9 BARHL1 PPM1F SNX25 ST8SIA2 TRIM16L DMD ARHGEF2 MCF2L YJEFN3 CDH2 CCDC136 ANO8 DOP1A TECPR1	1.92e-05	1466	94	19	PCBC_ratio_ECTO_vs_SC_cfr-2X-p05
CoexpressionAtlas	DevelopingLowerUrinaryTract_e14.5_ Genital tubercle_emap-6706_top-relative-expression-ranked_100	MSX1 MSX2 DST DLX2 NKX1-2	2.50e-05	78	94	5	gudmap_developingLowerUrinaryTract_e14.5_ Genital tubercle_100
CoexpressionAtlas	DevelopingLowerUrinaryTract_e14.5_ Genital tubercle_emap-6706_k-means-cluster#5_top-relative-expression-ranked_500	MSX1 MSX2 SOSTDC1 DLX2 TRPM1 ABCG5 NKX1-2	5.09e-05	217	94	7	gudmap_developingLowerUrinaryTract_e14.5_ Genital tubercle_500_k5
CoexpressionAtlas	FacebaseRNAseq_e10.5_Neural Epithelium Overlying Lateral Eminence_top-relative-expression-ranked_500	NRXN3 RNF168 AKAP9 CMTM4 PHLPP1 DLX2 TRPM1 DMD CDH2 WWC1	6.57e-05	493	94	10	Facebase_RNAseq_e10.5_Neural Epithelium Overlying Lateral Eminence_500
CoexpressionAtlas	FacebaseRNAseq_e10.5_Neural Epithelium Overlying Lateral Eminence_top-relative-expression-ranked_1000	NRXN3 TRPM5 RNF168 AKAP9 CMTM4 ST8SIA2 PHLPP1 SOSTDC1 DLX2 TRPM1 DMD CDH2 WWC1 DOP1A	1.04e-04	983	94	14	Facebase_RNAseq_e10.5_Neural Epithelium Overlying Lateral Eminence_1000
CoexpressionAtlas	DevelopingLowerUrinaryTract_e14.5_ Genital tubercle F_emap-6706_top-relative-expression-ranked_200	MSX1 MSX2 DST DLX2 TRPM1 NKX1-2	1.06e-04	169	94	6	gudmap_developingLowerUrinaryTract_e14.5_ Genital tubercle F_200
CoexpressionAtlas	kidney_adult_RenalCapsule_k-means-cluster#4_top-relative-expression-ranked_100	DPP4 ABCA9	1.16e-04	4	94	2	gudmap_kidney_adult_RenalCapsule_k4_100
CoexpressionAtlas	DevelopingLowerUrinaryTract_e14.5_ Genital tubercle F_emap-6706_top-relative-expression-ranked_500	MSX1 MSX2 DST HECW2 SOSTDC1 DLX2 TRPM1 ABCG5 NKX1-2	1.18e-04	428	94	9	gudmap_developingLowerUrinaryTract_e14.5_ Genital tubercle F_500
CoexpressionAtlas	DevelopingLowerUrinaryTract_e14.5_ Genital tubercle M_emap-6706_top-relative-expression-ranked_500	MSX1 MSX2 DST HECW2 SOSTDC1 DLX2 TRPM1 CDH2 NKX1-2	1.20e-04	429	94	9	gudmap_developingLowerUrinaryTract_e14.5_ Genital tubercle M_500
CoexpressionAtlas	DevelopingLowerUrinaryTract_e14.5_ Genital tubercle F_emap-6706_k-means-cluster#4_top-relative-expression-ranked_100	MSX2 DLX2 TRPM1	1.22e-04	22	94	3	gudmap_developingLowerUrinaryTract_e14.5_ Genital tubercle F_100_k4
CoexpressionAtlas	DevelopingLowerUrinaryTract_e14.5_ Genital tubercle_emap-6706_k-means-cluster#3_top-relative-expression-ranked_100	MSX1 MSX2 NKX1-2	2.28e-04	27	94	3	gudmap_developingLowerUrinaryTract_e14.5_ Genital tubercle_100_k3
CoexpressionAtlas	Ectoderm Differentiated Cells_vs_Endoderm Differentiated Cells-Confounder_removed-fold2.0_adjp0.05	MSX1 MSX2 IFT140 EXD3 BARHL1 SNX25 ST8SIA2 TRIM16L DMD MCF2L YJEFN3 CCDC136 ANO8 TECPR1	2.64e-04	1075	94	14	PCBC_ratio_ECTO_vs_DE_cfr-2X-p05
CoexpressionAtlas	Ectoderm Differentiated Cells_vs_Mesoderm Day 5-Confounder_removed-fold2.0_adjp0.05	MSX1 MSX2 IFT140 EXD3 BARHL1 ST8SIA2 PHLPP1 TRIM16L DMD MCF2L YJEFN3 CCDC136 TECPR1	3.29e-04	967	94	13	PCBC_ratio_ECTO_vs_MESO-5_cfr-2X-p05
CoexpressionAtlas	DevelopingLowerUrinaryTract_e14.5_ Genital tubercle_emap-6706_top-relative-expression-ranked_500	MSX1 MSX2 DST SOSTDC1 DLX2 TRPM1 ABCG5 NKX1-2	3.39e-04	390	94	8	gudmap_developingLowerUrinaryTract_e14.5_ Genital tubercle_500
CoexpressionAtlas	CD positive, CD4 Control, 4+ 8- B220-, Spleen, avg-4	RASGRP1 MACF1 PLCG1 GALNT6 UTRN TECPR1	3.44e-04	210	94	6	GSM403995_500
CoexpressionAtlas	alpha beta T cells, T.8Nve.PP, TCRb+ CD8+ CD44low CD62Lhigh, Peyer's Patch, avg-1	BARHL1 HMX3 MACF1 MYO18B UTRN TECPR1 NKX1-2	3.54e-04	297	94	7	GSM538414_500
CoexpressionAtlas	DevelopingLowerUrinaryTract_e14.5_ Genital tubercle F_emap-6706_top-relative-expression-ranked_1000	TBC1D16 MSX1 MSX2 DST HECW2 SOSTDC1 DLX2 TRPM1 CDH2 ABCG5 IKBIP NKX1-2	3.67e-04	850	94	12	gudmap_developingLowerUrinaryTract_e14.5_ Genital tubercle F_1000
CoexpressionAtlas	FacebaseRNAseq_e10.5_Mandibular Arch_top-relative-expression-ranked_1000	SPTBN4 MSX1 TRPM5 AKAP9 CMTM4 DNAH2 ST8SIA2 SOSTDC1 MACF1 DLX2 TRPM1 DMD MCF2L	3.67e-04	978	94	13	Facebase_RNAseq_e10.5_Mandibular Arch_1000
CoexpressionAtlas	alpha beta T cells, T.4+8int.Th, 4+ 8int TCRhi, Thymus, avg-3	RASGRP1 OSBPL8 PLCG1 GALNT6 UTRN RGS3 TECPR1	3.91e-04	302	94	7	GSM399362_500
CoexpressionAtlas	FacebaseRNAseq_e10.5_Maxillary Arch_top-relative-expression-ranked_1000	SPTBN4 MSX1 MSX2 RNF168 AKAP9 CMTM4 SYNE1 MACF1 VAX2 DLX2 TRPM1 ARHGEF2 PCSK4	4.08e-04	989	94	13	Facebase_RNAseq_e10.5_Maxillary Arch_1000
CoexpressionAtlas	FacebaseRNAseq_e10.5_Medial Nasal Eminence_top-relative-expression-ranked_2500_k-means-cluster#4	SPTBN4 MSX1 SYNE1 DNAH2 MACF1 TRPM1 PAX7 PCSK4 IKBIP DOP1A TECPR1	4.45e-04	744	94	11	Facebase_RNAseq_e10.5_Medial Nasal Eminence_2500_K4
CoexpressionAtlas	CD positive, CD4 Control, 4+8-B220-, Spleen, avg-2	RASGRP1 MACF1 PLCG1 GALNT6 UTRN TECPR1	4.85e-04	224	94	6	GSM403994_500
CoexpressionAtlas	DevelopingLowerUrinaryTract_e14.5_ Genital tubercle F_emap-6706_top-relative-expression-ranked_100	MSX2 DST DLX2 TRPM1	5.54e-04	85	94	4	DevelopingLowerUrinaryTract_e14.5_ Genital tubercle F_emap-6706_100
CoexpressionAtlas	alpha beta T cells, T.4Nve.PP, TCR+ CD4+ CD44low CD62Lhigh, Peyer's Patch, avg-2	RASGRP1 MACF1 PLCG1 GALNT6 UTRN DOP1A TECPR1	6.27e-04	327	94	7	GSM538380_500
ToppCell	COVID-19-COVID-19_Severe-Lymphocyte-T/NK-gd_T\|COVID-19_Severe / Disease, condition lineage and cell class	RASGRP1 FCGBP SYNE1 MACF1 PLEK CCDC65 UTRN	2.45e-07	200	95	7	f72bc3f6606ae77fe1b0a972e35b3ce0727804d9
ToppCell	TCGA-Brain-Primary_Tumor-Low_Grade_Glioma\|TCGA-Brain / Sample_Type by Project: Shred V9	DST NALCN CMTM4 SYNE1 PHLPP1 DYNC1H1	2.21e-06	177	95	6	e8ab340b20cd41554c3841fe980e078e878af35f
ToppCell	droplet-Pancreas-PANCREAS-30m-Epithelial-pancreatic_B_cell\|Pancreas / Large_Intestine_Pancreas_Liver - method, tissue, subtissue, age, lineage, cell ontology and free annotation	DST AKAP9 FNIP1 MACF1 CDH2 DYNC1H1	3.87e-06	195	95	6	3e519cffa6144a62b06124642a14c9ff39b76554
ToppCell	moderate-Epithelial-Ciliated\|Epithelial / Severity, Lineage and Cell class of Nasopharyngeal (NS) Samples from Patients and Controls	ODAD1 SYNE1 CRACDL DNAH2 CCDC65 DNAH5	3.87e-06	195	95	6	3486eae5fdb062a75a907b896c9d7b396d2aa195
ToppCell	droplet-Pancreas-PANCREAS-30m-Epithelial-pancreatic_B_cell\|Pancreas / Large_Intestine_Pancreas_Liver - method, tissue, subtissue, age, lineage, cell ontology and free annotation	DST AKAP9 FNIP1 MACF1 CDH2 DYNC1H1	3.87e-06	195	95	6	7796ea9247f4c63762f0de8490fed08b9717fa23
ToppCell	COVID-19_Severe-Lymphoid_T/NK-gd_T\|COVID-19_Severe / Disease group, lineage and cell class	RASGRP1 SYNE1 MACF1 PLEK CCDC65 UTRN	3.87e-06	195	95	6	9990440bda7fac5d00ef80444fab07459be625e1
ToppCell	5'-Airway_Nasal-Epithelial-Airway_ciliated\|5' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5	AKAP9 ODAD1 SYNE1 DNAH2 CCDC65 DNAH5	4.11e-06	197	95	6	91637bdeab85024b5a02d1066f76cb803a2d6420
ToppCell	5'-Airway_Nasal-Epithelial-Airway_ciliated-ciliated_columnar_cell_of_tracheobronchial_tree\|5' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5	AKAP9 ODAD1 SYNE1 DNAH2 CCDC65 DNAH5	4.11e-06	197	95	6	22c87dd15dc57bd0aa98a204c9fc9b3b9b573b45
ToppCell	3'-Parenchyma_lung-Epithelial-Airway_ciliated-ciliated_columnar_cell_of_tracheobronchial_tree-Multiciliated_(non-nasal)-Multiciliated_(non-nasal)_L.0.3.2.2\|3' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5	AKAP9 ODAD1 SYNE1 DNAH2 DMD DNAH5	4.11e-06	197	95	6	74a2c6cb8fcfe53dd9a2b36492a16c58f38e51c9
ToppCell	5'-Airway_Nasal-Epithelial-Airway_ciliated-ciliated_columnar_cell_of_tracheobronchial_tree-Multiciliated_(non-nasal)-Multiciliated_(non-nasal)_L.0.3.0.0\|5' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5	AKAP9 ODAD1 SYNE1 DNAH2 CCDC65 DNAH5	4.11e-06	197	95	6	3bbf068d2ad8196fbc85d3f311a7c54c9aece856
ToppCell	5'-Airway_Nasal-Epithelial-Airway_ciliated-ciliated_columnar_cell_of_tracheobronchial_tree-Multiciliated_(non-nasal)\|5' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5	AKAP9 ODAD1 SYNE1 DNAH2 CCDC65 DNAH5	4.11e-06	197	95	6	87db09f341e2b20eb6e1c3e917cb5c960387b3e9
ToppCell	healthy_donor-Lymphocytic-ILC-NK_cell\|healthy_donor / Disease condition, Lineage, Cell class and subclass	SYNE1 MACF1 PLEK ITGAM UTRN RGS3	4.23e-06	198	95	6	d7053a898e04478c577381085f615edaad3cdc5b
ToppCell	critical-Epithelial-Ciliated\|Epithelial / Severity, Lineage and Cell class of Nasopharyngeal (NS) Samples from Patients and Controls	ODAD1 SYNE1 CRACDL DNAH2 CCDC65 DNAH5	4.23e-06	198	95	6	ee2c8385c0bf4ea9f5c9517b52cf131af3fbdd40
ToppCell	healthy_donor-Lymphocytic-ILC\|healthy_donor / Disease condition, Lineage, Cell class and subclass	SYNE1 MACF1 PLEK ITGAM UTRN RGS3	4.23e-06	198	95	6	aa33be29e26f1b8facfc894413099083ae3bbb1b
ToppCell	Control-NK\|Control / Disease condition and Cell class	SYNE1 MACF1 PLEK ITGAM UTRN RGS3	4.35e-06	199	95	6	f3316fb97c6065286ffd22a0ad9fe7aa5b3b5650
ToppCell	5'-GW_trimst-2-SmallIntestine-Neuronal-Glial_immature-Glia_3_(BCAN+)\|GW_trimst-2 / Celltypes from developing, pediatric, Crohn's, & adult GI tract	NRXN3 DST VAX2 DLX2 DMD CDH2	4.35e-06	199	95	6	a816b0eed80530113b7e720bbd2311a544ed8ed1
ToppCell	COVID-19-COVID-19_Mild-Lymphocyte-T/NK-NK_activated\|COVID-19_Mild / Disease, condition lineage and cell class	SYNE1 MACF1 PLCG1 PLEK UTRN RGS3	4.48e-06	200	95	6	2281debd86e5d92e8fe0397aec9ef670800f7471
ToppCell	Brain_organoid-organoid_Tanaka_cellReport-6m-Mesenchymal-Cilia-bearing_cell\|6m / Sample Type, Dataset, Time_group, and Cell type.	MSX1 CCDC13 ODAD1 SOSTDC1 CCDC65 DNAH5	4.48e-06	200	95	6	177f9ad8dd8635394c575a2b30140184df0bd51e
ToppCell	PND07-28-samps-Mesenchymal-Matrix_fibroblast-mesenchymal_C\|PND07-28-samps / Age Group, Lineage, Cell class and subclass	SPTBN4 CMTM4 TRPM1 DMD ABCG5	6.18e-06	121	95	5	176de42c088988fe1a7838f96add26ee8a30e543
ToppCell	TCGA-Lung-Primary_Tumor-Lung_Carcinoma-Lung_Nonmucinous_Lepidic_Adenocarcinoma-7\|TCGA-Lung / Sample_Type by Project: Shred V9	C9orf152 CCDC13 IFT140 SNX25 DNAH2	8.77e-06	130	95	5	17a4ee699adfa265335b1abfe6cb0f3f7c93362b
ToppCell	3'_v3-blood-Lymphocytic_T_CD4-T_CD4/CD8\|blood / Manually curated celltypes from each tissue	AKAP9 SYNE1 MACF1 PLCG1 UTRN	1.05e-05	135	95	5	ae2d3a42e567b5bade304c0caa497eb725be3565
ToppCell	E16.5-Immune-Immune_Myeloid-Monocytic-Macrophage-AM\|E16.5 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif	SYNE3 GALNT6 PLEK ITGAM MARCO	2.32e-05	159	95	5	0c2437da5443fc3aff66f8ef311f02aa434a1fb0
ToppCell	facs-Trachea-3m-Mesenchymal-myofibroblast-tracheobronchial_smooth_muscle_cell-smooth_muscle_cell_of_trachea_l32-30\|3m / method, tissue, age, lineage, sublineage, cell ontologies, cell type and subtype	CCDC13 DRP2 SOSTDC1 CDH2 HOXB13	2.69e-05	164	95	5	3caf4cdaa0164907893fea61e251fd8b5fa926e4
ToppCell	renal_cortex_nuclei-CKD+DKD_normotensive-Endothelial-blood_vessel_endothelial_cell_of_kidney-arteriolar_vasa-recta_endothelial\|CKD+DKD_normotensive / Celltypes from Cells and Nuclei per compartment and clinical group	MORC1 SYNE3 SH2D3C UTRN RGS3	2.77e-05	165	95	5	a74751e0ec857aa974bec04ccc747c004a8f6e01
ToppCell	3'-GW_trimst-2-LargeIntestine-Neuronal-Glial_immature-Glia_3_(BCAN+)\|GW_trimst-2 / Celltypes from developing, pediatric, Crohn's, & adult GI tract	NRXN3 DST PHLPP1 DMD CDH2	3.11e-05	169	95	5	2456b3e7776e8a2214972be1b4d66a3ca5480ae0
ToppCell	E18.5-Immune-Immune_Myeloid-Granulocytic-Basophil\|E18.5 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif	SPTBN4 SYNE3 SYNE1 GALNT6 ITGAM	3.11e-05	169	95	5	b23d0aaa2da333b9c69a7aee862d5a5d2a1bf79b
ToppCell	E18.5-Immune-Immune_Myeloid-Granulocytic-Basophil-Basophil_mature\|E18.5 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif	SPTBN4 SYNE3 SYNE1 GALNT6 ITGAM	3.11e-05	169	95	5	83d1bcf33872b01ea9614f608a3e4ab30df25c7e
ToppCell	3'-Broncho-tracheal-Epithelial-Airway_ciliated-ciliated_columnar_cell_of_tracheobronchial_tree-Multiciliated_(non-nasal)-Multiciliated_(non-nasal)_L.0.3.0.2\|3' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5	CCDC13 ODAD1 DNAH2 DNAH5 PCSK4	3.11e-05	169	95	5	14aadc2d1bf66eb47dac33b4d61ddb3c942caa4f
ToppCell	COVID-19-Heart-CM_+_Macrophage\|Heart / Disease (COVID-19 only), tissue and cell type	FCGBP MYO18B ITGAM CDH2 MARCO	3.20e-05	170	95	5	4232fe937909f93d3736988c707b8f95ce993398
ToppCell	droplet-Pancreas-Exocrine-21m-Epithelial-pancreatic_ductal_cel\|Pancreas / Large_Intestine_Pancreas_Liver - method, tissue, subtissue, age, lineage, cell ontology and free annotation	FCGBP DRP2 ODAD1 ST8SIA2 ITIH2	3.38e-05	172	95	5	c0bda7153e02bee7d0326138cc684151c404c2a1
ToppCell	BALF-PFMC-Severe-critical_progression_d12-22_with-steroid-Lymphocytic-Lymphocytic_T-CD8-positive,_alpha-beta_T_cell-T_CD8_c08-IL2RB\|Severe-critical_progression_d12-22_with-steroid / Compartment, severity and other cell annotations on 10x 3' data (130k)	FCGBP SYNE1 PLEK PCSK4 ITIH2	3.38e-05	172	95	5	e3a8891694343b6b01e80a200ae338d24797e417
ToppCell	E16.5-Immune-Immune_Myeloid-Monocytic-Macrophage-AM-AM_mature\|E16.5 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif	SYNE3 GALNT6 PLEK ITGAM MARCO	3.47e-05	173	95	5	20f7dfe7d92a3dbec9da9a1f3185aa10cb8f0a3c
ToppCell	droplet-Lung-21m-Epithelial-airway_epithelial\|21m / method, tissue, age, lineage, sublineage, cell ontologies, cell type and subtype	FCGBP BARHL1 CCDC65 DNAH5 ITIH2	3.47e-05	173	95	5	a809be2630d2b91b53b82b5e2bb99e05524597c1
ToppCell	droplet-Heart-nan-3m\|Heart / Tongue_Heart_Limb_Muscle_Aorta_Diaphragm - method, tissue, subtissue, age, lineage, cell ontology and free annotation	MYH6 MACF1 ZNF561 DMD ABCA9	3.77e-05	176	95	5	749b47eac5436fa34e0d243ffbc6f1897f4e431e
ToppCell	TCGA-Colorectal-Primary_Tumor-Colorectal_Adenocarcinoma-Mucinous_Colon_Adenocarcinoma-10\|TCGA-Colorectal / Sample_Type by Project: Shred V9	NALCN HECW2 SYNE1 ITGAM CDH2	4.09e-05	179	95	5	cc079ba015326dccde955c5eafa3e4a2e40de192
ToppCell	renal_cortex_nuclei-Hypertensive_with+without-CKD-Endothelial-lymphatic_endothelial_cell-lymphatic_endothelial_cell_of_renal_cortex\|Hypertensive_with+without-CKD / Celltypes from Cells and Nuclei per compartment and clinical group	SYNE3 HECW2 SH2D3C UTRN CCDC136	4.42e-05	182	95	5	41b070085edba7a58b81c20aa4942d06f745acf8
ToppCell	renal_cortex_nuclei-Hypertensive_with+without-CKD-Endothelial-lymphatic_endothelial_cell-lymphatic_endothelial_cell_of_renal_cortex-lymphatic_endothelial_cell_of_renal_cortex\|Hypertensive_with+without-CKD / Celltypes from Cells and Nuclei per compartment and clinical group	SYNE3 HECW2 SH2D3C UTRN CCDC136	4.42e-05	182	95	5	5e9a67b2de0daa4fdc344b10a857d8a901ad810e
ToppCell	renal_cortex_nuclei-Hypertensive_with+without-CKD-Endothelial-lymphatic_endothelial_cell\|Hypertensive_with+without-CKD / Celltypes from Cells and Nuclei per compartment and clinical group	SYNE3 HECW2 SH2D3C UTRN CCDC136	4.42e-05	182	95	5	b0fe042c71d6ab8c75abd7ba9d2de00b72d01c0c
ToppCell	COVID-19_Mild-gd_T\|COVID-19_Mild / Disease condition and Cell class	SYNE1 MACF1 PLEK ITGAM UTRN	4.54e-05	183	95	5	f593a89b0aa8fffdfa403769916facfd30358521
ToppCell	Mild/Remission-B_intermediate-10\|Mild/Remission / disease group and sub_cluster of B and Plasma cells(res = 0.5)	SPTBN4 RASGRP1 MACF1 EEA1 PLEK	4.54e-05	183	95	5	278064c9f0582463b83bf156d34e77f60187613b
ToppCell	TCGA-Pancreas-Primary_Tumor-Pancreatic_Adenocarcinoma-Ductal_Adenocarcinoma-4\|TCGA-Pancreas / Sample_Type by Project: Shred V9	NALCN OSBPL8 EEA1 UTRN ABCA9	4.66e-05	184	95	5	67164bb6bcae7322cb89b585c7aa10bce35b0ecd
ToppCell	3'-GW_trimst-2-LargeIntestine-Neuronal-Glial_immature\|GW_trimst-2 / Celltypes from developing, pediatric, Crohn's, & adult GI tract	NRXN3 DST DLX2 DMD CDH2	4.66e-05	184	95	5	226ccac00ac1c3a0ad7283785fd14312320e0ca6
ToppCell	COVID-19-Heart-CM_1\|COVID-19 / Disease (COVID-19 only), tissue and cell type	MYH6 NALCN DMD MYO18B CDH2	4.66e-05	184	95	5	e737f0f14c49b07bbb04a165083ac32210bc5690
ToppCell	TCGA-Breast-Metastatic-Breast_Carcinoma-Infiltrating_Ductal_Carcinoma-1\|TCGA-Breast / Sample_Type by Project: Shred V9	CCDC13 HMX3 PDILT EMX1	4.72e-05	93	95	4	504e11d516073492d6ef8cd3bd3b8a652351f2b2
ToppCell	NS-critical-d_16-33-Epithelial-Ciliated\|d_16-33 / Location, Severity, dps_group, Lineage and Cell class of Upper airway (combined)	ODAD1 CRACDL DNAH2 CCDC65 DNAH5	4.91e-05	186	95	5	76033438426d8f9c72cd6691a7baf92104c9f03d
ToppCell	facs-Trachea-18m-Mesenchymal-fibroblast-fibroblast_of_trachea-\|18m / method, tissue, age, lineage, sublineage, cell ontologies, cell type and subtype	CCDC13 DRP2 BARHL1 HECW2 HMX3	4.91e-05	186	95	5	bdc87e4631a8ea73e262e541aa84a28f24c94b00
ToppCell	LA-03._Atrial_Cardiomyocyte\|World / Chamber and Cluster_Paper	MYH6 DMD MYO18B CDH2 RGS3	5.16e-05	188	95	5	6d249fe92d51a19da19ec14bb2262d394255d577
ToppCell	3'-GW_trimst-2-LargeIntestine-Neuronal\|GW_trimst-2 / Celltypes from developing, pediatric, Crohn's, & adult GI tract	NRXN3 DST DLX2 DMD CDH2	5.16e-05	188	95	5	ccd2541892112a7a303f766adf9a7afeb754498c
ToppCell	Fetal_29-31_weeks-Endothelial-endothelial_cell_of_lymph_vessel-D062\|Fetal_29-31_weeks / Lineage, Cell type, age group and donor	NALCN PPM1F HECW2 SH2D3C MCF2L	5.29e-05	189	95	5	0d18ea72bd58d32a8ab9a61cf97f5786642f804b
ToppCell	nucseq-Endothelial-Endothelial_Vascular-Endothelial_capillary-CAP2\|nucseq / Celltype signatures by Technology, Lineage, Lineage_subclass, Celltype_group, Cell_type2	IFT140 HECW2 SYNE1 SH2D3C SOSTDC1	5.29e-05	189	95	5	b6b4da51bc7f2c13a2f940540fdc61027d084835
ToppCell	Fetal_29-31_weeks-Endothelial-endothelial_cell_of_lymph_vessel\|Fetal_29-31_weeks / Lineage, Cell type, age group and donor	NRXN3 NALCN PPM1F HECW2 SH2D3C	5.29e-05	189	95	5	55a1776a4ce049959b3f13a43744c7314bc1f00a
ToppCell	RV-06._Ventricular_Cardiomyocyte_II\|RV / Chamber and Cluster_Paper	MYH6 DST DMD MYO18B CDH2	5.43e-05	190	95	5	fe8e78922c8ae928ef9a80bffd67868d5a87a091
ToppCell	LV-06._Ventricular_Cardiomyocyte_II\|LV / Chamber and Cluster_Paper	MYH6 DST DMD MYO18B CDH2	5.56e-05	191	95	5	25f3eb34f4e70761e81e84c8a5829f216108cbc6
ToppCell	LA-03._Atrial_Cardiomyocyte\|LA / Chamber and Cluster_Paper	MYH6 DMD MYO18B CDH2 RGS3	5.56e-05	191	95	5	5d1b674eb7703830b7ce8bbeac3363cabd0e6ae9
ToppCell	RA-09._Endothelium_I\|RA / Chamber and Cluster_Paper	SYNE1 CRACDL SH2D3C MCF2L UTRN	5.70e-05	192	95	5	8a1b1c3e83a68ad74f8f4eb00455c9e41aa57cfc
ToppCell	NS-moderate-d_0-4\|moderate / Location, Severity, dps_group, Lineage and Cell class of Upper airway (combined)	ODAD1 CRACDL DNAH2 PAX7 DNAH5	5.84e-05	193	95	5	ea345d34440b25f65358a53dc72831998d1c3620
ToppCell	severe-low-quality_cells\|severe / Cohort 1 (10x PBMC) with disease condition, cell group and cell class	AKAP9 SYNE1 MACF1 PLCG1 UTRN	5.84e-05	193	95	5	9337bc93e3904c7fc7c93c328518bcd6453b1e8c
ToppCell	COPD-Lymphoid-NK\|Lymphoid / Disease state, Lineage and Cell class	SYNE1 PLEK ITGAM UTRN RGS3	5.84e-05	193	95	5	0020249fa71afb500af73700543bb6f349be6b10
ToppCell	RV-09._Endothelium_I\|RV / Chamber and Cluster_Paper	SYNE1 CRACDL SH2D3C MCF2L UTRN	5.99e-05	194	95	5	7b408096e717f2327c12aea35a8d5fc4621d3b06
ToppCell	367C-Lymphocytic-CD8+_Cytotoxic_T-cell\|Lymphocytic / Donor, Lineage, Cell class and subclass (all cells)	SYNE1 PLEK ITGAM CCDC65 RGS3	5.99e-05	194	95	5	a8dc3336aa4ef497f6d26cede02ddac425e7c655
ToppCell	RA-03._Atrial_Cardiomyocyte\|World / Chamber and Cluster_Paper	MYH6 DMD MYO18B CDH2 RGS3	5.99e-05	194	95	5	89812fb164065041357bb37a3c2d87028ec3de4e
ToppCell	RA-03._Atrial_Cardiomyocyte\|RA / Chamber and Cluster_Paper	MYH6 DMD MYO18B CDH2 RGS3	5.99e-05	194	95	5	c3535f7cc0076653c72db582047cff053c322397
ToppCell	COVID-19-Heart-CM_2\|Heart / Disease (COVID-19 only), tissue and cell type	MYH6 DST DMD MYO18B CDH2	6.14e-05	195	95	5	75fc81bddb246dca3b437fb60827b1d4fe416405
ToppCell	LV-09._Endothelium_I\|World / Chamber and Cluster_Paper	SYNE1 CRACDL SH2D3C MCF2L UTRN	6.14e-05	195	95	5	19e0a6c3eae1615aaa39767300acd937dfcb2a7f
ToppCell	COVID-19-Heart-EC_1\|Heart / Disease (COVID-19 only), tissue and cell type	HECW2 SYNE1 SH2D3C MCF2L UTRN	6.14e-05	195	95	5	50a193475db1bb1e05b8590225a553688c372c14
ToppCell	facs-Lung-nan-3m-Endothelial\|Lung / Lung_Trachea - method, tissue, subtissue, age, lineage, cell ontology and free annotation	PPM1F HECW2 SH2D3C PLCG1 UTRN	6.14e-05	195	95	5	7f9b7f15006610ad591063d90e90367bd6083c7f
ToppCell	facs-Heart-RA-18m-Endothelial\|Heart / Tongue_Heart_Limb_Muscle_Aorta_Diaphragm - method, tissue, subtissue, age, lineage, cell ontology and free annotation	PPM1F SH2D3C MCF2L UTRN RGS3	6.14e-05	195	95	5	30c75761079fa1e1a3b84d23c88a222f459d5ce5
ToppCell	critical-Epithelial-Ciliated\|critical / Severity, Lineage and Cell class of Nasopharyngeal (NS) Samples from Patients and Controls	ODAD1 CRACDL DNAH2 CCDC65 DNAH5	6.29e-05	196	95	5	27b855c6e1ae44f16db998cf0e81bd686b9cee7e
ToppCell	PBMC-Severe-Lymphocyte-T/NK-Other_T-gd_T\|Severe / Location, Disease Group, Cell group, Cell class (2021.03.09)	RASGRP1 SYNE1 MACF1 CCDC65 UTRN	6.29e-05	196	95	5	418e8e0a51c5cb60e3b903e7d2d800dc8b9f3d5c
ToppCell	PBMC-Severe-Lymphocyte-T/NK-Other_T-gd_T-\|Severe / Location, Disease Group, Cell group, Cell class and sub_cluster (2021.03.09)	RASGRP1 SYNE1 MACF1 CCDC65 UTRN	6.29e-05	196	95	5	6beaf0c2799424c59819b286fbb5c1a83d85e4d1
ToppCell	NS-control-d_0-4-Epithelial-Ciliated\|d_0-4 / Location, Severity, dps_group, Lineage and Cell class of Upper airway (combined)	ODAD1 SYNE1 DNAH2 CCDC65 DNAH5	6.29e-05	196	95	5	d46ab80554dd3c1cc81e1938ea2acfd5e85c6d2a
ToppCell	3'-GW_trimst-2-SmallIntestine-Neuronal-Glial_immature-Glia_3_(BCAN+)\|GW_trimst-2 / Celltypes from developing, pediatric, Crohn's, & adult GI tract	NRXN3 DST DLX2 DMD CDH2	6.44e-05	197	95	5	bb35a2b7320fda92e9cd42f536b7bd54e3a73a32
ToppCell	3'-GW_trimst-1.5-SmallIntestine-Neuronal-Glial_immature-Glia_3_(BCAN+)\|GW_trimst-1.5 / Celltypes from developing, pediatric, Crohn's, & adult GI tract	NRXN3 DST DLX2 DMD CDH2	6.44e-05	197	95	5	1018aac22659c081d227d566afa29b1748c18ade
ToppCell	COVID_vent-Lymphocytic-T_cell\|COVID_vent / Disease condition, Lineage, Cell class and subclass	DPP4 RASGRP1 SYNE1 MACF1 PLCG1	6.44e-05	197	95	5	ad702e440a74d54cfdcb8bb1c66bd8e0e71ab04e
ToppCell	T_cells-CTLs\|World / Immune cells in Kidney/Urine in Lupus Nephritis	RASGRP1 SYNE1 MACF1 PLEK CCDC65	6.44e-05	197	95	5	2de34e20915a247bee75aa40495e23c20bb23e18
ToppCell	COVID_vent-Lymphocytic-T_cell-CD8+_Memory_T_cell\|COVID_vent / Disease condition, Lineage, Cell class and subclass	RASGRP1 SYNE1 MACF1 PLEK UTRN	6.44e-05	197	95	5	d4dfb3b561d0783cdbee4e8d27009ad81df695cb
ToppCell	Control-Control-Lymphocyte-T/NK-NK_activated\|Control / Disease, condition lineage and cell class	SYNE1 MACF1 PLCG1 PLEK UTRN	6.60e-05	198	95	5	76d5fe4e5bbe6c73a6ca409b80b5c3924e07cab7
ToppCell	renal_cortex_nuclei-Hypertensive_with+without-CKD-Endothelial-blood_vessel_endothelial_cell_of_kidney-capillary-immature_endothelial_cell\|Hypertensive_with+without-CKD / Celltypes from Cells and Nuclei per compartment and clinical group	PPM1F HECW2 SYNE1 SH2D3C UTRN	6.60e-05	198	95	5	31ba87552be97c9b78c9e82f98e96699ccb19824
ToppCell	renal_cortex_nuclei-Adult_normal_reference-Endothelial-blood_vessel_endothelial_cell_of_kidney\|Adult_normal_reference / Celltypes from Cells and Nuclei per compartment and clinical group	PPM1F HECW2 SYNE1 SH2D3C UTRN	6.60e-05	198	95	5	451003a21162eeae90739fdb502bb50b362d80c8
ToppCell	PBMC-Severe-Lymphocyte-T/NK-NK_cell-NK_activated\|Severe / Location, Disease Group, Cell group, Cell class and sub_cluster (2021.03.01)	SYNE1 MACF1 PLEK UTRN RGS3	6.60e-05	198	95	5	0e918e9db9b884f5328d438e90efe065e27266ee
ToppCell	5'-GW_trimst-2-SmallIntestine-Neuronal-Glial_immature\|GW_trimst-2 / Celltypes from developing, pediatric, Crohn's, & adult GI tract	NRXN3 DST DLX2 DMD CDH2	6.60e-05	198	95	5	50dfe6efca76ea9683a19b6bff59cb5030d346f1
ToppCell	3'-GW_trimst-1.5-SmallIntestine-Neuronal-Glial_immature\|GW_trimst-1.5 / Celltypes from developing, pediatric, Crohn's, & adult GI tract	NRXN3 DST DLX2 DMD CDH2	6.60e-05	198	95	5	5b9a7b9f53a3d9cf8d6e6a7c1c94514b22cf9fa8
ToppCell	PBMC-Severe-Lymphocyte-T/NK-NK_cell-NK_activated-\|Severe / Location, Disease Group, Cell group, Cell class and sub_cluster (2021.03.01)	SYNE1 MACF1 PLEK UTRN RGS3	6.60e-05	198	95	5	ce92d5fbc2eac27fb246b044fb1914ab92506275
ToppCell	PBMC-Severe-Lymphocyte-T/NK-NK_cell-NK_activated\|Severe / Location, Disease Group, Cell group, Cell class (2021.03.09)	SYNE1 MACF1 PLEK UTRN RGS3	6.60e-05	198	95	5	fed823d6e684d113bcc9ff3cd1803bb001aa02fa
ToppCell	renal_cortex_nuclei-Adult_normal_reference-Endothelial\|Adult_normal_reference / Celltypes from Cells and Nuclei per compartment and clinical group	PPM1F HECW2 SYNE1 SH2D3C UTRN	6.60e-05	198	95	5	440af8f90c7afa1c07000806bcf9110b70f489fb
ToppCell	PBMC-Severe-Lymphocyte-T/NK-NK_cell-NK_activated-\|Severe / Location, Disease Group, Cell group, Cell class and sub_cluster (2021.03.09)	SYNE1 MACF1 PLEK UTRN RGS3	6.60e-05	198	95	5	1ef3a6bd681c223eed58300348adfef89df5563c
ToppCell	metastatic_Brain-Endothelial_cells-Tumor_ECs\|metastatic_Brain / Location, Cell class and cell subclass	MSX1 BARHL1 HECW2 SH2D3C MCF2L	6.60e-05	198	95	5	5e274f29cc796dae7d64d6035e904816c25f9914
ToppCell	COVID-19_Moderate-NK\|COVID-19_Moderate / disease group, cell group and cell class	SYNE1 PLEK ITGAM UTRN RGS3	6.75e-05	199	95	5	e0e83ba511957be9ad3413460dcb6b7d7b65dd18
ToppCell	PBMC-Control-Lymphocyte-T/NK-NK_cell-NK\|Control / Location, Disease Group, Cell group, Cell class and sub_cluster (2021.03.01)	SYNE1 MACF1 PLEK UTRN RGS3	6.75e-05	199	95	5	4820f5bcd7bc34c2ebf6a3422cc8eb383a3b5a4e
ToppCell	(07)_Ionocytes\|World / shred by cell type by condition	DPP4 C9orf152 SOSTDC1 DLX2 MCF2L	6.75e-05	199	95	5	8194777d367405a7840787e977854b5c07e3bd6b
ToppCell	5'-GW_trimst-2-LargeIntestine-Neuronal-Glial_immature-Glia_3_(BCAN+)\|GW_trimst-2 / Celltypes from developing, pediatric, Crohn's, & adult GI tract	NRXN3 DST DLX2 DMD CDH2	6.75e-05	199	95	5	a76aa30fb264bdcbc0cb09113f814fc5a89e7319
ToppCell	5'-GW_trimst-2-LargeIntestine-Neuronal\|GW_trimst-2 / Celltypes from developing, pediatric, Crohn's, & adult GI tract	NRXN3 DST DLX2 DMD CDH2	6.75e-05	199	95	5	5f350d9c7da9ac111bf22623dd4fed7f7983c9fc
ToppCell	mild-MAIT\|World / Cohort 1 (10x PBMC) with disease condition, cell group and cell class	DPP4 RASGRP1 SYNE1 MACF1 UTRN	6.75e-05	199	95	5	cbe1fb6d2c5fca7a1baf1ad20afcdf8e8e11bd84
ToppCell	PBMC-Control-Lymphocyte-T/NK-NK_cell\|Control / Location, Disease Group, Cell group, Cell class and sub_cluster (2021.03.01)	SYNE1 MACF1 PLEK UTRN RGS3	6.75e-05	199	95	5	eb05ccae5187e4701bbbe6d714a6d2808fbcf306
ToppCell	PBMC-Control-Lymphocyte-T/NK-NK_cell\|Control / Location, Disease Group, Cell group, Cell class (2021.03.09)	SYNE1 MACF1 PLEK UTRN RGS3	6.75e-05	199	95	5	10c8729b779073c3bf808e85958d59147f0be5c5
ToppCell	(03)_KRT6B+-(2)_GFP_FOXI1\|(03)_KRT6B+ / shred by cell type by condition	DST AKAP9 OSBPL8 EEA1 UTRN	6.75e-05	199	95	5	c425e7975f492ed5cfcca022248adb627e1d27d4
ToppCell	PBMC-Control-Lymphocyte-T/NK-NK_cell-NK-\|Control / Location, Disease Group, Cell group, Cell class and sub_cluster (2021.03.01)	SYNE1 MACF1 PLEK UTRN RGS3	6.75e-05	199	95	5	867fd292f3879982422e840e087bfdb3b21a8715
ToppCell	Control-Lymphoid_T/NK-NK\|Control / Disease group, lineage and cell class	SYNE1 MACF1 PLEK UTRN RGS3	6.75e-05	199	95	5	94b2693a8378b9b2c58c6aebb2c6658d75b2e3de
ToppCell	Brain_organoid-organoid_Paulsen_bioRxiv-1_mon-Proliferating-Cycling_Progenitors\|1_mon / Sample Type, Dataset, Time_group, and Cell type.	RASGRP1 PHLPP1 DHX33 DMD UTRN	6.75e-05	199	95	5	358c4b3037f59378db8916a2fbe9ed4830cf1449
ToppCell	3'-GW_trimst-2-SmallIntestine-Neuronal-Glial_immature\|GW_trimst-2 / Celltypes from developing, pediatric, Crohn's, & adult GI tract	NRXN3 DST DLX2 DMD CDH2	6.75e-05	199	95	5	1761669ec514fdb4175042f11b9a31fa5687fc2b
Computational	Genes upregulated in subsets of cells of a given type within various tumors	RASGRP1 AKAP9 SYNE1 MACF1 UTRN DYNC1H1	8.93e-08	49	50	6	GAVISH_3CA_METAPROGRAM_CD8_T_CELLS_CHROMATIN
Computational	Genes upregulated in subsets of cells of a given type within various tumors	DST SYNE1 MACF1 DYNC1H1	8.15e-05	50	50	4	GAVISH_3CA_METAPROGRAM_FIBROBLASTS_CAF_4
Drug	plakin	SPTBN4 SYNE3 DST SYNE1 MACF1 DMD UTRN DYNC1H1	2.05e-09	82	96	8	CID000018752
Disease	Malformations of Cortical Development, Group II	CDH2 DYNC1H1	1.05e-05	2	96	2	C1837249
Disease	Primary ciliary dyskinesia	ODAD1 CCDC65 DNAH5	2.20e-04	36	96	3	cv:C0008780
Disease	Duchenne muscular dystrophy (implicated_via_orthology)	DRP2 DMD UTRN	2.20e-04	36	96	3	DOID:11723 (implicated_via_orthology)
Disease	Primary Ciliary Dyskinesia	ODAD1 CCDC65 DNAH5	4.88e-04	47	96	3	C4551720
Disease	periodontitis	CCDC13 HMX3 DMD CDH2 HSP90AA4P	8.25e-04	223	96	5	EFO_0000649
Disease	Libman-Sacks Disease	RASGRP1 PHRF1 ITGAM	9.04e-04	58	96	3	C0242380
Disease	proliferative diabetic retinopathy	NRXN3 DPP10 UTRN	1.05e-03	61	96	3	EFO_0009322
Disease	amyotrophic lateral sclerosis, age at onset	NRXN3 ARHGEF2	1.07e-03	15	96	2	EFO_0004847, MONDO_0004976
Disease	sphingosine 1-phosphate measurement	DMD MARCO	1.55e-03	18	96	2	EFO_0800185
Disease	Lupus Erythematosus, Systemic	RASGRP1 PHRF1 ITGAM	1.63e-03	71	96	3	C0024141
Disease	Craniofacial Abnormalities	MSX1 MSX2 DLX2 HMX1	1.71e-03	156	96	4	C0376634
Disease	diet measurement, colorectal cancer	MORC1 ST8SIA2	1.73e-03	19	96	2	EFO_0008111, MONDO_0005575
Disease	muscular dystrophy (implicated_via_orthology)	DMD UTRN	2.11e-03	21	96	2	DOID:9884 (implicated_via_orthology)
Disease	diet measurement	NRXN3 DST RNF168 NALCN NRF1 HECW2 DEPDC5 EEA1 DNAH5 RGS3	2.20e-03	1049	96	10	EFO_0008111
Disease	medial orbital frontal cortex volume measurement	NRXN3 HSP90AA4P	2.99e-03	25	96	2	EFO_0010315
Disease	descending aortic diameter	TBC1D16 SPTBN4 MYH6	3.00e-03	88	96	3	EFO_0021788
Disease	systemic scleroderma, systemic lupus erythematosus	PHRF1 ITGAM	3.24e-03	26	96	2	EFO_0000717, MONDO_0007915

Protein segments in the cluster

Peptide	Gene	Start	Entry
WRVISSIEQKTERNE	YWHAB	61	P31946
SLTSDRTRNWVLQQK	AKAP9	3471	Q99996
RTRNWVLQQKIEGET	AKAP9	3476	Q99996
ETRKTISGVALWRQQ	ABCA9	831	Q8IUA7
RDDRSTWIRVIQQSV	ARHGEF2	556	Q92974
INTQWRTVLREVKTR	CCDC65	61	Q8IXS2
TTQINARDWSRKLTQ	RASGRP1	171	O95267
NLTDTQVKTWYQNRR	BARHL1	216	Q9BZE3
AFVWNERRQNKTTTR	DOP1A	1831	Q5JWR5
SEKILLSWVRQSTRN	DMD	136	P11532
LTQTQVKIWFQNRRS	DLX2	191	Q07687
KTVVRWLNRAQNISI	DPP10	331	Q8N608
TSQERQSIIRFWLQN	ANO8	161	Q9HCE9
QRLRDQIKTWVASNE	CNOT3	56	O75175
VNAVWINKERRSSLS	C9orf152	76	Q5JTZ5
KRLLVTVWNRASQSR	RGS3	216	P49796
AQRTKLTEARVQVWF	PAX7	251	P23759
QRSQIANITTVWRAQ	MORC1	671	Q86VD1
AVQNVHSVWTLRRVK	ANAPC1	261	Q9H1A4
KWRIERGVVQQTESL	HECW2	1411	Q9P2P5
KVVVQNERREEWTSL	DEPDC5	256	O75140
AQRQIQEWGVSVRTL	ESPNL	641	Q6ZVH7
ELRIKNLTQSRSTTW	nan	236	O00370
RTWRNDLISATKTQV	ITIH2	356	P19823
TKTTQIEDPRVQWRR	WWC1	76	Q8IX03
NLLISVQSRWEKVVQ	DST	6676	Q03001
LTETQVKIWFQNRRN	HMX3	266	A6NHT5
IWNLVQKTTSSLDRR	ECE2	436	P0DPD6
WFQQQTLQRRVKRSV	PCSK4	101	Q6UW60
QLTETQVKIWFQNRR	HMX1	241	Q9NP08
AWHDVKVTRNLRQVT	NRXN3	341	Q9Y4C0
DVRTEEQKQRVSWTQ	NRF1	246	Q16656
EQKQRVSWTQALRTI	NRF1	251	Q16656
SRALVKRVTWNLQES	PHRF1	1396	Q9P1Y6
LLVSVQSRWEKVVQR	MACF1	2651	O94854
ATQERISLQWLRRIQ	DPP4	306	P27487
TVLNQTWVLKARVND	CYHR1	256	Q6ZMK1
QTRALDKQIQEWETR	ODAD1	76	Q96M63
WITVTRQKRRGTLDQ	CRACDL	826	Q6NV74
RLQEEINEVKTWSNR	IKBIP	121	Q70UQ0
VSVQSRWEKVVQRSI	MACF1	6526	Q9UPN3
RVDEIIWVKTNQLQR	METTL3	451	Q86U44
IWVKTNQLQRIIRTG	METTL3	456	Q86U44
LWQRVTRAINAKDQT	OSBPL8	686	Q9BZF1
EWQSSQRRVSELEKQ	EEA1	1256	Q15075
RVKQWITINEANVLS	GBA3	156	Q9H227
LRLEQRQWKVTVNGV	FCGBP	2521	Q9Y6R7
TLRLEQRQWKVTVNG	FCGBP	3721	Q9Y6R7
TSVIARNQVRLAEVW	GALNT6	421	Q8NCL4
KWTVQVASSQRRVTD	FNIP1	1056	Q8TF40
TWRGRAQQILVLQSK	CCDC13	261	Q8IYE1
VQRVSKTQAWQRTGR	DHX33	391	Q9H6R0
DITSCRQQWTRQILK	ABCG5	56	Q9H222
SRLQVLQAQLTWVRV	MARCO	111	Q9UEW3
SIWERQSNRTVRVTQ	MAN2B2	601	Q9Y2E5
WVNEIRKVLTSQLQA	MCF2L	936	O15068
QSGVNRWIREIQKVT	DYNC1H1	246	Q14204
LSETQVKVWFQNRRT	EMX1	231	Q04741
TKDQVANSTIVQRLW	HSP90AA4P	206	Q58FG1
SERQITIWFQNRRVK	HOXB13	256	Q92826
RNWEIIETTRSKIEQ	DNAH2	1281	Q9P225
RVQVRTWQGTVKQLL	IFT140	501	Q96RY7
VTIKRNWTITRLNGD	CDH2	646	P19022
QINVRWKQLQASVSE	DRP2	316	Q13474
RRQLWKHSVTRVLTQ	DNAH5	6	Q8TE73
SQRQWLVSIHAIRNT	PPM1F	151	P49593
LTETQVKIWFQNRRA	MSX2	181	P35548
SAALVVWLRRQISQK	PDILT	141	Q8N807
NSEKILLSWVRQTTR	UTRN	151	P46939
SWKYQVQTERQRIQT	TRIM34	171	Q9BYJ4
QRNLNVETTRISHWK	TRIM48	171	Q8IWZ4
TAQWRNLSVEVRSVR	SYNE1	591	Q8NF91
NQRWDNLQKRVTSIL	SYNE1	8086	Q8NF91
RQWIVVTTQKLEAHR	SYNE3	661	Q6ZMZ3
TETQVKIWFQNRRTK	NKX1-1	336	Q15270
SLTETQVKIWFQNRR	NKX1-2	201	Q9UD57
LTETQVKIWFQNRRA	MSX1	211	P28360
RTINKQIRDTVSWIF	SNX25	716	Q9H3E2
IQGWIRSVRSQKEVL	NARS2	46	Q96I59
VIDWLVSNQSVRNRQ	PLEK	161	P08567
WRHNQTLSLRIRKQI	ST8SIA2	86	Q92186
VSTLQNQRSQRSWRL	ITGAM	831	P11215
RVLSKANSEVAQWRT	MYH6	1361	P13533
RTQRATERWLQSQTL	CCDC136	261	Q96JN2
VNTFLAVQKWRVSVR	CMTM4	166	Q8IZR5
AVQKWRVSVRQQSTN	CMTM4	171	Q8IZR5
EWEIQPRTKRSSLQQ	ZNF561	81	Q8N587
IVRWTKLLQNITSHQ	TRPM5	296	Q9NZQ8
DTIQRSKWIRAVNRV	THAP9	31	Q9H5L6
AAWRKQIFQQLTERT	TECPR1	576	Q7Z6L1
WRNVQFTVDKDVVRT	TBC1D16	481	Q8TBP0
TTSLVQRRKQAWGRQ	YJEFN3	41	A6XGL0
FQVKLETRQITWSRG	PLCG1	51	P19174
NSRWNRIVELVEQRK	SPTBN4	966	Q9H254
TRRNSLVNVELWTII	RNF168	66	Q8IYW5
WRCVNDKTRTQRIQL	SOSTDC1	131	Q6X4U4
LREKVTQENTSVRWE	MYO18B	1626	Q8IUG5
QRLVSKLNTEVTTWR	MYH16	521	Q9H6N6
LTTEWQCQVQKITRS	TRPM1	1466	Q7Z4N2
LSETQVKVWFQNRRT	VAX2	141	Q9UIW0
RWLRQVSKVASQRIS	PHLPP1	626	O60346
QISRLEQTWVTLRQR	SH2D3C	696	Q8N5H7
RLQEENRKVTNTTPW	TRIM16L	171	Q309B1
RITNILKRSGEQIWS	NALCN	166	Q8IZF0
LQALQTLWSTRERKQ	EXD3	26	Q8N9H8