Cluster composition

Functions

Category	Name	IntersectionWithQuery	PValue	GenesInTerm	GenesInQuery	GenesInTermInQuery	ID
GeneOntologyBiologicalProcess	alternative mRNA splicing, via spliceosome	HNRNPUL1 TIA1 THRAP3 HNRNPU	2.64e-05	79	45	4	GO:0000380
GeneOntologyBiologicalProcess	adaptive immune response	TRAV4 IGLV1-51 IGLV1-47 IGLV1-44 IGLV1-36 CLEC6A HMCES SVEP1 CEACAM1	6.86e-05	838	45	9	GO:0002250
GeneOntologyBiologicalProcess	liver development	CEACAM8 VTN FOXA3 HNRNPD CEACAM1	7.62e-05	202	45	5	GO:0001889
GeneOntologyBiologicalProcess	hepaticobiliary system development	CEACAM8 VTN FOXA3 HNRNPD CEACAM1	8.17e-05	205	45	5	GO:0061008
GeneOntologyBiologicalProcess	immunoglobulin production	IGLV1-51 IGLV1-47 IGLV1-44 IGLV1-36 HMCES	1.74e-04	241	45	5	GO:0002377
GeneOntologyBiologicalProcess	circadian rhythm	USP9X THRAP3 HNRNPD NTRK2 HNRNPU	1.99e-04	248	45	5	GO:0007623
GeneOntologyBiologicalProcess	CRD-mediated mRNA stabilization	HNRNPD HNRNPU	2.53e-04	11	45	2	GO:0070934
GeneOntologyBiologicalProcess	regulation of alternative mRNA splicing, via spliceosome	TIA1 THRAP3 HNRNPU	2.90e-04	59	45	3	GO:0000381
GeneOntologyBiologicalProcess	negative regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay	HNRNPD HNRNPU	3.03e-04	12	45	2	GO:1900152
GeneOntologyCellularComponent	receptor complex	CEACAM8 TRAV4 NR3C2 CUBN NTRK2 ROR1 CEACAM1	2.24e-04	581	45	7	GO:0043235
GeneOntologyCellularComponent	immunoglobulin complex	IGLV1-51 IGLV1-47 IGLV1-44 IGLV1-36	4.43e-04	166	45	4	GO:0019814
GeneOntologyCellularComponent	transforming growth factor beta ligand-receptor complex	CEACAM8 CEACAM1	5.33e-04	16	45	2	GO:0070021
MousePheno	increased abdominal fat pad weight	CEACAM8 NTRK2 CEACAM1	3.69e-05	27	34	3	MP:0009286
Domain	Ig_I-set	CEACAM8 NCAM2 NTRK2 CADM2 ROR1 CEACAM1 VSIG4	1.42e-07	190	40	7	IPR013098
Domain	I-set	CEACAM8 NCAM2 NTRK2 CADM2 ROR1 CEACAM1 VSIG4	1.42e-07	190	40	7	PF07679
Domain	IGc2	CEACAM8 NCAM2 NTRK2 CADM2 ROR1 CEACAM1 VSIG4	5.98e-07	235	40	7	SM00408
Domain	Ig_sub2	CEACAM8 NCAM2 NTRK2 CADM2 ROR1 CEACAM1 VSIG4	5.98e-07	235	40	7	IPR003598
Domain	IG	CEACAM8 NCAM2 NTRK2 CADM2 ROR1 CEACAM1 VSIG4	2.76e-05	421	40	7	SM00409
Domain	Ig_sub	CEACAM8 NCAM2 NTRK2 CADM2 ROR1 CEACAM1 VSIG4	2.76e-05	421	40	7	IPR003599
Domain	Ig_V-set	CEACAM8 NCAM2 CADM2 CEACAM1 VSIG4	6.35e-05	199	40	5	IPR013106
Domain	IG_LIKE	CEACAM8 NCAM2 NTRK2 CADM2 ROR1 CEACAM1 VSIG4	7.31e-05	491	40	7	PS50835
Domain	Ig-like_dom	CEACAM8 NCAM2 NTRK2 CADM2 ROR1 CEACAM1 VSIG4	8.50e-05	503	40	7	IPR007110
Domain	Ephrin_rec_like	SVEP1 TG	2.43e-04	11	40	2	PF07699
Domain	-	CEACAM8 NCAM2 NTRK2 CADM2 ROR1 CEACAM1 VSIG4	4.62e-04	663	40	7	2.60.40.10
Domain	V-set	CEACAM8 CADM2 CEACAM1 VSIG4	6.32e-04	184	40	4	PF07686
Domain	Ig-like_fold	CEACAM8 NCAM2 NTRK2 CADM2 ROR1 CEACAM1 VSIG4	6.72e-04	706	40	7	IPR013783
Domain	ig	CEACAM8 NCAM2 CEACAM1 VSIG4	7.12e-04	190	40	4	PF00047
Domain	Immunoglobulin	CEACAM8 NCAM2 CEACAM1 VSIG4	7.12e-04	190	40	4	IPR013151
Domain	-	HNRNPUL1 HNRNPU	9.15e-04	21	40	2	1.10.720.30
Domain	SAP	HNRNPUL1 HNRNPU	1.01e-03	22	40	2	PF02037
Domain	SAP	HNRNPUL1 HNRNPU	1.10e-03	23	40	2	SM00513
Domain	SAP	HNRNPUL1 HNRNPU	1.30e-03	25	40	2	PS50800
Domain	Ephrin_rec_like	SVEP1 TG	1.30e-03	25	40	2	SM01411
Domain	Tyr-kin_ephrin_A/B_rcpt-like	SVEP1 TG	1.30e-03	25	40	2	IPR011641
Domain	SAP_dom	HNRNPUL1 HNRNPU	1.30e-03	25	40	2	IPR003034
Domain	Ig_2	CEACAM8 CEACAM1	1.07e-02	73	40	2	PF13895
Domain	-	SEC24A SVEP1	1.10e-02	74	40	2	3.40.50.410
Domain	IGv	NCAM2 VSIG4	1.12e-02	75	40	2	SM00406
Domain	ConA-like_dom	HNRNPUL1 SVEP1 HNRNPU	1.14e-02	219	40	3	IPR013320
Domain	C_TYPE_LECTIN_1	CLEC6A PKD1L2	1.27e-02	80	40	2	PS00615
Pathway	REACTOME_FIBRONECTIN_MATRIX_FORMATION	CEACAM8 CEACAM1	8.93e-05	6	35	2	M26970
Pathway	REACTOME_CELL_SURFACE_INTERACTIONS_AT_THE_VASCULAR_WALL	CEACAM8 IGLV1-51 IGLV1-47 IGLV1-44 CEACAM1	1.09e-04	194	35	5	M16312
Pathway	REACTOME_COMPLEMENT_CASCADE	IGLV1-51 IGLV1-47 IGLV1-44 VTN	1.81e-04	115	35	4	M19752
Pathway	REACTOME_CD22_MEDIATED_BCR_REGULATION	IGLV1-51 IGLV1-47 IGLV1-44	4.57e-04	61	35	3	M27581
Pathway	REACTOME_FCGR_ACTIVATION	IGLV1-51 IGLV1-47 IGLV1-44	6.57e-04	69	35	3	M27108
Pathway	REACTOME_SCAVENGING_OF_HEME_FROM_PLASMA	IGLV1-51 IGLV1-47 IGLV1-44	6.57e-04	69	35	3	M27150
Pathway	REACTOME_CREATION_OF_C4_AND_C2_ACTIVATORS	IGLV1-51 IGLV1-47 IGLV1-44	7.14e-04	71	35	3	M1078
Pathway	REACTOME_ROLE_OF_LAT2_NTAL_LAB_ON_CALCIUM_MOBILIZATION	IGLV1-51 IGLV1-47 IGLV1-44	7.14e-04	71	35	3	M27203
Pathway	REACTOME_INITIAL_TRIGGERING_OF_COMPLEMENT	IGLV1-51 IGLV1-47 IGLV1-44	1.01e-03	80	35	3	M6121
Pathway	REACTOME_ROLE_OF_PHOSPHOLIPIDS_IN_PHAGOCYTOSIS	IGLV1-51 IGLV1-47 IGLV1-44	1.09e-03	82	35	3	M27110
Pathway	REACTOME_FCERI_MEDIATED_CA_2_MOBILIZATION	IGLV1-51 IGLV1-47 IGLV1-44	1.25e-03	86	35	3	M27206
Pathway	REACTOME_ANTIGEN_ACTIVATES_B_CELL_RECEPTOR_BCR_LEADING_TO_GENERATION_OF_SECOND_MESSENGERS	IGLV1-51 IGLV1-47 IGLV1-44	1.25e-03	86	35	3	M601
Pathway	REACTOME_FCERI_MEDIATED_MAPK_ACTIVATION	IGLV1-51 IGLV1-47 IGLV1-44	1.29e-03	87	35	3	M27205
Pathway	REACTOME_FCGR3A_MEDIATED_IL10_SYNTHESIS	IGLV1-51 IGLV1-47 IGLV1-44	1.66e-03	95	35	3	M29842
Pathway	REACTOME_BINDING_AND_UPTAKE_OF_LIGANDS_BY_SCAVENGER_RECEPTORS	IGLV1-51 IGLV1-47 IGLV1-44	1.81e-03	98	35	3	M27152
Pubmed	Interactome analyses revealed that the U1 snRNP machinery overlaps extensively with the RNAP II machinery and contains multiple ALS/SMA-causative proteins.	HNRNPUL1 TIA1 CSN1S1 USP9X THRAP3 HNRNPD HNRNPU	2.78e-08	244	45	7	29884807
Pubmed	Cellular RNA binding proteins NS1-BP and hnRNP K regulate influenza A virus RNA splicing.	HNRNPUL1 THRAP3 HNRNPD HNRNPU	2.16e-07	40	45	4	23825951
Pubmed	Sequence and evolution of the human germline V lambda repertoire.	IGLV1-51 IGLV1-47 IGLV1-44 IGLV1-36	4.96e-07	49	45	4	8951372
Pubmed	A systems-wide screen identifies substrates of the SCFβTrCP ubiquitin ligase.	HNRNPUL1 PLCH1 THRAP3 HNRNPD HNRNPU FAM83H	5.41e-07	232	45	6	25515538
Pubmed	Ablation of the oncogenic transcription factor ERG by deubiquitinase inhibition in prostate cancer.	HNRNPUL1 USP9X HNRNPD HNRNPU	6.32e-07	52	45	4	24591637
Pubmed	Immunoprecipitation and mass spectrometry defines an extensive RBM45 protein-protein interaction network.	HNRNPUL1 USP9X THRAP3 HNRNPD HNRNPU	9.15e-07	136	45	5	26979993
Pubmed	hnRNPU/TrkB Defines a Chromatin Accessibility Checkpoint for Liver Injury and Nonalcoholic Steatohepatitis Pathogenesis.	NTRK2 HNRNPU	1.64e-06	2	45	2	31469911
Pubmed	Soluble CEACAM8 interacts with CEACAM1 inhibiting TLR2-triggered immune responses.	CEACAM8 CEACAM1	1.64e-06	2	45	2	24743304
Pubmed	Dynamics of alternative splicing during somatic cell reprogramming reveals functions for RNA-binding proteins CPSF3, hnRNP UL1, and TIA1.	HNRNPUL1 TIA1	4.91e-06	3	45	2	34082786
Pubmed	GPI-anchored CEA family glycoproteins CEA and CEACAM6 mediate their biological effects through enhanced integrin alpha5beta1-fibronectin interaction.	CEACAM8 CEACAM1	4.91e-06	3	45	2	17167768
Pubmed	TIA nuclear proteins regulate the alternate splicing of lysyl hydroxylase 2.	TIA1 PLOD2	4.91e-06	3	45	2	19110540
Pubmed	Diverse oligomeric states of CEACAM IgV domains.	CEACAM8 CEACAM1	9.81e-06	4	45	2	26483485
Pubmed	Interdependency of CEACAM-1, -3, -6, and -8 induced human neutrophil adhesion to endothelial cells.	CEACAM8 CEACAM1	9.81e-06	4	45	2	19077207
Pubmed	One-megabase sequence analysis of the human immunoglobulin lambda gene locus.	IGLV1-51 IGLV1-47 IGLV1-44 IGLV1-36	1.23e-05	109	45	4	9074928
Pubmed	The proximal region of the 3'-untranslated region of cyclooxygenase-2 is recognized by a multimeric protein complex containing HuR, TIA-1, TIAR, and the heterogeneous nuclear ribonucleoprotein U.	TIA1 HNRNPU	1.63e-05	5	45	2	12855701
Pubmed	Proteomic characterization of chromosomal common fragile site (CFS)-associated proteins uncovers ATRX as a regulator of CFS stability.	IGLV1-51 IGLV1-47 IGLV1-44 HNRNPUL1 THRAP3 HNRNPD HNRNPU	1.93e-05	652	45	7	31180492
Pubmed	New roles for the de-ubiquitylating enzyme OTUD4 in an RNA-protein network and RNA granules.	HNRNPUL1 TIA1 PLOD2 THRAP3 HNRNPD HNRNPU	2.79e-05	462	45	6	31138677
Pubmed	HIV-1 Vpr induces cell cycle arrest and enhances viral gene expression by depleting CCDC137.	HNRNPUL1 THRAP3 HNRNPD HNRNPU	4.10e-05	148	45	4	32538781
Pubmed	Genome-wide association study of bipolar disorder in European American and African American individuals.	NTRK2 ROR1	4.56e-05	8	45	2	19488044
Pubmed	Global expression analysis of gene regulatory pathways during endocrine pancreatic development.	VTN CUBN FOXA3	5.07e-05	55	45	3	14660441
Pubmed	TNRC6 proteins modulate hepatitis C virus replication by spatially regulating the binding of miR-122/Ago2 complexes to viral RNA.	HNRNPUL1 TIA1 THRAP3 HNRNPD HNRNPU	5.52e-05	317	45	5	30997501
Pubmed	Regulation of alternative splicing by SRrp86 and its interacting proteins.	THRAP3 HNRNPD HNRNPU	5.64e-05	57	45	3	14559993
Pubmed	Expression of the immunoglobulin superfamily cell adhesion molecules in the developing spinal cord and dorsal root ganglion.	NCAM2 CADM2 ROR1 CEACAM1	5.82e-05	162	45	4	25826454
Pubmed	IFIT1 is an antiviral protein that recognizes 5'-triphosphate RNA.	IFIT3 HNRNPD HNRNPU	5.94e-05	58	45	3	21642987
Pubmed	Chromosomal location of fifteen unique mouse KRAB-containing zinc finger loci.	NR3C2 NTRK2 TG	6.91e-05	61	45	3	8662221
Pubmed	Deubiquitinase FAM/USP9X interacts with the E3 ubiquitin ligase SMURF1 protein and protects it from ligase activity-dependent self-degradation.	USP9X THRAP3 HNRNPD HNRNPU	7.35e-05	172	45	4	23184937
Pubmed	The Deubiquitinating Enzyme USP48 Interacts with the Retinal Degeneration-Associated Proteins UNC119a and ARL3.	HNRNPUL1 TIA1 HNRNPD CADM2 GOT1 HNRNPU	7.49e-05	552	45	6	36293380
Pubmed	KCTD13-mediated ubiquitination and degradation of GluN1 regulates excitatory synaptic transmission and seizure susceptibility.	NCAM2 PLCH1 GRM3 USP9X THRAP3 HNRNPD CADM2 GOT1 HNRNPU	7.65e-05	1431	45	9	37142655
Pubmed	Genome-wide association for abdominal subcutaneous and visceral adipose reveals a novel locus for visceral fat in women.	NCAM2 NR3C2 DNAH5 CADM2	1.15e-04	193	45	4	22589738
Pubmed	Age-dependent insulin resistance in male mice with null deletion of the carcinoembryonic antigen-related cell adhesion molecule 2 gene.	CEACAM8 CEACAM1	1.47e-04	14	45	2	28567513
Pubmed	Bgp2, a new member of the carcinoembryonic antigen-related gene family, encodes an alternative receptor for mouse hepatitis viruses.	CEACAM8 CEACAM1	1.47e-04	14	45	2	8207827
Pubmed	Molecular cloning and localization of a CEACAM2 isoform, CEACAM2-L, expressed in spermatids in mouse testis.	CEACAM8 CEACAM1	1.47e-04	14	45	2	23070997
Pubmed	Comparison of expression patterns and cell adhesion properties of the mouse biliary glycoproteins Bbgp1 and Bbgp2.	CEACAM8 CEACAM1	1.47e-04	14	45	2	10491101
Pubmed	Increased metabolic rate and insulin sensitivity in male mice lacking the carcino-embryonic antigen-related cell adhesion molecule 2.	CEACAM8 CEACAM1	1.47e-04	14	45	2	22159884
Pubmed	An oocyte-specific ELAVL2 isoform is a translational repressor ablated from meiotically competent antral oocytes.	TIA1 HNRNPD	1.47e-04	14	45	2	24553115
Pubmed	Carcinoembryonic antigen-related cell adhesion molecule 1 expression and signaling in human, mouse, and rat leukocytes: evidence for replacement of the short cytoplasmic domain isoform by glycosylphosphatidylinositol-linked proteins in human leukocytes.	CEACAM8 CEACAM1	1.47e-04	14	45	2	11994468
Pubmed	CEACAM2 positively regulates integrin αIIbβ3-mediated platelet functions.	CEACAM8 CEACAM1	1.47e-04	14	45	2	27161904
Pubmed	Carcinoembryonic antigen-related cell adhesion molecule 2 controls energy balance and peripheral insulin action in mice.	CEACAM8 CEACAM1	1.47e-04	14	45	2	20381490
Pubmed	Host factors that interact with the pestivirus N-terminal protease, Npro, are components of the ribonucleoprotein complex.	HNRNPUL1 TIA1 HNRNPU	1.61e-04	81	45	3	24965446
Pubmed	CEACAM2-L on spermatids interacts with poliovirus receptor on Sertoli cells in mouse seminiferous epithelium.	CEACAM8 CEACAM1	1.70e-04	15	45	2	24948196
Pubmed	Role of mouse hepatitis virus (MHV) receptor murine CEACAM1 in the resistance of mice to MHV infection: studies of mice with chimeric mCEACAM1a and mCEACAM1b.	CEACAM8 CEACAM1	1.70e-04	15	45	2	20410265
Pubmed	Zbtb7b engages the long noncoding RNA Blnc1 to drive brown and beige fat development and thermogenesis.	THRAP3 HNRNPU	1.70e-04	15	45	2	28784777
Pubmed	Increased Glucose-induced Secretion of Glucagon-like Peptide-1 in Mice Lacking the Carcinoembryonic Antigen-related Cell Adhesion Molecule 2 (CEACAM2).	CEACAM8 CEACAM1	1.70e-04	15	45	2	26586918
Pubmed	Characterization of SARS-CoV-2 proteins reveals Orf6 pathogenicity, subcellular localization, host interactions and attenuation by Selinexor.	USP9X THRAP3 HNRNPD HNRNPU XPOT	1.80e-04	408	45	5	33766124
Pubmed	USP9X controls translation efficiency via deubiquitination of eukaryotic translation initiation factor 4A1.	USP9X HNRNPD HNRNPU	1.86e-04	85	45	3	29228324
Pubmed	TRIM33 drives prostate tumor growth by stabilizing androgen receptor from Skp2-mediated degradation.	HNRNPUL1 THRAP3 HNRNPD XPOT	1.89e-04	220	45	4	35785414
Pubmed	The RNA-binding protein HuR is a novel target of Pirh2 E3 ubiquitin ligase.	HNRNPUL1 USP9X HNRNPD HNRNPU	1.89e-04	220	45	4	34091597
Pubmed	Differences in tissue-specific and embryonic expression of mouse Ceacam1 and Ceacam2 genes.	CEACAM8 CEACAM1	1.94e-04	16	45	2	11284729
Pubmed	CEACAM2 negatively regulates hemi (ITAM-bearing) GPVI and CLEC-2 pathways and thrombus growth in vitro and in vivo.	CEACAM8 CEACAM1	1.94e-04	16	45	2	25085348
Pubmed	Loss of TRIM31 promotes breast cancer progression through regulating K48- and K63-linked ubiquitination of p53.	HNRNPUL1 TIA1 THRAP3 HNRNPD HNRNPU	2.08e-04	421	45	5	34650049
Pubmed	RioK1, a new interactor of protein arginine methyltransferase 5 (PRMT5), competes with pICln for binding and modulates PRMT5 complex composition and substrate specificity.	HNRNPUL1 IFIT3 HNRNPD HNRNPU XPOT	2.17e-04	425	45	5	21081503
Pubmed	Cleavage and polyadenylation specificity factor 1 (CPSF1) regulates alternative splicing of interleukin 7 receptor (IL7R) exon 6.	HNRNPUL1 HNRNPD HNRNPU	2.20e-04	90	45	3	23151878
Pubmed	A receptor for activated C kinase is part of messenger ribonucleoprotein complexes associated with polyA-mRNAs in neurons.	HNRNPD HNRNPU	2.20e-04	17	45	2	12388589
Pubmed	A genome-wide meta-analysis of association studies of Cloninger's Temperament Scales.	CADM2 TG	2.20e-04	17	45	2	22832960
Pubmed	Expression and functional analysis of genes deregulated in mouse placental overgrowth models: Car2 and Ncam1.	NCAM2 CA1	2.47e-04	18	45	2	16247769
Pubmed	Ovarian tumorB1-mediated heat shock transcription factor 1 deubiquitination is critical for glycolysis and development of endometriosis.	HNRNPUL1 THRAP3 HNRNPD HNRNPU	2.48e-04	236	45	4	36339263
Pubmed	Proteomic dissection of the von Hippel-Lindau (VHL) interactome.	PLOD2 HNRNPD HNRNPU	2.82e-04	98	45	3	21942715
Pubmed	ARHGAP24 represses β-catenin transactivation-induced invasiveness in hepatocellular carcinoma mainly by acting as a GTPase-independent scaffold.	HNRNPUL1 PLOD2 GOT1 HNRNPU XPOT	2.86e-04	451	45	5	36168627
Pubmed	Anticancer sulfonamides target splicing by inducing RBM39 degradation via recruitment to DCAF15.	HNRNPUL1 THRAP3 HNRNPD SVEP1 GOT1 HNRNPU	3.02e-04	714	45	6	28302793
Pubmed	Structural basis for endosomal trafficking of diverse transmembrane cargos by PX-FERM proteins.	NR3C2 NTRK2 ROR1	3.09e-04	101	45	3	23382219
Pubmed	Identifying biological pathways that underlie primordial short stature using network analysis.	VTN HNRNPUL1 USP9X THRAP3 HNRNPD HNRNPU FAM83H	3.21e-04	1024	45	7	24711643
Pubmed	Circular RNA circPVT1 promotes nasopharyngeal carcinoma metastasis via the β-TrCP/c-Myc/SRSF1 positive feedback loop.	HNRNPUL1 THRAP3 HNRNPD HNRNPU	3.57e-04	260	45	4	36199071
Pubmed	Comprehensive proteomic analysis of the human spliceosome.	HNRNPUL1 HNRNPD HNRNPU	3.86e-04	109	45	3	12226669
Pubmed	Characterization of gene regulation and protein interaction networks for Matrin 3 encoding mutations linked to amyotrophic lateral sclerosis and myopathy.	HNRNPUL1 THRAP3 HNRNPU	3.86e-04	109	45	3	29511296
Pubmed	In-depth proteomic analyses of exosomes isolated from expressed prostatic secretions in urine.	CEACAM8 IGLV1-51 VTN CUBN GOT1 CA1 CEACAM1	4.18e-04	1070	45	7	23533145
Pubmed	mTORC1 activity regulates post-translational modifications of glycine decarboxylase to modulate glycine metabolism and tumorigenesis.	HNRNPUL1 THRAP3 HNRNPD HNRNPU	4.36e-04	274	45	4	34244482
Pubmed	The splicing factor FUBP1 is required for the efficient splicing of oncogene MDM2 pre-mRNA.	HNRNPD HNRNPU	4.44e-04	24	45	2	24798327
Pubmed	A dynamic expression survey identifies transcription factors relevant in mouse digestive tract development.	NR3C2 CUBN CA1	4.87e-04	118	45	3	16971476
Pubmed	A high-throughput approach for measuring temporal changes in the interactome.	HNRNPUL1 PLOD2 USP9X HNRNPD SEC24A GOT1 HNRNPU XPOT	4.99e-04	1455	45	8	22863883
Pubmed	A Noncanonical Role of Fructose-1, 6-Bisphosphatase 1 Is Essential for Inhibition of Notch1 in Breast Cancer.	HNRNPUL1 THRAP3 HNRNPD HNRNPU	5.12e-04	286	45	4	32041737
Pubmed	Arginine methylation of SARS-Cov-2 nucleocapsid protein regulates RNA binding, its ability to suppress stress granule formation, and viral replication.	HNRNPUL1 HNRNPD HNRNPU	5.24e-04	121	45	3	34029587
Pubmed	Ring finger protein 12 activates AKT signalling to promote the progression of liver cancer by interacting with EGFR.	IGLV1-51 HNRNPUL1 TIA1 HNRNPU	5.32e-04	289	45	4	37132043
Pubmed	Strain distribution pattern for SSLP markers in the SWXJ recombinant inbred strain set: chromosomes 7 to X.	CEACAM1 TG	6.06e-04	28	45	2	8672132
Pubmed	Identification of new putative susceptibility genes for several psychiatric disorders by association analysis of regulatory and non-synonymous SNPs of 306 genes involved in neurotransmission and neurodevelopment.	NCAM2 NR3C2 GRM3 NTRK2	6.12e-04	300	45	4	19086053
Pubmed	R2TP/Prefoldin-like component RUVBL1/RUVBL2 directly interacts with ZNHIT2 to regulate assembly of U5 small nuclear ribonucleoprotein.	HNRNPUL1 USP9X FAM83H XPOT	6.12e-04	300	45	4	28561026
Pubmed	Interactome Analysis Reveals a Novel Role for RAD6 in the Regulation of Proteasome Activity and Localization in Response to DNA Damage.	HNRNPUL1 THRAP3 HNRNPD	6.60e-04	131	45	3	28031328
Pubmed	Characterization of the endogenous nonecotropic murine leukemia viruses of NZB/B1NJ and SM/J inbred strains.	CA1 TG	6.96e-04	30	45	2	1311971
Pubmed	Identifying and quantifying in vivo methylation sites by heavy methyl SILAC.	HNRNPD HNRNPU	6.96e-04	30	45	2	15782174
Pubmed	Arginine methylation and ubiquitylation crosstalk controls DNA end-resection and homologous recombination repair.	HNRNPUL1 USP9X THRAP3 HNRNPD HNRNPU	7.10e-04	551	45	5	34728620
Pubmed	Interaction of Sox2 with RNA binding proteins in mouse embryonic stem cells.	TIA1 HNRNPD HNRNPU	7.20e-04	135	45	3	31077711
Pubmed	The NXSM recombinant inbred strains of mice: genetic profile for 58 loci including the Mtv proviral loci.	CA1 TG	7.43e-04	31	45	2	2165966
Pubmed	NFX1-123 and poly(A) binding proteins synergistically augment activation of telomerase in human papillomavirus type 16 E6-expressing cells.	USP9X HNRNPU	7.92e-04	32	45	2	17267499
Pubmed	Let-7b/c enhance the stability of a tissue-specific mRNA during mammalian organogenesis as part of a feedback loop involving KSRP.	TIA1 HNRNPD	8.43e-04	33	45	2	22844247
Pubmed	Joint influence of small-effect genetic variants on human longevity.	NCAM2 SVEP1	8.94e-04	34	45	2	20834067
Pubmed	SERBP1 Promotes Stress Granule Clearance by Regulating 26S Proteasome Activity and G3BP1 Ubiquitination and Protects Male Germ Cells from Thermostimuli Damage.	PLOD2 HMCES USP9X HNRNPD HNRNPU XPOT	8.95e-04	878	45	6	37223481
Pubmed	NudCL2 regulates cell migration by stabilizing both myosin-9 and LIS1 with Hsp90.	VTN THRAP3 HNRNPD HNRNPU	9.02e-04	333	45	4	32665550
Pubmed	ARIH2 Is a Vif-Dependent Regulator of CUL5-Mediated APOBEC3G Degradation in HIV Infection.	HNRNPUL1 TIA1 HNRNPD HNRNPU	9.33e-04	336	45	4	31253590
Pubmed	Myristoylated alanine-rich C-kinase substrate effector domain phosphorylation regulates the growth and radiation sensitization of glioblastoma.	PLOD2 HNRNPU	9.48e-04	35	45	2	30942445
Pubmed	Identification of intracellular proteins associated with the EBV-encoded nuclear antigen 5 using an efficient TAP procedure and FT-ICR mass spectrometry.	HNRNPD HNRNPU XPOT	9.96e-04	151	45	3	18457437
Pubmed	Molecular composition of IMP1 ribonucleoprotein granules.	HNRNPD HNRNPU	1.00e-03	36	45	2	17289661
Pubmed	hnRNPA1 couples nuclear export and translation of specific mRNAs downstream of FGF-2/S6K2 signalling.	HNRNPUL1 USP9X HNRNPD HNRNPU	1.04e-03	346	45	4	25324306
Pubmed	WW domains provide a platform for the assembly of multiprotein networks.	HNRNPUL1 THRAP3 HNRNPU	1.05e-03	154	45	3	16055720
Pubmed	WWP2 ubiquitylates RNA polymerase II for DNA-PK-dependent transcription arrest and repair at DNA breaks.	HNRNPUL1 USP9X THRAP3 HNRNPD HNRNPU	1.16e-03	615	45	5	31048545
Pubmed	Noncanonical regulation of alkylation damage resistance by the OTUD4 deubiquitinase.	USP9X THRAP3	1.18e-03	39	45	2	25944111
Pubmed	Quantitative trait loci affecting the 3D skull shape and size in mouse and prioritization of candidate genes in-silico.	ALX1 THRAP3	1.18e-03	39	45	2	25859222
Interaction	RBM45 interactions	ALX1 HNRNPUL1 USP9X THRAP3 HNRNPD HNRNPU	3.64e-06	207	41	6	int:RBM45
Interaction	SRA1 interactions	ALX1 HNRNPD SEC24A HNRNPU	2.41e-05	83	41	4	int:SRA1
Cytoband	22q11.2	IGLV1-51 IGLV1-47 IGLV1-44 IGLV1-36	6.09e-06	120	45	4	22q11.2
Cytoband	19q13.2	CEACAM8 HNRNPUL1 CEACAM1	5.69e-04	164	45	3	19q13.2
Cytoband	Ensembl 112 genes in cytogenetic band chr22q11	IGLV1-51 IGLV1-47 IGLV1-44 IGLV1-36	7.58e-04	419	45	4	chr22q11
GeneFamily	Immunoglobulin lambda locus at 22q11.2	IGLV1-51 IGLV1-47 IGLV1-44 IGLV1-36	1.36e-05	89	30	4	353
GeneFamily	Blood group antigens\|CD molecules\|I-set domain containing\|Immunoglobulin like domain containing	NCAM2 NTRK2 CADM2 ROR1	1.39e-04	161	30	4	593
GeneFamily	Adenosine receptors\|V-set domain containing	CEACAM8 CADM2 CEACAM1 VSIG4	1.45e-04	163	30	4	590
GeneFamily	CD molecules\|V-set domain containing\|Immunoglobulin like domain containing\|Carcinoembryonic antigen related cell adhesion molecule family	CEACAM8 CEACAM1	7.18e-04	24	30	2	906
GeneFamily	Receptor Tyrosine Kinases\|CD molecules	NTRK2 ROR1	2.00e-03	40	30	2	321
GeneFamily	Immunoglobulin like domain containing	CEACAM8 CEACAM1 VSIG4	3.93e-03	193	30	3	594
CoexpressionAtlas	AravindRamakr_StemCell-HD_top-relative-expression-ranked_500	IGLV1-51 IGLV1-47 IGLV1-44 GRM3 FOXA3 CADM2 CA1	5.17e-05	489	43	7	Arv_SC-HD_500
CoexpressionAtlas	AravindRamakr_StemCell_from_inducedPluripotentialStemCells_derived from_from_fibroblast_top-relative-expression-ranked_500	IGLV1-51 IGLV1-47 IGLV1-44 GRM3 FOXA3 CADM2 CA1	5.17e-05	489	43	7	Arv_SC_fibroblast_500
ToppCell	facs-Thymus-Thymus_Epithelium-18m-Lymphocytic\|Thymus / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation	NCAM2 PKD1L2 PLCH1 DNAH5 CADM2	1.16e-06	184	45	5	ea7a7e2bac46d4d2c31a5d576b38a032b5335062
ToppCell	facs-Thymus-Thymus_Epithelium-18m-Lymphocytic-thymocyte\|Thymus / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation	NCAM2 PKD1L2 PLCH1 DNAH5 CADM2	1.16e-06	184	45	5	2cbed6462fea2622871bb7e49b0df3d984239281
ToppCell	facs-Thymus-Thymus_Epithelium-18m-Lymphocytic-proliferating_thymocyte;_DN_to_DP_transition,_dividing_(some_are_Cd8+/_Cd4+,_some_undergoing_VDJ_recombination)\|Thymus / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation	NCAM2 PKD1L2 PLCH1 DNAH5 CADM2	1.16e-06	184	45	5	2b19a8c5f823e00812908b23e66bb4e563278aff
ToppCell	COVID_vent-Lymphocytic-Plasma_cell-IgM_Plasmablast\|COVID_vent / Disease condition, Lineage, Cell class and subclass	IGLV1-51 IGLV1-47 IGLV1-44 IGLV1-36 SEC24A	1.58e-06	196	45	5	026a06d8d2089806823e6f6453d3ede84ae93bc6
ToppCell	COVID_non-vent-Lymphocytic-Plasma_cell-IgA_Plasmablast\|COVID_non-vent / Disease condition, Lineage, Cell class and subclass	IGLV1-51 IGLV1-47 IGLV1-44 IGLV1-36 SEC24A	1.62e-06	197	45	5	fdbf4eb9fa5aefb4ffb307494fe4774bf5e0aaeb
ToppCell	LA-04._Ventricular_Cardiomyocyte_I\|World / Chamber and Cluster_Paper	MINAR2 ALX1 IFIT3 CADM2	5.38e-06	114	45	4	ca69dddbdc02fa5718c56362649cd4b9b54f94ce
ToppCell	PBMC_fresh-frozen-Severe-critical_progression_d12-22-Lymphocytic-Lymphocytic_T-mature_alpha-beta_T_cell-T_CD4_c05-FOS\|Severe-critical_progression_d12-22 / Compartment, severity and other cell annotations on 10x 3' data (130k)	NR3C2 DNAH5 CADM2 TG	1.47e-05	147	45	4	2d9044ddf01b6838a44a4518b442d7e7cb0bf910
ToppCell	3'_v3-Lung-Lymphocytic_B_plasma-Plasma_cells\|Lung / Manually curated celltypes from each tissue	IGLV1-51 IGLV1-47 IGLV1-44 IGLV1-36	2.26e-05	164	45	4	3b6a32ba53d05f6818fe950ac426f489383b645a
ToppCell	LV-11._Adipocyte\|LV / Chamber and Cluster_Paper	CEACAM8 SVEP1 NTRK2 CEACAM1	2.78e-05	173	45	4	c2d3fcb3de71015d03d14c63450853d2b03ffa71
ToppCell	5'-GW_trimst-2-SmallIntestine-Hematopoietic-B_cells-Pre-B\|GW_trimst-2 / Celltypes from developing, pediatric, Crohn's, & adult GI tract	IGLV1-51 IGLV1-47 IGLV1-44 HMCES	3.11e-05	178	45	4	34ef4d36ddfb1cdeaaaf5d952e1ad6dc2785ce1e
ToppCell	facs-Heart-RA-18m\|Heart / Tongue_Heart_Limb_Muscle_Aorta_Diaphragm - method, tissue, subtissue, age, lineage, cell ontology and free annotation	HNRNPUL1 THRAP3 HNRNPD HNRNPU	3.11e-05	178	45	4	b505e2550860e777535ee95f29c936242fd607f1
ToppCell	3'-Adult-Distal_Rectal-Epithelial-Tuft-related\|Adult / Celltypes from developing, pediatric, Crohn's, & adult GI tract	VTN NTRK2 CA1 CEACAM1	3.11e-05	178	45	4	a95bb77a2c2ce7c38989e6f971812f7ee9f5bd4b
ToppCell	PBMC-Control-Lymphocyte-B-Plasmablast-Plasmablast-Plasmablast\|Control / Location, Disease Group, Cell group, Cell class and sub_cluster (2021.03.01)	IGLV1-51 IGLV1-47 IGLV1-44 IGLV1-36	3.18e-05	179	45	4	494febe77c6d4e6a2c6f0928bbf4c84b0301f188
ToppCell	healthy_donor-Lymphocytic-Plasma_cell\|healthy_donor / Disease condition, Lineage, Cell class and subclass	IGLV1-51 IGLV1-47 IGLV1-44 IGLV1-36	3.85e-05	188	45	4	bd53b0371154cff680226897b61c9809a239d1b6
ToppCell	10x5'v1-week_12-13-Mesenchymal_osteo-stroma-chondrocyte\|week_12-13 / cell types per 3 fetal stages;per 3',per 5'	IGLV1-51 FOXA3 SVEP1 CADM2	3.85e-05	188	45	4	c9270517e6940e9793586f67f02431210552f278
ToppCell	droplet-Large_Intestine-COLON_PROXIMAL\|Large_Intestine / Large_Intestine_Pancreas_Liver - method, tissue, subtissue, age, lineage, cell ontology and free annotation	NR3C2 HNRNPUL1 THRAP3 CEACAM1	4.09e-05	191	45	4	60c986d2dcbc19d9338c03da6cb5e1d92fd48f8e
ToppCell	droplet-Large_Intestine-COLON_PROXIMAL-30m\|Large_Intestine / Large_Intestine_Pancreas_Liver - method, tissue, subtissue, age, lineage, cell ontology and free annotation	NR3C2 HNRNPUL1 THRAP3 CEACAM1	4.09e-05	191	45	4	973117730d6ba5f127e7a0bfabfd0ff2ca7ac131
ToppCell	normal_Lymph_Node-B_lymphocytes-Plasma_cells\|B_lymphocytes / Location, Cell class and cell subclass	YIPF2 IGLV1-51 IGLV1-47 IGLV1-44	4.18e-05	192	45	4	119832d4aee29ddda2485fc3e5dcdaacf833cc30
ToppCell	5'-GW_trimst-2-SmallIntestine-Hematopoietic-B_cells\|GW_trimst-2 / Celltypes from developing, pediatric, Crohn's, & adult GI tract	IGLV1-51 IGLV1-47 IGLV1-44 HMCES	4.26e-05	193	45	4	e9bbc2c4516341524686aa095aae4ae7e80a688a
ToppCell	11.5-Airway-Mesenchymal-Cartilage\|Airway / Age, Tissue, Lineage and Cell class	NCAM2 ALX1 FOXA3 PLOD2	4.26e-05	193	45	4	d4779d92a4dd4b8b656383e6f4fce76d3bd70931
ToppCell	5'-Adult-LargeIntestine\|Adult / Celltypes from developing, pediatric, Crohn's, & adult GI tract	IGLV1-51 IGLV1-44 CA1 CEACAM1	4.44e-05	195	45	4	600174e35574fe7c44dd923adcf43686e7b01e39
ToppCell	Parenchymal-10x5prime-Immune_Lymphocytic-B-B_cell\|10x5prime / Cell types per location group and 10X technology with lineage, and cell group designations	IGLV1-51 IGLV1-47 IGLV1-44 IGLV1-36	4.62e-05	197	45	4	76465bb2408c7c75f694e8f7cf1a606b796afc3a
ToppCell	COVID-19-Fibroblasts-Intermediate_pathological_FB\|COVID-19 / group, cell type (main and fine annotations)	NCAM2 PLOD2 SVEP1 ROR1	4.62e-05	197	45	4	f1c8936986123a3151140c374fcd62d6705c530b
ToppCell	COVID-19-Fibroblasts\|COVID-19 / group, cell type (main and fine annotations)	NCAM2 PLOD2 SVEP1 ROR1	4.62e-05	197	45	4	fb847f2277609c31fffcdf49517243ce0684facf
ToppCell	COVID_non-vent-Lymphocytic-Plasma_cell\|COVID_non-vent / Disease condition, Lineage, Cell class and subclass	IGLV1-51 IGLV1-47 IGLV1-44 SEC24A	4.62e-05	197	45	4	1e63879633f20646e44873ae6b662f6faf4806fd
ToppCell	LA-04._Ventricular_Cardiomyocyte_I\|LA / Chamber and Cluster_Paper	ALX1 IFIT3 CADM2	1.87e-04	110	45	3	34dcd1e1e16e8b6088ff9a7a40532e8bd000c121
ToppCell	Control-CD4+_T_activated\|Control / Disease condition and Cell class	DNAH5 IFIT3 CADM2	2.19e-04	116	45	3	e3d1a90a229f5697b2b715574bb96790a435f73b
ToppCell	PBMC-Mild-Myeloid-Neutrophil-immature_Neutrophil-Neu_4\|Mild / Location, Disease Group, Cell group, Cell class and sub_cluster (2021.03.09)	CEACAM8 PLCH1 SVEP1	2.79e-04	126	45	3	6cb89754010d64875e115da6c5805efac7a4a82d
ToppCell	PBMC-Mild-Myeloid-Neutrophil-immature_Neutrophil-Neu_4\|Mild / Location, Disease Group, Cell group, Cell class and sub_cluster (2021.03.01)	CEACAM8 PLCH1 SVEP1	2.79e-04	126	45	3	69b2525b92d1c7c35b21cc701f5fa52a9c1b94bb
ToppCell	Fetal_brain-organoid_Tanaka_cellReport-GW16-Mesenchymal-Mesoderm\|GW16 / Sample Type, Dataset, Time_group, and Cell type.	NTRK2 XPOT TG	3.72e-04	139	45	3	d441c29852c28928ecb696b4b95e31b30c17116b
ToppCell	COVID-19-kidney-Technical/muscle_(EC)\|kidney / Disease (COVID-19 only), tissue and cell type	NCAM2 GRM3 CADM2	3.72e-04	139	45	3	64c35411bbe67acb5010dadc4b0b1be0f8b17737
ToppCell	primary_visual_cortex-Non-neuronal-leptomeningeal_cell-VLMC-VLMC_Spp1_Col15a1\|primary_visual_cortex / Per Region, Lineage, Cell class, Cell type, Cell subtype	VTN SVEP1 ROR1	3.96e-04	142	45	3	f4e4cde228149d5a536fbf0517ed71d81e296faf
ToppCell	remission-multiplets\|World / disease stage, cell group and cell class	CEACAM8 CA1 CEACAM1	3.96e-04	142	45	3	286d01b4f95e9c0b38b91958f925f3797dffd596
ToppCell	metastatic_Lymph_Node-B_lymphocytes-Plasma_cells\|metastatic_Lymph_Node / Location, Cell class and cell subclass	IGLV1-51 IGLV1-47 IGLV1-44	3.96e-04	142	45	3	5ba3a33c2ee20be8baaed97536ca6e9d1de6752f
ToppCell	severe_COVID-19-B_cell\|World / disease group, cell group and cell class (v2)	CEACAM8 CUBN CEACAM1	4.05e-04	143	45	3	28b0e168126a9fe60541dc12bfab385b7a0a2342
ToppCell	severe_COVID-19-B_cell\|severe_COVID-19 / disease group, cell group and cell class (v2)	CEACAM8 CUBN CEACAM1	4.13e-04	144	45	3	c7f696e55e2d959c58ec32640c71ef86ee25203c
ToppCell	remission-multiplets\|remission / disease stage, cell group and cell class	CEACAM8 CA1 CEACAM1	4.56e-04	149	45	3	e9974260a5f2999b363f306cae005698c912893a
ToppCell	TCGA-Lung\|World / Sample_Type by Project: Shred V9	IGLV1-51 IGLV1-44 IGLV1-36	4.65e-04	150	45	3	8c133206786e8f22bb70f2a7de9c0cb7f9ea9313
ToppCell	mild-Myeloid-Neutrophils_4\|Myeloid / Cohort 2 (Rhapsody WB + PBMC) with disease condition, lineage and cell classs	IGLV1-47 IFIT3 CA1	4.65e-04	150	45	3	979566663d1110475f1e017c2f9890aca4b6f701
ToppCell	Globus_pallidus-Macroglia-POLYDENDROCYTE-P3-Tnr-Polydendrocyte.Tnr.Cyth3_(Cyth3)\|Globus_pallidus / BrainAtlas - Mouse McCarroll V32	THRAP3 HNRNPU REV1	4.93e-04	153	45	3	88ca2d2c2ab19fbee13e18951b993ee05dd30f67
ToppCell	Globus_pallidus-Macroglia-POLYDENDROCYTE-P3-Tnr-Polydendrocyte.Tnr.Cyth3_(Cyth3)-\|Globus_pallidus / BrainAtlas - Mouse McCarroll V32	THRAP3 HNRNPU REV1	4.93e-04	153	45	3	553dff9688a1996d8f4ba16e60c683593d781389
ToppCell	metastatic_Lymph_Node-Myeloid_cells-Alveolar_Mac\|metastatic_Lymph_Node / Location, Cell class and cell subclass	CEACAM8 CELA2B VSIG4	5.12e-04	155	45	3	03fd443740272dcb547e39deaf7ae89b8307f241
ToppCell	Myeloid-Myeloid-F\|Myeloid / shred on cell class and cell subclass (v4)	CLEC6A IFIT3 HMCES	5.21e-04	156	45	3	d6317843ae5c5749452889e768c187a9d9e8c7fe
ToppCell	Mid-temporal_gyrus_(MTG)-Neuronal-Glutamatergic_Excit-Glut_C-D_(RORB)-Glut_D_(IT_RORB_THEMIS_LINC00507)_2-Exc_L3-5_RORB_HSPB3\|Mid-temporal_gyrus_(MTG) / Sample groups (6 Anatomical region groups), with 5 level hierarchy of cell types	CLEC6A PLCH1 DNAH5	5.41e-04	158	45	3	1f38b294867ade78d8214ed2e81c638bf49f7232
ToppCell	356C-Fibroblasts-Fibroblast-D-\|Fibroblasts / Donor, Lineage, Cell class and subclass (all cells)	CELA2B CLEC6A VSIG4	5.51e-04	159	45	3	299e2162a82e31196d7f3a110c2db622349edfff
ToppCell	renal_cortex_nuclei-Hypertensive_with+without-CKD-Mesenchymal-glomerular_mesenchymal_cell-Mesangial_Cell-mesangial_typical-aged\|Hypertensive_with+without-CKD / Celltypes from Cells and Nuclei per compartment and clinical group	GRM3 NTRK2 ROR1	5.51e-04	159	45	3	5ca96db4281abb5f646150ccf36adc66ab201c78
ToppCell	COVID-naiveBc-\|COVID / Condition, Cell_class and T cell subcluster	IGLV1-51 IGLV1-47 IGLV1-44	5.51e-04	159	45	3	4e6783b0f69c0c70150f9f3594881dc1bac7038a
ToppCell	356C-Fibroblasts-Fibroblast-D\|Fibroblasts / Donor, Lineage, Cell class and subclass (all cells)	CELA2B CLEC6A VSIG4	5.51e-04	159	45	3	0a3a363b30a8c741e1a3e2525725108d03c21776
ToppCell	frontal_cortex-Non-neuronal-leptomeningeal_cell-VLMC-VLMC_Spp1_Col15a1\|frontal_cortex / Per Region, Lineage, Cell class, Cell type, Cell subtype	VTN SVEP1 ROR1	5.51e-04	159	45	3	34c90711c5857cf6ada7b3acff99f1d48c7caf29
ToppCell	COVID-naiveBc\|COVID / Condition, Cell_class and T cell subcluster	IGLV1-51 IGLV1-47 IGLV1-44	5.51e-04	159	45	3	52cd36b4412f69a935b3f76da96c166a9481eb0c
ToppCell	renal_papilla_nuclei-Adult_normal_reference-Epithelial-Distal_tubule_epithelial_cell-kidney_loop_of_Henle_thick_ascending_limb_epithelial_cell-Cortical_Thick_Ascending_Limb_Cell\|Adult_normal_reference / Celltypes from Cells and Nuclei per compartment and clinical group	CELA2B TIA1 NTRK2	5.51e-04	159	45	3	c186bf05c61fac348cf41973827cced83fafd58a
ToppCell	PBMC-Severe-Myeloid-Neutrophil-immature_Neutrophil-Neu_0\|Severe / Location, Disease Group, Cell group, Cell class and sub_cluster (2021.03.09)	CEACAM8 CLEC6A CEACAM1	5.72e-04	161	45	3	f5da03c426f3124ea302bd343b6bca81cafee858
ToppCell	PBMC-Severe-Myeloid-Neutrophil-immature_Neutrophil-Neu_0\|Severe / Location, Disease Group, Cell group, Cell class and sub_cluster (2021.03.01)	CEACAM8 CLEC6A CEACAM1	5.82e-04	162	45	3	4e3bf16799c6552366d4c7e42b1328a05dcad7e7
ToppCell	droplet-Marrow-BM-30m-Lymphocytic-plasma_cell\|Marrow / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation	CLEC6A IFIT3 VSIG4	6.03e-04	164	45	3	758e85e2f5e7236b345e16c78344d5e0bf17d8dc
ToppCell	LV-11._Adipocyte\|World / Chamber and Cluster_Paper	CEACAM8 SVEP1 CEACAM1	6.25e-04	166	45	3	7e5852891714465c6228c9f955fd511ec79d0e02
ToppCell	3'-GW_trimst-1.5-LargeIntestine-Neuronal-Glial_immature-Differentiating_glia\|GW_trimst-1.5 / Celltypes from developing, pediatric, Crohn's, & adult GI tract	MINAR2 PLCH1 CADM2	6.36e-04	167	45	3	17c653b46507c8bb85da95836ae72a6015336142
ToppCell	3'_v3-Lung-Lymphocytic_B_plasma\|Lung / Manually curated celltypes from each tissue	IGLV1-47 IGLV1-44 IGLV1-36	6.58e-04	169	45	3	a65853ff9f6489cc1617cbba0d03b392d23c1528
ToppCell	BAL-Mild-Lymphocyte-B\|Mild / Location, Disease Group, Cell group, Cell class and sub_cluster (2021.03.01)	IGLV1-51 IGLV1-47 IGLV1-44	6.58e-04	169	45	3	307571e57c3bfdf15f0fe1a8b36585e8e4f8a207
ToppCell	5'-GW_trimst-1.5-SmallIntestine-Epithelial-mature_enterocytic-Paneth\|GW_trimst-1.5 / Celltypes from developing, pediatric, Crohn's, & adult GI tract	IGLV1-47 IGLV1-44 FOXA3	6.58e-04	169	45	3	a2f521f68681c0358448fa68329df764659ff52c
ToppCell	3'-Child04-06-SmallIntestine-Hematopoietic-Plasma_cells-IgG_plasma_cell\|Child04-06 / Celltypes from developing, pediatric, Crohn's, & adult GI tract	IGLV1-51 IGLV1-47 IGLV1-44	6.58e-04	169	45	3	0c2384f780ec25710ebb35c0b0df8f4afb53c9b1
ToppCell	facs-Diaphragm-Limb_Muscle-24m\|Diaphragm / Tongue_Heart_Limb_Muscle_Aorta_Diaphragm - method, tissue, subtissue, age, lineage, cell ontology and free annotation	CUBN PLCH1 DNAH5	6.58e-04	169	45	3	12bdc709bc000d7f9061ecd9fbd57233eaacb7e2
ToppCell	BAL-Mild-Lymphocyte-B-B_cell-B_cell-B_activate-7\|Mild / Location, Disease Group, Cell group, Cell class and sub_cluster (2021.03.01)	IGLV1-51 IGLV1-47 IGLV1-44	6.69e-04	170	45	3	ee2ee67d90ae4596de8ccd620e37c82cf51651d4
ToppCell	BAL-Mild-Lymphocyte-B-B_cell-B_cell\|Mild / Location, Disease Group, Cell group, Cell class and sub_cluster (2021.03.01)	IGLV1-51 IGLV1-47 IGLV1-44	6.69e-04	170	45	3	d7ca0c6ce5d2b7de99346f87e07aa7fe728fa08a
ToppCell	BAL-Mild-Lymphocyte-B-B_cell\|Mild / Location, Disease Group, Cell group, Cell class and sub_cluster (2021.03.01)	IGLV1-51 IGLV1-47 IGLV1-44	6.69e-04	170	45	3	52787f6d529c285d9f0c04cc022710ead5b89b3f
ToppCell	renal_cortex_nuclei-Hypertensive_with+without-CKD-Mesenchymal-glomerular_mesenchymal_cell\|Hypertensive_with+without-CKD / Celltypes from Cells and Nuclei per compartment and clinical group	GRM3 NTRK2 ROR1	6.69e-04	170	45	3	876b84740e15399bfff2b9c7f0b80fd759bbdb3f
ToppCell	renal_cortex_nuclei-Hypertensive_with+without-CKD-Mesenchymal-glomerular_mesenchymal_cell-Mesangial_Cell\|Hypertensive_with+without-CKD / Celltypes from Cells and Nuclei per compartment and clinical group	GRM3 NTRK2 ROR1	6.69e-04	170	45	3	1f8738acf439d893880db7e1fdc9b3615ca00c39
ToppCell	droplet-Kidney-nan-3m-Epithelial-brush_cell\|Kidney / Skin_Bladder_Kidney_Mammary_Gland - method, tissue, subtissue, age, lineage, cell ontology and free annotation	CUBN PLCH1 FAM83H	6.69e-04	170	45	3	dd48fd3c5c67eb71183981f42975a538f12077c3
ToppCell	droplet-Skin-nan-18m-Epithelial-keratinocyte_stem_cell\|Skin / Skin_Bladder_Kidney_Mammary_Gland - method, tissue, subtissue, age, lineage, cell ontology and free annotation	NCAM2 CSN1S1 SVEP1	6.69e-04	170	45	3	10e0912dd0beab5d0bbe2bd49e477b5962687925
ToppCell	3'-Adult-Distal_Rectal-Epithelial-mature_enterocytic-Colonocyte\|Adult / Celltypes from developing, pediatric, Crohn's, & adult GI tract	NTRK2 CA1 CEACAM1	6.81e-04	171	45	3	0597339618fb4d416d55c538eceb353218a55002
ToppCell	3'-Adult-Distal_Rectal-Epithelial-Tuft-related-BEST4+_epithelial\|Adult / Celltypes from developing, pediatric, Crohn's, & adult GI tract	CEACAM8 CA1 CEACAM1	6.81e-04	171	45	3	317b70d72a4ca5336cfb6a49dc57f8e2a8a1c736
ToppCell	3'-Adult-Distal_Rectal-Epithelial-mature_enterocytic\|Adult / Celltypes from developing, pediatric, Crohn's, & adult GI tract	NTRK2 CA1 CEACAM1	6.81e-04	171	45	3	0de81d12a8000f2c59cdb214e67dc526d18098fe
ToppCell	5'-Parenchyma_lung-Immune_Myeloid-Myeloid_macrophage-alveolar_macrophage-Alveolar_macrophages-Alveolar_macrophages_L.1.6.0.0\|5' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5	CLEC6A IFIT3 VSIG4	6.92e-04	172	45	3	c8ea80042faf923b08ff03d73100533d521d73ef
ToppCell	5'-Adult-Distal_Rectal-Hematopoietic-Plasma_cells-IgA_plasma_cell\|Adult / Celltypes from developing, pediatric, Crohn's, & adult GI tract	IGLV1-47 IGLV1-36 HMCES	7.04e-04	173	45	3	09cd878c33534bd476d6a4880f5582076189da8c
ToppCell	5'-Adult-Distal_Rectal-Hematopoietic-Plasma_cells\|Adult / Celltypes from developing, pediatric, Crohn's, & adult GI tract	IGLV1-47 IGLV1-36 HMCES	7.04e-04	173	45	3	62abaaaf48cabd1423f17fb27c33b75ea88867f4
ToppCell	3'-Broncho-tracheal-Immune_Lymphocytic-Lymphocytic_B-plasma_cell-Plasma_cells-Plasma_cells_L.1.7.0.0\|3' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5	IGLV1-47 IGLV1-44 IGLV1-36	7.04e-04	173	45	3	0ca2169a275404118038c0489a48062879488765
ToppCell	5'-Parenchyma_lung-Immune_Lymphocytic-Lymphocytic_B-plasma_cell-Plasma_cells-Plasma_cells_L.1.7.0.0\|5' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5	IGLV1-51 IGLV1-47 IGLV1-44	7.04e-04	173	45	3	7e6bfe85f60834f317941b70d6e0dc3bd527d293
ToppCell	facs-Diaphragm-Limb_Muscle-24m-Mesenchymal\|Diaphragm / Tongue_Heart_Limb_Muscle_Aorta_Diaphragm - method, tissue, subtissue, age, lineage, cell ontology and free annotation	CUBN PLCH1 DNAH5	7.04e-04	173	45	3	66f37c1437705734b20601656fa4aa1d92ca30be
ToppCell	facs-Diaphragm-Limb_Muscle-24m-Mesenchymal-nan\|Diaphragm / Tongue_Heart_Limb_Muscle_Aorta_Diaphragm - method, tissue, subtissue, age, lineage, cell ontology and free annotation	CUBN PLCH1 DNAH5	7.04e-04	173	45	3	649b08a409095592cccf31883be69c754411280d
ToppCell	10x5'-bone_marrow-Lymphocytic_B_plasma\|bone_marrow / Manually curated celltypes from each tissue	IGLV1-47 IGLV1-44 IGLV1-36	7.16e-04	174	45	3	b1931028cf80af5eff6da15d7f0196205f17926f
ToppCell	facs-Lung-Endomucin-24m-Myeloid-Myeloid_Dendritic_Type_1\|Lung / Lung_Trachea - method, tissue, subtissue, age, lineage, cell ontology and free annotation	CLEC6A PKD1L2 TG	7.16e-04	174	45	3	7565f6d1c743809807d248ab0e098a2474d9c5b9
ToppCell	10x5'-bone_marrow-Myeloid_Mac-Intermediate_macrophages\|bone_marrow / Manually curated celltypes from each tissue	CELA2B CLEC6A VSIG4	7.16e-04	174	45	3	268abfc4d53a3ba3931dbcafffef09a72ea0edfa
ToppCell	3'-Adult-Distal_Rectal-Epithelial-Tuft-related-Microfold_cell\|Adult / Celltypes from developing, pediatric, Crohn's, & adult GI tract	VTN NTRK2 CEACAM1	7.28e-04	175	45	3	8a37b2811f39bb9baa537e8755a29d559eb8185a
ToppCell	COVID-19-kidney-Distal_Epi_Doublet_(PCT)\|kidney / Disease (COVID-19 only), tissue and cell type	NR3C2 CUBN ROR1	7.40e-04	176	45	3	36f77d878a53b30465b0dea8333a3865dba75613
ToppCell	droplet-Heart-nan-3m\|Heart / Tongue_Heart_Limb_Muscle_Aorta_Diaphragm - method, tissue, subtissue, age, lineage, cell ontology and free annotation	NR3C2 HNRNPUL1 THRAP3	7.40e-04	176	45	3	749b47eac5436fa34e0d243ffbc6f1897f4e431e
ToppCell	LPS-IL1RA+antiTNF\|World / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2	PLOD2 SVEP1 ROR1	7.52e-04	177	45	3	b7fee75de7e96924af488a5baa2334711889ae7c
ToppCell	-IPF_03\|World / lung cells shred on cell class, cell subclass, sample id	IGLV1-51 IGLV1-47 IGLV1-44	7.52e-04	177	45	3	ae2d2e138946535596fa30a55207f261cafda461
ToppCell	Healthy-RBC\|World / disease group, cell group and cell class	CLEC6A CA1 VSIG4	7.52e-04	177	45	3	2ce41e37fa7139c7bd2b464bd86c5601dc501515
ToppCell	PBMC-Control-Lymphocyte-B-Plasmablast-Plasmablast-\|Control / Location, Disease Group, Cell group, Cell class and sub_cluster (2021.03.09)	IGLV1-47 IGLV1-44 IGLV1-36	7.52e-04	177	45	3	4c434a7b7cc54cf4dac996bbc3f5124d9ef9a9cd
ToppCell	(2)_Plasma_cells\|World / Lung cell shreds - cell class (v4) and cell subclass (v4)	IGLV1-51 IGLV1-47 IGLV1-44	7.52e-04	177	45	3	ed3c936bb69f9bc7291b4f6cde1d204078117c48
ToppCell	PBMC-Control-Lymphocyte-B-Plasmablast\|Control / Location, Disease Group, Cell group, Cell class (2021.03.09)	IGLV1-47 IGLV1-44 IGLV1-36	7.52e-04	177	45	3	fc40918825b7e1eb6861df59dfca944778a64b98
ToppCell	3'-Parenchyma_lung-Endothelial-Blood_vessel_EC-pulmonary_artery_endothelial_cell-EC_arterial-EC_arterial_L.2.4.1.3\|3' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5	N4BP2L1 CUBN TIA1	7.52e-04	177	45	3	16197068260fc062bf8b730a51a199887ea580b9
ToppCell	RV-11._Adipocyte\|World / Chamber and Cluster_Paper	CEACAM8 SVEP1 CEACAM1	7.52e-04	177	45	3	f0edf04930692418953e4f00a917257804ec0ffd
ToppCell	Severe-CD4+_T_activated\|Severe / Disease group and Cell class	NCAM2 IFIT3 CEACAM1	7.52e-04	177	45	3	a08f170f1143fcdd7d0842a54d9b807a4548f8b7
ToppCell	PND28-Immune-Immune_Myeloid-Monocytic-Macrophage-AM-AM_prolif\|PND28 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif	CLEC6A PKD1L2 VSIG4	7.52e-04	177	45	3	1d5a071157c755f3a27a5c3143015da04ee0b0dc
ToppCell	tumor_Lung-B_lymphocytes-MALT_B_cells\|tumor_Lung / Location, Cell class and cell subclass	IGLV1-51 IGLV1-47 IGLV1-44	7.52e-04	177	45	3	37e03f51925345f5f716ef3abe1d2c4ccf129020
ToppCell	PBMC-Control-Lymphocyte-B-Plasmablast-Plasmablast\|Control / Location, Disease Group, Cell group, Cell class (2021.03.09)	IGLV1-47 IGLV1-44 IGLV1-36	7.52e-04	177	45	3	d746122bf8d208c3aa4d156e8c12d0a0e555c6e5
ToppCell	PBMC_fresh-frozen-Mild-Moderate_convalescent_d36-51-Lymphocytic-Lymphocytic_B-Plasma_cell\|Mild-Moderate_convalescent_d36-51 / Compartment, severity and other cell annotations on 10x 3' data (130k)	IGLV1-47 IGLV1-44 SEC24A	7.65e-04	178	45	3	693f1135d9c5545945e80c7ba3d098afc0ccac29
ToppCell	PBMC_fresh-frozen-Mild-Moderate_convalescent_d36-51-Lymphocytic-Lymphocytic_B-Plasma_cell-B_c05-MZB1-XBP1\|Mild-Moderate_convalescent_d36-51 / Compartment, severity and other cell annotations on 10x 3' data (130k)	IGLV1-47 IGLV1-44 SEC24A	7.65e-04	178	45	3	6765c6970b1f2b719a20d2afd7471e1c262f3fc4
ToppCell	droplet-Fat-BAT+GAT+MAT-30m-Epithelial-nan\|Fat / Fat_BAT_GAT_MAT_SCAT - method, tissue, subtissue, age, lineage, cell ontology and free annotation	PLCH1 DNAH5 CADM2	7.65e-04	178	45	3	8b7df6ab8709d9ab9dff97677cc4561aec2745bc
ToppCell	droplet-Limb_Muscle-MUSCLE-30m\|Limb_Muscle / Tongue_Heart_Limb_Muscle_Aorta_Diaphragm - method, tissue, subtissue, age, lineage, cell ontology and free annotation	NR3C2 IFIT3 CEACAM1	7.65e-04	178	45	3	01dafd19de04eff459253eaa9a35debf8f3deedf
Disease	WNT1-inducible-signaling pathway protein 1 measurement	VTN TG	8.84e-05	10	42	2	EFO_0008321
Disease	Rolandic epilepsy	NR3C2 CADM2	2.34e-04	16	42	2	Orphanet_1945
Disease	temperament and character inventory	CADM2 TG	5.35e-04	24	42	2	EFO_0004825
Disease	1,5 anhydroglucitol measurement	NCAM2 PKD1L2	7.84e-04	29	42	2	EFO_0008009
Disease	internet addiction disorder	GRM3 NTRK2	1.02e-03	33	42	2	EFO_0803368
Disease	urinary albumin to creatinine ratio	NR3C2 HNRNPUL1 CUBN	2.12e-03	179	42	3	EFO_0007778

Protein segments in the cluster

Peptide	Gene	Start	Entry
DSYPQIQNNLWAGNA	ALX1	216	Q15699
PSQYSWSVNGTFQQY	CEACAM8	266	P31997
YFQSLNPYNNHRNPW	GRM3	336	Q14832
PNNSGQSWQRFYQLT	NR3C2	911	P08235
FPQNYYIQWLNGSLI	LMBR1	91	Q8WVP7
FQQLNQLAAYPYAVW	CSN1S1	136	P47710
SNIGSNYVYWYQQLP	IGLV1-47	46	P01700
SNIGNNYVSWYQQLP	IGLV1-51	46	P01701
NYPAAQHWQNLVYSQ	MINAR2	41	P59773
NNRGYKNQSQGYNQW	HNRNPU	791	Q00839
SNIGSNTVNWYQQLP	IGLV1-44	46	P01699
LLNYFGNYVPNSWTQ	PLOD2	261	O00469
NLCPTQGSYLWVQYQ	PKD1L2	236	Q7Z442
NYPHNSNYQWTVNVN	CUBN	1871	O60494
PWQVSLQYSSNGQWY	CELA2B	41	P08218
PAQYSWLINGTFQQS	CEACAM1	266	P13688
QWSKLYPIANGNNQS	CA1	16	P00915
SENLLPQNAPNYWYL	IFIT3	406	O14879
NTSLQWSNPAQQTLY	CADM2	51	Q8N3J6
ARWYNGTNNKNTPVY	GOT1	121	P17174
DQLYQQQYQWDPQLT	FAM83H	451	Q6ZRV2
YEWQRCQGTNQRQPY	HMCES	126	Q96FZ2
YITNNGTASIWNQPQ	DNAH5	411	Q8TE73
PSYNQYQQYAQQWNQ	HNRNPUL1	811	Q9BUJ2
QQWNQYYQNQGQWPP	HNRNPUL1	821	Q9BUJ2
PSQNWNQGYSNYWNQ	HNRNPD	286	Q14103
QYTYNNWSPPVQSNE	USP9X	2436	Q93008
SNIGNNAVNWYQQLP	IGLV1-36	46	A0A0B4J1U3
LNWQYNYPSTASQTN	SEC24A	136	O95486
FPYYRENQQRWQNSI	FOXA3	151	P55318
GNPVQYCLNQGQWTQ	SVEP1	1666	Q4LDE5
YFLGLSDPQGNNNWQ	CLEC6A	136	Q6EIG7
IFTYGKQPWYQLSNN	NTRK2	746	Q16620
YNNPQQWTEFQQEAS	ROR1	511	Q01973
NYRSNWQNYRQAYSP	THRAP3	106	Q9Y2W1
NQTIYYSWEGNPINI	NCAM2	406	O15394
ANPQLEWQYYQNKIL	REV1	461	Q9UBZ9
PPISYIWYKQQTNNQ	VSIG4	171	Q9Y279
PYWNAGCQLVALNYQ	PLCH1	671	Q4KWH8
PNLVESWYQILQNYQ	XPOT	181	O43592
QQQQPGFWTFSYYQS	YIPF2	71	Q9BWQ6
YLFWQILNGQLSQYP	TG	866	P01266
TNDYITWYQQFPSQG	TRAV4	46	A0A0B4J268
GKQYWEYQFQHQPSQ	VTN	276	P04004
QWYGNAQQIGQYMPN	TIA1	311	P31483
NNALPSNNARYWNSY	N4BP2L1	201	Q5TBK1