Cluster composition

Functions

CategoryNameIntersectionWithQueryPValueGenesInTermGenesInQueryGenesInTermInQueryID
GeneOntologyMolecularFunctionproteasome-activating activity

PSMC1 PSMC2

2.35e-046802GO:0036402
GeneOntologyMolecularFunctionribonucleoside triphosphate phosphatase activity

HBS1L PSMC1 PSMC2 MTREX DDX41 GFM1 ABCA7 RGS12 DDX3X DNAH11 RAD50

2.56e-047758011GO:0017111
GeneOntologyMolecularFunctionATP hydrolysis activity

PSMC1 PSMC2 MTREX DDX41 ABCA7 DDX3X DNAH11 RAD50

3.84e-04441808GO:0016887
GeneOntologyMolecularFunctionhelicase activity

MTREX DDX41 DDX3X HELLS RAD50

4.34e-04158805GO:0004386
GeneOntologyMolecularFunctionpyrophosphatase activity

HBS1L PSMC1 PSMC2 MTREX DDX41 GFM1 ABCA7 RGS12 DDX3X DNAH11 RAD50

5.01e-048398011GO:0016462
GeneOntologyMolecularFunctionhydrolase activity, acting on acid anhydrides

HBS1L PSMC1 PSMC2 MTREX DDX41 GFM1 ABCA7 RGS12 DDX3X DNAH11 RAD50

5.06e-048408011GO:0016817
GeneOntologyMolecularFunctionhydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides

HBS1L PSMC1 PSMC2 MTREX DDX41 GFM1 ABCA7 RGS12 DDX3X DNAH11 RAD50

5.06e-048408011GO:0016818
GeneOntologyMolecularFunctionATP-dependent activity

PSMC1 PSMC2 MTREX DDX41 ABCA7 DDX3X DNAH11 HELLS RAD50

7.70e-04614809GO:0140657
DomainRRM_1

SAFB RBM12 HNRNPM SAFB2 CSTF2 TRA2A CSTF2T HNRNPL

3.02e-06208808PF00076
DomainRRM

SAFB RBM12 HNRNPM SAFB2 CSTF2 TRA2A CSTF2T HNRNPL

4.13e-06217808SM00360
DomainRRM_dom

SAFB RBM12 HNRNPM SAFB2 CSTF2 TRA2A CSTF2T HNRNPL

5.75e-06227808IPR000504
DomainRRM

SAFB RBM12 HNRNPM SAFB2 CSTF2 TRA2A CSTF2T HNRNPL

6.33e-06230808PS50102
Domain-

SAFB RBM12 HNRNPM SAFB2 CSTF2 TRA2A CSTF2T HNRNPL

9.75e-062448083.30.70.330
DomainNucleotide-bd_a/b_plait

SAFB RBM12 HNRNPM SAFB2 CSTF2 TRA2A CSTF2T HNRNPL

1.46e-05258808IPR012677
Domain-

HBS1L YLPM1 PSMC1 PSMC2 DLG2 MTREX DDX41 GFM1 ABCA7 DDX3X DNAH11 HELLS RAD50

1.58e-0574680133.40.50.300
DomainCSTF2_hinge

CSTF2 CSTF2T

1.81e-052802IPR025742
DomainCSTF2_hinge

CSTF2 CSTF2T

1.81e-052802PF14327
DomainNR5_fam

NR5A2 NR5A1

1.81e-052802IPR016355
DomainCSTF_C

CSTF2 CSTF2T

1.81e-052802PF14304
DomainCSTF_C

CSTF2 CSTF2T

1.81e-052802IPR026896
DomainP-loop_NTPase

HBS1L YLPM1 PSMC1 PSMC2 DLG2 MTREX DDX41 GFM1 ABCA7 DDX3X DNAH11 HELLS RAD50

5.97e-058488013IPR027417
Domain26S_Psome_P45

PSMC1 PSMC2

2.69e-046802IPR005937
DomainRFX_DNA_binding

ARID2 RFX4

6.40e-049802PF02257
DomainDNA-bd_RFX

ARID2 RFX4

6.40e-049802IPR003150
DomainRFX_DBD

ARID2 RFX4

6.40e-049802PS51526
DomainHelicase_C

MTREX DDX41 DDX3X HELLS

1.15e-03107804PF00271
DomainHELICc

MTREX DDX41 DDX3X HELLS

1.15e-03107804SM00490
DomainHelicase_C

MTREX DDX41 DDX3X HELLS

1.19e-03108804IPR001650
DomainHELICASE_CTER

MTREX DDX41 DDX3X HELLS

1.23e-03109804PS51194
DomainHELICASE_ATP_BIND_1

MTREX DDX41 DDX3X HELLS

1.23e-03109804PS51192
DomainDEXDc

MTREX DDX41 DDX3X HELLS

1.23e-03109804SM00487
DomainHelicase_ATP-bd

MTREX DDX41 DDX3X HELLS

1.28e-03110804IPR014001
DomainG_TR_1

HBS1L GFM1

1.37e-0313802PS00301
DomainVitD_rcpt

NR5A2 NR5A1

1.59e-0314802IPR000324
Domain-

GATAD2A NR5A2 NR5A1

1.87e-03578033.30.50.10
DomainZnf_NHR/GATA

GATAD2A NR5A2 NR5A1

1.97e-0358803IPR013088
DomainEFTu-like_2

HBS1L GFM1

2.65e-0318802IPR004161
DomainGTP_EFTU_D2

HBS1L GFM1

2.65e-0318802PF03144
DomainG_TR_2

HBS1L GFM1

2.65e-0318802PS51722
DomainTF_GTP-bd_dom

HBS1L GFM1

2.96e-0319802IPR000795
DomainPDEase

PDE4A PDE4D

2.96e-0319802IPR023088
DomainAAA+_ATPase

PSMC1 PSMC2 ABCA7 DNAH11

3.41e-03144804IPR003593
DomainAAA

PSMC1 PSMC2 ABCA7 DNAH11

3.41e-03144804SM00382
DomainPDEase_I

PDE4A PDE4D

3.61e-0321802PF00233
DomainPDEASE_I

PDE4A PDE4D

3.61e-0321802PS00126
DomainPDEase_CS

PDE4A PDE4D

3.61e-0321802IPR023174
Domain-

SAFB SAFB2

3.61e-03218021.10.720.30
DomainDEAD/DEAH_box_helicase_dom

MTREX DDX41 DDX3X

3.79e-0373803IPR011545
DomainDEAD

MTREX DDX41 DDX3X

3.79e-0373803PF00270
Domain-

PDE4A PDE4D

3.96e-03228021.10.1300.10
DomainSAP

SAFB SAFB2

3.96e-0322802PF02037
DomainSAP

SAFB SAFB2

4.32e-0323802SM00513
DomainPDEase_catalytic_dom

PDE4A PDE4D

4.32e-0323802IPR002073
DomainHDc

PDE4A PDE4D

4.70e-0324802SM00471
DomainHD/PDEase_dom

PDE4A PDE4D

4.70e-0324802IPR003607
DomainSAP

SAFB SAFB2

5.10e-0325802PS50800
DomainSAP_dom

SAFB SAFB2

5.10e-0325802IPR003034
DomainTransl_B-barrel

HBS1L GFM1

5.93e-0327802IPR009000
DomainATPase_AAA_CS

PSMC1 PSMC2

6.82e-0329802IPR003960
DomainDEAD_ATP_HELICASE

DDX41 DDX3X

7.77e-0331802PS00039
Pubmed

Gain of Additional BIRC3 Protein Functions through 3'-UTR-Mediated Protein Complex Formation.

TRPM6 NCAPD3 HBS1L SAFB IARS1 HPRT1 ENAH HNRNPM SAFB2 PSMC1 TRA2A ZNF207 DLST EIF3A MTREX GRM1 DNAJC7 DDX41 GFM1 STAG2 DDX3X PDXK HNRNPL PCYOX1 HELLS RAD50

6.15e-171425802630948266
Pubmed

PRISMA and BioID disclose a motifs-based interactome of the intrinsically disordered transcription factor C/EBPα.

NCAPD3 ZNF609 SAFB RBM12 GATAD2A DOCK8 IARS1 ARID2 HPRT1 SAFB2 PSMC1 ZNF207 MTREX DDX41 MIDEAS STAG2 CSTF2T DDX3X HNRNPL HELLS RAD50

4.77e-141103802134189442
Pubmed

Synthetic Lethal and Resistance Interactions with BET Bromodomain Inhibitors in Triple-Negative Breast Cancer.

SAFB RBM12 GATAD2A CAPN2 YLPM1 SAFB2 CNDP2 CSTF2 TRA2A EIF3A MTREX DNAJC7 DDX41 STAG2 CSTF2T PDXK HELLS RAD50

1.29e-111014801832416067
Pubmed

Identifying biological pathways that underlie primordial short stature using network analysis.

SAFB GATAD2A IARS1 HPRT1 YLPM1 SAFB2 PSMC1 CSTF2 TRA2A EIF3A MTREX DNAJC7 DDX41 STAG2 DDX3X HNRNPL HELLS RAD50

1.52e-111024801824711643
Pubmed

Assembly of the U5 snRNP component PRPF8 is controlled by the HSP90/R2TP chaperones.

HBS1L GATAD2A IARS1 ARHGEF1 HPRT1 CAPN2 ENAH HNRNPM PSMC1 PSMC2 EIF3A MTREX DNAJC7 ELP3 DDX41 STAG2 DDX3X HNRNPL HELLS RAD50

4.65e-111415802028515276
Pubmed

H4K20me0 recognition by BRCA1-BARD1 directs homologous recombination to sister chromatids.

NCAPD3 ZNF609 SAFB GATAD2A ZSCAN30 YLPM1 HNRNPM SAFB2 CSTF2 TRA2A MTREX DDX41 MIDEAS STAG2 CASZ1 DDX3X HNRNPL HELLS RAD50

8.18e-111294801930804502
Pubmed

TRIM33 drives prostate tumor growth by stabilizing androgen receptor from Skp2-mediated degradation.

ZNF609 RBM12 ARID2 YLPM1 HNRNPM MTREX MIDEAS CASZ1 HNRNPL RAD50

9.35e-11220801035785414
Pubmed

Proteomic profiling of VCP substrates links VCP to K6-linked ubiquitylation and c-Myc function.

TGM2 HBS1L SAFB GATAD2A IARS1 ARHGEF1 CAPN2 HNRNPM SAFB2 PSMC1 PSMC2 DLST EIF3A MTREX ELP3 DDX41 MIDEAS HNRNPL RAD50

1.73e-101353801929467282
Pubmed

The Hsp70-Hsp90 co-chaperone Hop/Stip1 shifts the proteostatic balance from folding towards degradation.

IARS1 HNRNPM PSMC1 PSMC2 TRA2A EIF3A MTREX DNAJC7 DDX41 STAG2 DDX3X HNRNPL HELLS RAD50

2.10e-10638801433239621
Pubmed

Interactome analyses revealed that the U1 snRNP machinery overlaps extensively with the RNAP II machinery and contains multiple ALS/SMA-causative proteins.

ZNF609 SAFB ARID2 HNRNPM SAFB2 TRA2A MTREX DDX3X HNRNPL RAD50

2.57e-10244801029884807
Pubmed

Identification of SUMO Binding Proteins Enriched after Covalent Photo-Cross-Linking.

NCAPD3 SAFB IARS1 ARID2 HNRNPM SAFB2 PSMC1 STAG2 DDX3X HNRNPL RAD50

2.96e-10332801132786267
Pubmed

ZZW-115-dependent inhibition of NUPR1 nuclear translocation sensitizes cancer cells to genotoxic agents.

TGM2 SAFB YLPM1 HNRNPM SAFB2 CSTF2 TRA2A ZNF207 DLST EIF3A BAIAP2 MTREX DDX3X HNRNPL

3.27e-10660801432780723
Pubmed

The Nse5/6-like SIMC1-SLF2 complex localizes SMC5/6 to viral replication centers.

TCEA2 ZNF609 SAFB GATAD2A ARID2 YLPM1 HNRNPM SAFB2 CSTF2 ZNF207 DDX41 MIDEAS STAG2 DDX3X HNRNPL HELLS

4.74e-10954801636373674
Pubmed

MYC multimers shield stalled replication forks from RNA polymerase.

SAFB YLPM1 HNRNPM SAFB2 PSMC2 TRA2A ZNF207 EIF3A MTREX DNAJC7 DDX41 GFM1 MIDEAS DDX3X HNRNPL RAD50

7.96e-10989801636424410
Pubmed

BAP1 regulation of the key adaptor protein NCoR1 is critical for γ-globin gene repression.

TGM2 HBS1L SAFB GATAD2A IARS1 ARHGEF1 HPRT1 HNRNPM SAFB2 PSMC1 CNDP2 PSMC2 TRA2A EIF3A MTREX DDX41 DDX3X HNRNPL

8.87e-101318801830463901
Pubmed

Proteomic analysis of the cullin 4B interactome using proximity-dependent biotinylation in living cells.

SAFB DOCK8 SAFB2 CSTF2 TRA2A ZNF207 NR5A1 CSTF2T

2.59e-0915380828225217
Pubmed

Acetylation of ELF5 suppresses breast cancer progression by promoting its degradation and targeting CCND1.

HBS1L SAFB YLPM1 ENAH HNRNPM SAFB2 TRA2A MTREX ELP3 DDX41 DDX3X HNRNPL HELLS

3.19e-09653801333742100
Pubmed

C9orf72 protein quality control by UBR5-mediated heterotypic ubiquitin chains.

NCAPD3 GCAT IARS1 HPRT1 HNRNPM PSMC1 PSMC2 TRA2A UBAC2 DNAJC7 ELP3 DDX41 GFM1 DDX3X PDXK HNRNPL HELLS

3.25e-091257801737317656
Pubmed

A high-throughput approach for measuring temporal changes in the interactome.

TGM2 HBS1L PDE4D RBM12 IARS1 ARHGEF1 HPRT1 CAPN2 ENAH HNRNPM PSMC1 CNDP2 PSMC2 CSTF2 EIF3A DNAJC7 ELP3 DDX3X

4.19e-091455801822863883
Pubmed

Arginine methylation and ubiquitylation crosstalk controls DNA end-resection and homologous recombination repair.

SAFB IARS1 HPRT1 HNRNPM PSMC2 DLST EIF3A MTREX DNAJC7 DDX3X HNRNPL RAD50

5.03e-09551801234728620
Pubmed

A multi-factor trafficking site on the spliceosome remodeling enzyme BRR2 recruits C9ORF78 to regulate alternative splicing.

HBS1L GATAD2A CAPN2 ENAH PSMC1 PSMC2 DLST MTREX ELP3 GFM1 PCYOX1 RAD50

6.02e-09560801235241646
Pubmed

The HIV-1 Tat protein recruits a ubiquitin ligase to reorganize the 7SK snRNP for transcriptional activation.

PDE4A GATAD2A IARS1 HPRT1 ENAH HNRNPM PSMC1 PSMC2 CSTF2 TRA2A EIF3A MTREX DNAJC7 DDX41 DDX3X HNRNPL

7.05e-091153801629845934
Pubmed

Direct interaction between hnRNP-M and CDC5L/PLRG1 proteins affects alternative splice site choice.

DOCK8 ARHGEF1 YLPM1 ENAH HNRNPM PSMC1 PSMC2 MTREX DDX41 STAG2 HELLS RAD50

9.23e-09582801220467437
Pubmed

Poly(ADP-ribosyl)ation of BRD7 by PARP1 confers resistance to DNA-damaging chemotherapeutic agents.

NCAPD3 HBS1L GCAT IARS1 ARID2 HNRNPM ZNF207 EIF3A DNAJC7 DDX41 DDX3X

1.56e-08486801130940648
Pubmed

Physiological and pathophysiological characteristics of ataxin-3 isoforms.

IARS1 ENAH HNRNPM PSMC1 PSMC2 DLST EIF3A DNAJC7 HNRNPL

1.81e-0828180930455355
Pubmed

Molecular Characterization of the Oncogene BTF3 and Its Targets in Colorectal Cancer.

TGM2 PDE4A SAFB HNRNPM PSMC1 TRA2A ZNF207 DLST CASZ1 DDX3X HNRNPL RAD50

2.06e-08626801233644029
Pubmed

KCTD13-mediated ubiquitination and degradation of GluN1 regulates excitatory synaptic transmission and seizure susceptibility.

NEFH SAFB PDE4D DOCK8 IARS1 ARHGEF1 HNRNPM PSMC1 DLG2 DLST EIF3A BAIAP2 GRM1 ELP3 OPCML PDXK DNAH11

2.20e-081431801737142655
Pubmed

Targeting USP10 induces degradation of oncogenic ANLN in esophageal squamous cell carcinoma.

TGM2 SAFB GATAD2A IARS1 HNRNPM SAFB2 PSMC1 TRA2A DLST EIF3A BAIAP2 MTREX DDX41 DDX3X HNRNPL RAD50

2.36e-081257801636526897
Pubmed

Spatiotemporal-resolved protein networks profiling with photoactivation dependent proximity labeling.

SAFB RBM12 YLPM1 PSMC1 CSTF2 ZNF207 DNAJC7 CSTF2T PDXK HNRNPL

2.85e-08399801035987950
Pubmed

The mRNA-bound proteome and its global occupancy profile on protein-coding transcripts.

SAFB RBM12 YLPM1 HNRNPM SAFB2 CSTF2 TRA2A ZNF207 EIF3A DDX41 CSTF2T DDX3X HNRNPL

3.87e-08807801322681889
Pubmed

Complementary proteomics strategies capture an ataxin-1 interactome in Neuro-2a cells.

ZNF609 GATAD2A IARS1 ARHGEF1 PSMC1 PSMC2 CSTF2 DLST EIF3A DDX41 DDX3X HNRNPL

3.98e-08665801230457570
Pubmed

Cell cycle-dependent phosphorylation regulates RECQL4 pathway choice and ubiquitination in DNA double-strand break repair.

HBS1L GATAD2A IARS1 HPRT1 HNRNPM PSMC1 PSMC2 ZNF207 DLST EIF3A MTREX DNAJC7 ELP3 DDX3X HNRNPL RAD50

5.40e-081335801629229926
Pubmed

Combinatorial targeting of a chromatin complex comprising Dot1L, menin and the tyrosine kinase BAZ1B reveals a new therapeutic vulnerability of endocrine therapy-resistant breast cancer.

NCAPD3 SAFB GATAD2A IARS1 ARID2 HNRNPM SAFB2 TRA2A DLST EIF3A MTREX DDX3X HNRNPL

6.78e-08847801335850772
Pubmed

Mutual regulation between OGT and XIAP to control colon cancer cell growth and invasion.

HNRNPM PSMC1 CNDP2 PSMC2 ZNF207 DLST BAIAP2 DNAJC7 DDX41 DDX3X HNRNPL PCYOX1

7.39e-08704801232994395
Pubmed

Proteome-wide identification of HSP70/HSC70 chaperone clients in human cells.

TGM2 SAFB IARS1 CAPN2 YLPM1 HNRNPM PSMC1 ZNF207 DLST EIF3A BAIAP2 DNAJC7 DDX3X HNRNPL PCYOX1 RAD50

7.47e-081367801632687490
Pubmed

Identification of proximal SUMO-dependent interactors using SUMO-ID.

HBS1L ZNF609 SAFB RBM12 GATAD2A HNRNPM ZNF207 DDX3X CCDC102A HELLS

7.72e-08444801034795231
Pubmed

High-sensitivity profiling of SARS-CoV-2 noncoding region-host protein interactome reveals the potential regulatory role of negative-sense viral RNA.

HBS1L IARS1 HNRNPM PSMC2 ZNF207 EIF3A MTREX DDX41 DDX3X HNRNPL

1.28e-07469801037314180
Pubmed

Proteomic analysis of SRm160-containing complexes reveals a conserved association with cohesin.

SAFB HNRNPM PSMC1 CSTF2 STAG2 DDX3X HNRNPL

1.39e-0717080716159877
Pubmed

CHD3 and CHD4 form distinct NuRD complexes with different yet overlapping functionality.

SAFB GATAD2A IARS1 YLPM1 HNRNPM EIF3A MTREX DDX41 DDX3X HNRNPL HELLS

1.43e-07605801128977666
Pubmed

DNA damage shifts circadian clock time via Hausp-dependent Cry1 stabilization.

IARS1 HNRNPM PSMC1 PSMC2 DNAJC7 DDX3X HNRNPL

1.69e-0717580725756610
Pubmed

Ubiquilin 2 modulates ALS/FTD-linked FUS-RNA complex dynamics and stress granule formation.

SAFB IARS1 HNRNPM PSMC1 PSMC2 EIF3A DDX3X RAD50

2.07e-0726980830442662
Pubmed

mTORC1 activity regulates post-translational modifications of glycine decarboxylase to modulate glycine metabolism and tumorigenesis.

SAFB HNRNPM EIF3A MTREX DDX41 DDX3X HNRNPL RAD50

2.38e-0727480834244482
Pubmed

Systematic analysis of the protein interaction network for the human transcription machinery reveals the identity of the 7SK capping enzyme.

TCEA2 SAFB ARID2 ARHGEF1 CAPN2 HNRNPM MTREX HNRNPL HELLS

2.94e-0739080917643375
Pubmed

Maintenance of silent chromatin through replication requires SWI/SNF-like chromatin remodeler SMARCAD1.

ARID2 HNRNPM DDX3X HNRNPL HELLS RAD50

2.97e-0711680621549307
Pubmed

Proteomic characterization of chromosomal common fragile site (CFS)-associated proteins uncovers ATRX as a regulator of CFS stability.

SAFB HNRNPM SAFB2 PSMC1 CSTF2 DLST MTREX STAG2 DDX3X HNRNPL RAD50

3.00e-07652801131180492
Pubmed

Neuron-specific protein network mapping of autism risk genes identifies shared biological mechanisms and disease-relevant pathologies.

SAFB IARS1 HPRT1 CAPN2 ENAH HNRNPM PSMC1 CNDP2 PSMC2 DLG2 DLST BAIAP2 GFM1 PDXK

3.04e-071139801436417873
Pubmed

Wnt regulation: exploring Axin-Disheveled interactions and defining mechanisms by which the SCF E3 ubiquitin ligase is recruited to the destruction complex.

NCAPD3 IARS1 HPRT1 YLPM1 ENAH HNRNPM PSMC2 ZNF207 DLST EIF3A BAIAP2 HNRNPL

3.28e-07809801232129710
Pubmed

Defining the membrane proteome of NK cells.

NCAPD3 HBS1L DOCK8 IARS1 HNRNPM PSMC1 PSMC2 DLST EIF3A DNAJC7 DDX41 STAG2 HNRNPL RAD50

4.10e-071168801419946888
Pubmed

AIMP2-DX2 provides therapeutic interface to control KRAS-driven tumorigenesis.

SAFB IARS1 HPRT1 HNRNPM DNAJC7 DDX3X HNRNPL

4.17e-0720080735546148
Pubmed

Host E3 ligase HUWE1 attenuates the proapoptotic activity of the MERS-CoV accessory protein ORF3 by promoting its ubiquitin-dependent degradation.

IARS1 HNRNPM PSMC1 PSMC2 UBAC2 EIF3A DNAJC7 GFM1 DDX3X RAD50

4.21e-07534801035032548
Pubmed

NANOG-dependent function of TET1 and TET2 in establishment of pluripotency.

ZNF609 GATAD2A HNRNPM MTREX

4.37e-072780423395962
Pubmed

The interactome of CLUH reveals its association to SPAG5 and its co-translational proximity to mitochondrial proteins.

SAFB HNRNPM TRA2A DLST GFM1 METTL15 HNRNPL

4.61e-0720380735012549
Pubmed

SRCAP complex promotes lung cancer progression by reprograming the oncogenic transcription of Hippo-YAP/TAZ signaling pathway.

HBS1L ARID2 YLPM1 ENAH PSMC2 CSTF2 DNAJC7 MIDEAS CSTF2T RAD50

5.42e-07549801038280479
Pubmed

KSHV episome tethering sites on host chromosomes and regulation of latency-lytic switch by CHD4.

SAFB RBM12 HNRNPM SAFB2 HNRNPL HELLS

5.82e-0713080635545047
Pubmed

Anticancer sulfonamides target splicing by inducing RBM39 degradation via recruitment to DCAF15.

SAFB IARS1 HPRT1 HNRNPM SAFB2 PSMC1 TRA2A DLST EIF3A MTREX HNRNPL

7.33e-07714801128302793
Pubmed

Human transcription factor protein interaction networks.

ZNF609 RBM12 GATAD2A IARS1 ARID2 YLPM1 PSMC1 PSMC2 CSTF2 EIF3A DNAJC7 MIDEAS HNRNPL HELLS RAD50

8.03e-071429801535140242
Pubmed

Targeted and Interactome Proteomics Revealed the Role of PHD2 in Regulating BRD4 Proline Hydroxylation.

SAFB IARS1 SAFB2 PSMC2 TRA2A EIF3A DDX3X HNRNPL RAD50

8.18e-0744180931239290
Pubmed

Proteome-wide analysis of USP14 substrates revealed its role in hepatosteatosis via stabilization of FASN.

IARS1 HPRT1 HNRNPM PSMC1 PSMC2 DNAJC7 GFM1 DDX3X

1.06e-0633480830425250
Pubmed

MECP2 directly interacts with RNA polymerase II to modulate transcription in human neurons.

SAFB ARID2 YLPM1 HNRNPM SAFB2 CSTF2 TRA2A ZNF207 DLST DDX41 CSTF2T DDX3X HNRNPL

1.09e-061082801338697112
Pubmed

Large-scale mapping of human protein-protein interactions by mass spectrometry.

IARS1 HPRT1 HNRNPM PSMC1 PSMC2 EIF3A BAIAP2 BCAR3 MTREX DDX41 DDX3X HNRNPL HELLS RAD50

1.26e-061284801417353931
Pubmed

Proteomic identification of common SCF ubiquitin ligase FBXO6-interacting glycoproteins in three kinds of cells.

TGM2 GCAT IARS1 HNRNPM PSMC1 PSMC2 EIF3A DDX3X HNRNPL RAD50

1.46e-06613801022268729
Pubmed

N-Terminal Acetyltransferase Naa40p Whereabouts Put into N-Terminal Proteoform Perspective.

SAFB RBM12 ARID2 YLPM1 ENAH HNRNPM SAFB2 PSMC2 EIF3A DDX3X HELLS RAD50

1.48e-06934801233916271
Pubmed

WWP2 ubiquitylates RNA polymerase II for DNA-PK-dependent transcription arrest and repair at DNA breaks.

SAFB IARS1 HNRNPM TRA2A EIF3A BAIAP2 MTREX MIDEAS DDX3X HNRNPL

1.51e-06615801031048545
Pubmed

LMBR1L regulates lymphopoiesis through Wnt/β-catenin signaling.

NCAPD3 IARS1 ARHGEF1 CAPN2 HNRNPM PSMC1 PSMC2 CSTF2 UBAC2 DNAJC7 STAG2 HELLS

1.61e-06942801231073040
Pubmed

ALS/FTD-causing mutation in cyclin F causes the dysregulation of SFPQ.

GATAD2A HPRT1 HNRNPM PSMC1 PSMC2 CSTF2 MTREX DNAJC7 HNRNPL HELLS

1.72e-06624801033729478
Pubmed

UBE2O promotes lipid metabolic reprogramming and liver cancer progression by mediating HADHA ubiquitination.

TCEA2 IARS1 HPRT1 HNRNPM SAFB2 PSMC2 ZNF207 MTREX DDX41

1.98e-0649180936273042
Pubmed

DBIRD complex integrates alternative mRNA splicing with RNA polymerase II transcript elongation.

SAFB RBM12 HNRNPM HNRNPL RAD50

2.02e-068980522446626
Pubmed

A Compendium of RNA-Binding Proteins that Regulate MicroRNA Biogenesis.

SAFB IARS1 HNRNPM CSTF2 TRA2A DDX3X HNRNPL

2.06e-0625480728431233
Pubmed

Tumor suppressor BAP1 nuclear import is governed by transportin-1.

IARS1 HPRT1 ENAH HNRNPM PSMC1 PSMC2 CSTF2 EIF3A DNAJC7 DDX41 DDX3X HNRNPL RAD50

2.11e-061149801335446349
Pubmed

PPARγ Interaction with UBR5/ATMIN Promotes DNA Repair to Maintain Endothelial Homeostasis.

HNRNPM SAFB2 PSMC1 DNAJC7 RAD50

2.14e-069080530699358
Pubmed

TIF1γ inhibits lung adenocarcinoma EMT and metastasis by interacting with the TAF15/TBP complex.

IARS1 HNRNPM EIF3A MTREX DDX3X RAD50

3.75e-0617980636261009
Pubmed

ZF21 is a new regulator of focal adhesion disassembly and a potential member of the spreading initiation center.

CAPN2 HNRNPM PSMC1 DDX3X

3.93e-064680420890123
Pubmed

The human cytoplasmic dynein interactome reveals novel activators of motility.

HBS1L GCAT ENAH PSMC1 PSMC2 BAIAP2 DNAJC7 DDX41 RGS12 DDX3X RAD50

4.07e-06853801128718761
Pubmed

Histone-binding of DPF2 mediates its repressive role in myeloid differentiation.

GATAD2A HNRNPM CSTF2 EIF3A DDX41 CSTF2T DDX3X

4.20e-0628380728533407
Pubmed

Characterization of SARS-CoV-2 proteins reveals Orf6 pathogenicity, subcellular localization, host interactions and attenuation by Selinexor.

HNRNPM PSMC1 PSMC2 UBAC2 EIF3A DNAJC7 DDX3X HNRNPL

4.65e-0640880833766124
Pubmed

KAP1 facilitates reinstatement of heterochromatin after DNA replication.

NCAPD3 HPRT1 HNRNPM PSMC1 PSMC2 TRA2A MTREX DDX3X HNRNPL RAD50

4.99e-06704801029955894
Pubmed

A family of splice variants of CstF-64 expressed in vertebrate nervous systems.

CSTF2 CSTF2T

5.23e-06280219284619
Pubmed

Recognition of GU-rich polyadenylation regulatory elements by human CstF-64 protein.

CSTF2 CSTF2T

5.23e-06280212773396
Pubmed

Polyadenylation proteins CstF-64 and tauCstF-64 exhibit differential binding affinities for RNA polymers.

CSTF2 CSTF2T

5.23e-06280217029590
Pubmed

Scaffold attachment factors SAFB1 and SAFB2: Innocent bystanders or critical players in breast tumorigenesis?

SAFB SAFB2

5.23e-06280214587024
Pubmed

SAFB1 mediates repression of immune regulators and apoptotic genes in breast cancer cells.

SAFB SAFB2

5.23e-06280219901029
Pubmed

Genomic organization and isoforms of the mouse ELP gene.

NR5A1 ELP3

5.23e-0628028543574
Pubmed

Developmental distribution of the polyadenylation protein CstF-64 and the variant tauCstF-64 in mouse and rat testis.

CSTF2 CSTF2T

5.23e-06280214681198
Pubmed

Enantiomer-specific activities of an LRH-1 and SF-1 dual agonist.

NR5A2 NR5A1

5.23e-06280233335203
Pubmed

The crystal structures of human steroidogenic factor-1 and liver receptor homologue-1.

NR5A2 NR5A1

5.23e-06280215897460
Pubmed

A Long Non-coding RNA, lncLGR, Regulates Hepatic Glucokinase Expression and Glycogen Storage during Fasting.

GCK HNRNPL

5.23e-06280226904944
Pubmed

Scavenger receptors mediate the role of SUMO and Ftz-f1 in Drosophila steroidogenesis.

NR5A2 NR5A1

5.23e-06280223637637
Pubmed

Expression of LRH-1 and SF-1 in the mouse ovary: localization in different cell types correlates with differing function.

NR5A2 NR5A1

5.23e-06280212972182
Pubmed

Transcription of LIPE gene encoding hormone-sensitive lipase/cholesteryl esterase is regulated by SF-1 in human adrenocortical cells: involvement of protein kinase A signal transduction pathway.

LIPE NR5A1

5.23e-06280221081692
Pubmed

No germline mutations in supposed tumour suppressor genes SAFB1 and SAFB2 in familial breast cancer with linkage to 19p.

SAFB SAFB2

5.23e-06280219077293
Pubmed

Low SAFB levels are associated with worse outcome in breast cancer patients.

SAFB SAFB2

5.23e-06280219137425
Pubmed

A novel isoform of liver receptor homolog-1 is regulated by steroidogenic factor-1 and the specificity protein family in ovarian granulosa cells.

NR5A2 NR5A1

5.23e-06280223471216
Pubmed

Liver receptor homolog-1 and steroidogenic factor-1 have similar actions on rat granulosa cell steroidogenesis.

NR5A2 NR5A1

5.23e-06280217095585
Pubmed

Elevated levels of the 64-kDa cleavage stimulatory factor (CstF-64) in lipopolysaccharide-stimulated macrophages influence gene expression and induce alternative poly(A) site selection.

CSTF2 CSTF2T

5.23e-06280216207706
Pubmed

Differentiation of mesenchymal stem cells and embryonic stem cells into steroidogenic cells using steroidogenic factor-1 and liver receptor homolog-1.

NR5A2 NR5A1

5.23e-06280221129436
Pubmed

Liver receptor homologue-1 expression in ovarian epithelial and granulosa cell tumours.

NR5A2 NR5A1

5.23e-06280223537609
Pubmed

Liver receptor homologue-1 and steroidogenic factor-1 expression in cultured granulosa cells from patients with endometriosis: A preliminary study.

NR5A2 NR5A1

5.23e-06280226530052
Pubmed

LRH-1 May Rescue SF-1 Deficiency for Steroidogenesis: An in vitro and in vivo Study.

NR5A2 NR5A1

5.23e-06280225896302
Pubmed

Stimulation of p70S6 kinase via a growth hormone-controlled phosphatidylinositol 3-kinase pathway leads to the activation of a PDE4A cyclic AMP-specific phosphodiesterase in 3T3-F442A preadipocytes.

PDE4A PDE4D

5.23e-0628029520403
Pubmed

Unravelling the RNA-Binding Properties of SAFB Proteins in Breast Cancer Cells.

SAFB SAFB2

5.23e-06280226273616
InteractionCEBPA interactions

NCAPD3 ZNF609 SAFB RBM12 GATAD2A DOCK8 IARS1 ARID2 HPRT1 CAPN2 HNRNPM SAFB2 PSMC1 ZNF207 MTREX DDX41 MIDEAS STAG2 CSTF2T DDX3X HNRNPL HELLS RAD50

1.64e-1012457823int:CEBPA
InteractionCEBPB interactions

HBS1L GATAD2A IARS1 ARHGEF1 HPRT1 YLPM1 HNRNPM SAFB2 PSMC1 PSMC2 TRA2A ZNF207 DLST EIF3A MTREX DNAJC7 DDX41 GFM1 CSTF2T DDX3X HNRNPL HELLS RAD50

2.90e-0914437823int:CEBPB
InteractionEED interactions

NCAPD3 SAFB GATAD2A IARS1 CAPN2 YLPM1 HNRNPM SAFB2 PSMC1 CNDP2 PSMC2 TRA2A EIF3A MTREX DDX41 STAG2 CASZ1 DDX3X HNRNPL HELLS RAD50

8.33e-0814457821int:EED
InteractionBIRC3 interactions

SAFB IARS1 HPRT1 ENAH HNRNPM PSMC1 TRA2A ZNF207 DLST EIF3A MTREX DNAJC7 DDX41 GFM1 STAG2 DDX3X PDXK HNRNPL PCYOX1 RAD50

1.11e-0713347820int:BIRC3
InteractionATXN3 interactions

GCAT IARS1 CAPN2 ENAH HNRNPM PSMC1 PSMC2 UBAC2 DLST EIF3A DNAJC7 HNRNPL

1.16e-074397812int:ATXN3
InteractionAR interactions

ZNF609 RBM12 IARS1 ARID2 YLPM1 HNRNPM PSMC1 CNDP2 PSMC2 NR5A1 MTREX DNAJC7 MIDEAS CASZ1 DDX3X HNRNPL RAD50

1.87e-079927817int:AR
InteractionSMC5 interactions

TCEA2 ZNF609 SAFB GATAD2A ARID2 YLPM1 HNRNPM SAFB2 CSTF2 ZNF207 DDX41 MIDEAS STAG2 DDX3X HNRNPL HELLS RAD50

2.10e-0710007817int:SMC5
InteractionOBSL1 interactions

SAFB GATAD2A YLPM1 NR5A2 SAFB2 CSTF2 TRA2A EIF3A MTREX DNAJC7 DDX41 MIDEAS STAG2 DDX3X HNRNPL RAD50

2.88e-079027816int:OBSL1
InteractionNUPR1 interactions

TGM2 SAFB YLPM1 HNRNPM SAFB2 CSTF2 TRA2A ZNF207 DLST EIF3A BAIAP2 MTREX DDX3X HNRNPL

3.18e-076837814int:NUPR1
InteractionMIR98 interactions

SAFB IARS1 HNRNPM TRA2A DDX3X HNRNPL

5.69e-0778786int:MIR98
InteractionMIR199A1 interactions

SAFB IARS1 HNRNPM TRA2A DDX3X HNRNPL

8.84e-0784786int:MIR199A1
InteractionMEN1 interactions

NCAPD3 ZNF609 SAFB GATAD2A IARS1 ARID2 YLPM1 HNRNPM SAFB2 TRA2A DLST NR5A1 EIF3A MTREX DDX41 MIDEAS

1.65e-0610297816int:MEN1
InteractionMIRLET7A2 interactions

SAFB IARS1 HNRNPM TRA2A DDX3X HNRNPL

1.94e-0696786int:MIRLET7A2
InteractionMIR363 interactions

SAFB IARS1 HNRNPM TRA2A DDX3X HNRNPL

2.07e-0697786int:MIR363
InteractionDOT1L interactions

NCAPD3 SAFB GATAD2A IARS1 ARID2 HNRNPM SAFB2 TRA2A DLST NR5A1 EIF3A MTREX DDX3X HNRNPL

2.30e-068077814int:DOT1L
InteractionSNRPA interactions

SAFB YLPM1 HNRNPM SAFB2 CSTF2 TRA2A ZNF207 MTREX DDX41 DDX3X HNRNPL

2.40e-064827811int:SNRPA
InteractionMIR19A interactions

IARS1 HNRNPM CSTF2 TRA2A DDX3X HNRNPL

2.47e-06100786int:MIR19A
InteractionMIRLET7D interactions

SAFB IARS1 HNRNPM TRA2A DDX3X HNRNPL

2.62e-06101786int:MIRLET7D
InteractionMIRLET7A1 interactions

SAFB IARS1 HNRNPM TRA2A DDX3X HNRNPL

3.87e-06108786int:MIRLET7A1
InteractionAIM2 interactions

SAFB SAFB2 PSMC1 EIF3A MTREX RAD50

4.30e-06110786int:AIM2
InteractionC9orf78 interactions

HBS1L GATAD2A CAPN2 ENAH PSMC1 PSMC2 DLST MTREX ELP3 GFM1 PCYOX1 RAD50

4.40e-066207812int:C9orf78
InteractionNR2C2 interactions

TGM2 HBS1L SAFB GATAD2A IARS1 ARHGEF1 HPRT1 HNRNPM SAFB2 PSMC1 CNDP2 PSMC2 TRA2A EIF3A MTREX DDX41 DDX3X HNRNPL

5.08e-0614037818int:NR2C2
InteractionCPSF6 interactions

TCEA2 SAFB YLPM1 HNRNPM SAFB2 CSTF2 TRA2A MTREX CSTF2T DDX3X HNRNPL

5.53e-065267811int:CPSF6
InteractionSSU72 interactions

CAPN2 CSTF2 MIDEAS STAG2 HNRNPL

5.67e-0666785int:SSU72
InteractionBRD7 interactions

NCAPD3 HBS1L GCAT IARS1 ARID2 HNRNPM ZNF207 DLST EIF3A DNAJC7 DDX41 DDX3X

5.79e-066377812int:BRD7
InteractionSTIP1 interactions

DOCK8 IARS1 HNRNPM PSMC1 PSMC2 TRA2A EIF3A MTREX DNAJC7 DDX41 STAG2 DDX3X HNRNPL HELLS RAD50

6.10e-0610067815int:STIP1
InteractionFUS interactions

SAFB ADCK5 ARID2 HPRT1 YLPM1 HNRNPM SAFB2 CSTF2 TRA2A MTREX DNAJC7 DDX3X HNRNPL

6.19e-067577813int:FUS
InteractionMIR138-1 interactions

IARS1 HNRNPM TRA2A DDX3X HNRNPL

6.57e-0668785int:MIR138-1
InteractionMIR140 interactions

IARS1 HNRNPM TRA2A DDX3X HNRNPL

8.13e-0671785int:MIR140
InteractionMIR122 interactions

IARS1 HNRNPM TRA2A DDX3X HNRNPL

8.13e-0671785int:MIR122
InteractionMIR29B2 interactions

IARS1 HNRNPM TRA2A DDX3X HNRNPL

8.13e-0671785int:MIR29B2
InteractionC9orf72 interactions

NCAPD3 GCAT IARS1 HPRT1 HNRNPM PSMC1 PSMC2 TRA2A UBAC2 DNAJC7 ELP3 DDX41 GFM1 DDX3X PDXK HNRNPL HELLS

9.25e-0613197817int:C9orf72
InteractionMIR18A interactions

IARS1 HNRNPM TRA2A DDX3X HNRNPL

9.33e-0673785int:MIR18A
InteractionMIR20A interactions

IARS1 HNRNPM TRA2A DDX3X HNRNPL

9.97e-0674785int:MIR20A
InteractionMIR15A interactions

IARS1 HNRNPM TRA2A DDX3X HNRNPL

1.07e-0575785int:MIR15A
InteractionMIR7-3 interactions

IARS1 HNRNPM TRA2A DDX3X HNRNPL

1.14e-0576785int:MIR7-3
InteractionMIR16-1 interactions

IARS1 HNRNPM TRA2A DDX3X HNRNPL

1.14e-0576785int:MIR16-1
InteractionMIR199A2 interactions

IARS1 HNRNPM TRA2A DDX3X HNRNPL

1.14e-0576785int:MIR199A2
InteractionMIR92A1 interactions

IARS1 HNRNPM TRA2A DDX3X HNRNPL

1.29e-0578785int:MIR92A1
InteractionMIR451A interactions

IARS1 HNRNPM TRA2A DDX3X HNRNPL

1.29e-0578785int:MIR451A
InteractionMIR206 interactions

IARS1 HNRNPM TRA2A DDX3X HNRNPL

1.37e-0579785int:MIR206
InteractionMIR1-2 interactions

IARS1 HNRNPM TRA2A DDX3X HNRNPL

1.37e-0579785int:MIR1-2
InteractionMIR34C interactions

IARS1 HNRNPM TRA2A DDX3X HNRNPL

1.37e-0579785int:MIR34C
InteractionMIR143 interactions

IARS1 HNRNPM TRA2A DDX3X HNRNPL

1.46e-0580785int:MIR143
InteractionMIR145 interactions

IARS1 HNRNPM TRA2A DDX3X HNRNPL

1.55e-0581785int:MIR145
InteractionSUMO2 interactions

NCAPD3 SAFB IARS1 ARID2 HNRNPM SAFB2 PSMC1 STAG2 DDX3X HNRNPL RAD50

1.65e-055917811int:SUMO2
InteractionUSP14 interactions

IARS1 HPRT1 HNRNPM PSMC1 CNDP2 PSMC2 DNAJC7 GFM1 DDX3X HNRNPL

1.85e-054897810int:USP14
InteractionMIR31 interactions

IARS1 HNRNPM TRA2A DDX3X HNRNPL

1.85e-0584785int:MIR31
InteractionMIR7-2 interactions

IARS1 HNRNPM TRA2A DDX3X HNRNPL

1.85e-0584785int:MIR7-2
InteractionMIR200B interactions

IARS1 HNRNPM TRA2A DDX3X HNRNPL

1.85e-0584785int:MIR200B
InteractionKCTD13 interactions

NEFH PDE4D DOCK8 IARS1 ARHGEF1 CAPN2 HNRNPM PSMC1 DLG2 DLST EIF3A BAIAP2 GRM1 ELP3 OPCML PDXK DNAH11

1.90e-0513947817int:KCTD13
InteractionMIR107 interactions

IARS1 HNRNPM TRA2A DDX3X HNRNPL

1.96e-0585785int:MIR107
InteractionMIR17 interactions

IARS1 HNRNPM TRA2A DDX3X HNRNPL

1.96e-0585785int:MIR17
InteractionMIR93 interactions

IARS1 HNRNPM TRA2A DDX3X HNRNPL

1.96e-0585785int:MIR93
InteractionMIR9-1 interactions

IARS1 HNRNPM TRA2A DDX3X HNRNPL

1.96e-0585785int:MIR9-1
InteractionMIR16-2 interactions

IARS1 HNRNPM TRA2A DDX3X HNRNPL

1.96e-0585785int:MIR16-2
InteractionMIR20B interactions

IARS1 HNRNPM TRA2A DDX3X HNRNPL

2.08e-0586785int:MIR20B
InteractionCUL4B interactions

SAFB DOCK8 SAFB2 CNDP2 CSTF2 TRA2A ZNF207 NR5A1 CSTF2T DDX3X HELLS RAD50

2.20e-057287812int:CUL4B
InteractionCDC5L interactions

DOCK8 ARHGEF1 YLPM1 ENAH HNRNPM PSMC1 PSMC2 TRA2A MTREX DDX41 STAG2 HELLS RAD50

2.26e-058557813int:CDC5L
InteractionMIR138-2 interactions

IARS1 HNRNPM TRA2A DDX3X HNRNPL

2.33e-0588785int:MIR138-2
InteractionSOX2 interactions

ZNF609 PDE4D GATAD2A ARID2 HPRT1 CAPN2 YLPM1 HNRNPM PSMC2 DLST NR5A1 MTREX DDX41 MIDEAS STAG2 DDX3X HNRNPL

2.45e-0514227817int:SOX2
InteractionMIR29C interactions

IARS1 HNRNPM TRA2A DDX3X HNRNPL

2.46e-0589785int:MIR29C
InteractionMIR221 interactions

IARS1 HNRNPM TRA2A DDX3X HNRNPL

2.59e-0590785int:MIR221
InteractionMIR92A2 interactions

IARS1 HNRNPM CSTF2 DDX3X HNRNPL

2.59e-0590785int:MIR92A2
InteractionMIR1-1 interactions

IARS1 HNRNPM TRA2A DDX3X HNRNPL

2.59e-0590785int:MIR1-1
InteractionMIR200C interactions

IARS1 HNRNPM TRA2A DDX3X HNRNPL

2.74e-0591785int:MIR200C
InteractionWWOX interactions

IARS1 HPRT1 YLPM1 ENAH PSMC1 PSMC2 CSTF2 EIF3A BAIAP2 DNAJC7 HNRNPL

2.84e-056277811int:WWOX
InteractionMIR155 interactions

IARS1 HNRNPM TRA2A DDX3X HNRNPL

2.88e-0592785int:MIR155
InteractionMIR128-1 interactions

IARS1 HNRNPM TRA2A DDX3X HNRNPL

2.88e-0592785int:MIR128-1
InteractionMIR214 interactions

IARS1 HNRNPM TRA2A DDX3X HNRNPL

3.04e-0593785int:MIR214
InteractionMIR205 interactions

IARS1 HNRNPM TRA2A DDX3X HNRNPL

3.04e-0593785int:MIR205
InteractionMIRLET7F1 interactions

IARS1 HNRNPM TRA2A DDX3X HNRNPL

3.20e-0594785int:MIRLET7F1
InteractionCHD3 interactions

SAFB GATAD2A IARS1 YLPM1 HNRNPM CSTF2 EIF3A MTREX DDX41 STAG2 DDX3X HNRNPL

3.23e-057577812int:CHD3
InteractionGLDC interactions

SAFB HNRNPM EIF3A MTREX DDX41 DDX3X HNRNPL RAD50

3.38e-05321788int:GLDC
InteractionTOPORS interactions

WDR19 HNRNPM SAFB2 PSMC1 HNRNPL

3.54e-0596785int:TOPORS
InteractionMIRLET7C interactions

IARS1 HNRNPM TRA2A DDX3X HNRNPL

3.72e-0597785int:MIRLET7C
InteractionMIR21 interactions

IARS1 HNRNPM TRA2A DDX3X HNRNPL

3.72e-0597785int:MIR21
InteractionMIR106B interactions

IARS1 HNRNPM TRA2A DDX3X HNRNPL

3.91e-0598785int:MIR106B
InteractionMIR128-2 interactions

IARS1 HNRNPM TRA2A DDX3X HNRNPL

4.11e-0599785int:MIR128-2
InteractionRBM39 interactions

SAFB IARS1 HPRT1 YLPM1 HNRNPM SAFB2 PSMC1 TRA2A DLST EIF3A MTREX STAG2 DDX3X HNRNPL

4.13e-0510427814int:RBM39
InteractionEIF4G1 interactions

TGM2 YLPM1 HNRNPM PSMC1 PSMC2 DLST EIF3A MTREX DDX3X

4.41e-05433789int:EIF4G1
InteractionTDH interactions

GCAT HNRNPL

4.43e-053782int:TDH
InteractionMIRLET7B interactions

IARS1 HNRNPM TRA2A DDX3X HNRNPL

4.52e-05101785int:MIRLET7B
InteractionMIR25 interactions

IARS1 HNRNPM TRA2A DDX3X HNRNPL

4.52e-05101785int:MIR25
InteractionMIRLET7A3 interactions

IARS1 HNRNPM TRA2A DDX3X HNRNPL

4.74e-05102785int:MIRLET7A3
InteractionNLN interactions

NCAPD3 DLST FPGT ELP3

4.88e-0552784int:NLN
InteractionMIR15B interactions

IARS1 HNRNPM TRA2A DDX3X HNRNPL

4.97e-05103785int:MIR15B
InteractionMIR7-1 interactions

IARS1 HNRNPM TRA2A DDX3X HNRNPL

4.97e-05103785int:MIR7-1
InteractionSNRPC interactions

SAFB YLPM1 HNRNPM SAFB2 CSTF2 TRA2A ZNF207 DDX3X HNRNPL

5.00e-05440789int:SNRPC
InteractionMIR19B1 interactions

IARS1 HNRNPM TRA2A DDX3X HNRNPL

5.20e-05104785int:MIR19B1
InteractionMIR34A interactions

IARS1 HNRNPM TRA2A DDX3X HNRNPL

5.20e-05104785int:MIR34A
InteractionPRMT1 interactions

SAFB IARS1 HPRT1 YLPM1 HNRNPM PSMC2 DLST EIF3A MTREX DNAJC7 DDX3X HNRNPL RAD50

5.33e-059297813int:PRMT1
InteractionBTF3 interactions

TGM2 PDE4A SAFB HNRNPM PSMC1 TRA2A ZNF207 DLST CASZ1 DDX3X HNRNPL RAD50

5.44e-057997812int:BTF3
InteractionPML interactions

HBS1L ZNF609 SAFB RBM12 GATAD2A HNRNPM ZNF207 DLST EIF3A DDX3X CCDC102A HELLS RAD50

5.57e-059337813int:PML
InteractionMIRLET7E interactions

IARS1 HNRNPM TRA2A DDX3X HNRNPL

5.70e-05106785int:MIRLET7E
InteractionPINK1 interactions

TGM2 GATAD2A IARS1 ARHGEF1 HNRNPM EIF3A DNAJC7 DDX41 DDX3X HNRNPL PCYOX1

5.85e-056797811int:PINK1
InteractionHNRNPUL1 interactions

TGM2 SAFB HNRNPM SAFB2 ZNF207 GFM1 METTL15 DDX3X

6.35e-05351788int:HNRNPUL1
InteractionOGT interactions

HNRNPM PSMC1 CNDP2 PSMC2 ZNF207 DLST BAIAP2 DNAJC7 DDX41 DDX3X PDXK HNRNPL PCYOX1

6.69e-059507813int:OGT
InteractionMIR34B interactions

IARS1 HNRNPM TRA2A DDX3X HNRNPL

6.80e-05110785int:MIR34B
InteractionCLUH interactions

ARHGEF1 HNRNPM TRA2A DLST DNAJC7 GFM1 HNRNPL

7.14e-05263787int:CLUH
Cytoband19p13.3-p13.2

SAFB HNRNPM

2.69e-041480219p13.3-p13.2
Cytoband14q32.11

PSMC1 KCNK13

4.01e-041780214q32.11
Cytoband14q24.3

YLPM1 DLST MIDEAS

5.91e-049380314q24.3
Cytoband12q24

LHX5 RFX4

8.76e-042580212q24
Cytoband11q25

NCAPD3 OPCML

9.48e-042680211q25
CytobandEnsembl 112 genes in cytogenetic band chr11q25

NCAPD3 OPCML

1.35e-0331802chr11q25
CytobandEnsembl 112 genes in cytogenetic band chr19p13

PDE4A SAFB GATAD2A HNRNPM SAFB2 ABCA7

2.72e-03797806chr19p13
Cytoband19q13.2

CYP2B6 LIPE HNRNPL

3.01e-0316480319q13.2
Cytoband19q13.1

SLC7A9 CYP2S1

4.19e-035580219q13.1
GeneFamilyRNA binding motif containing

SAFB RBM12 HNRNPM SAFB2 CSTF2 TRA2A CSTF2T HNRNPL

6.37e-07213628725
CoexpressionGSE6674_PL2_3_VS_ANTI_IGM_AND_CPG_STIM_BCELL_UP

RBM12 HNRNPM PSMC1 PSMC2 ZNF207 DLST C8orf58

2.69e-06200807M6942
CoexpressionGARY_CD5_TARGETS_DN

HNRNPM CNDP2 PSMC2 CSTF2 ZNF207 FPGT DNAJC7 GFM1 CSTF2T

7.89e-06440809M13893
CoexpressionGSE10240_CTRL_VS_IL17_STIM_PRIMARY_BRONCHIAL_EPITHELIAL_CELLS_DN

LPIN1 NEFH TGM2 DOCK8 BAIAP2 RGS12

3.35e-05199806M298
CoexpressionGSE22025_TGFB1_VS_TGFB1_AND_PROGESTERONE_TREATED_CD4_TCELL_DN

ARHGEF1 NR5A2 EIF3A OPCML PDXK RAD50

3.35e-05199806M8388
CoexpressionGSE9006_TYPE_1_VS_TYPE_2_DIABETES_PBMC_AT_DX_UP

SAFB GATAD2A ARHGEF1 HNRNPM SAFB2 DNAJC7

3.44e-05200806M5797
CoexpressionGSE12845_NAIVE_VS_PRE_GC_TONSIL_BCELL_DN

HPRT1 HNRNPM PSMC1 PSMC2 DNAJC7 STAG2

3.44e-05200806M3199
CoexpressionGSE9006_HEALTHY_VS_TYPE_2_DIABETES_PBMC_AT_DX_UP

SAFB GATAD2A ARHGEF1 HNRNPM SAFB2 DNAJC7

3.44e-05200806M5781
CoexpressionGSE19825_IL2RALOW_VS_IL2RAHIGH_DAY3_EFF_CD8_TCELL_DN

GATAD2A GCAT HPRT1 PSMC2 CYP2S1 PCYOX1

3.44e-05200806M4302
CoexpressionDARWICHE_SKIN_TUMOR_PROMOTER_UP

HBS1L RBM12 CAPN2 ENAH BAIAP2

8.88e-05147805M1131
ToppCellfacs-BAT-Fat-3m|BAT / Fat_BAT_GAT_MAT_SCAT - method, tissue, subtissue, age, lineage, cell ontology and free annotation

CAPN2 ZNF207 MTREX STAG2 DDX3X HNRNPL

1.18e-061898067ce71f9c81512ed38c804f025908746b4af3aab1
ToppCellfacs-Thymus-nan-3m|Thymus / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation

PDE4D RBM12 ARHGEF1 ZNF207 DDX3X HNRNPL

1.37e-06194806f1661f9f2439fca5c1012c693b0744c4e3b90a9b
ToppCellfacs-Thymus-nan|Thymus / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation

PDE4D RBM12 ARHGEF1 ZNF207 DDX3X HNRNPL

1.37e-06194806cda1b197efb199330ea7ab25a7cee22cae22589d
ToppCelldroplet-Spleen-nan-3m-Lymphocytic-immature_NKT_cell|Spleen / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation

NEFH NCAPD3 GCAT RFX4 HELLS

1.78e-0517980554621d2b3a66e62aa76b7e444118878ed97c1e02
ToppCellrenal_medulla_nuclei-Hypertensive_with+without-CKD-Epithelial-Collecting_tubule_epithelial_cell-kidney_collecting_duct_principal_cell-Cortical_Collecting_Duct_Principal_Cell|Hypertensive_with+without-CKD / Celltypes from Cells and Nuclei per compartment and clinical group

PDE4D DLG2 KCNK13 BCAR3 HELLS

1.83e-05180805023ec0b080c8a5cd0f36e83c6b17d4be3c01edb5
ToppCellrenal_medulla_nuclei-Hypertensive_with+without-CKD-Epithelial-Collecting_tubule_epithelial_cell-kidney_connecting_tubule_epithelial_cell|Hypertensive_with+without-CKD / Celltypes from Cells and Nuclei per compartment and clinical group

TRPM6 TRABD2B PDE4D KCNK13 CASZ1

1.83e-05180805788d5fbf688365b5d92d3aa19b9f8e9448f8be5a
ToppCellrenal_papilla_nuclei-Adult_normal_reference-Epithelial-Collecting_tubule_epithelial_cell-kidney_collecting_duct_principal_cell-Outer_Medullary_Collecting_Duct_Principal_Cell|Adult_normal_reference / Celltypes from Cells and Nuclei per compartment and clinical group

TRABD2B PDE4D DLG2 LHX5 CASZ1

1.88e-05181805aa233b652921848af2257cc3687a7a09c3acfb67
ToppCellLPS-IL1RA|World / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2

GATAD2A SEMA6A EIF3A OPCML DDX3X

2.03e-05184805c066c2ec4f0f1d6eb183fca5c7bb0cd45c9950dc
ToppCellILEUM-inflamed-(1)_T_cell-(1)_CD8_Trm|(1)_T_cell / shred on tissue, inflammation_status, cell class(v3), cell subclass (v2)

LPIN1 PDE4D TRA2A DDX3X HNRNPL

2.03e-05184805cef3ee2a4a0af961aa3b4c92150d423e841ae8c1
ToppCellrenal_medulla_nuclei-Hypertensive_with+without-CKD-Epithelial-Collecting_tubule_epithelial_cell-kidney_collecting_duct_principal_cell-Outer_Medullary_Collecting_Duct_Principal_Cell|Hypertensive_with+without-CKD / Celltypes from Cells and Nuclei per compartment and clinical group

PDE4D DLG2 KCNK13 BCAR3 HELLS

2.20e-05187805e3095455d2f255854f339f6b05fa87852af0700f
ToppCellrenal_cortex_nuclei-Hypertensive_with+without-CKD-Epithelial-Collecting_tubule_epithelial_cell-kidney_collecting_duct_principal_cell-Cortical_Collecting_Duct_Principal_Cell|Hypertensive_with+without-CKD / Celltypes from Cells and Nuclei per compartment and clinical group

PDE4D KCNK13 BCAR3 CASZ1 HELLS

2.25e-05188805e30a4ddac0da8cdcf621d98e28e3895cd9307e7a
ToppCellrenal_medulla_nuclei-Hypertensive_with+without-CKD-Epithelial-Collecting_tubule_epithelial_cell-kidney_collecting_duct_principal_cell|Hypertensive_with+without-CKD / Celltypes from Cells and Nuclei per compartment and clinical group

PDE4D DLG2 KCNK13 BCAR3 HELLS

2.31e-051898053a295c215b5c18e7c673f92b7af5be523421682c
ToppCellrenal_cortex_nuclei-Hypertensive_with+without-CKD-Epithelial-Collecting_tubule_epithelial_cell-kidney_collecting_duct_principal_cell|Hypertensive_with+without-CKD / Celltypes from Cells and Nuclei per compartment and clinical group

PDE4D KCNK13 BCAR3 CASZ1 HELLS

2.37e-0519080511d3c31167ea71809b4cc3757a0c6ea54a448602
ToppCellfacs-Thymus-nan-3m-Lymphocytic|Thymus / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation

PDE4D ARHGEF1 ZNF207 DDX3X HNRNPL

2.62e-0519480566c056232ac216780acf4cc8ea325bd8ed1909c9
ToppCellfacs-Limb_Muscle-ForelimbandHindlimb-3m|Limb_Muscle / Tongue_Heart_Limb_Muscle_Aorta_Diaphragm - method, tissue, subtissue, age, lineage, cell ontology and free annotation

CAPN2 ZNF207 EIF3A DDX3X HNRNPL

2.75e-05196805151f1a29a91f8b234e9b6ed062666357a2f69128
DrugN-Acetyl-L-leucine [1188-21-2]; Up 200; 23uM; MCF7; HT_HG-U133A

WDR19 HBS1L NR5A2 TRA2A GRM1 RGS12 OPCML TULP1

5.01e-071998086462_UP
DrugAstemizole [68844-77-9]; Down 200; 8.8uM; HL60; HG-U133A

ZNF609 SAFB RBM12 GATAD2A YLPM1 MTREX HELLS

5.13e-061928071365_DN
Drugtestosterone enanthate

PDE4A PDE4D GCAT CAPN2 TRA2A NR5A1 DNAJC7 ABCA7 PDXK PCYOX1 RAD50

5.25e-065758011ctd:C004648
DrugNicergoline; Down 200; 8.2uM; PC3; HT_HG-U133A

ZNF609 SAFB RBM12 GATAD2A SAFB2 EIF3A ABCA7

5.88e-061968072058_DN
DrugNaltrexone hydrochloride dihydrate [16676-29-2]; Up 200; 9.6uM; MCF7; HT_HG-U133A

HBS1L BAIAP2 GRM1 ABCA7 RGS12 CSTF2T RAD50

6.08e-061978076241_UP
DrugIoversol [87771-40-2]; Up 200; 5uM; PC3; HT_HG-U133A

ZNF609 LIPE NR5A2 SAFB2 RGS12 CSTF2T DDX3X

6.08e-061978076726_UP
DrugGlimepiride [93479-97-1]; Up 200; 8.2uM; HL60; HT_HG-U133A

TGM2 CYP2B6 ZNF609 ABCA7 CASZ1 DDX3X PDXK

6.28e-061988072154_UP
DrugOzone

TRPM6 CYP2B6 PDE4A LIPE PDE4D HPRT1 NR5A2 PSMC1 PSMC2 DLST LHX5 GCK CYP2S1 BCAR3 STAG2 HELLS

7.52e-0612738016ctd:D010126
DrugRP 73401

CYP2B6 PDE4A PDE4D GRM1

1.06e-0539804CID000154575
Drug(4R)-4-(3-butoxy-4-methoxybenzyl)imidazolidin-2-one

PDE4A PDE4D

1.22e-052802DB06842
Drug4-[8-(3-nitrophenyl)-1,7-naphthyridin-6-yl]benzoic acid

PDE4A PDE4D

3.65e-053802DB08299
DrugAQ4N

CYP2B6 CYP2S1

3.65e-053802ctd:C094428
DrugGSK 8470

NR5A2 NR5A1

3.65e-053802ctd:C516216
Drugtamoxifen aziridine

SAFB SAFB2 DDX41

6.13e-0522803CID003033894
Drugestradiol; Down 200; 0.01uM; PC3; HT_HG-U133A

SLC7A9 HBS1L ZNF609 PDE4A ELP3 RGS12

6.49e-051958065910_DN
DrugPentamidine isethionate [140-64-7]; Down 200; 6.8uM; MCF7; HT_HG-U133A

TGM2 ZNF609 BAIAP2 ABCA7 CSTF2T RAD50

6.49e-051958064396_DN
DrugOxamniquine [21738-42-1]; Up 200; 14.4uM; MCF7; HT_HG-U133A

ZNF609 ARHGEF1 NR5A2 GRM1 ABCA7 DDX3X

6.49e-051958064124_UP
Drug1,1-dimethylbiguanide hydrochloride; Down 200; 10uM; MCF7; HG-U133A

WDR19 LPIN1 SAFB2 EIF3A STAG2 DDX3X

6.67e-051968062_DN
DrugHesperetin [520-33-2]; Up 200; 13.2uM; HL60; HG-U133A

SLC7A9 LPIN1 YLPM1 BAIAP2 CASZ1 OPCML

6.67e-051968062031_UP
DrugTrioxsalen [3902-71-4]; Up 200; 17.6uM; MCF7; HT_HG-U133A

TGM2 PDE4A CAPN2 SEMA6A RGS12 TULP1

7.06e-051988066078_UP
DrugHydrochlorothiazide [58-93-5]; Up 200; 13.4uM; PC3; HG-U133A

WDR19 YLPM1 EIF3A STAG2 RGS12 PDXK

7.06e-051988061906_UP
Drugnordihydroguaiaretic acid; Down 200; 1uM; ssMCF7; HG-U133A

TCEA2 ZNF609 RBM12 YLPM1 GRM1 PDXK

7.06e-05198806415_DN
DrugPiclamilast

PDE4A PDE4D

7.28e-054802DB01791
Drugbromfenacoum

NEFH HBS1L PDE4D RBM12 HPRT1 CNDP2 PSMC2 BAIAP2 GFM1 HNRNPL

8.47e-056448010ctd:C013418
Diseasematurity-onset diabetes of the young (implicated_via_orthology)

TGM2 GCK

3.14e-0410792DOID:0050524 (implicated_via_orthology)
Diseaseneuroticism measurement

ZNF609 DOCK8 HPRT1 YLPM1 ENAH DLST BAIAP2 SCGN METTL15

7.19e-04909799EFO_0007660
Diseasenervousness

YLPM1 DLST

8.29e-0416792NCIT_C74532
DiseaseDyslipidemias

NR5A2 DNAH11

1.88e-0324792C0242339
DiseaseDyslipoproteinemias

NR5A2 DNAH11

1.88e-0324792C0598784
Diseasechronotype measurement

SLC36A4 ARID2 PSMC2 SEMA6A NR5A1 RFX4 METTL15 PCYOX1

2.48e-03882798EFO_0008328
Diseaseneurotic disorder

PDE4D YLPM1 BAIAP2

2.55e-03101793EFO_0004257

Protein segments in the cluster

PeptideGeneStartEntry
GRQLEDFRSKRLMGM

ARHGEF1

151

Q92888
TMRDFGMGKRSVEER

CYP2B6

131

P20813
EEMRRNMGVSSGLEL

BCAR3

571

O75815
SRKMLDEGMMLEGFR

CASZ1

1421

Q86V15
GMLGEDVMRAVREHE

IQCD

81

Q96DY2
RDRFLKMRGMEILGN

ARID2

366

Q68CP9
DARVRFLGGRLAMML

DNAH11

56

Q96DT5
AREKRRMRLVVDGMG

ADCK5

71

Q3MIX3
RMRLVVDGMGRFGRS

ADCK5

76

Q3MIX3
MMGRRRAFAVDGRDG

C8orf58

1

Q8NAV2
DPRGIDARGMEARAM

CSTF2

406

P33240
DARGMEARAMEARGL

CSTF2

411

P33240
EARAMEVRGMEARGM

CSTF2

451

P33240
REKETRLRDTMRAMG

ABCA7

571

Q8IZY2
EDARLGMMRTGGTIK

RBM12

51

Q9NTZ6
VVMLKGDTALDMRGR

RAD50

1186

Q92878
MRAMKGEGSTAEVRE

RFX4

481

Q33E94
RMQKEMDRGLRLETH

GCK

36

P35557
TGEERERGVTMDVGM

HBS1L

316

Q9Y450
LRATEATAMAMGRGE

GATAD2A

61

Q86YP4
RLVDMMERGKIGLDF

DDX3X

326

O00571
GLERERKMLEKARMS

HELLS

41

Q9NRZ9
GMDRVGSEIERMGLV

HNRNPM

426

P52272
GSEIERMGLVMDRMG

HNRNPM

431

P52272
RMGQTMERIGSGVER

HNRNPM

471

P52272
ERMGANNLERMGLER

HNRNPM

556

P52272
LERMGLERMGANSLE

HNRNPM

576

P52272
TMLALRDLGMGKREG

CYP2S1

131

Q96SQ9
FEREEVGGRLATMMV

PCYOX1

66

Q9UHG3
QGDRERERGMEISPM

PDE4A

616

P27815
GDRERERGMEISPMC

PDE4D

646

Q08499
MECQLKRGSVDRMRG

LPIN1

116

Q14693
RRMRPLGGRLDESEM

LHX5

256

Q9H2C1
DTDGRRLSGEMISMK

KCNK13

336

Q9HB14
ARLASRMADDMLKRG

GCAT

356

O75600
RMADDMLKRGIFVIG

GCAT

361

O75600
ADRMIDMGFEGDIRT

DDX41

346

Q9UJV9
LRKDGPLDMRMDGGR

METTL15

186

A6NJ78
TERLARDVMKEMGGH

HPRT1

46

P00492
GLDGMRIENKGRMST

OPCML

266

Q14982
GKGLRSEHREKMNRM

DLST

216

P36957
AMGELYEREVREMRG

NEFH

141

P12036
EALLRGEGARGEMMR

DOCK8

1366

Q8NF50
RGMDDDRGPRRGMDD

EIF3A

1081

Q14152
RGMDDDRGPRRGMDD

EIF3A

1091

Q14152
MGDTGLRKRREDEKS

SLC7A9

1

P82251
GARSSMDRKMAELRG

CCDC102A

331

Q96A19
GFGMLLMEEAERIAR

ELP3

496

Q9H9T3
REREAPAMGSEEGMR

MIDEAS

421

Q6PJG2
GNRAATLMMLGRFRE

DNAJC7

66

Q99615
RRRSGAMVKMAAAGG

HNRNPL

26

P14866
ARRVMLEGDSEEMGV

DLG2

581

Q15700
GGRDSRAMETRAMET

CSTF2T

411

Q9H0L4
RGMEARGMDARGLEM

CSTF2T

446

Q9H0L4
GSGLMEEMSALLARR

ENAH

441

Q8N8S7
CEGMTVRGLLSAMRR

GRM1

291

Q13255
RRRQRKMGEDMHTIG

CAPN2

416

P17655
GAVMDSMELERQRGI

GFM1

86

Q96RP9
GRIRMKELAGMFLSE

SCGN

76

O76038
MRAVRRGLREGGAMA

FPGT

1

O14772
KALGMMGLVRRDTAL

LIPE

801

Q05469
MKLEAVRADRMRGGR

NR5A2

151

O00482
GEGARMVRELFEMAR

PSMC2

251

P35998
VGMRLEAVRADRMRG

NR5A1

76

Q13285
GVAQMSIRMGDIRRG

WDR19

816

Q8NEZ3
RMNRRRLKGENGMED

IARS1

736

P41252
EAGLMALRERRMKVT

PSMC1

401

P62191
AGSVVMERIRMDIRK

PDXK

211

O00764
SVDRREGSRSMMGER

SAFB

761

Q15424
SMAAGLERNGRMRVK

BAIAP2

366

Q9UQB8
GSGERCVMAMLRRRI

NCAPD3

536

P42695
EKRGEIRRMMEVAAA

CNDP2

36

Q96KP4
AEKEETGMAMRIRVG

TGM2

466

P21980
RCRLTRDKKGMDRGM

TULP1

306

O00294
FQERDGRMVAGKVLM

ZSCAN30

181

Q86W11
MIQVLSREEMDGGLR

TRPM6

1766

Q9BX84
SREEMDGGLRKAMRV

TRPM6

1771

Q9BX84
RDMGELIEGMRARAF

RGS12

391

O14924
RRGMDDRGIVILMVD

MTREX

526

P42285
DPEEDGMMKRRGRQG

STAG2

441

Q8N3U4
RMGKRVMALLRENED

TRABD2B

306

A6NFA1
GVEDKRIMGMQLDRA

SEMA6A

481

Q9H2E6
AMERANGMELDGRRI

TRA2A

176

Q13595
SDLEMRNGRGRGKRM

ZNF609

361

O15014
IDRREGSRPMMGDHR

SAFB2

781

Q14151
MMGRREDSREKMNRG

YLPM1

1061

P49750
GMEGIPEKDMDERRR

ZNF207

81

O43670
MMGKEEEIARIARRL

TCEA2

1

Q15560
ARLMEMGFSRGDALE

UBAC2

311

Q8NBM4
NRDMSVRGMEGSLER

ZNF438

611

Q7Z4V0
GAARREELDMDVMRP

SLC36A4

11

Q6YBV0