Cluster composition

Functions

Category	Name	IntersectionWithQuery	PValue	GenesInTerm	GenesInQuery	GenesInTermInQuery	ID
GeneOntologyMolecularFunction	transcription coregulator activity	BCL9L NCOR1 NCOA6 ARID1B KMT2D SNW1 TAF9B SMARCA4 BCL9 MIDEAS	1.69e-05	562	67	10	GO:0003712
GeneOntologyMolecularFunction	nuclear retinoic acid receptor binding	NCOR1 NCOA6 SNW1 PRAMEF20	3.47e-05	55	67	4	GO:0042974
GeneOntologyMolecularFunction	transcription coactivator activity	BCL9L NCOA6 ARID1B KMT2D SNW1 SMARCA4 BCL9	6.90e-05	303	67	7	GO:0003713
GeneOntologyMolecularFunction	RNA polymerase II-specific DNA-binding transcription factor binding	NCOR1 NCOA6 SNW1 PRAMEF20 SMARCA4 REST BHLHE40 MEF2C	7.51e-05	417	67	8	GO:0061629
GeneOntologyMolecularFunction	DNA-binding transcription factor binding	NCOR1 NCOA6 SNW1 PRAMEF20 SMARCA4 REST GRHL2 BHLHE40 MEF2C	1.35e-04	582	67	9	GO:0140297
GeneOntologyMolecularFunction	transcription factor binding	NCOR1 NCOA6 SNW1 ARID2 PRAMEF20 SMARCA4 REST GRHL2 BHLHE40 MEF2C	1.94e-04	753	67	10	GO:0008134
GeneOntologyMolecularFunction	nuclear receptor binding	NCOR1 NCOA6 SNW1 PRAMEF20 SMARCA4	4.12e-04	187	67	5	GO:0016922
GeneOntologyMolecularFunction	protein-macromolecule adaptor activity	BCL9L NCOR1 NCOA6 ARID1B KMT2D SNW1 TAF9B SYNE1 PRAMEF20 SMARCA4 BCL9 MIDEAS	4.29e-04	1160	67	12	GO:0030674
GeneOntologyMolecularFunction	transcription corepressor activity	NCOR1 SNW1 TAF9B SMARCA4 MIDEAS	1.03e-03	229	67	5	GO:0003714
GeneOntologyMolecularFunction	nuclear vitamin D receptor binding	NCOA6 SNW1	1.64e-03	18	67	2	GO:0042809
GeneOntologyMolecularFunction	molecular adaptor activity	BCL9L NCOR1 NCOA6 ARID1B KMT2D SNW1 TAF9B SYNE1 PRAMEF20 SMARCA4 BCL9 MIDEAS	1.68e-03	1356	67	12	GO:0060090
GeneOntologyMolecularFunction	peroxisome proliferator activated receptor binding	NCOR1 NCOA6	2.24e-03	21	67	2	GO:0042975
GeneOntologyMolecularFunction	nuclear retinoid X receptor binding	NCOR1 NCOA6	2.68e-03	23	67	2	GO:0046965
GeneOntologyMolecularFunction	chromatin binding	NCOR1 NCOA6 ARID1B SMARCA4 REST GRHL2 MEF2C WAC	3.22e-03	739	67	8	GO:0003682
GeneOntologyBiologicalProcess	myoblast differentiation	BCL9L ARID1B ARID2 SMARCA4 REST BCL9 MEF2C	2.90e-07	136	67	7	GO:0045445
GeneOntologyBiologicalProcess	DNA damage response	USP10 NCOA6 ARID1B SNW1 TAF9B WDR33 ARID2 SMARCA4 MCM7 MAEL SF3B5 WAC VCPIP1	1.07e-05	959	67	13	GO:0006974
GeneOntologyBiologicalProcess	positive regulation of myoblast differentiation	ARID1B ARID2 SMARCA4 MEF2C	2.85e-05	54	67	4	GO:0045663
GeneOntologyBiologicalProcess	regulation of nucleotide-excision repair	ARID1B ARID2 SMARCA4	1.13e-04	29	67	3	GO:2000819
GeneOntologyBiologicalProcess	stem cell population maintenance	BCL9L EIF4ENIF1 PRAMEF20 SMARCA4 REST BCL9	1.20e-04	237	67	6	GO:0019827
GeneOntologyBiologicalProcess	maintenance of cell number	BCL9L EIF4ENIF1 PRAMEF20 SMARCA4 REST BCL9	1.35e-04	242	67	6	GO:0098727
GeneOntologyCellularComponent	nuclear protein-containing complex	BCL9L NCOR1 NCOA6 ARID1B KMT2D SNW1 TAF9B WDR33 SYNE1 ARID2 NOL6 NXF3 SMARCA4 MCM7 BCL9 MIDEAS SF3B5 WAC	2.06e-07	1377	67	18	GO:0140513
GeneOntologyCellularComponent	chromatin	NCOR1 ARID1B SNW1 TAF9B ARID2 PRAMEF20 SMARCA4 MCM7 MAEL REST GRHL2 BHLHE40 FOXR2 MEF2C SF3B5	5.44e-05	1480	67	15	GO:0000785
GeneOntologyCellularComponent	SWI/SNF complex	ARID1B ARID2 SMARCA4	1.20e-04	30	67	3	GO:0016514
GeneOntologyCellularComponent	cytoplasmic ribonucleoprotein granule	DDX19A EIF4ENIF1 PRRC2C SYNE1 MAEL PATL1	2.22e-04	269	67	6	GO:0036464
GeneOntologyCellularComponent	ribonucleoprotein granule	DDX19A EIF4ENIF1 PRRC2C SYNE1 MAEL PATL1	3.14e-04	287	67	6	GO:0035770
GeneOntologyCellularComponent	bBAF complex	ARID1B SMARCA4	4.48e-04	10	67	2	GO:0140092
GeneOntologyCellularComponent	transcription regulator complex	BCL9L NCOR1 NCOA6 TAF9B ARID2 REST BCL9 MIDEAS	6.19e-04	596	67	8	GO:0005667
GeneOntologyCellularComponent	MLL3/4 complex	NCOA6 KMT2D	6.54e-04	12	67	2	GO:0044666
GeneOntologyCellularComponent	beta-catenin-TCF complex	BCL9L BCL9	7.72e-04	13	67	2	GO:1990907
GeneOntologyCellularComponent	npBAF complex	ARID1B SMARCA4	8.98e-04	14	67	2	GO:0071564
GeneOntologyCellularComponent	RSC-type complex	ARID2 SMARCA4	1.03e-03	15	67	2	GO:0016586
GeneOntologyCellularComponent	CCR4-NOT complex	CPEB3 PATL1	1.18e-03	16	67	2	GO:0030014
GeneOntologyCellularComponent	nBAF complex	ARID1B SMARCA4	1.18e-03	16	67	2	GO:0071565
HumanPheno	Papillary thyroid carcinoma	ARID1B ARID2 SRGAP1 SMARCA4 SEC23B	4.74e-08	24	23	5	HP:0002895
HumanPheno	Prominent eyelashes	ARID1B KMT2D ARID2 SMARCA4	7.23e-07	17	23	4	HP:0011231
HumanPheno	Thyroid carcinoma	ARID1B ARID2 SRGAP1 SMARCA4 SEC23B	4.23e-06	57	23	5	HP:0002890
HumanPheno	Hypoplastic fifth fingernail	ARID1B ARID2 SMARCA4	2.83e-05	14	23	3	HP:0008398
HumanPheno	Neoplasm of the thyroid gland	ARID1B ARID2 SRGAP1 SMARCA4 SEC23B	3.42e-05	87	23	5	HP:0100031
HumanPheno	Broad philtrum	ARID1B KMT2D ARID2 SMARCA4	4.16e-05	45	23	4	HP:0000289
HumanPheno	Oral aversion	ARID1B ARID2 SMARCA4	5.25e-05	17	23	3	HP:0012523
HumanPheno	Short phalanx of the 5th toe	ARID1B SMARCA4	5.84e-05	3	23	2	HP:0100368
HumanPheno	Hypoplastic fifth toenail	ARID1B ARID2 SMARCA4	7.43e-05	19	23	3	HP:0011937
HumanPheno	Aplasia/Hypoplasia of the 5th toe	ARID1B SMARCA4	1.16e-04	4	23	2	HP:0010343
HumanPheno	Abnormal thyroid morphology	ARID1B KMT2D ARID2 SRGAP1 SMARCA4 SEC23B	1.20e-04	183	23	6	HP:0011772
HumanPheno	Short 5th finger	ARID1B KMT2D ARID2 SMARCA4	1.68e-04	64	23	4	HP:0009237
HumanPheno	Aplasia/Hypoplasia of the 5th finger	ARID1B KMT2D ARID2 SMARCA4	1.89e-04	66	23	4	HP:0006262
HumanPheno	Aplasia/Hypoplasia of the phalanges of the 5th toe	ARID1B SMARCA4	1.93e-04	5	23	2	HP:0010383
HumanPheno	Abnormality of the phalanges of the 5th toe	ARID1B SMARCA4	1.93e-04	5	23	2	HP:0010342
HumanPheno	Hepatoblastoma	ARID1B ARID2 SMARCA4	2.45e-04	28	23	3	HP:0002884
HumanPheno	Wide nasal base	ARID1B ARID2 SMARCA4	2.45e-04	28	23	3	HP:0012810
HumanPheno	Prominent interphalangeal joints	ARID1B SMARCA4	2.89e-04	6	23	2	HP:0006237
HumanPheno	Abnormal nasal base norphology	ARID1B ARID2 SMARCA4	3.02e-04	30	23	3	HP:0012808
HumanPheno	Neoplasm of the gastrointestinal tract	FAH ARID1B ARID2 SMARCA4 DLEC1 REST SEC23B	3.22e-04	313	23	7	HP:0007378
HumanPheno	Neoplasm of the liver	FAH ARID1B ARID2 SMARCA4 REST	3.29e-04	140	23	5	HP:0002896
HumanPheno	Horseshoe kidney	ARID1B KMT2D ARID2 SMARCA4 REST	4.40e-04	149	23	5	HP:0000085
HumanPheno	Embryonal neoplasm	ARID1B ARID2 SMARCA4 REST	4.58e-04	83	23	4	HP:0002898
HumanPheno	Thick eyebrow	ARID1B ARID2 SMARCA4 MEF2C WAC	5.12e-04	154	23	5	HP:0000574
HumanPheno	Thin upper lip vermilion	ARID1B KMT2D ARID2 SMARCA4 MCM7 MEF2C WAC	5.25e-04	339	23	7	HP:0000219
HumanPheno	Thin lips	ARID1B KMT2D ARID2 SMARCA4 MCM7 MEF2C WAC	5.25e-04	339	23	7	HP:0000213
HumanPheno	Neoplasm of the endocrine system	ARID1B ARID2 SRGAP1 SMARCA4 SEC23B	5.28e-04	155	23	5	HP:0100568
HumanPheno	Abnormal localization of kidney	ARID1B KMT2D ARID2 SMARCA4 REST WAC	5.39e-04	241	23	6	HP:0100542
HumanPheno	Thick nasal alae	ARID1B ARID2 SMARCA4	6.61e-04	39	23	3	HP:0009928
HumanPheno	Ectopic kidney	ARID1B KMT2D REST WAC	7.07e-04	93	23	4	HP:0000086
HumanPheno	Aspiration pneumonia	ARID1B KMT2D ARID2 SMARCA4	7.66e-04	95	23	4	HP:0011951
MousePheno	dilated third ventricle	NCOR1 NCOA6 DSCAM CFAP43	5.72e-06	34	49	4	MP:0000827
Domain	BCL9_beta-catenin-bd_dom	BCL9L BCL9	1.27e-05	2	67	2	IPR024670
Domain	BCL9	BCL9L BCL9	1.27e-05	2	67	2	PF11502
Domain	Bcl-9	BCL9L BCL9	1.27e-05	2	67	2	IPR015668
Domain	-	ARID1B ARID2	1.29e-03	15	67	2	1.10.150.60
Domain	BRIGHT	ARID1B ARID2	1.29e-03	15	67	2	SM00501
Domain	ARID_dom	ARID1B ARID2	1.29e-03	15	67	2	IPR001606
Domain	ARID	ARID1B ARID2	1.29e-03	15	67	2	PS51011
Domain	ARID	ARID1B ARID2	1.29e-03	15	67	2	PF01388
Domain	SANT_dom	NCOR1 MIDEAS	3.90e-03	26	67	2	IPR017884
Domain	SANT	NCOR1 MIDEAS	4.51e-03	28	67	2	PS51293
Domain	Myb_DNA-binding	NCOR1 MIDEAS	6.99e-03	35	67	2	PF00249
Domain	MYB_LIKE	NCOR1 MIDEAS	8.20e-03	38	67	2	PS50090
Pathway	REACTOME_FORMATION_OF_THE_BETA_CATENIN_TCF_TRANSACTIVATING_COMPLEX	BCL9L KMT2D SMARCA4 BCL9	1.98e-06	26	50	4	MM14793
Pathway	BIOCARTA_VDR_PATHWAY	NCOR1 SNW1 SMARCA4	6.17e-05	22	50	3	MM1370
Pathway	REACTOME_CIRCADIAN_CLOCK	NCOR1 NCOA6 BHLHE40 MEF2C	1.08e-04	70	50	4	M938
Pathway	WP_KLEEFSTRA_SYNDROME	NCOA6 ARID1B SMARCA4	1.44e-04	29	50	3	M48076
Pathway	REACTOME_FORMATION_OF_THE_BETA_CATENIN_TCF_TRANSACTIVATING_COMPLEX	BCL9L KMT2D SMARCA4 BCL9	2.98e-04	91	50	4	M27101
Pathway	REACTOME_RUNX1_INTERACTS_WITH_CO_FACTORS_WHOSE_PRECISE_EFFECT_ON_RUNX1_TARGETS_IS_NOT_KNOWN	ARID1B ARID2 SMARCA4	3.00e-04	37	50	3	M27797
Pathway	REACTOME_CHROMATIN_MODIFYING_ENZYMES	NCOR1 ARID1B KMT2D ARID2 SMARCA4 REST	3.81e-04	272	50	6	M29619
Pathway	REACTOME_DEACTIVATION_OF_THE_BETA_CATENIN_TRANSACTIVATING_COMPLEX	BCL9L KMT2D BCL9	4.37e-04	42	50	3	M27272
Pathway	WP_MECP2_AND_ASSOCIATED_RETT_SYNDROME	NCOR1 REST MEF2C	5.72e-04	46	50	3	MM15949
Pathway	WP_RETT_SYNDROME	NCOR1 SMARCA4 MEF2C	6.49e-04	48	50	3	M39759
Pathway	REACTOME_HEME_SIGNALING	NCOR1 NCOA6 MEF2C	6.90e-04	49	50	3	M41832
Pathway	REACTOME_TRANSCRIPTIONAL_ACTIVATION_OF_MITOCHONDRIAL_BIOGENESIS	NCOR1 NCOA6 MEF2C	9.67e-04	55	50	3	M27145
Pubmed	SRCAP complex promotes lung cancer progression by reprograming the oncogenic transcription of Hippo-YAP/TAZ signaling pathway.	NCOR1 USP10 NCOA6 ARID1B KMT2D SNW1 TAF9B WDR33 PRRC2C ARID2 SMARCA4 MCM7 DIAPH3 MIDEAS RSBN1L VCPIP1	6.41e-15	549	67	16	38280479
Pubmed	Proximity-dependent Mapping of the Androgen Receptor Identifies Kruppel-like Factor 4 as a Functional Partner.	BCL9L NCOR1 NCOA6 ARID1B KMT2D TAF9B WDR33 SMARCA4 BCL9 MIDEAS GRHL2 WAC	1.41e-13	268	67	12	33640491
Pubmed	Identification of the SOX2 Interactome by BioID Reveals EP300 as a Mediator of SOX2-dependent Squamous Differentiation and Lung Squamous Cell Carcinoma Growth.	NCOR1 NCOA6 ZNF536 ARID1B KMT2D SMARCA4 BCL9 MIDEAS	4.33e-12	83	67	8	28794006
Pubmed	Menin and Menin-Associated Proteins Coregulate Cancer Energy Metabolism.	NCOR1 NCOA6 ARID1B KMT2D WDR33 NOL6 MIDEAS GRHL2 RSBN1L SF3B5 WAC	5.40e-11	341	67	11	32971831
Pubmed	Human transcription factor protein interaction networks.	BCL9L NCOR1 NCOA6 ZNF536 ARID1B KMT2D SNW1 EIF4ENIF1 TAF9B WDR33 PRRC2C ARID2 SMARCA4 PATL1 BCL9 MIDEAS MEF2C SEC23B	1.38e-10	1429	67	18	35140242
Pubmed	Comparative Application of BioID and TurboID for Protein-Proximity Biotinylation.	BCL9L NCOR1 DDX19A NCOA6 ARID1B KMT2D EIF4ENIF1 WDR33 PRRC2C BCL9 MIDEAS	1.19e-09	457	67	11	32344865
Pubmed	Interaction network of human early embryonic transcription factors.	BCL9L NCOR1 NCOA6 ZNF536 ARID1B KMT2D ARID2 SMARCA4 BCL9 MIDEAS	1.44e-09	351	67	10	38297188
Pubmed	The Nse5/6-like SIMC1-SLF2 complex localizes SMC5/6 to viral replication centers.	NCOR1 NCOA6 ARID1B SNW1 TAF9B WDR33 PRRC2C ARID2 NOL6 SMARCA4 MIDEAS RSBN1L SF3B5 WAC	3.15e-09	954	67	14	36373674
Pubmed	Agonist-specific Protein Interactomes of Glucocorticoid and Androgen Receptor as Revealed by Proximity Mapping.	NCOR1 DDX19A NCOA6 ARID1B KMT2D SMARCA4	9.36e-09	78	67	6	28611094
Pubmed	TRIM33 drives prostate tumor growth by stabilizing androgen receptor from Skp2-mediated degradation.	NCOR1 ARID1B KMT2D SNW1 ARID2 MCM7 MIDEAS GRHL2	1.07e-08	220	67	8	35785414
Pubmed	Cardiomyocyte proliferation is suppressed by ARID1A-mediated YAP inhibition during cardiac maturation.	ARID1B ARID2 SMARCA4 MEF2C	1.30e-07	24	67	4	37543677
Pubmed	REST repression of neuronal genes requires components of the hSWI.SNF complex.	ARID1B ARID2 SMARCA4 REST	2.49e-07	28	67	4	12192000
Pubmed	TNF-α inhibits glucocorticoid receptor-induced gene expression by reshaping the GR nuclear cofactor profile.	NCOR1 NCOA6 ZNF536 ARID1B KMT2D PDE6A ARID2 NOL6 DNAH2 BCL9	3.90e-07	638	67	10	31182584
Pubmed	Coffin-Siris Syndrome	ARID1B ARID2 SMARCA4	5.69e-07	9	67	3	23556151
Pubmed	The Epigenetic Factor Landscape of Developing Neocortex Is Regulated by Transcription Factors Pax6→ Tbr2→ Tbr1.	NCOA6 ARID1B KMT2D ARID2 SMARCA4 REST	6.11e-07	157	67	6	30186101
Pubmed	ARID1a-DNA interactions are required for promoter occupancy by SWI/SNF.	ARID1B ARID2 SMARCA4	8.12e-07	10	67	3	23129809
Pubmed	H4K20me0 recognition by BRCA1-BARD1 directs homologous recombination to sister chromatids.	NCOR1 NCOA6 KMT2D SNW1 TAF9B WDR33 SMARCA4 REST MIDEAS BHLHE40 SF3B5 WAC VCPIP1	9.65e-07	1294	67	13	30804502
Pubmed	PRISMA and BioID disclose a motifs-based interactome of the intrinsically disordered transcription factor C/EBPα.	NCOR1 NCOA6 ARID1B KMT2D SNW1 PRRC2C ARID2 SMARCA4 MCM7 BCL9 MIDEAS WAC	1.17e-06	1103	67	12	34189442
Pubmed	Proteome-scale mapping of binding sites in the unstructured regions of the human proteome.	NCOR1 NCOA6 ASAP2 EIF4ENIF1 ARID2 INAVA BCL9 APOBR	1.76e-06	430	67	8	35044719
Pubmed	Spatiotemporal profile of postsynaptic interactomes integrates components of complex brain disorders.	NCOR1 USP10 SNW1 DSCAM PRRC2C SYNE1 KIAA1217 SMARCA4 BCL9 GOLGA1 TRIM3	2.16e-06	963	67	11	28671696
Pubmed	Dynamic Protein Interactions of the Polycomb Repressive Complex 2 during Differentiation of Pluripotent Cells.	BCL9L KMT2D SNW1 PRRC2C NOL6 SMARCA4 MCM7 REST	3.35e-06	469	67	8	27634302
Pubmed	BRG1 chromatin remodeling activity is required for efficient chromatin binding by repressor element 1-silencing transcription factor (REST) and facilitates REST-mediated repression.	SMARCA4 REST	3.66e-06	2	67	2	17023429
Pubmed	SMARCA4 controls state plasticity in small cell lung cancer through regulation of neuroendocrine transcription factors and REST splicing.	SMARCA4 REST	3.66e-06	2	67	2	39080761
Pubmed	Bcl9/Bcl9l are critical for Wnt-mediated regulation of stem cell traits in colon epithelium and adenocarcinomas.	BCL9L BCL9	3.66e-06	2	67	2	20682801
Pubmed	The ATPase BRG1/SMARCA4 is a protein interaction platform that recruits BAF subunits and the transcriptional repressor REST/NRSF in neural progenitor cells.	SMARCA4 REST	3.66e-06	2	67	2	31428904
Pubmed	Targeting BCL9/BCL9L enhances antigen presentation by promoting conventional type 1 dendritic cell (cDC1) activation and tumor infiltration.	BCL9L BCL9	3.66e-06	2	67	2	38811552
Pubmed	BCL9/BCL9L promotes tumorigenicity through immune-dependent and independent mechanisms in triple negative breast cancer.	BCL9L BCL9	3.66e-06	2	67	2	33767438
Pubmed	Essential role of BCL9-2 in the switch between beta-catenin's adhesive and transcriptional functions.	BCL9L BCL9	3.66e-06	2	67	2	15371335
Pubmed	Autism-Associated Chromatin Regulator Brg1/SmarcA4 Is Required for Synapse Development and Myocyte Enhancer Factor 2-Mediated Synapse Remodeling.	SMARCA4 MEF2C	3.66e-06	2	67	2	26459759
Pubmed	An improved smaller biotin ligase for BioID proximity labeling.	NCOR1 NCOA6 ARID1B EIF4ENIF1 PRRC2C	4.13e-06	123	67	5	26912792
Pubmed	The human SWI/SNF-B chromatin-remodeling complex is related to yeast rsc and localizes at kinetochores of mitotic chromosomes.	ARID1B ARID2 SMARCA4	4.56e-06	17	67	3	11078522
Pubmed	BioID identifies novel c-MYC interacting partners in cultured cells and xenograft tumors.	ARID1B SNW1 TAF9B SMARCA4 WAC	6.28e-06	134	67	5	25452129
Pubmed	Reciprocal regulation of CD4/CD8 expression by SWI/SNF-like BAF complexes.	ARID1B ARID2 SMARCA4	6.48e-06	19	67	3	12110891
Pubmed	Loss of BAF (mSWI/SNF) Complexes Causes Global Transcriptional and Chromatin State Changes in Forebrain Development.	ARID1B ARID2 SMARCA4 MEF2C	7.79e-06	65	67	4	26655900
Pubmed	A direct physical interaction between Nanog and Sox2 regulates embryonic stem cell self-renewal.	NCOR1 WDR33 KIAA1217 MIDEAS GRHL2	9.53e-06	146	67	5	23892456
Pubmed	The PHLPP1 N-Terminal Extension Is a Mitotic Cdk1 Substrate and Controls an Interactome Switch.	USP10 SNW1 EIF4ENIF1 PRRC2C DIAPH3 VCPIP1	1.03e-05	256	67	6	33397691
Pubmed	Coffin-Siris syndrome is a SWI/SNF complex disorder.	ARID1B SMARCA4	1.10e-05	3	67	2	23815551
Pubmed	Differential roles of BAF and PBAF subunits, Arid1b and Arid2, in MLL-AF9 leukemogenesis.	ARID1B ARID2	1.10e-05	3	67	2	35022500
Pubmed	VCIP135 deubiquitinase and its binding protein, WAC, in p97ATPase-mediated membrane fusion.	WAC VCPIP1	1.10e-05	3	67	2	21811234
Pubmed	Mutations affecting components of the SWI/SNF complex cause Coffin-Siris syndrome.	ARID1B SMARCA4	1.10e-05	3	67	2	22426308
Pubmed	Exome sequencing reveals frequent inactivating mutations in ARID1A, ARID1B, ARID2 and ARID4A in microsatellite unstable colorectal cancer.	ARID1B ARID2	1.10e-05	3	67	2	24382590
Pubmed	BRG1, INI1, and ARID1B Deficiency in Endometrial Carcinoma: A Clinicopathologic and Immunohistochemical Analysis of a Large Series From a Single Institution.	ARID1B SMARCA4	1.10e-05	3	67	2	32910019
Pubmed	The interactions of Bcl9/Bcl9L with β-catenin and Pygopus promote breast cancer growth, invasion, and metastasis.	BCL9L BCL9	1.10e-05	3	67	2	34545187
Pubmed	Genome-Wide Transcriptional Regulation Mediated by Biochemically Distinct SWI/SNF Complexes.	ARID1B ARID2	1.10e-05	3	67	2	26716708
Pubmed	Differential regulation of β-catenin-mediated transcription via N- and C-terminal co-factors governs identity of murine intestinal epithelial stem cells.	BCL9L BCL9	1.10e-05	3	67	2	33649334
Pubmed	Allosteric remodelling of the histone H3 binding pocket in the Pygo2 PHD finger triggered by its binding to the B9L/BCL9 co-factor.	BCL9L BCL9	1.10e-05	3	67	2	20637214
Pubmed	ARID1A, ARID1B, and ARID2 Mutations Serve as Potential Biomarkers for Immune Checkpoint Blockade in Patients With Non-Small Cell Lung Cancer.	ARID1B ARID2	1.10e-05	3	67	2	34512623
Pubmed	An antibody-based proximity labeling map reveals mechanisms of SARS-CoV-2 inhibition of antiviral immunity.	ZNF536 ARID1B EIF4ENIF1 WDR33 SMARCA4 PATL1 KIAA1191 RSBN1L VCPIP1	1.12e-05	733	67	9	34672954
Pubmed	Diversity and specialization of mammalian SWI/SNF complexes.	ARID1B ARID2 SMARCA4	1.18e-05	23	67	3	8804307
Pubmed	FET family fusion oncoproteins target the SWI/SNF chromatin remodeling complex.	ARID1B ARID2 SMARCA4	1.18e-05	23	67	3	30962207
Pubmed	The SWI/SNF chromatin-remodeling factor stimulates repair by human excision nuclease in the mononucleosome core particle.	ARID1B ARID2 SMARCA4	1.34e-05	24	67	3	12215535
Pubmed	SWI/SNF chromatin remodeling and cancer.	ARID1B ARID2 SMARCA4	1.34e-05	24	67	3	11790558
Pubmed	Reconstitution of a core chromatin remodeling complex from SWI/SNF subunits.	ARID1B ARID2 SMARCA4	1.34e-05	24	67	3	10078207
Pubmed	Proximity-dependent biotin identification (BioID) reveals a dynamic LSD1-CoREST interactome during embryonic stem cell differentiation.	NCOR1 ZNF536 KMT2D EIF4ENIF1 MCM7 DIAPH3 VCPIP1	1.61e-05	418	67	7	34709266
Pubmed	Exit from G1 and S phase of the cell cycle is regulated by repressor complexes containing HDAC-Rb-hSWI/SNF and Rb-hSWI/SNF.	ARID1B ARID2 SMARCA4	1.72e-05	26	67	3	10778858
Pubmed	Large-scale characterization of HeLa cell nuclear phosphoproteins.	NCOR1 USP10 NCOA6 KMT2D SMARCA4 PATL1 REST BCL9 VCPIP1	1.73e-05	774	67	9	15302935
Pubmed	Genome-wide CRISPR screens identify novel regulators of wild-type and mutant p53 stability.	NCOR1 WDR33 PRRC2C ARID2 KIAA1217 MCM7 DIAPH3 VCPIP1	1.73e-05	588	67	8	38580884
Pubmed	Proteomic Analysis of the EWS-Fli-1 Interactome Reveals the Role of the Lysosome in EWS-Fli-1 Turnover.	BCL9L NCOR1 NCOA6 EIF4ENIF1 TAF9B BCL9 WAC	1.79e-05	425	67	7	24999758
Pubmed	Mapping the Ku Interactome Using Proximity-Dependent Biotin Identification in Human Cells.	NCOR1 NCOA6 SNW1 SMARCA4 RSBN1L WAC	1.81e-05	283	67	6	30585729
Pubmed	An Oct4-centered protein interaction network in embryonic stem cells.	KMT2D SNW1 SMARCA4 MIDEAS GRHL2	1.83e-05	167	67	5	20362541
Pubmed	Glioma tumor suppressor candidate region gene 1 (GLTSCR1) and its paralog GLTSCR1-like form SWI/SNF chromatin remodeling subcomplexes.	ARID1B ARID2 SMARCA4	1.93e-05	27	67	3	29374058
Pubmed	The functional interactome landscape of the human histone deacetylase family.	NCOR1 DDX19A SNW1 WDR33 MIDEAS MEF2C	2.04e-05	289	67	6	23752268
Pubmed	Eda-activated RelB recruits an SWI/SNF (BAF) chromatin-remodeling complex and initiates gene transcription in skin appendage formation.	ARID1B ARID2 SMARCA4	2.16e-05	28	67	3	30037996
Pubmed	Dual role of NRSF/REST in activation and repression of the glucocorticoid response.	SMARCA4 REST	2.19e-05	4	67	2	17984088
Pubmed	Undifferentiated Endometrial Carcinomas Show Frequent Loss of Core Switch/Sucrose Nonfermentable Complex Proteins.	ARID1B SMARCA4	2.19e-05	4	67	2	28863077
Pubmed	Brahma safeguards canalization of cardiac mesoderm differentiation.	SMARCA4 MEF2C	2.19e-05	4	67	2	35082446
Pubmed	Repressive LTR nucleosome positioning by the BAF complex is required for HIV latency.	ARID2 SMARCA4	2.19e-05	4	67	2	22140357
Pubmed	Mitotic phosphorylation of VCIP135 blocks p97ATPase-mediated Golgi membrane fusion.	WAC VCPIP1	2.19e-05	4	67	2	23500464
Pubmed	Two related ARID family proteins are alternative subunits of human SWI/SNF complexes.	ARID1B SMARCA4	2.19e-05	4	67	2	15170388
Pubmed	BCL9 is an essential component of canonical Wnt signaling that mediates the differentiation of myogenic progenitors during muscle regeneration.	BCL9L BCL9	2.19e-05	4	67	2	19699733
Pubmed	Cloning and characterization of hELD/OSA1, a novel BRG1 interacting protein.	ARID1B SMARCA4	2.19e-05	4	67	2	11988099
Pubmed	Grainyhead 1 acts as a drug-inducible conserved transcriptional regulator linked to insulin signaling and lifespan.	KMT2D GRHL2	2.19e-05	4	67	2	35013237
Pubmed	An embryonic stem cell chromatin remodeling complex, esBAF, is essential for embryonic stem cell self-renewal and pluripotency.	ARID1B ARID2 SMARCA4	2.41e-05	29	67	3	19279220
Pubmed	RNF138 inhibits late inflammatory gene transcription through degradation of SMARCC1 of the SWI/SNF complex.	ARID1B ARID2 SMARCA4	2.41e-05	29	67	3	36800290
Pubmed	Mammalian SWI/SNF collaborates with a polycomb-associated protein to regulate male germline transcription in the mouse.	ARID1B ARID2 SMARCA4	2.67e-05	30	67	3	31043422
Pubmed	Targeting TRIM37-driven centrosome dysfunction in 17q23-amplified breast cancer.	NCOR1 KMT2D SNW1 DIAPH3 VCPIP1	2.91e-05	184	67	5	32908313
Pubmed	Bcl9 and Pygo synergise downstream of Apc to effect intestinal neoplasia in FAP mouse models.	BCL9L BCL9	3.64e-05	5	67	2	30760710
Pubmed	The product of an oculopharyngeal muscular dystrophy gene, poly(A)-binding protein 2, interacts with SKIP and stimulates muscle-specific gene expression.	SNW1 SMARCA4	3.64e-05	5	67	2	11371506
Pubmed	Crystal structure of a beta-catenin/BCL9/Tcf4 complex.	BCL9L BCL9	3.64e-05	5	67	2	17052462
Pubmed	LATS2 suppresses oncogenic Wnt signaling by disrupting β-catenin/BCL9 interaction.	BCL9L BCL9	3.64e-05	5	67	2	24360964
Pubmed	Recent advances in understanding chromatin remodeling by Swi/Snf complexes.	ARID1B ARID2	3.64e-05	5	67	2	12672490
Pubmed	A small modulatory dsRNA specifies the fate of adult neural stem cells.	SMARCA4 REST	3.64e-05	5	67	2	15035981
Pubmed	TBX3 acts as tissue-specific component of the Wnt/β-catenin transcriptional complex.	BCL9L BCL9	3.64e-05	5	67	2	32808927
Pubmed	A colorectal cancer expression profile that includes transforming growth factor beta inhibitor BAMBI predicts metastatic potential.	BCL9L BCL9	3.64e-05	5	67	2	19328798
Pubmed	Largest subunits of the human SWI/SNF chromatin-remodeling complex promote transcriptional activation by steroid hormone receptors.	ARID1B SMARCA4	3.64e-05	5	67	2	12200431
Pubmed	Ski-interacting protein, a bifunctional nuclear receptor coregulator that interacts with N-CoR/SMRT and p300.	NCOR1 SNW1	3.64e-05	5	67	2	14985122
Pubmed	BAP1 regulation of the key adaptor protein NCoR1 is critical for γ-globin gene repression.	NCOR1 DDX19A SNW1 TAF9B NOL6 SMARCA4 MCM7 PATL1 RSBN1L SF3B5 SEC23B	4.06e-05	1318	67	11	30463901
Pubmed	The core SWI/SNF catalytic subunit Brg1 regulates nephron progenitor cell proliferation and differentiation.	ARID1B ARID2 SMARCA4	4.28e-05	35	67	3	32504627
Pubmed	Analysis of the SWI/SNF chromatin-remodeling complex during early heart development and BAF250a repression cardiac gene transcription during P19 cell differentiation.	ARID1B ARID2 SMARCA4	5.07e-05	37	67	3	24335282
Pubmed	The p270 (ARID1A/SMARCF1) subunit of mammalian SWI/SNF-related complexes is essential for normal cell cycle arrest.	ARID1B SMARCA4	5.46e-05	6	67	2	16230384
Pubmed	Loss of BCL9/9l suppresses Wnt driven tumourigenesis in models that recapitulate human cancer.	BCL9L BCL9	5.46e-05	6	67	2	30760720
Pubmed	Numerous BAF complex genes are mutated in Coffin-Siris syndrome.	ARID1B SMARCA4	5.46e-05	6	67	2	25081545
Pubmed	BCL9-2 binds Arm/beta-catenin in a Tyr142-independent manner and requires Pygopus for its function in Wg/Wnt signaling.	BCL9L BCL9	5.46e-05	6	67	2	17113272
Pubmed	Role of a BCL9-related beta-catenin-binding protein, B9L, in tumorigenesis induced by aberrant activation of Wnt signaling.	BCL9L BCL9	5.46e-05	6	67	2	15574752
Pubmed	Pax6-dependent, but β-catenin-independent, function of Bcl9 proteins in mouse lens development.	BCL9L BCL9	5.46e-05	6	67	2	25184676
Pubmed	Cloning of the gene for spinocerebellar ataxia 2 reveals a locus with high sensitivity to expanded CAG/glutamine repeats.	ARID1B KMT2D	5.46e-05	6	67	2	8896557
Pubmed	Coactivator as a target gene specificity determinant for histone H3 lysine 4 methyltransferases.	NCOA6 KMT2D	5.46e-05	6	67	2	17021013
Pubmed	HDLBP Promotes Hepatocellular Carcinoma Proliferation and Sorafenib Resistance by Suppressing Trim71-dependent RAF1 Degradation.	USP10 SNW1 WDR33 PRRC2C NOL6 SMARCA4 PATL1 MIDEAS RSBN1L SF3B5 TRIM3	5.80e-05	1371	67	11	36244648
Pubmed	Characterizing WW domain interactions of tumor suppressor WWOX reveals its association with multiprotein networks.	WDR33 SMARCA4 PATL1 DIAPH3 BCL9	6.79e-05	220	67	5	24550385
Pubmed	N-Terminal Acetyltransferase Naa40p Whereabouts Put into N-Terminal Proteoform Perspective.	USP10 SNW1 PRRC2C ARID2 KIAA1217 SMARCA4 RSBN1L WAC VCPIP1	7.41e-05	934	67	9	33916271
Interaction	AR interactions	BCL9L NCOR1 USP10 DDX19A NCOA6 ARID1B KMT2D SNW1 TAF9B WDR33 ARID2 KIAA1217 SMARCA4 MCM7 BCL9 MIDEAS GRHL2 SEC23B WAC	2.29e-10	992	66	19	int:AR
Interaction	SP7 interactions	BCL9L NCOR1 NCOA6 ZNF536 ARID1B KMT2D WDR33 ARID2 SMARCA4 BCL9 MIDEAS	3.95e-09	304	66	11	int:SP7
Interaction	TBXT interactions	NCOR1 NCOA6 ZNF536 ARID1B KMT2D SMARCA4 BCL9 MIDEAS	4.10e-09	116	66	8	int:TBXT
Interaction	EGR2 interactions	BCL9L NCOR1 NCOA6 ZNF536 ARID1B KMT2D ARID2 BCL9 MIDEAS	4.51e-09	171	66	9	int:EGR2
Interaction	PAX9 interactions	BCL9L NCOR1 NCOA6 ZNF536 ARID1B KMT2D BCL9 MIDEAS	1.01e-08	130	66	8	int:PAX9
Interaction	NUP35 interactions	BCL9L NCOR1 DDX19A NCOA6 ARID1B KMT2D EIF4ENIF1 WDR33 PRRC2C SYNE1 BCL9 MIDEAS	1.14e-08	424	66	12	int:NUP35
Interaction	NUP43 interactions	BCL9L NCOR1 NCOA6 ARID1B KMT2D EIF4ENIF1 TAF9B DSCAM SZT2 PRRC2C ARID2 NOL6 SMARCA4 MIDEAS	1.15e-08	625	66	14	int:NUP43
Interaction	MYOD1 interactions	NCOR1 ARID1B KMT2D SNW1 SMARCA4 BCL9 MIDEAS BHLHE40 MEF2C	1.36e-08	194	66	9	int:MYOD1
Interaction	SNRNP40 interactions	BCL9L NCOR1 ARID1B SNW1 EIF4ENIF1 TAF9B ARID2 NOL6 SMARCA4 MCM7 BCL9 MIDEAS RSBN1L WAC	1.46e-08	637	66	14	int:SNRNP40
Interaction	GATA2 interactions	NCOR1 NCOA6 ZNF536 ARID1B KMT2D ARID2 SMARCA4 BCL9 MIDEAS	1.70e-08	199	66	9	int:GATA2
Interaction	SOX17 interactions	NCOR1 NCOA6 ARID1B KMT2D ARID2 BCL9 MIDEAS	2.57e-08	95	66	7	int:SOX17
Interaction	PAX6 interactions	NCOR1 NCOA6 ZNF536 ARID1B KMT2D DSCAM ARID2 SMARCA4 BCL9 MIDEAS GRHL2	2.68e-08	366	66	11	int:PAX6
Interaction	SOX9 interactions	NCOA6 ARID1B KMT2D ARID2 SMARCA4 BCL9 MIDEAS	2.97e-08	97	66	7	int:SOX9
Interaction	TBR1 interactions	BCL9L NCOR1 ZNF536 ARID1B KMT2D BCL9 MIDEAS	8.56e-08	113	66	7	int:TBR1
Interaction	GCM1 interactions	NCOR1 ZNF536 ARID1B KMT2D BCL9 MIDEAS	9.13e-08	68	66	6	int:GCM1
Interaction	TEAD1 interactions	NCOR1 ZNF536 ARID1B KMT2D ARID2 MIDEAS MEF2C TRIM3	1.08e-07	176	66	8	int:TEAD1
Interaction	WWTR1 interactions	NCOR1 USP10 NCOA6 ARID1B KMT2D PRRC2C ARID2 SMARCA4 MCM7 DIAPH3 VCPIP1	1.14e-07	422	66	11	int:WWTR1
Interaction	LHX2 interactions	BCL9L NCOR1 ZNF536 ARID1B KMT2D ARID2 SMARCA4 BCL9	1.45e-07	183	66	8	int:LHX2
Interaction	FEV interactions	NCOR1 NCOA6 ARID1B KMT2D TAF9B ARID2 BCL9 MIDEAS	3.21e-07	203	66	8	int:FEV
Interaction	YAP1 interactions	BCL9L NCOR1 USP10 NCOA6 ARID1B KMT2D SNW1 TAF9B WDR33 PRRC2C ARID2 SMARCA4 MCM7 MIDEAS RSBN1L VCPIP1	3.38e-07	1095	66	16	int:YAP1
Interaction	GSC interactions	BCL9L ZNF536 ARID1B KMT2D BCL9 MIDEAS	4.01e-07	87	66	6	int:GSC
Interaction	TLX3 interactions	BCL9L NCOR1 NCOA6 ARID1B KMT2D ARID2 BCL9 MIDEAS MORN5	4.34e-07	291	66	9	int:TLX3
Interaction	HNRNPLL interactions	NCOR1 USP10 SNW1 EIF4ENIF1 WDR33 KIAA1217 BHLHE40	1.04e-06	163	66	7	int:HNRNPLL
Interaction	TPRX2 interactions	NCOR1 NCOA6 ARID1B KMT2D SMARCA4	1.08e-06	56	66	5	int:TPRX2
Interaction	LHX4 interactions	BCL9L NCOR1 ARID1B KMT2D ARID2 SMARCA4 BCL9	1.17e-06	166	66	7	int:LHX4
Interaction	ASF1A interactions	NCOR1 NCOA6 ZNF536 ARID1B KMT2D ARID2 SMARCA4 MCM7	1.50e-06	249	66	8	int:ASF1A
Interaction	CRX interactions	BCL9L ZNF536 ARID1B KMT2D SZT2 ARID2 BCL9 MIDEAS	1.74e-06	254	66	8	int:CRX
Interaction	ALG13 interactions	NCOR1 ARID1B KMT2D EIF4ENIF1 WDR33 PRRC2C BCL9	2.25e-06	183	66	7	int:ALG13
Interaction	LHX3 interactions	NCOR1 ARID1B KMT2D ARID2 SRGAP1 BCL9 MIDEAS	2.42e-06	185	66	7	int:LHX3
Interaction	HNF1B interactions	NCOR1 ZNF536 ARID1B KMT2D ARID2 BCL9 MIDEAS	2.89e-06	190	66	7	int:HNF1B
Interaction	HNF4A interactions	NCOR1 NCOA6 ARID1B KMT2D TAF9B ARID2 SMARCA4 MIDEAS	3.14e-06	275	66	8	int:HNF4A
Interaction	SMC5 interactions	NCOR1 NCOA6 ARID1B SNW1 TAF9B WDR33 PRRC2C ARID2 NOL6 SMARCA4 MIDEAS RSBN1L SF3B5 WAC	3.46e-06	1000	66	14	int:SMC5
Interaction	NANOG interactions	NCOR1 ARID1B PDE6A WDR33 KIAA1217 NOL6 SMARCA4 REST MIDEAS GRHL2	3.48e-06	481	66	10	int:NANOG
Interaction	TLE3 interactions	BCL9L NCOR1 ARID1B KMT2D ARID2 SMARCA4 BCL9 MIDEAS WAC	3.61e-06	376	66	9	int:TLE3
Interaction	MEN1 interactions	NCOR1 NCOA6 ARID1B KMT2D SNW1 WDR33 ARID2 NOL6 SMARCA4 MIDEAS GRHL2 RSBN1L SF3B5 WAC	4.82e-06	1029	66	14	int:MEN1
Interaction	PPARG interactions	NCOR1 NCOA6 ZNF536 ARID1B KMT2D ARID2 SMARCA4 MCM7	7.06e-06	307	66	8	int:PPARG
Interaction	ERG interactions	NCOR1 NCOA6 ARID1B KMT2D SMARCA4 BCL9 MIDEAS	8.27e-06	223	66	7	int:ERG
Interaction	FMR1 interactions	NCOR1 USP10 EIF4ENIF1 TAF9B PRRC2C KIAA1217 SMARCA4 INAVA BCL9 TRIM3	9.02e-06	536	66	10	int:FMR1
Interaction	SMG7 interactions	NCOR1 NCOA6 ARID1B KMT2D EIF4ENIF1 PATL1 BCL9 GOLGA1	9.34e-06	319	66	8	int:SMG7
Interaction	KLF3 interactions	NCOR1 ZNF536 ARID1B KMT2D TAF9B ARID2 MIDEAS	9.56e-06	228	66	7	int:KLF3
Interaction	SOX10 interactions	NCOR1 ARID1B KMT2D ARID2 BCL9	1.27e-05	92	66	5	int:SOX10
Interaction	PHLPP1 interactions	USP10 SNW1 EIF4ENIF1 PRRC2C KIAA1217 DIAPH3 SF3B5 VCPIP1	1.28e-05	333	66	8	int:PHLPP1
Interaction	ORC6 interactions	BCL9L SNW1 MCM7 BCL9	1.99e-05	49	66	4	int:ORC6
Interaction	TLX1 interactions	NCOR1 ZNF536 ARID1B KMT2D BCL9 MIDEAS	2.32e-05	175	66	6	int:TLX1
Interaction	H3C1 interactions	NCOR1 KMT2D SNW1 PRRC2C SYNE1 ARID2 NOL6 DNAH2 SMARCA4 MCM7 MIDEAS RSBN1L	3.14e-05	901	66	12	int:H3C1
Interaction	PAX8 interactions	NCOR1 ARID1B KMT2D BCL9 MIDEAS	3.17e-05	111	66	5	int:PAX8
Interaction	GATA3 interactions	NCOR1 ZNF536 ARID1B KMT2D BCL9 MIDEAS	3.37e-05	187	66	6	int:GATA3
Interaction	LHX6 interactions	BCL9L ZNF536 ARID2 BCL9	3.90e-05	58	66	4	int:LHX6
Interaction	KLF5 interactions	NCOR1 NCOA6 ARID1B KMT2D ARID2 BCL9	4.26e-05	195	66	6	int:KLF5
Interaction	ETS1 interactions	NCOR1 ARID1B KMT2D ARID2 SMARCA4	4.79e-05	121	66	5	int:ETS1
Interaction	PAX7 interactions	NCOR1 ARID1B KMT2D BCL9 MIDEAS	5.38e-05	124	66	5	int:PAX7
Interaction	NR3C1 interactions	NCOR1 DDX19A NCOA6 ZNF536 ARID1B KMT2D PDE6A ARID2 NOL6 DNAH2 SMARCA4 BCL9	6.68e-05	974	66	12	int:NR3C1
Interaction	FOS interactions	NCOR1 NCOA6 ARID1B KMT2D ARID2 SMARCA4 BCL9	7.10e-05	312	66	7	int:FOS
Interaction	SEC16A interactions	EIF4ENIF1 WDR33 PRRC2C KIAA1217 PATL1 MIDEAS GOLGA1 SEC23B	7.34e-05	426	66	8	int:SEC16A
Interaction	TERF2IP interactions	NCOR1 NCOA6 ZNF536 SNW1 TAF9B WDR33 SMARCA4 MCM7 KIAA1191	7.50e-05	552	66	9	int:TERF2IP
Interaction	KDM4B interactions	NCOR1 ARID1B KMT2D SMARCA4	8.64e-05	71	66	4	int:KDM4B
Interaction	NFIX interactions	NCOR1 ZNF536 ARID1B KMT2D ARID2 MIDEAS	9.88e-05	227	66	6	int:NFIX
Interaction	SOX15 interactions	ARID1B KMT2D ARID2 BCL9 BHLHE40	9.90e-05	141	66	5	int:SOX15
Interaction	NFIB interactions	NCOR1 ARID1B KMT2D BCL9 MIDEAS	1.02e-04	142	66	5	int:NFIB
Interaction	TLX2 interactions	NCOR1 ARID1B KMT2D BCL9 MIDEAS	1.02e-04	142	66	5	int:TLX2
Interaction	ELF5 interactions	ARID1B KMT2D ARID2 MIDEAS GRHL2	1.21e-04	147	66	5	int:ELF5
Interaction	SOX7 interactions	ARID1B KMT2D ARID2 SMARCA4	1.51e-04	82	66	4	int:SOX7
Interaction	NR1H4 interactions	NCOR1 NCOA6 SMARCA4	1.55e-04	32	66	3	int:NR1H4
Interaction	QPRT interactions	NCOR1 ARID1B PRRC2C PATL1	1.66e-04	84	66	4	int:QPRT
Interaction	CEBPA interactions	NCOR1 NCOA6 ARID1B KMT2D SNW1 PRRC2C ARID2 NOL6 SMARCA4 MCM7 BCL9 MIDEAS WAC	1.70e-04	1245	66	13	int:CEBPA
Interaction	PAX2 interactions	ARID1B KMT2D BCL9 MIDEAS	1.74e-04	85	66	4	int:PAX2
Interaction	KLF4 interactions	USP10 ARID1B KMT2D SMARCA4 BCL9	1.79e-04	160	66	5	int:KLF4
Interaction	SMARCB1 interactions	NCOR1 ARID1B ARID2 SMARCA4 MAEL HOOK2 BHLHE40	1.85e-04	364	66	7	int:SMARCB1
Interaction	BRD7 interactions	USP10 ARID1B SNW1 PRRC2C ARID2 SMARCA4 MCM7 MAEL BHLHE40	2.21e-04	637	66	9	int:BRD7
Interaction	RXRA interactions	NCOR1 NCOA6 SNW1 SMARCA4 BHLHE40	2.31e-04	169	66	5	int:RXRA
Interaction	FOXI1 interactions	ZNF536 ARID1B KMT2D BCL9	2.36e-04	92	66	4	int:FOXI1
Interaction	MAPRE1 interactions	USP10 PRRC2C KIAA1217 HOOK2 PATL1 DIAPH3 KIAA1191 GOLGA1	2.66e-04	514	66	8	int:MAPRE1
Interaction	PDCL2 interactions	REST GOLGA1	2.92e-04	8	66	2	int:PDCL2
Interaction	SS18L1 interactions	ARID1B TAF9B ARID2 SMARCA4	3.01e-04	98	66	4	int:SS18L1
Interaction	FXR1 interactions	NCOR1 USP10 SNW1 EIF4ENIF1 PRRC2C SMARCA4 INAVA BHLHE40 TRIM3	3.53e-04	679	66	9	int:FXR1
Interaction	LHX1 interactions	ARID1B KMT2D ARID2 BCL9	3.64e-04	103	66	4	int:LHX1
Interaction	NFIA interactions	NCOR1 ARID1B KMT2D BCL9 MIDEAS	3.78e-04	188	66	5	int:NFIA
Interaction	FOXL1 interactions	NCOR1 ZNF536 KMT2D BCL9 MIDEAS	4.57e-04	196	66	5	int:FOXL1
Interaction	EN1 interactions	NCOR1 ZNF536 KMT2D MIDEAS	4.67e-04	110	66	4	int:EN1
Interaction	NXF3 interactions	EIF4ENIF1 NXF3	4.67e-04	10	66	2	int:NXF3
Interaction	SMARCAD1 interactions	DDX19A SNW1 WDR33 ARID2 SMARCA4	4.68e-04	197	66	5	int:SMARCAD1
Interaction	PYGO2 interactions	BCL9L KMT2D BCL9	5.22e-04	48	66	3	int:PYGO2
Interaction	BCL7C interactions	ARID1B SNW1 ARID2 SMARCA4	5.52e-04	115	66	4	int:BCL7C
Interaction	GBF1 interactions	SZT2 PRRC2C PATL1 DIAPH3 GOLGA1 SEC23B VCPIP1	5.94e-04	442	66	7	int:GBF1
Interaction	SKIL interactions	NCOR1 SNW1 DSCAM NXF3	6.28e-04	119	66	4	int:SKIL
Interaction	ZC3H7A interactions	USP10 EIF4ENIF1 PRRC2C MCM7 PATL1	6.95e-04	215	66	5	int:ZC3H7A
Interaction	LHX8 interactions	KMT2D ARID2 BCL9	6.99e-04	53	66	3	int:LHX8
Interaction	DTX2 interactions	BCL9L NCOR1 EIF4ENIF1 WDR33 BCL9 SEC23B	7.33e-04	330	66	6	int:DTX2
Interaction	GAS2L2 interactions	SNW1 HOOK2 MORN5	7.79e-04	55	66	3	int:GAS2L2
Interaction	SF3A1 interactions	NCOR1 SNW1 SYNE1 SMARCA4 MCM7 PATL1 SF3B5	8.63e-04	471	66	7	int:SF3A1
Interaction	TXNRD2 interactions	NCOR1 NCOA6 FOXR2	8.65e-04	57	66	3	int:TXNRD2
Interaction	HDAC1 interactions	NCOR1 ZNF536 KMT2D EIF4ENIF1 SMARCA4 MCM7 DIAPH3 REST MIDEAS BHLHE40 VCPIP1	8.75e-04	1108	66	11	int:HDAC1
Interaction	NFKBIA interactions	NCOR1 EIF4ENIF1 SMARCA4 MCM7 PATL1	9.05e-04	228	66	5	int:NFKBIA
Interaction	NOTCH1 interactions	USP10 SNW1 SMARCA4 KIAA1191 MEF2C TRIM3	9.23e-04	345	66	6	int:NOTCH1
Interaction	TADA1 interactions	TAF9B FOXR2 SF3B5	1.05e-03	61	66	3	int:TADA1
Interaction	FLI1 interactions	ARID1B ARID2 SMARCA4	1.11e-03	62	66	3	int:FLI1
Interaction	KDM5C interactions	NCOR1 SMARCA4 REST VCPIP1	1.12e-03	139	66	4	int:KDM5C
Interaction	RCOR1 interactions	NCOR1 ZNF536 KMT2D EIF4ENIF1 SMARCA4 REST VCPIP1	1.14e-03	494	66	7	int:RCOR1
Interaction	CBX3 interactions	NCOR1 SNW1 TAF9B ARID2 SMARCA4 REST RSBN1L WAC	1.19e-03	646	66	8	int:CBX3
Interaction	KDM4A interactions	NCOR1 ARID1B SMARCA4	1.21e-03	64	66	3	int:KDM4A
GeneFamily	AT-rich interaction domain containing	ARID1B ARID2	3.55e-04	15	34	2	418
Coexpression	GSE9988_ANTI_TREM1_VS_CTRL_TREATED_MONOCYTES_DN	BCL9L NCOR1 NCOA6 MIDEAS APOBR NAGS	1.24e-05	200	67	6	M5851
ToppCell	facs-Brain_Non-Myeloid-Hippocampus_-18m-Epithelial-neuronal_stem_cell\|Brain_Non-Myeloid / Brain_Non-Myeloid_Brain_Myeloid - method, tissue, subtissue, age, lineage, cell ontology and free annotation	DSCAM DLEC1 INAVA DENND1C DIAPH3	3.15e-06	150	67	5	47ea08d7609e1d2382bf56ef9e5c767e3597cf93
ToppCell	droplet-Thymus-nan-24m-Lymphocytic-DN_to_DP_transition_(some_are_Cd8+/_Cd4+,_some_undergoing_VDJ_recombination__)\|Thymus / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation	IL10RB SZT2 DIP2C HOOK2 WAC	5.97e-06	171	67	5	d1e87478d8c0329e662849823f5c7604f20e1b1a
ToppCell	renal_medulla_nuclei\|World / Celltypes from Cells and Nuclei per compartment and clinical group	ARID1B SYNE1 KIAA1217 CPEB3 GRHL2	9.70e-06	189	67	5	830d9cd0dd706bce22eb2416f07b2c31c870a05a
ToppCell	NS-control-d_0-4-Epithelial-Ciliated\|d_0-4 / Location, Severity, dps_group, Lineage and Cell class of Upper airway (combined)	SYNE1 DNAH2 DLEC1 CFAP43 MORN5	1.16e-05	196	67	5	d46ab80554dd3c1cc81e1938ea2acfd5e85c6d2a
ToppCell	5'-Airway_Nasal-Epithelial-Airway_ciliated\|5' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5	SYNE1 DNAH2 DLEC1 CFAP43 MORN5	1.19e-05	197	67	5	91637bdeab85024b5a02d1066f76cb803a2d6420
ToppCell	5'-Airway_Nasal-Epithelial-Airway_ciliated-ciliated_columnar_cell_of_tracheobronchial_tree\|5' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5	SYNE1 DNAH2 DLEC1 CFAP43 MORN5	1.19e-05	197	67	5	22c87dd15dc57bd0aa98a204c9fc9b3b9b573b45
ToppCell	5'-Airway_Nasal-Epithelial-Airway_ciliated-ciliated_columnar_cell_of_tracheobronchial_tree-Multiciliated_(non-nasal)-Multiciliated_(non-nasal)_L.0.3.0.0\|5' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5	SYNE1 DNAH2 DLEC1 CFAP43 MORN5	1.19e-05	197	67	5	3bbf068d2ad8196fbc85d3f311a7c54c9aece856
ToppCell	5'-Airway_Nasal-Epithelial-Airway_ciliated-ciliated_columnar_cell_of_tracheobronchial_tree-Multiciliated_(non-nasal)\|5' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5	SYNE1 DNAH2 DLEC1 CFAP43 MORN5	1.19e-05	197	67	5	87db09f341e2b20eb6e1c3e917cb5c960387b3e9
ToppCell	Ciliated_cells-B-Donor_01\|World / lung cells shred on cell class, cell subclass, sample id	ZNF536 DNAH2 CFAP43 MORN5	7.53e-05	149	67	4	6399c5a2f06d79f020dece252526f1c0c110d569
ToppCell	PCW_07-8.5-Epithelial-Epithelial_ciliated-epi_ciliated_(14)\|PCW_07-8.5 / Celltypes from embryonic and fetal-stage human lung	DLEC1 CFAP43 GRHL2 MORN5	1.12e-04	165	67	4	0c714e852f912b5749de4cb0895406673979b2e6
ToppCell	PCW_07-8.5-Epithelial-Epithelial_ciliated\|PCW_07-8.5 / Celltypes from embryonic and fetal-stage human lung	DLEC1 CFAP43 GRHL2 MORN5	1.12e-04	165	67	4	82530f96aaefe28a13bad0474bbad043f127a86c
ToppCell	droplet-Lung-LUNG-1m-Myeloid-dendritic_cell\|Lung / Lung_Trachea - method, tissue, subtissue, age, lineage, cell ontology and free annotation	FAH RELL2 MCM7 DLEC1	1.17e-04	167	67	4	e30e7ac8ea4399dc3c1d94fc6b857afc80a7a671
ToppCell	3'-Distal_airway-Epithelial-Airway_ciliated-ciliated_columnar_cell_of_tracheobronchial_tree-Multiciliated_(non-nasal)-Multiciliated_(non-nasal)_L.0.3.3.0\|3' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5	DNAH2 DLEC1 CFAP43 MORN5	1.34e-04	173	67	4	c3762655caa79ac4879876f470d32578a3c93b01
ToppCell	facs-Trachea-nan-24m-Epithelial-ciliated_columnar_cell_of_tracheobronchial_tree\|Trachea / Lung_Trachea - method, tissue, subtissue, age, lineage, cell ontology and free annotation	DLEC1 CFAP43 MORN5 NAGS	1.34e-04	173	67	4	27ae126c720f20d1fe116abbcd358e4cff8baf6b
ToppCell	Children_(3_yrs)-Epithelial-alveolar_epithelial_cell_type_1/2_(AT1/AT2-like)-D046\|Children_(3_yrs) / Lineage, Cell type, age group and donor	DSCAM KIAA1217 DIAPH3 GRHL2	1.34e-04	173	67	4	b799c06a6a5754668e789f70c0c8bc1508568575
ToppCell	(6)_Endothelial_cells-(6)_Endothelial-E\|(6)_Endothelial_cells / Lung cell shreds - cell class (v4) and cell subclass (v4)	PDE6A KIAA1217 NXF3 MEF2C	1.37e-04	174	67	4	4a1b67ce5ea353b3f81f59fa57da07668146afca
ToppCell	Ciliated_cells-B-Donor_02\|World / lung cells shred on cell class, cell subclass, sample id	ZNF536 DNAH2 CFAP43 MORN5	1.46e-04	177	67	4	c38138fb5ad9766c2d240811210c854338cd612e
ToppCell	TCGA-Brain-Primary_Tumor-Low_Grade_Glioma\|TCGA-Brain / Sample_Type by Project: Shred V9	SYNE1 CPEB3 DIP2C WAC	1.46e-04	177	67	4	e8ab340b20cd41554c3841fe980e078e878af35f
ToppCell	Ciliated_cells-A-IPF_01\|World / lung cells shred on cell class, cell subclass, sample id	DNAH2 DLEC1 CFAP43 MORN5	1.49e-04	178	67	4	255473ee6df8a13079fb3bb61038162a40cb4c2c
ToppCell	facs-Brain_Non-Myeloid-Cortex-24m-Epithelial\|Brain_Non-Myeloid / Brain_Non-Myeloid_Brain_Myeloid - method, tissue, subtissue, age, lineage, cell ontology and free annotation	DNAH2 MCM7 CFAP43 MORN5	1.49e-04	178	67	4	6178706db4a855d72abc156537604d575624df56
ToppCell	facs-Brain_Non-Myeloid-Cortex-24m-Epithelial-nan\|Brain_Non-Myeloid / Brain_Non-Myeloid_Brain_Myeloid - method, tissue, subtissue, age, lineage, cell ontology and free annotation	DNAH2 MCM7 CFAP43 MORN5	1.49e-04	178	67	4	f02076ece0fa899e620971c887ad4da7f48684ed
ToppCell	Ciliated_cells-A-SSc-ILD_01\|World / lung cells shred on cell class, cell subclass, sample id	DNAH2 DLEC1 CFAP43 MORN5	1.53e-04	179	67	4	0e6c22de2e3fb0ff23b3301863cf4011c5c59dff
ToppCell	ASK454-Epithelial-Ciliated\|ASK454 / Donor, Lineage and Cell class of Lung cells from Dropseq	CFAP43 GRHL2 MORN5 NAGS	1.53e-04	179	67	4	f21919ef9d3d984e2925ef3d24f89e20fe265dcd
ToppCell	Ciliated_cells-A-Donor_07\|World / lung cells shred on cell class, cell subclass, sample id	DNAH2 DLEC1 CFAP43 MORN5	1.56e-04	180	67	4	d9be152773fe9f2160edad9246fa03c03afeafd6
ToppCell	Ciliated_cells-B-SSc-ILD_02\|World / lung cells shred on cell class, cell subclass, sample id	DNAH2 DLEC1 CFAP43 MORN5	1.63e-04	182	67	4	e44c4810dc7d51a76b86d7623f8e4c4d8b4bf2fc
ToppCell	renal_cortex_nuclei-Adult_normal_reference-Epithelial-Intermediate_tubule_epithelial_cell-kidney_loop_of_Henle_thin_descending_limb_epithelial_cell-Descending_Thin_Limb_Cell_Type_1\|Adult_normal_reference / Celltypes from Cells and Nuclei per compartment and clinical group	SYNE1 CFAP43 DIAPH3 GRHL2	1.66e-04	183	67	4	cfae90c309622b5d499e62a3a8a8b9746478d28d
ToppCell	droplet-Heart-4Chambers-18m-Neuronal-cardiac_neuron\|Heart / Tongue_Heart_Limb_Muscle_Aorta_Diaphragm - method, tissue, subtissue, age, lineage, cell ontology and free annotation	ZNF536 INAVA GRHL2 MORN5	1.70e-04	184	67	4	6388c47b7f1d8203e3069eba0e74107256dcae51
ToppCell	droplet-Heart-4Chambers-18m-Neuronal\|Heart / Tongue_Heart_Limb_Muscle_Aorta_Diaphragm - method, tissue, subtissue, age, lineage, cell ontology and free annotation	ZNF536 INAVA GRHL2 MORN5	1.70e-04	184	67	4	d83ae1dc64aa1b27d3b524c137567418cc0ff8c6
ToppCell	Children_(3_yrs)-Epithelial-ciliated_cell-D139\|Children_(3_yrs) / Lineage, Cell type, age group and donor	DNAH2 DLEC1 CFAP43 MORN5	1.70e-04	184	67	4	5daff849625f2f41d56615569c0ed59cd733b34c
ToppCell	Ciliated_cells-B-IPF_02\|World / lung cells shred on cell class, cell subclass, sample id	DNAH2 DLEC1 CFAP43 MORN5	1.73e-04	185	67	4	4fc7113d3dadc716ec5a8e62b58543cc00ce5b16
ToppCell	Ciliated_cells-B-Myositis-ILD_01\|World / lung cells shred on cell class, cell subclass, sample id	DNAH2 DLEC1 CFAP43 MORN5	1.73e-04	185	67	4	f012c243343e1d1956db19b34d062e9b13de2b2a
ToppCell	15-Airway-Epithelial-Multiciliated_cell\|Airway / Age, Tissue, Lineage and Cell class	DNAH2 DLEC1 CFAP43 MORN5	1.73e-04	185	67	4	0998b6bf44287eebbf39249fff23fc3689e44c4e
ToppCell	Fetal_29-31_weeks-Epithelial-ciliated_cell-D150\|Fetal_29-31_weeks / Lineage, Cell type, age group and donor	DNAH2 DLEC1 CFAP43 MORN5	1.73e-04	185	67	4	3e39a3cb534dfe2301930f3e2f7e8cefb522c158
ToppCell	COVID-19-Epithelial_cells-Airway_ciliated\|COVID-19 / group, cell type (main and fine annotations)	DNAH2 DLEC1 CFAP43 MORN5	1.73e-04	185	67	4	18a40f0a338aa398d81384b5159fb80ce8a2020c
ToppCell	Ciliated_cells-B-IPF_01\|World / lung cells shred on cell class, cell subclass, sample id	DNAH2 DLEC1 CFAP43 MORN5	1.77e-04	186	67	4	f72267d533fd0c5280d9741ceee3dd116300a7e4
ToppCell	NS-critical-d_16-33-Epithelial-Ciliated\|d_16-33 / Location, Severity, dps_group, Lineage and Cell class of Upper airway (combined)	DNAH2 DLEC1 CFAP43 MORN5	1.77e-04	186	67	4	76033438426d8f9c72cd6691a7baf92104c9f03d
ToppCell	droplet-Lung-nan-18m-Epithelial-Ciliated_cell\|Lung / Lung_Trachea - method, tissue, subtissue, age, lineage, cell ontology and free annotation	C16orf96 CFAP43 GRHL2 MORN5	1.77e-04	186	67	4	740fd06bcd3b24e6ff2ecf8080f378afc3e95084
ToppCell	Smart-seq2-blood_(Smart-seq2)-myeloid-myeloid_monocytic-classical_monocyte\|blood_(Smart-seq2) / Per Platform+tissue_group, by lineage_subgroup, cell_group, cell_type	PDE6A PRRC2C SRGAP1 APOBR	1.77e-04	186	67	4	23b8d51d20b05795a73892d3e20e0f9b6a207820
ToppCell	renal_papilla_nuclei-Hypertensive_with+without-CKD-Epithelial-Intermediate_tubule_epithelial_cell-kidney_loop_of_Henle_thin_descending_limb_epithelial_cell\|Hypertensive_with+without-CKD / Celltypes from Cells and Nuclei per compartment and clinical group	SYNE1 DIP2C CFAP43 DIAPH3	1.77e-04	186	67	4	f0c8de4f6ae9047b9108a47a2af8c5f42bc103b0
ToppCell	droplet-Lung-nan-18m-Epithelial-ciliated_columnar_cell_of_tracheobronchial_tree\|Lung / Lung_Trachea - method, tissue, subtissue, age, lineage, cell ontology and free annotation	C16orf96 CFAP43 GRHL2 MORN5	1.77e-04	186	67	4	5ab43a298d23238b34e898d11decf0ad81d1b14e
ToppCell	Ciliated_cells-B-SSc-ILD_01\|World / lung cells shred on cell class, cell subclass, sample id	DNAH2 DLEC1 CFAP43 MORN5	1.81e-04	187	67	4	2b4262c2e7c7830a976be168cee6eeb738d4feda
ToppCell	5'-Parenchyma_lung-Epithelial-Airway_ciliated-ciliated_columnar_cell_of_tracheobronchial_tree-Multiciliated_(non-nasal)-Multiciliated_(non-nasal)_L.0.3.3.1\|5' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5	DNAH2 DLEC1 CFAP43 MORN5	1.81e-04	187	67	4	e61992de4f98eeea08b43213850769d923f8db48
ToppCell	Epithelial-ciliated_cell\|World / Lineage, Cell type, age group and donor	DNAH2 DLEC1 CFAP43 MORN5	1.84e-04	188	67	4	61a459f3fe57e5728efc72637ff2edc2d343492b
ToppCell	21-Trachea-Epithelial-Multiciliated_cell\|Trachea / Age, Tissue, Lineage and Cell class	DNAH2 DLEC1 CFAP43 MORN5	1.84e-04	188	67	4	803bf76a85b3033d2a04b08dd2c03ce9c15529ba
ToppCell	Ciliated_cells-B-Donor_07\|World / lung cells shred on cell class, cell subclass, sample id	DNAH2 DLEC1 CFAP43 MORN5	1.84e-04	188	67	4	606907c865bd2f11bb6474932716550f7723d858
ToppCell	Children_(3_yrs)-Epithelial-ciliated_cell\|Children_(3_yrs) / Lineage, Cell type, age group and donor	DNAH2 DLEC1 CFAP43 MORN5	1.84e-04	188	67	4	2b6dfc88be9ded7b88da9fe78a9cd9f9b3af8af3
ToppCell	(7)_Epithelial-F_(Ciliated)\|World / Lung cell shreds - cell class (v4) and cell subclass (v4)	DNAH2 DLEC1 CFAP43 MORN5	1.84e-04	188	67	4	9a8b9f745eed9f129b6c582f48fbbaaacbebb4b3
ToppCell	COVID-19-lung-Ciliated\|COVID-19 / Disease (COVID-19 only), tissue and cell type	DNAH2 DLEC1 CFAP43 MORN5	1.88e-04	189	67	4	a2da5debd10f27b1280b40141ef0bfef007cc72c
ToppCell	343B-Epithelial_cells-Epithelial-F_(Ciliated)\|Epithelial_cells / Donor, Lineage, Cell class and subclass (all cells)	DNAH2 DLEC1 CFAP43 MORN5	1.88e-04	189	67	4	57ab947b81dbd9d3e896be89e28c4a62cf720837
ToppCell	343B-Epithelial_cells-Epithelial-F_(Ciliated)-\|Epithelial_cells / Donor, Lineage, Cell class and subclass (all cells)	DNAH2 DLEC1 CFAP43 MORN5	1.88e-04	189	67	4	ebc16b8eab84167d74446783d7e802acedc6b9c6
ToppCell	Children_(3_yrs)-Epithelial-ciliated_cell-D032\|Children_(3_yrs) / Lineage, Cell type, age group and donor	DNAH2 DLEC1 CFAP43 MORN5	1.88e-04	189	67	4	68a3cf7763d6f9b95d6d6524eff7a16042703f1d
ToppCell	COVID-19-lung-Ciliated\|lung / Disease (COVID-19 only), tissue and cell type	DNAH2 DLEC1 CFAP43 MORN5	1.88e-04	189	67	4	27329c4661aebabd19fac7fe5dca263fe99d76f3
ToppCell	Ciliated\|World / shred by cell class for parenchyma	DNAH2 DLEC1 CFAP43 MORN5	1.88e-04	189	67	4	711181ca3b9102fb155168b646b0a9b09ff215b2
ToppCell	343B-Epithelial_cells-Epithelial-F_(Ciliated)\|343B / Donor, Lineage, Cell class and subclass (all cells)	DNAH2 DLEC1 CFAP43 MORN5	1.92e-04	190	67	4	169e600e95878000acf5d11f813f9028c7249646
ToppCell	343B-Epithelial_cells-Epithelial-F_(Ciliated)-\|343B / Donor, Lineage, Cell class and subclass (all cells)	DNAH2 DLEC1 CFAP43 MORN5	1.92e-04	190	67	4	0cc36117c793d83cf4a1f66f47758a07d6712bd3
ToppCell	Ciliated_cells-B\|World / lung cells shred on cell class, cell subclass, sample id	DNAH2 DLEC1 CFAP43 MORN5	1.92e-04	190	67	4	7031fbedc13be1a00f6333ad6d51849c3739c2e6
ToppCell	Epithelial_cells-Ciliated_cells-B\|Epithelial_cells / lung cells shred on cell class, cell subclass, sample id	DNAH2 DLEC1 CFAP43 MORN5	1.92e-04	190	67	4	426a4806f6e39d4d57c6746609d30bb3ca62df7d
ToppCell	nucseq-Epithelial-Epithelial_Airway-Ciliated/Deuterosomal-Ciliated\|nucseq / Celltype signatures by Technology, Lineage, Lineage_subclass, Celltype_group, Cell_type2	DNAH2 DLEC1 CFAP43 MORN5	1.96e-04	191	67	4	e417bf491f8b8d7838a61f7f4f6b1740ba97aa3f
ToppCell	nucseq-Epithelial-Epithelial_Airway-Ciliated/Deuterosomal\|nucseq / Celltype signatures by Technology, Lineage, Lineage_subclass, Celltype_group, Cell_type2	DNAH2 DLEC1 CFAP43 MORN5	1.96e-04	191	67	4	9d31c8424d35bdc0c27188b68bfd0f731af3600b
ToppCell	wk_15-18-Epithelial-Proximal_epithelial-MUC16+_ciliated\|wk_15-18 / Celltypes from embryonic and fetal-stage human lung	DNAH2 DLEC1 CFAP43 MORN5	1.96e-04	191	67	4	e81cd65dbf0ef1c2ab7088f73ce605d456dd3a7a
ToppCell	nucseq-Epithelial-Epithelial_Airway\|nucseq / Celltype signatures by Technology, Lineage, Lineage_subclass, Celltype_group, Cell_type2	DNAH2 DLEC1 CFAP43 MORN5	1.96e-04	191	67	4	1c528f72c9ef3ef3a850b05e4a9715190832270c
ToppCell	normal_Lung-Epithelial_cells-Ciliated\|normal_Lung / Location, Cell class and cell subclass	DNAH2 DLEC1 CFAP43 MORN5	2.00e-04	192	67	4	097a13121820ab4e5cd2365600efccf5ea4ce8c3
ToppCell	Ciliated-cil-3\|World / Class top	SYNE1 DNAH2 DLEC1 CFAP43	2.00e-04	192	67	4	4989ebb8812b8af1870599acd932849122c05a29
ToppCell	multiciliated\|World / shred by cell class for turbinate	DNAH2 DLEC1 CFAP43 MORN5	2.00e-04	192	67	4	0f89ea0deb651ca11531c51ee94e0233608d22ea
ToppCell	15-Trachea-Epithelial-Intermediate_ciliated\|Trachea / Age, Tissue, Lineage and Cell class	DNAH2 NXF3 CFAP43 MORN5	2.00e-04	192	67	4	9cbe961a800c981cdc742a47ed18e9c8eb6430bd
ToppCell	IPF-Epithelial-Ciliated\|IPF / Disease state, Lineage and Cell class	DNAH2 CFAP43 GRHL2 MORN5	2.00e-04	192	67	4	354adc1354bf596fbc60dd45c0169688e6f45165
ToppCell	15-Trachea-Epithelial-Multiciliated_cell\|Trachea / Age, Tissue, Lineage and Cell class	DNAH2 DLEC1 CFAP43 MORN5	2.04e-04	193	67	4	aa3acc7571405169efb656d214f3a8cbf988362e
ToppCell	IPF-Epithelial-Ciliated\|Epithelial / Disease state, Lineage and Cell class	SYNE1 DNAH2 CFAP43 MORN5	2.04e-04	193	67	4	ad58f5080e0ba65c845056ea6b79037b636e9c64
ToppCell	wk_20-22-Epithelial-Proximal_epithelial-MUC16+_ciliated\|wk_20-22 / Celltypes from embryonic and fetal-stage human lung	DNAH2 DLEC1 CFAP43 MORN5	2.08e-04	194	67	4	756082a0f5953b52229bb60d40b84701cb6cb23d
ToppCell	3'-Distal_airway\|3' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5	DNAH2 DLEC1 CFAP43 MORN5	2.08e-04	194	67	4	e9ff4398e880d13894e52c0ba9cf19a7662c248b
ToppCell	wk_15-18-Epithelial-Proximal_epithelial\|wk_15-18 / Celltypes from embryonic and fetal-stage human lung	DNAH2 DLEC1 CFAP43 MORN5	2.08e-04	194	67	4	b0477583301dc6d9767b667bd2f8f94fbfaa6f81
ToppCell	3'-Broncho-tracheal-Epithelial-Airway_ciliated-ciliated_columnar_cell_of_tracheobronchial_tree-Multiciliated_(non-nasal)-Multiciliated_(non-nasal)_L.0.3.3.0\|3' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5	SYNE1 DNAH2 DLEC1 CFAP43	2.08e-04	194	67	4	4a2c127c90d1fefe604fcb9e796577d21b489dd6
ToppCell	IPF-Multiplet-Multiplet\|IPF / Disease state, Lineage and Cell class	SYNE1 KIAA1217 CFAP43 GRHL2	2.12e-04	195	67	4	fce0c29574bb7aab181b9c00feb42681e285d1f2
ToppCell	cellseq-Epithelial-Epithelial_Airway-Ciliated/Deuterosomal\|cellseq / Celltype signatures by Technology, Lineage, Lineage_subclass, Celltype_group, Cell_type2	DNAH2 DLEC1 CFAP43 MORN5	2.12e-04	195	67	4	d8bf15aa7cdbc5f29b58e1e6cff76c257f0ea12e
ToppCell	IPF-Multiplet-Multiplet\|World / Disease state, Lineage and Cell class	KIAA1217 CFAP43 GRHL2 MORN5	2.12e-04	195	67	4	21dbdc803c6947024dc2416e9e21c2ef0af9bc31
ToppCell	wk_15-18-Epithelial-Proximal_epithelial-Ciliated\|wk_15-18 / Celltypes from embryonic and fetal-stage human lung	DNAH2 DLEC1 CFAP43 MORN5	2.12e-04	195	67	4	cfcf554b436083179dea1d6fd6e3a800ea2430fe
ToppCell	IPF-Multiplet\|IPF / Disease state, Lineage and Cell class	SYNE1 KIAA1217 CFAP43 GRHL2	2.12e-04	195	67	4	eacc0449ae6f3ad8002268cd061467684c6fb9a7
ToppCell	moderate-Epithelial-Ciliated\|Epithelial / Severity, Lineage and Cell class of Nasopharyngeal (NS) Samples from Patients and Controls	SYNE1 DNAH2 DLEC1 CFAP43	2.12e-04	195	67	4	3486eae5fdb062a75a907b896c9d7b396d2aa195
ToppCell	3'-Distal_airway-Epithelial\|3' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5	DNAH2 DLEC1 CFAP43 MORN5	2.12e-04	195	67	4	72fa2ba064055e2fee2b2cb8633c8f9a3c4373da
ToppCell	3'-Distal_airway-Epithelial-Airway_ciliated-ciliated_columnar_cell_of_tracheobronchial_tree\|3' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5	DNAH2 DLEC1 CFAP43 MORN5	2.16e-04	196	67	4	a37ba02446eef5d1fab703204583f6550a8ec3e1
ToppCell	COVID-19-Epithelial-Ciliated_cells\|Epithelial / Condition, Lineage and Cell class	DNAH2 DLEC1 CFAP43 MORN5	2.16e-04	196	67	4	de7aa31354b019d7321a8ef965d59ce2e8b89276
ToppCell	3'-Distal_airway-Epithelial-Airway_ciliated-ciliated_columnar_cell_of_tracheobronchial_tree-Multiciliated_(non-nasal)\|3' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5	DNAH2 DLEC1 CFAP43 MORN5	2.16e-04	196	67	4	a156840330630e518bc85633dded6f2c3ead3b30
ToppCell	3'-Distal_airway-Epithelial-Airway_ciliated\|3' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5	DNAH2 DLEC1 CFAP43 MORN5	2.16e-04	196	67	4	009e83c7251cf300be78b263634d233a8d972a68
ToppCell	COPD-Multiplet-Multiplet\|COPD / Disease state, Lineage and Cell class	SYNE1 KIAA1217 CFAP43 GRHL2	2.16e-04	196	67	4	af4cdc61830685a888a1209826c23bcf54a43084
ToppCell	BAL-Severe-Epithelial-Epithelial-Ciliated\|Severe / Location, Disease Group, Cell group, Cell class and sub_cluster (2021.03.01)	DNAH2 DLEC1 CFAP43 MORN5	2.16e-04	196	67	4	686a5a0ddb00929842c1c98445c59edfcc9a8a04
ToppCell	BAL-Severe-Epithelial-Epithelial-Ciliated-\|Severe / Location, Disease Group, Cell group, Cell class and sub_cluster (2021.03.09)	DNAH2 DLEC1 CFAP43 MORN5	2.16e-04	196	67	4	67aefc480714e4b8c9ae53c036efdc07ec6f94af
ToppCell	BAL-Severe-Epithelial-Epithelial-Ciliated\|Severe / Location, Disease Group, Cell group, Cell class (2021.03.09)	DNAH2 DLEC1 CFAP43 MORN5	2.16e-04	196	67	4	ca56311edc6788e032e7635fa69b1e07035202b5
ToppCell	3'-Distal_airway-Epithelial-Airway_ciliated-ciliated_columnar_cell_of_tracheobronchial_tree-Multiciliated_(non-nasal)-Multiciliated_(non-nasal)_L.0.3.0.0\|3' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5	DNAH2 DLEC1 CFAP43 MORN5	2.16e-04	196	67	4	89ea4d2086e1c769c5a87f1471a6cd4acabcfe33
ToppCell	Severe_COVID-19-Epithelial-Ciliated\|Severe_COVID-19 / Disease group,lineage and cell class （2021.01.30）	DNAH2 DLEC1 CFAP43 MORN5	2.16e-04	196	67	4	1cdef976a754c90d18b6149d367bd64e6e99b0a9
ToppCell	COPD-Multiplet\|COPD / Disease state, Lineage and Cell class	SYNE1 KIAA1217 CFAP43 GRHL2	2.16e-04	196	67	4	6d02d494196e3f857d53eea46d9419690d43beca
ToppCell	IPF-Epithelial\|IPF / Disease state, Lineage and Cell class	KIAA1217 CFAP43 GRHL2 MORN5	2.16e-04	196	67	4	87d9881cfec461a5d89b688a83749b618c519485
ToppCell	BAL-Severe-Epithelial-Epithelial-Ciliated-\|Severe / Location, Disease Group, Cell group, Cell class and sub_cluster (2021.03.01)	DNAH2 DLEC1 CFAP43 MORN5	2.16e-04	196	67	4	69f5081e06d84ec1d9695762df801a9d0df1984b
ToppCell	367C-Myeloid-Macrophage-M2-like_Macrophage_(MARCO_negative)\|Macrophage / Donor, Lineage, Cell class and subclass (all cells)	SYNE1 SRGAP1 DIP2C MEF2C	2.16e-04	196	67	4	e8c4eeb4b6c6d9bccca2adb942d4cfbaab39636c
ToppCell	3'-Parenchyma_lung-Epithelial-Airway_ciliated-ciliated_columnar_cell_of_tracheobronchial_tree-Multiciliated_(non-nasal)-Multiciliated_(non-nasal)_L.0.3.2.2\|3' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5	SYNE1 DNAH2 DLEC1 CFAP43	2.20e-04	197	67	4	74a2c6cb8fcfe53dd9a2b36492a16c58f38e51c9
ToppCell	control-Epithelial-Ciliated\|control / Severity, Lineage and Cell class of Nasopharyngeal (NS) Samples from Patients and Controls	SYNE1 DLEC1 CFAP43 MORN5	2.20e-04	197	67	4	d4e963c1f82996371bf3d63578ee9fce8e00c5a8
ToppCell	wk_20-22-Epithelial-Proximal_epithelial\|wk_20-22 / Celltypes from embryonic and fetal-stage human lung	DNAH2 DLEC1 CFAP43 MORN5	2.25e-04	198	67	4	16c54b884500066ade05a406915f9569ca8abdfc
ToppCell	10x5'v1-week_14-16-Myeloid_neutrophil-granulo-neutrophil-neutrophil\|week_14-16 / cell types per 3 fetal stages;per 3',per 5'	USP10 SYNE1 APOBR BHLHE40	2.25e-04	198	67	4	e76061e66f6d60f5735962aa7777dda8958caed9
ToppCell	medial-Epithelial-Ciliated-2\|medial / Location, Lineage, Cell class (ontology) and Donor from 10X sequencing (macrophage renamed)	DNAH2 DLEC1 CFAP43 MORN5	2.29e-04	199	67	4	526002f16bbf61cf086278d45a401cc0b0b757a8
ToppCell	distal-Epithelial-Ciliated-2\|distal / Location, Lineage, Cell class (ontology) and Donor from 10X sequencing (macrophage renamed)	DNAH2 DLEC1 CFAP43 MORN5	2.29e-04	199	67	4	2de1fe124737a6cca4b3805ab3056f9d9d7c16c7
ToppCell	medial-Epithelial-Ciliated\|medial / Location, Lineage, Cell class (ontology) and Donor from 10X sequencing (macrophage renamed)	DNAH2 DLEC1 CFAP43 MORN5	2.29e-04	199	67	4	a2daa42b100c422dc8c04fb7d2ebf54293eef574
Disease	Coffin-Siris syndrome	ARID1B ARID2 SMARCA4	2.87e-06	13	65	3	C0265338
Disease	cognitive function measurement	ZNF536 ARID1B ASAP2 KMT2D DSCAM SZT2 PRRC2C SRGAP1 KIAA1217 HOOK2 DIAPH3 BHLHE40 MEF2C	1.23e-05	1434	65	13	EFO_0008354
Disease	MENTAL RETARDATION, AUTOSOMAL DOMINANT 12	ARID1B SMARCA4	4.76e-05	5	65	2	C3281201
Disease	Neurodevelopmental Disorders	ARID1B DSCAM MEF2C WAC	5.40e-05	93	65	4	C1535926
Disease	thyroid gland papillary carcinoma (is_implicated_in)	KMT2D SRGAP1	2.13e-04	10	65	2	DOID:3969 (is_implicated_in)
Disease	decadienedioic acid (C10:2-DC) measurement	SLC17A1 MIDEAS	2.13e-04	10	65	2	EFO_0800598
Disease	Emery-Dreifuss muscular dystrophy (implicated_via_orthology)	SYNE1 HOOK2	3.11e-04	12	65	2	DOID:11726 (implicated_via_orthology)
Disease	multiple sclerosis	IL10RB ASAP2 SYDE2 SMARCA4 INAVA MEF2C ETV3L	3.28e-04	594	65	7	MONDO_0005301
Disease	blood pressure	SYNE1 MEF2C	1.07e-03	22	65	2	EFO_0004325
Disease	spontaneous preterm birth	DSCAM KIAA1217 DLEC1	1.46e-03	101	65	3	EFO_0006917
Disease	creatinine measurement	USP10 DSCAM PRRC2C DIP2C DLEC1 TMEM239 GRHL2 RSBN1L	1.50e-03	995	65	8	EFO_0004518
Disease	caudate volume change measurement, age at assessment	DLEC1 DIAPH3	1.62e-03	27	65	2	EFO_0008007, EFO_0021491
Disease	Sezary Syndrome	KMT2D SMARCA4	1.62e-03	27	65	2	C0036920
Disease	Autosomal dominant nonsyndromic hearing loss	REST GRHL2	1.87e-03	29	65	2	cv:C5779548
Disease	gas trapping measurement	KMT2D DLEC1	1.87e-03	29	65	2	EFO_0007628
Disease	diet measurement	NCOA6 ZNF536 ARID1B DSCAM ARID2 KIAA1217 SMARCA4 MEF2C	2.08e-03	1049	65	8	EFO_0008111

Protein segments in the cluster

Peptide	Gene	Start	Entry
LRMVIPQPAFMAKPD	CFAP43	1136	Q8NDM7
MPELPPMGDNTKSQL	BPIFB4	406	P59827
MNPDKISAPLLMPQR	BHLHE40	366	O14503
PGDPMRKPGQNFMCL	ARID2	1621	Q68CP9
VKRNSPMPSLGEPLM	C1orf185	161	Q5T7R7
MGPPMPTVNRKAQEA	ARID1B	1001	Q8NFD5
PLEMMENFPKPLSEN	DIAPH3	106	Q9NSV4
PPDFRDQEAMQMVPK	DENND1C	36	Q8IV53
PPERRMEGNMPDGTL	NXF3	96	Q9H4D5
MNPKLLQGRVGQMLP	PATL1	296	Q86TB9
PVQMELSPPMGVVQK	REST	776	Q13127
GMLVPKQNVSPPDMS	MAEL	86	Q96JY0
VREKPGPEMANMAPS	GOLGA1	666	Q92805
MQTMEPKQRPAAGAP	HOOK2	611	Q96ED9
AMVLQPPAPMPRKSQ	ASAP2	926	O43150
NPIPMMDRNKADELP	PDE6A	756	P16499
REPVLPPQKMGPMEK	NDUFB6	31	O95139
LPMLEKQLMDPRGPG	NOL6	981	Q9H6R4
PPPMNLGMNNRKPDL	MEF2C	241	Q06413
RMDMKPLVVLGLPAP	NAGS	166	Q8N159
NRMAEDPAALKPPKM	KIAA1191	261	Q96A73
QPPSQFEPLDMKLMR	MCM7	546	P33993
SPDKQRMPMPVNTPL	NCOA6	1091	Q14686
RPMEEEFGPVPSKQM	GRHL2	516	Q6ISB3
MPREGDAQPILNPMK	C16orf96	61	A6NNT2
NGPDKMQMESPLLPG	CPEB3	66	Q8NE35
DMLPAQQKMVPLPFG	BCL9	756	O00512
PMEVPMNAMQRPVRP	BCL9L	621	Q86UU0
DPNQPKPEGAQMLAM	DIP2C	291	Q9Y2E4
SALGMVPPPENVRMN	IL10RB	16	Q08334
PMMPQKVQLEVGRPQ	MIDEAS	181	Q6PJG2
VGVMKPPEMPQKRRP	FOXR2	51	Q6PJQ5
TPIRRPMGQMKPDDS	FAH	171	P16930
MDALMPFAVPNPKQD	FAH	266	P16930
KIQENALPMMLAEPP	DDX19A	116	Q9NUU7
RPEGLEVKPAPMMEA	ETV3L	306	Q6ZN32
MKPNLQPLMPGETFS	DLEC1	651	Q9Y238
NMPAKDMFGSQPPLE	DNAH2	2486	Q9P225
MLQMPKLNEIPPGRA	INAVA	1	Q3KP66
PKPQDGGRVMNMAVP	DSCAM	1876	O60469
VRPGEQMIPVADMPK	RSBN1L	521	Q6PCB5
GPEVMIEQPIPMSKE	SYDE2	1131	Q5VT97
EQMVGMQPPQAPRDL	SZT2	1251	Q5T011
MESGKMAPPKNAPRD	TAF9B	1	Q9HBM6
MAPPKNAPRDALVMA	TAF9B	6	Q9HBM6
QPKAGMPAMERLPPE	RELL2	211	Q8NC24
MKRIKENPPSNMSPD	SLFN14	746	P0C7P3
MVAPRMGVQLKPPAL	SRGAP1	1041	Q7Z6B7
LKQSPPPDMAQNLLM	SYNE1	4371	Q8NF91
GEPERQRMFPMDSKP	NCOR1	891	O75376
MQMDNRLPPKKVPGF	SLC17A1	1	Q14916
PPKPLMRRDQMEGSP	PRRC2C	766	Q9Y520
PNAMMNRKPLQDCPR	PRAMEF20	126	Q5VT98
LPDHLQMAVQGKRPM	SMARCA4	196	P51532
ANIMKSIPNLEMPPA	KIAA1217	996	Q5T5P2
MRDAGDPSPPNKMLR	WAC	46	Q9BTA9
FNLMEKMLQPCGPPA	SF3B5	66	Q9BWJ5
LTKPAMPMQQARPAQ	SEC23B	206	Q15437
QQLLGDPFQGMRKPM	EIF4ENIF1	596	Q9NRA8
DPFQGMRKPMSPITA	EIF4ENIF1	601	Q9NRA8
PGMMQELQARLGRPK	APOBR	1081	Q0VD83
EMQKDPMEPPRFKIN	SNW1	201	Q13573
LMPPQAGMEKEPVPL	VCPIP1	826	Q96JH7
PERGPQSLDKPMNML	ZNF536	1251	O15090
VRLMNEFTNMPVPPK	USP10	466	Q14694
DLVPPIGMLNNPMNA	WDR33	91	Q9C0J8
ALSPGAPDMMQQPRV	TMEM239	36	Q8WW34
MAKREDSPGPEVQPM	TRIM3	1	O75382
PAGMAQLTNMDPPRK	MORN5	101	Q5VZ52
NLLGPQQPMLERPMQ	KMT2D	4151	O14686