Cluster composition

Functions

Category	Name	IntersectionWithQuery	PValue	GenesInTerm	GenesInQuery	GenesInTermInQuery	ID
GeneOntologyMolecularFunction	transcription coactivator activity	MED12L NCOA3 ARID1B FUS TCF20 KMT2E ARID1A PDLIM1 SS18 SS18L1	1.11e-09	303	45	10	GO:0003713
GeneOntologyMolecularFunction	histone phosphatase activity	EYA1 EYA2 EYA3	1.07e-08	3	45	3	GO:0140789
GeneOntologyMolecularFunction	histone H2AXY142 phosphatase activity	EYA1 EYA2 EYA3	1.07e-08	3	45	3	GO:0140793
GeneOntologyMolecularFunction	transcription coregulator activity	MED12L NCOA3 EWSR1 ARID1B FUS TCF20 KMT2E ARID1A PDLIM1 SS18 SS18L1	3.39e-08	562	45	11	GO:0003712
GeneOntologyMolecularFunction	molecular adaptor activity	MED12L YTHDF1 NCOA3 EWSR1 ARID1B FUS TCF20 KMT2E ARID1A PDLIM1 SS18 YTHDF3 TAB3 SS18L1 HGS	1.38e-07	1356	45	15	GO:0060090
GeneOntologyMolecularFunction	protein-macromolecule adaptor activity	MED12L YTHDF1 NCOA3 EWSR1 ARID1B FUS TCF20 KMT2E ARID1A PDLIM1 SS18 YTHDF3 SS18L1 HGS	1.41e-07	1160	45	14	GO:0030674
GeneOntologyMolecularFunction	poly(A) RNA polymerase activity	PAPOLB PAPOLA PAPOLG	2.32e-06	12	45	3	GO:1990817
GeneOntologyMolecularFunction	adenylyltransferase activity	PAPOLB PAPOLA PAPOLG	4.60e-05	31	45	3	GO:0070566
GeneOntologyMolecularFunction	histone modifying activity	NCOA3 EYA1 EYA2 EYA3 KMT2E	1.60e-04	229	45	5	GO:0140993
GeneOntologyMolecularFunction	chromatin binding	FOXO1 PHF1 NCOA3 TSHZ3 ARID1B FUS EYA3 ARID1A	2.17e-04	739	45	8	GO:0003682
GeneOntologyMolecularFunction	transcription factor binding	MED12L FOXO1 PHF1 NCOA3 NKX2-2 FUS ARID1A NR1H4	2.46e-04	753	45	8	GO:0008134
GeneOntologyMolecularFunction	N6-methyladenosine-containing RNA reader activity	YTHDF1 YTHDF3	5.12e-04	15	45	2	GO:1990247
GeneOntologyMolecularFunction	nuclear receptor binding	NCOA3 FUS ARID1A NR1H4	8.22e-04	187	45	4	GO:0016922
GeneOntologyMolecularFunction	modification-dependent protein binding	PHF1 KMT2E TAB3 HGS	1.18e-03	206	45	4	GO:0140030
GeneOntologyMolecularFunction	nuclear retinoid X receptor binding	FUS NR1H4	1.22e-03	23	45	2	GO:0046965
GeneOntologyMolecularFunction	protein-RNA adaptor activity	YTHDF1 YTHDF3	1.33e-03	24	45	2	GO:0140517
GeneOntologyMolecularFunction	protein tyrosine phosphatase activity	EYA1 EYA2 EYA3	1.62e-03	103	45	3	GO:0004725
GeneOntologyMolecularFunction	ubiquitin binding	STAM TAB3 HGS	1.80e-03	107	45	3	GO:0043130
GeneOntologyMolecularFunction	nuclear thyroid hormone receptor binding	NCOA3 FUS	2.66e-03	34	45	2	GO:0046966
GeneOntologyMolecularFunction	ubiquitin-like protein binding	STAM TAB3 HGS	3.00e-03	128	45	3	GO:0032182
GeneOntologyMolecularFunction	transcription coregulator binding	FOXO1 PHF1 NR1H4	3.86e-03	140	45	3	GO:0001221
GeneOntologyMolecularFunction	nucleotidyltransferase activity	PAPOLB PAPOLA PAPOLG	4.86e-03	152	45	3	GO:0016779
GeneOntologyMolecularFunction	nuclear estrogen receptor binding	NCOA3 FUS	6.36e-03	53	45	2	GO:0030331
GeneOntologyMolecularFunction	nuclear retinoic acid receptor binding	FUS NR1H4	6.84e-03	55	45	2	GO:0042974
GeneOntologyBiologicalProcess	positive regulation of DNA repair	ARID1B FUS EYA1 EYA2 EYA3 ARID1A	6.52e-07	143	45	6	GO:0045739
GeneOntologyBiologicalProcess	regulation of DNA repair	ARID1B FUS EYA1 EYA2 EYA3 ARID1A	1.13e-05	234	45	6	GO:0006282
GeneOntologyBiologicalProcess	chromatin organization	PHF1 NCOA3 ARID1B EYA1 EYA2 EYA3 KMT2E ARID1A SS18 SS18L1	1.82e-05	896	45	10	GO:0006325
GeneOntologyBiologicalProcess	chromatin remodeling	PHF1 NCOA3 ARID1B EYA1 EYA2 EYA3 KMT2E ARID1A SS18	2.63e-05	741	45	9	GO:0006338
GeneOntologyBiologicalProcess	positive regulation of transcription by RNA polymerase II	CDK8 MED12L FOXO1 NCOA3 NKX2-2 EYA1 TCF20 SS18 EBF3 NR1H4 SS18L1 CDON	2.99e-05	1390	45	12	GO:0045944
GeneOntologyBiologicalProcess	protein-DNA complex organization	PHF1 NCOA3 ARID1B EYA1 EYA2 EYA3 KMT2E ARID1A SS18 SS18L1	4.60e-05	999	45	10	GO:0071824
GeneOntologyBiologicalProcess	stress granule assembly	YTHDF1 UBAP2L YTHDF3	6.59e-05	36	45	3	GO:0034063
GeneOntologyBiologicalProcess	positive regulation of DNA metabolic process	ARID1B FUS EYA1 EYA2 EYA3 ARID1A	8.11e-05	333	45	6	GO:0051054
GeneOntologyBiologicalProcess	negative regulation of extrinsic apoptotic signaling pathway in absence of ligand	EYA1 EYA2 EYA3	9.06e-05	40	45	3	GO:2001240
GeneOntologyBiologicalProcess	negative regulation of signal transduction in absence of ligand	EYA1 EYA2 EYA3	9.06e-05	40	45	3	GO:1901099
GeneOntologyBiologicalProcess	cell fate specification	NKX2-2 EYA1 EYA2 CDON	1.49e-04	123	45	4	GO:0001708
GeneOntologyBiologicalProcess	positive regulation of stem cell population maintenance	NCOA3 ARID1A SS18	1.88e-04	51	45	3	GO:1902459
GeneOntologyBiologicalProcess	regulation of extrinsic apoptotic signaling pathway in absence of ligand	EYA1 EYA2 EYA3	2.23e-04	54	45	3	GO:2001239
GeneOntologyBiologicalProcess	positive regulation of myoblast differentiation	ARID1B ARID1A CDON	2.23e-04	54	45	3	GO:0045663
GeneOntologyBiologicalProcess	regulation of cellular response to stress	FOXO1 ARID1B FUS EYA1 EYA2 EYA3 ARID1A	2.90e-04	598	45	7	GO:0080135
GeneOntologyBiologicalProcess	mesodermal cell fate specification	EYA1 EYA2	3.58e-04	13	45	2	GO:0007501
GeneOntologyBiologicalProcess	protein transport to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway	STAM HGS	4.80e-04	15	45	2	GO:0043328
GeneOntologyBiologicalProcess	positive regulation of exosomal secretion	STAM HGS	5.48e-04	16	45	2	GO:1903543
GeneOntologyBiologicalProcess	regulation of stem cell population maintenance	NCOA3 ARID1A SS18	6.58e-04	78	45	3	GO:2000036
GeneOntologyBiologicalProcess	double-strand break repair	ARID1B FUS EYA1 EYA3 ARID1A	6.77e-04	324	45	5	GO:0006302
GeneOntologyCellularComponent	npBAF complex	ARID1B ARID1A SS18	3.34e-06	14	45	3	GO:0071564
GeneOntologyCellularComponent	nBAF complex	ARID1B ARID1A SS18L1	5.12e-06	16	45	3	GO:0071565
GeneOntologyCellularComponent	ESCRT-0 complex	STAM HGS	1.36e-05	3	45	2	GO:0033565
GeneOntologyCellularComponent	nuclear protein-containing complex	CDK8 MED12L PHF1 NCOA3 RANBP2 ARID1B KMT2E ARID1A SS18 UBAP2L NR1H4 SS18L1	2.39e-05	1377	45	12	GO:0140513
GeneOntologyCellularComponent	SWI/SNF complex	ARID1B ARID1A SS18	3.63e-05	30	45	3	GO:0016514
GeneOntologyCellularComponent	SWI/SNF superfamily-type complex	ARID1B ARID1A SS18 SS18L1	5.39e-05	96	45	4	GO:0070603
GeneOntologyCellularComponent	ATPase complex	ARID1B ARID1A SS18 SS18L1	1.70e-04	129	45	4	GO:1904949
GeneOntologyCellularComponent	bBAF complex	ARID1B ARID1A	2.02e-04	10	45	2	GO:0140092
GeneOntologyCellularComponent	chromatin	FOXO1 NCOA3 TSHZ3 ARID1B NKX2-2 KMT2E ARID1A SS18 EBF3 NR1H4 SS18L1	2.32e-04	1480	45	11	GO:0000785
GeneOntologyCellularComponent	brahma complex	ARID1B ARID1A	4.06e-04	14	45	2	GO:0035060
GeneOntologyCellularComponent	cytoplasmic stress granule	YTHDF1 UBAP2L YTHDF3	1.16e-03	96	45	3	GO:0010494
GeneOntologyCellularComponent	ESCRT complex	STAM HGS	2.16e-03	32	45	2	GO:0036452
GeneOntologyCellularComponent	mediator complex	CDK8 MED12L	2.88e-03	37	45	2	GO:0016592
HumanPheno	Abnormal response to social norms	CDK8 MED12L ARID1B FUS TCF20 KMT2E ARID1A EBF3 UBAP2L CDON	1.22e-04	807	18	10	HP:5200123
HumanPheno	Social disinhibition	CDK8 MED12L ARID1B FUS TCF20 KMT2E ARID1A EBF3 UBAP2L CDON	1.22e-04	807	18	10	HP:5200029
HumanPheno	Disinhibition	CDK8 MED12L ARID1B FUS TCF20 KMT2E ARID1A EBF3 UBAP2L CDON	1.22e-04	807	18	10	HP:0000734
HumanPheno	Inappropriate behavior	CDK8 MED12L ARID1B FUS TCF20 KMT2E ARID1A EBF3 UBAP2L CDON	1.22e-04	807	18	10	HP:0000719
HumanPheno	Hypoplastic toenails	ARID1B ARID1A EBF3 UBAP2L	1.61e-04	82	18	4	HP:0001800
HumanPheno	Aggressive behavior	MED12L ARID1B TCF20 KMT2E ARID1A EBF3 UBAP2L CDON	1.83e-04	516	18	8	HP:0000718
HumanPheno	Abnormal aggressive, impulsive or violent behavior	MED12L ARID1B TCF20 KMT2E ARID1A EBF3 UBAP2L CDON	1.83e-04	516	18	8	HP:0006919
HumanPheno	Abnormally increased volition	CDK8 MED12L ARID1B FUS TCF20 KMT2E ARID1A EBF3 UBAP2L CDON	2.32e-04	869	18	10	HP:5200263
HumanPheno	Aspiration pneumonia	ARID1B ARID1A TFG CDON	2.84e-04	95	18	4	HP:0011951
HumanPheno	Sandal gap	ARID1B TCF20 ARID1A EBF3	2.96e-04	96	18	4	HP:0001852
HumanPheno	Hyperactivity	CDK8 MED12L ARID1B TCF20 ARID1A EBF3 UBAP2L CDON	3.18e-04	558	18	8	HP:0000752
HumanPheno	Abnormal social development	CDK8 MED12L ARID1B FUS TCF20 KMT2E ARID1A EBF3 UBAP2L CDON	3.38e-04	908	18	10	HP:0025732
HumanPheno	Delayed ability to walk	ARID1B FUS TCF20 KMT2E TFG EBF3	4.33e-04	304	18	6	HP:0031936
HumanPheno	Impairment in personality functioning	CDK8 MED12L ARID1B FUS TCF20 KMT2E ARID1A EBF3 UBAP2L NR1H4 CDON	4.47e-04	1141	18	11	HP:0031466
HumanPheno	Prominent fingertip pads	MED12L ARID1B EBF3	5.12e-04	46	18	3	HP:0001212
HumanPheno	Myopia	CDK8 MED12L ARID1B TCF20 ARID1A EBF3 UBAP2L	5.17e-04	447	18	7	HP:0000545
HumanPheno	Feeding difficulties	CDK8 MED12L ARID1B FUS TCF20 KMT2E ARID1A TFG EBF3 UBAP2L CDON	5.55e-04	1168	18	11	HP:0011968
HumanPheno	Prominent digit pad	MED12L ARID1B EBF3	5.80e-04	48	18	3	HP:0011298
HumanPheno	Aplastic/hypoplastic toenail	ARID1B ARID1A EBF3 UBAP2L	6.31e-04	117	18	4	HP:0010624
HumanPheno	Cochlear malformation	EYA1 EBF3	6.37e-04	11	18	2	HP:0008554
HumanPheno	Abnormality of upper lip vermillion	MED12L ARID1B TCF20 ARID1A EBF3 UBAP2L CDON	6.49e-04	464	18	7	HP:0011339
HumanPheno	Thin upper lip vermilion	MED12L ARID1B TCF20 ARID1A EBF3 UBAP2L	7.77e-04	339	18	6	HP:0000219
HumanPheno	Thin lips	MED12L ARID1B TCF20 ARID1A EBF3 UBAP2L	7.77e-04	339	18	6	HP:0000213
HumanPheno	Maladaptive fear-related cognitions	MED12L FUS TCF20 KMT2E EBF3 UBAP2L CDON	8.29e-04	483	18	7	HP:5200230
HumanPheno	Anxiety	MED12L FUS TCF20 KMT2E EBF3 UBAP2L CDON	8.29e-04	483	18	7	HP:0000739
Domain	-	PAPOLB PAPOLA PAPOLG	1.31e-08	3	45	3	3.30.70.590
Domain	PolyA_polymerase	PAPOLB PAPOLA PAPOLG	1.31e-08	3	45	3	IPR014492
Domain	PAP_central	PAPOLB PAPOLA PAPOLG	1.31e-08	3	45	3	PF04928
Domain	PAP_RNA-bind	PAPOLB PAPOLA PAPOLG	1.31e-08	3	45	3	PF04926
Domain	PolA_pol_cen_dom	PAPOLB PAPOLA PAPOLG	1.31e-08	3	45	3	IPR007012
Domain	PolA_pol_RNA-bd_dom	PAPOLB PAPOLA PAPOLG	1.31e-08	3	45	3	IPR007010
Domain	NuclTrfase_I_C	PAPOLB PAPOLA PAPOLG	1.31e-08	3	45	3	IPR011068
Domain	EYA_fam	EYA1 EYA2 EYA3	5.22e-08	4	45	3	IPR028472
Domain	EYA_dom	EYA1 EYA2 EYA3	5.22e-08	4	45	3	IPR006545
Domain	zf-RanBP	RANBP2 EWSR1 FUS TAB3	2.08e-07	22	45	4	PF00641
Domain	ZnF_RBZ	RANBP2 EWSR1 FUS TAB3	2.52e-07	23	45	4	SM00547
Domain	ZF_RANBP2_2	RANBP2 EWSR1 FUS TAB3	2.52e-07	23	45	4	PS50199
Domain	ZF_RANBP2_1	RANBP2 EWSR1 FUS TAB3	3.02e-07	24	45	4	PS01358
Domain	Znf_RanBP2	RANBP2 EWSR1 FUS TAB3	3.58e-07	25	45	4	IPR001876
Domain	NTP_transf_2	PAPOLB PAPOLA PAPOLG	2.13e-06	11	45	3	PF01909
Domain	Polymerase_NTP_transf_dom	PAPOLB PAPOLA PAPOLG	2.13e-06	11	45	3	IPR002934
Domain	BAF250_C	ARID1B ARID1A	5.68e-06	2	45	2	IPR033388
Domain	BAF250_C	ARID1B ARID1A	5.68e-06	2	45	2	PF12031
Domain	BAF250/Osa	ARID1B ARID1A	5.68e-06	2	45	2	IPR021906
Domain	SSXT	SS18 SS18L1	1.70e-05	3	45	2	PF05030
Domain	SS18_fam	SS18 SS18L1	1.70e-05	3	45	2	IPR007726
Domain	YTH	YTHDF1 YTHDF3	5.65e-05	5	45	2	PS50882
Domain	YTH_domain	YTHDF1 YTHDF3	5.65e-05	5	45	2	IPR007275
Domain	YTH	YTHDF1 YTHDF3	5.65e-05	5	45	2	PF04146
Domain	VHS	STAM HGS	2.02e-04	9	45	2	SM00288
Domain	VHS_dom	STAM HGS	2.02e-04	9	45	2	IPR002014
Domain	VHS	STAM HGS	2.02e-04	9	45	2	PF00790
Domain	VHS	STAM HGS	2.02e-04	9	45	2	PS50179
Domain	-	EWSR1 FUS	2.52e-04	10	45	2	4.10.1060.10
Domain	Znf_FYVE_PHD	PHF1 TCF20 KMT2E HGS	4.27e-04	147	45	4	IPR011011
Domain	-	ARID1B ARID1A	5.84e-04	15	45	2	1.10.150.60
Domain	ARID	ARID1B ARID1A	5.84e-04	15	45	2	PF01388
Domain	BRIGHT	ARID1B ARID1A	5.84e-04	15	45	2	SM00501
Domain	ARID_dom	ARID1B ARID1A	5.84e-04	15	45	2	IPR001606
Domain	ARID	ARID1B ARID1A	5.84e-04	15	45	2	PS51011
Domain	UIM	STAM HGS	8.47e-04	18	45	2	PF02809
Domain	UIM	STAM HGS	1.16e-03	21	45	2	SM00726
Domain	PHD	PHF1 TCF20 KMT2E	1.28e-03	89	45	3	SM00249
Domain	Znf_PHD	PHF1 TCF20 KMT2E	1.37e-03	91	45	3	IPR001965
Domain	UIM	STAM HGS	1.51e-03	24	45	2	PS50330
Domain	ZF_PHD_2	PHF1 TCF20 KMT2E	1.55e-03	95	45	3	PS50016
Domain	ZF_PHD_1	PHF1 TCF20 KMT2E	1.60e-03	96	45	3	PS01359
Domain	UIM_dom	STAM HGS	1.64e-03	25	45	2	IPR003903
Domain	-	STAM HGS	1.78e-03	26	45	2	1.25.40.90
Domain	ENTH_VHS	STAM HGS	2.21e-03	29	45	2	IPR008942
Pathway	REACTOME_REGULATION_OF_MITF_M_DEPENDENT_GENES_INVOLVED_IN_PIGMENTATION	ARID1B ARID1A SS18 SS18L1	2.62e-06	42	33	4	M48237
Pathway	REACTOME_MITF_M_DEPENDENT_GENE_EXPRESSION	ARID1B ARID1A SS18 SS18L1	6.82e-05	95	33	4	M48268
Pathway	REACTOME_REGULATION_OF_ENDOGENOUS_RETROELEMENTS_BY_PIWI_INTERACTING_RNAS_PIRNAS	ARID1B ARID1A SS18 SS18L1	7.40e-05	97	33	4	M48262
Pathway	REACTOME_MITF_M_REGULATED_MELANOCYTE_DEVELOPMENT	ARID1B ARID1A SS18 SS18L1	2.81e-04	137	33	4	M48232
Pathway	REACTOME_EPIGENETIC_REGULATION_OF_GENE_EXPRESSION	PHF1 ARID1B ARID1A SS18 SS18L1	2.87e-04	254	33	5	M27131
Pathway	REACTOME_DNA_DOUBLE_STRAND_BREAK_RESPONSE	EYA1 EYA2 EYA3	3.14e-04	57	33	3	MM15298
Pathway	REACTOME_REGULATION_OF_ENDOGENOUS_RETROELEMENTS	ARID1B ARID1A SS18 SS18L1	3.22e-04	142	33	4	M48257
Pathway	KEGG_RNA_DEGRADATION	PAPOLB PAPOLA PAPOLG	3.47e-04	59	33	3	M963
Pathway	WP_EGFEGFR_SIGNALING	FOXO1 NCOA3 STAM HGS	5.30e-04	162	33	4	M39334
Pathway	REACTOME_INLB_MEDIATED_ENTRY_OF_LISTERIA_MONOCYTOGENES_INTO_HOST_CELL	STAM HGS	5.47e-04	15	33	2	M27774
Pathway	WP_RUBINSTEINTAYBI_SYNDROME_1	FOXO1 NCOA3	5.47e-04	15	33	2	M48323
Pathway	WP_MRNA_PROCESSING	PAPOLB EWSR1 FUS ILF3 PAPOLA PAPOLG	5.51e-04	451	33	6	MM15946
Pathway	REACTOME_DNA_DOUBLE_STRAND_BREAK_RESPONSE	EYA1 EYA2 EYA3	7.89e-04	78	33	3	M27589
Pathway	REACTOME_LISTERIA_MONOCYTOGENES_ENTRY_INTO_HOST_CELLS	STAM HGS	9.83e-04	20	33	2	M27780
Pathway	REACTOME_NEGATIVE_REGULATION_OF_MET_ACTIVITY	STAM HGS	1.09e-03	21	33	2	M27645
Pathway	REACTOME_NEGATIVE_REGULATION_OF_MET_ACTIVITY	STAM HGS	1.09e-03	21	33	2	MM15347
Pathway	REACTOME_REGULATION_OF_GENE_EXPRESSION_IN_BETA_CELLS	FOXO1 NKX2-2	1.09e-03	21	33	2	M14966
Pathway	REACTOME_DEVELOPMENTAL_BIOLOGY	CDK8 FOXO1 NCOA3 ARID1B NKX2-2 EYA1 ARID1A SS18 SS18L1 CDON	1.18e-03	1432	33	10	M509
Pathway	BIOCARTA_VDR_PATHWAY	NCOA3 ARID1A	1.19e-03	22	33	2	MM1370
Pathway	WP_KLEEFSTRA_SYNDROME	ARID1B ARID1A	2.07e-03	29	33	2	M48076
Pathway	REACTOME_ENDOSOMAL_SORTING_COMPLEX_REQUIRED_FOR_TRANSPORT_ESCRT	STAM HGS	2.37e-03	31	33	2	M1009
Pathway	REACTOME_EGFR_DOWNREGULATION	STAM HGS	2.37e-03	31	33	2	MM14705
Pathway	WP_TUMOR_SUPPRESSOR_ACTIVITY_OF_SMARCB1	ARID1B ARID1A	2.37e-03	31	33	2	M39522
Pathway	REACTOME_EGFR_DOWNREGULATION	STAM HGS	2.37e-03	31	33	2	M16597
Pathway	REACTOME_ENDOSOMAL_SORTING_COMPLEX_REQUIRED_FOR_TRANSPORT_ESCRT	STAM HGS	2.37e-03	31	33	2	MM15637
Pathway	WP_PREGNANE_X_RECEPTOR_PATHWAY	FOXO1 NCOA3	2.52e-03	32	33	2	M39567
Pathway	REACTOME_REGULATION_OF_LIPID_METABOLISM_BY_PPARALPHA	CDK8 NCOA3 NR1H4	2.60e-03	118	33	3	M27316
Pubmed	FET family fusion oncoproteins target the SWI/SNF chromatin remodeling complex.	EWSR1 ARID1B FUS ARID1A SS18	9.53e-11	23	45	5	30962207
Pubmed	Human transcription factor protein interaction networks.	YTHDF1 NCOA3 TSHZ3 EWSR1 ARID1B LASP1 EYA3 TCF20 ARID1A SS18 UBAP2L YTHDF3 TAB3 SS18L1 HGS	1.61e-10	1429	45	15	35140242
Pubmed	Comparative Application of BioID and TurboID for Protein-Proximity Biotinylation.	YTHDF1 TOR1AIP2 NCOA3 EWSR1 ARID1B FUS TCF20 ARID1A TFG YTHDF3	2.94e-10	457	45	10	32344865
Pubmed	Eyes absent represents a class of protein tyrosine phosphatases.	EYA1 EYA2 EYA3	2.02e-09	3	45	3	14628052
Pubmed	A human homologue of the Drosophila eyes absent gene underlies branchio-oto-renal (BOR) syndrome and identifies a novel gene family.	EYA1 EYA2 EYA3	2.02e-09	3	45	3	9020840
Pubmed	The Nse5/6-like SIMC1-SLF2 complex localizes SMC5/6 to viral replication centers.	YTHDF1 RANBP2 EWSR1 ARID1B FUS ILF3 TCF20 ARID1A SS18 UBAP2L YTHDF3 SS18L1	2.12e-09	954	45	12	36373674
Pubmed	Kinetic analysis of npBAF to nBAF switching reveals exchange of SS18 with CREST and integration with neural developmental pathways.	ARID1B ARID1A SS18 SS18L1	3.30e-09	15	45	4	23785148
Pubmed	Characterization of TFG in mus musculus and Caenorhabditis elegans.	EWSR1 FUS TFG	8.09e-09	4	45	3	10092511
Pubmed	Tat-dependent occlusion of the HIV poly(A) site.	PAPOLB PAPOLA PAPOLG	8.09e-09	4	45	3	8491200
Pubmed	Misexpression of the eyes absent family triggers the apoptotic program.	EYA1 EYA2 EYA3	8.09e-09	4	45	3	11700312
Pubmed	A novel role for the peptidyl-prolyl cis-trans isomerase Cyclophilin A in DNA-repair following replication fork stalling via the MRE11-RAD50-NBS1 complex.	ARID1B FUS ILF3 EYA3 TCF20 ARID1A TFG YTHDF3 HGS	8.32e-09	472	45	9	38943005
Pubmed	PRISMA and BioID disclose a motifs-based interactome of the intrinsically disordered transcription factor C/EBPα.	CDK8 NCOA3 RANBP2 EWSR1 ARID1B LASP1 FUS ILF3 EYA3 TCF20 ARID1A EBF3	1.07e-08	1103	45	12	34189442
Pubmed	An atlas of combinatorial transcriptional regulation in mouse and man.	PHF1 PAPOLB NCOA3 EWSR1 NKX2-2 EYA2 EYA3 TCF20 EBF3 SS18L1 PAPOLG	1.14e-08	877	45	11	20211142
Pubmed	Interaction network of human early embryonic transcription factors.	NCOA3 RANBP2 TSHZ3 ARID1B TCF20 ARID1A YTHDF3 SS18L1	1.55e-08	351	45	8	38297188
Pubmed	Mouse Eya homologues of the Drosophila eyes absent gene require Pax6 for expression in lens and nasal placode.	EYA1 EYA2 EYA3	2.02e-08	5	45	3	9006082
Pubmed	Cooperation of six and eya in activation of their target genes through nuclear translocation of Eya.	EYA1 EYA2 EYA3	2.02e-08	5	45	3	10490620
Pubmed	Eyes absent: a gene family found in several metazoan phyla.	EYA1 EYA2 EYA3	2.02e-08	5	45	3	9195991
Pubmed	EYA4, a novel vertebrate gene related to Drosophila eyes absent.	EYA1 EYA2 EYA3	4.04e-08	6	45	3	9887327
Pubmed	SND1 binds SARS-CoV-2 negative-sense RNA and promotes viral RNA synthesis through NSP9.	YTHDF1 EWSR1 LASP1 FUS ILF3 UBAP2L YTHDF3	4.07e-08	258	45	7	37794589
Pubmed	Global proteomics of Ubqln2-based murine models of ALS.	LASP1 STAM EYA3 TFG SS18 TAB3 HGS	4.40e-08	261	45	7	33277362
Pubmed	Reversible disruption of mSWI/SNF (BAF) complexes by the SS18-SSX oncogenic fusion in synovial sarcoma.	ARID1B ARID1A SS18	7.06e-08	7	45	3	23540691
Pubmed	Identification of proximal SUMO-dependent interactors using SUMO-ID.	RANBP2 LASP1 ILF3 STAM EYA3 UBAP2L YTHDF3 PAPOLG	9.44e-08	444	45	8	34795231
Pubmed	DNA Repair Network Analysis Reveals Shieldin as a Key Regulator of NHEJ and PARP Inhibitor Sensitivity.	CDK8 EWSR1 ARID1B FUS ILF3 TCF20 ARID1A SS18L1	1.10e-07	453	45	8	29656893
Pubmed	SYT associates with human SNF/SWI complexes and the C-terminal region of its fusion partner SSX1 targets histones.	ARID1B ARID1A SS18	4.42e-07	12	45	3	11734557
Pubmed	Rescue of deficits by Brwd1 copy number restoration in the Ts65Dn mouse model of Down syndrome.	ARID1B SS18 SS18L1	7.29e-07	14	45	3	36289231
Pubmed	Loss of TRIM31 promotes breast cancer progression through regulating K48- and K63-linked ubiquitination of p53.	YTHDF1 EWSR1 FUS ILF3 SS18 UBAP2L SS18L1	1.11e-06	421	45	7	34650049
Pubmed	RNF43 inhibits WNT5A-driven signaling and suppresses melanoma invasion and resistance to the targeted therapy.	RANBP2 STAM TCF20 ARID1A TAB3 HGS	1.12e-06	263	45	6	34702444
Pubmed	Proteomic Analysis of the EWS-Fli-1 Interactome Reveals the Role of the Lysosome in EWS-Fli-1 Turnover.	NCOA3 EWSR1 FUS EYA3 TCF20 ARID1A TFG	1.18e-06	425	45	7	24999758
Pubmed	TNF-α inhibits glucocorticoid receptor-induced gene expression by reshaping the GR nuclear cofactor profile.	TOR1AIP2 NCOA3 ARID1B TCF20 ARID1A CSMD2 SS18 SS18L1	1.45e-06	638	45	8	31182584
Pubmed	Loss of BAF (mSWI/SNF) Complexes Causes Global Transcriptional and Chromatin State Changes in Forebrain Development.	ARID1B ARID1A SS18 SS18L1	1.56e-06	65	45	4	26655900
Pubmed	A systematic study of nuclear interactome of C-terminal domain small phosphatase-like 2 using inducible expression system and shotgun proteomics.	NCOA3 FUS ILF3	1.63e-06	18	45	3	26674342
Pubmed	EWS-FLI1 modulated alternative splicing of ARID1A reveals novel oncogenic function through the BAF complex.	EWSR1 ARID1A	1.64e-06	2	45	2	31392992
Pubmed	Dual ARID1A/ARID1B loss leads to rapid carcinogenesis and disruptive redistribution of BAF complexes.	ARID1B ARID1A	1.64e-06	2	45	2	34386776
Pubmed	Regulation of spermatogenesis by testis-specific, cytoplasmic poly(A) polymerase TPAP.	PAPOLB PAPOLA	1.64e-06	2	45	2	12471261
Pubmed	Cytoplasmic m6A reader YTHDF3 promotes mRNA translation.	YTHDF1 YTHDF3	1.64e-06	2	45	2	28106076
Pubmed	Deletion of YTHDF1 (not YTHDF3) reduced brain and gut damage after traumatic brain injury.	YTHDF1 YTHDF3	1.64e-06	2	45	2	39081030
Pubmed	Integrated genomic analyses identify ARID1A and ARID1B alterations in the childhood cancer neuroblastoma.	ARID1B ARID1A	1.64e-06	2	45	2	23202128
Pubmed	ARID1 proteins: from transcriptional and post-translational regulation to carcinogenesis and potential therapeutics.	ARID1B ARID1A	1.64e-06	2	45	2	33890484
Pubmed	ESCRT-0 protein hepatocyte growth factor-regulated tyrosine kinase substrate (Hrs) is targeted to endosomes independently of signal-transducing adaptor molecule (STAM) and the complex formation with STAM promotes its endosomal dissociation.	STAM HGS	1.64e-06	2	45	2	25296754
Pubmed	Expression patterns of the human sarcoma-associated genes FUS and EWS and the genomic structure of FUS.	EWSR1 FUS	1.64e-06	2	45	2	8921363
Pubmed	ARID1B is a specific vulnerability in ARID1A-mutant cancers.	ARID1B ARID1A	1.64e-06	2	45	2	24562383
Pubmed	EWS and FUS bind a subset of transcribed genes encoding proteins enriched in RNA regulatory functions.	EWSR1 FUS	1.64e-06	2	45	2	26573619
Pubmed	Hrs is associated with STAM, a signal-transducing adaptor molecule. Its suppressive effect on cytokine-induced cell growth.	STAM HGS	1.64e-06	2	45	2	9407053
Pubmed	Dissecting the role of SWI/SNF component ARID1B in steady-state hematopoiesis.	ARID1B ARID1A	1.64e-06	2	45	2	37611161
Pubmed	Subunits of ARID1 serve as novel biomarkers for the sensitivity to immune checkpoint inhibitors and prognosis of advanced non-small cell lung cancer.	ARID1B ARID1A	1.64e-06	2	45	2	32791957
Pubmed	ARID1B as a Potential Therapeutic Target for ARID1A-Mutant Ovarian Clear Cell Carcinoma.	ARID1B ARID1A	1.64e-06	2	45	2	29890703
Pubmed	MUC4 is a sensitive and extremely useful marker for sclerosing epithelioid fibrosarcoma: association with FUS gene rearrangement.	FUS MUC4	1.64e-06	2	45	2	22982887
Pubmed	Detection of SYT and EWS gene rearrangements by dual-color break-apart CISH in liquid-based cytology samples of synovial sarcoma and Ewing sarcoma/primitive neuroectodermal tumor.	EWSR1 SS18	1.64e-06	2	45	2	20660338
Pubmed	SWI/SNF factors required for cellular resistance to DNA damage include ARID1A and ARID1B and show interdependent protein stability.	ARID1B ARID1A	1.64e-06	2	45	2	24788099
Pubmed	Chromatin accessibility underlies synthetic lethality of SWI/SNF subunits in ARID1A-mutant cancers.	ARID1B ARID1A	1.64e-06	2	45	2	28967863
Pubmed	Establishment and characterization of VOA1066 cells: An undifferentiated endometrial carcinoma cell line.	ARID1B ARID1A	1.64e-06	2	45	2	33052929
Pubmed	Hrs, a mammalian master molecule in vesicular transport and protein sorting, suppresses the degradation of ESCRT proteins signal transducing adaptor molecule 1 and 2.	STAM HGS	1.64e-06	2	45	2	15640163
Pubmed	Concurrent ARID1A and ARID1B inactivation in endometrial and ovarian dedifferentiated carcinomas.	ARID1B ARID1A	1.64e-06	2	45	2	27562491
Pubmed	Common origin of the human synovial sarcoma associated SS18 and SS18L1 gene loci.	SS18 SS18L1	1.64e-06	2	45	2	16484776
Pubmed	A morphologic and molecular reappraisal of myoepithelial tumors of soft tissue, bone, and viscera with EWSR1 and FUS gene rearrangements.	EWSR1 FUS	1.64e-06	2	45	2	31994243
Pubmed	WW domains provide a platform for the assembly of multiprotein networks.	EWSR1 FUS ARID1A TFG UBAP2L	1.69e-06	154	45	5	16055720
Pubmed	Mapping the Ku Interactome Using Proximity-Dependent Biotin Identification in Human Cells.	EWSR1 FUS ILF3 TCF20 PAPOLA PDLIM1	1.72e-06	283	45	6	30585729
Pubmed	Histone-binding of DPF2 mediates its repressive role in myeloid differentiation.	EWSR1 ARID1B LASP1 FUS ARID1A PAPOLG	1.72e-06	283	45	6	28533407
Pubmed	The Epigenetic Factor Landscape of Developing Neocortex Is Regulated by Transcription Factors Pax6→ Tbr2→ Tbr1.	PHF1 ARID1B ARID1A SS18 SS18L1	1.86e-06	157	45	5	30186101
Pubmed	m6A regulation of cortical and retinal neurogenesis is mediated by the redundant m6A readers YTHDFs.	YTHDF1 ARID1B YTHDF3	1.93e-06	19	45	3	36039295
Pubmed	Dynamic Protein Interactions of the Polycomb Repressive Complex 2 during Differentiation of Pluripotent Cells.	PHF1 NCOA3 RANBP2 EYA1 ARID1A MUC4 UBAP2L	2.26e-06	469	45	7	27634302
Pubmed	Agonist-specific Protein Interactomes of Glucocorticoid and Androgen Receptor as Revealed by Proximity Mapping.	NCOA3 ARID1B TCF20 ARID1A	3.25e-06	78	45	4	28611094
Pubmed	Genetic and Proteomic Interrogation of Lower Confidence Candidate Genes Reveals Signaling Networks in β-Catenin-Active Cancers.	CDK8 RANBP2 EWSR1 LASP1 FUS ILF3 ARID1A PAPOLA YTHDF3 HGS	3.44e-06	1247	45	10	27684187
Pubmed	Prohibitin 1 regulates tumor cell apoptosis via the interaction with X-linked inhibitor of apoptosis protein.	TOR1AIP2 EWSR1 FUS ILF3 USP9Y TFG UBAP2L YTHDF3	3.74e-06	725	45	8	27025967
Pubmed	Identification of the SOX2 Interactome by BioID Reveals EP300 as a Mediator of SOX2-dependent Squamous Differentiation and Lung Squamous Cell Carcinoma Growth.	NCOA3 ARID1B TCF20 ARID1A	4.17e-06	83	45	4	28794006
Pubmed	Spatial proteomics reveal that the protein phosphatase PTP1B interacts with and may modify tyrosine phosphorylation of the rhomboid protease RHBDL4.	TOR1AIP2 RANBP2 STAM PDLIM1 HGS	4.85e-06	191	45	5	31177093
Pubmed	Loss of ARID1B and SMARCB1 expression are specific for the diagnosis of dedifferentiated/undifferentiated carcinoma in tumours of the upper gynaecological tract and cervix.	ARID1B ARID1A	4.91e-06	3	45	2	33432679
Pubmed	Dephosphorylation of the C-terminal tyrosyl residue of the DNA damage-related histone H2A.X is mediated by the protein phosphatase eyes absent.	EYA2 EYA3	4.91e-06	3	45	2	19351884
Pubmed	YTHDF3 facilitates translation and decay of N6-methyladenosine-modified RNA.	YTHDF1 YTHDF3	4.91e-06	3	45	2	28106072
Pubmed	FUS-NFATC2 or EWSR1-NFATC2 Fusions Are Present in a Large Proportion of Simple Bone Cysts.	EWSR1 FUS	4.91e-06	3	45	2	32991339
Pubmed	Hybrid structural model of the complete human ESCRT-0 complex.	STAM HGS	4.91e-06	3	45	2	19278655
Pubmed	YTHDF2 suppresses the plasmablast genetic program and promotes germinal center formation.	YTHDF1 YTHDF3	4.91e-06	3	45	2	35508130
Pubmed	Dynamics of expression of ARID1A and ARID1B subunits in mouse embryos and in cells during the cell cycle.	ARID1B ARID1A	4.91e-06	3	45	2	21647563
Pubmed	The multifunctional FUS, EWS and TAF15 proto-oncoproteins show cell type-specific expression patterns and involvement in cell spreading and stress response.	EWSR1 FUS	4.91e-06	3	45	2	18620564
Pubmed	A Unified Model for the Function of YTHDF Proteins in Regulating m6A-Modified mRNA.	YTHDF1 YTHDF3	4.91e-06	3	45	2	32492408
Pubmed	Mouse Eya genes are expressed during limb tendon development and encode a transcriptional activation function.	EYA1 EYA2	4.91e-06	3	45	2	9342347
Pubmed	TNPO1-mediated nuclear import of ARID1B promotes tumor growth in ARID1A-deficient gynecologic cancer.	ARID1B ARID1A	4.91e-06	3	45	2	34044070
Pubmed	Genome-Wide Transcriptional Regulation Mediated by Biochemically Distinct SWI/SNF Complexes.	ARID1B ARID1A	4.91e-06	3	45	2	26716708
Pubmed	mRNA and protein levels of FUS, EWSR1, and TAF15 are upregulated in liposarcoma.	EWSR1 FUS	4.91e-06	3	45	2	21344536
Pubmed	Association with Hrs is required for the early endosomal localization, stability, and function of STAM.	STAM HGS	4.91e-06	3	45	2	15113837
Pubmed	A conserved N-terminal motif is required for complex formation between FUS, EWSR1, TAF15 and their oncogenic fusion proteins.	EWSR1 FUS	4.91e-06	3	45	2	23975937
Pubmed	A Subset of Malignant Mesotheliomas in Young Adults Are Associated With Recurrent EWSR1/FUS-ATF1 Fusions.	EWSR1 FUS	4.91e-06	3	45	2	28505004
Pubmed	Aggregation of FET Proteins as a Pathological Change in Amyotrophic Lateral Sclerosis.	EWSR1 FUS	4.91e-06	3	45	2	27311318
Pubmed	m6A enhances the phase separation potential of mRNA.	YTHDF1 YTHDF3	4.91e-06	3	45	2	31292544
Pubmed	FET proteins TAF15 and EWS are selective markers that distinguish FTLD with FUS pathology from amyotrophic lateral sclerosis with FUS mutations.	EWSR1 FUS	4.91e-06	3	45	2	21856723
Pubmed	Unclassified low grade spindle cell sarcoma with storiform pattern characterized by recurrent novel EWSR1/FUS-NACC1 fusions.	EWSR1 FUS	4.91e-06	3	45	2	33859361
Pubmed	Role of FET proteins in neurodegenerative disorders.	EWSR1 FUS	4.91e-06	3	45	2	27415968
Pubmed	Novel FUS-KLF17 and EWSR1-KLF17 fusions in myoepithelial tumors.	EWSR1 FUS	4.91e-06	3	45	2	25706482
Pubmed	EWS/FLI mediates transcriptional repression via NKX2.2 during oncogenic transformation in Ewing's sarcoma.	EWSR1 NKX2-2	4.91e-06	3	45	2	18414662
Pubmed	Six and Eya expression during human somitogenesis and MyoD gene family activation.	EYA1 EYA2	4.91e-06	3	45	2	12500905
Pubmed	Effects of deficiencies of STAMs and Hrs, mammalian class E Vps proteins, on receptor downregulation.	STAM HGS	4.91e-06	3	45	2	13679051
Pubmed	Ewing sarcoma with ERG gene rearrangements: A molecular study focusing on the prevalence of FUS-ERG and common pitfalls in detecting EWSR1-ERG fusions by FISH.	EWSR1 FUS	4.91e-06	3	45	2	26690869
Pubmed	Comprehensive Analysis of YTH Domain Family in Lung Adenocarcinoma: Expression Profile, Association with Prognostic Value, and Immune Infiltration.	YTHDF1 YTHDF3	4.91e-06	3	45	2	34497675
Pubmed	Complex alternative RNA processing generates an unexpected diversity of poly(A) polymerase isoforms.	PAPOLB PAPOLA	4.91e-06	3	45	2	8628305
Pubmed	Cytokeratin-positive Malignant Tumor in the Abdomen With EWSR1/FUS-CREB Fusion: A Clinicopathologic Study of 8 Cases.	EWSR1 FUS	4.91e-06	3	45	2	34049318
Pubmed	O-GlcNAc glycosylation stoichiometry of the FET protein family: only EWS is glycosylated with a high stoichiometry.	EWSR1 FUS	4.91e-06	3	45	2	27903134
Pubmed	Mutations affecting components of the SWI/SNF complex cause Coffin-Siris syndrome.	ARID1B ARID1A	4.91e-06	3	45	2	22426308
Pubmed	Exome sequencing reveals frequent inactivating mutations in ARID1A, ARID1B, ARID2 and ARID4A in microsatellite unstable colorectal cancer.	ARID1B ARID1A	4.91e-06	3	45	2	24382590
Pubmed	FOXO1 is a direct target of EWS-Fli1 oncogenic fusion protein in Ewing's sarcoma cells.	FOXO1 EWSR1	4.91e-06	3	45	2	20933505
Pubmed	Targeted disruption of the synovial sarcoma-associated SS18 gene causes early embryonic lethality and affects PPARBP expression.	SS18 SS18L1	4.91e-06	3	45	2	16926188
Interaction	NUP35 interactions	YTHDF1 NCOA3 RANBP2 EWSR1 ARID1B FUS ILF3 TCF20 ARID1A TFG YTHDF3	1.68e-09	424	45	11	int:NUP35
Interaction	TLE3 interactions	NCOA3 TSHZ3 ARID1B NKX2-2 STAM EYA2 EYA3 TCF20 ARID1A EBF3	8.09e-09	376	45	10	int:TLE3
Interaction	PAX9 interactions	NCOA3 SLAIN1 EWSR1 ARID1B EYA2 TCF20 ARID1A	1.46e-08	130	45	7	int:PAX9
Interaction	FAM168A interactions	YTHDF1 EWSR1 ARID1B LASP1 TFG SS18L1 HGS	2.70e-08	142	45	7	int:FAM168A
Interaction	RBPMS interactions	YTHDF1 PHF1 TOR1AIP2 SLAIN1 EWSR1 LASP1 ILF3 EYA2 TFG	5.17e-08	340	45	9	int:RBPMS
Interaction	SMARCA4 interactions	CDK8 FOXO1 EWSR1 ARID1B FUS EYA1 ARID1A SS18 NR1H4 SS18L1	5.66e-08	462	45	10	int:SMARCA4
Interaction	SOX17 interactions	NCOA3 ARID1B ILF3 TCF20 ARID1A SS18	6.57e-08	95	45	6	int:SOX17
Interaction	SMARCC2 interactions	CDK8 NCOA3 EWSR1 ARID1B FUS EYA1 ARID1A SS18 SS18L1	7.13e-08	353	45	9	int:SMARCC2
Interaction	CSTF2 interactions	PAPOLB EWSR1 FUS PAPOLA TFG SS18L1 HGS	7.58e-08	165	45	7	int:CSTF2
Interaction	SMARCC1 interactions	CDK8 NCOA3 EWSR1 ARID1B FUS EYA1 ARID1A SS18 SS18L1	1.46e-07	384	45	9	int:SMARCC1
Interaction	ALG13 interactions	YTHDF1 NCOA3 ARID1B TCF20 ARID1A UBAP2L YTHDF3	1.54e-07	183	45	7	int:ALG13
Interaction	TBXT interactions	NCOA3 ARID1B TCF20 ARID1A SS18 SS18L1	2.17e-07	116	45	6	int:TBXT
Interaction	FLI1 interactions	EWSR1 ARID1B FUS ARID1A SS18	2.60e-07	62	45	5	int:FLI1
Interaction	PAX7 interactions	NCOA3 TSHZ3 ARID1B ARID1A SS18 SS18L1	3.22e-07	124	45	6	int:PAX7
Interaction	SP7 interactions	NCOA3 TSHZ3 ARID1B EYA3 TCF20 ARID1A SS18 SS18L1	3.25e-07	304	45	8	int:SP7
Interaction	BICRA interactions	EWSR1 ARID1B ARID1A SS18 SS18L1	3.85e-07	67	45	5	int:BICRA
Interaction	GCM1 interactions	YTHDF1 NCOA3 ARID1B ARID1A SS18	4.14e-07	68	45	5	int:GCM1
Interaction	SMG7 interactions	YTHDF1 NCOA3 TSHZ3 ARID1B TCF20 ARID1A UBAP2L YTHDF3	4.68e-07	319	45	8	int:SMG7
Interaction	ERG interactions	NCOA3 ARID1B ILF3 TCF20 ARID1A SS18 SS18L1	5.87e-07	223	45	7	int:ERG
Interaction	VPS37C interactions	YTHDF1 LASP1 ILF3 EYA2 TFG HGS	6.86e-07	141	45	6	int:VPS37C
Interaction	SOX7 interactions	NCOA3 EWSR1 ARID1B TCF20 ARID1A	1.06e-06	82	45	5	int:SOX7
Interaction	IRF4 interactions	NCOA3 ARID1B TCF20 ARID1A SS18	1.27e-06	85	45	5	int:IRF4
Interaction	SMC5 interactions	YTHDF1 RANBP2 EWSR1 ARID1B FUS ILF3 TCF20 ARID1A SS18 UBAP2L YTHDF3 SS18L1	1.31e-06	1000	45	12	int:SMC5
Interaction	CRX interactions	NCOA3 ARID1B TCF20 ARID1A TFG SS18L1 HGS	1.40e-06	254	45	7	int:CRX
Interaction	SS18 interactions	ARID1B FUS ARID1A SS18 SS18L1	1.51e-06	88	45	5	int:SS18
Interaction	MED25 interactions	CDK8 LASP1 EYA2 TFG HGS	1.98e-06	93	45	5	int:MED25
Interaction	UBAP2 interactions	YTHDF1 FUS TFG UBAP2L YTHDF3 HGS	2.05e-06	170	45	6	int:UBAP2
Interaction	DMRTB1 interactions	YTHDF1 SLAIN1 EWSR1 EYA2 YTHDF3	2.09e-06	94	45	5	int:DMRTB1
Interaction	DPF1 interactions	PHF1 ARID1B ARID1A SS18 SS18L1	2.20e-06	95	45	5	int:DPF1
Interaction	TP53BP1 interactions	CDK8 NCOA3 EWSR1 ARID1B FUS ILF3 ARID1A SS18L1 HGS	2.25e-06	533	45	9	int:TP53BP1
Interaction	FMR1 interactions	YTHDF1 PHF1 NCOA3 RANBP2 EWSR1 ILF3 TCF20 UBAP2L YTHDF3	2.35e-06	536	45	9	int:FMR1
Interaction	ARID1A interactions	EWSR1 ARID1B FUS EYA2 ARID1A SS18 SS18L1	2.44e-06	276	45	7	int:ARID1A
Interaction	SS18L1 interactions	ARID1B ARID1A SS18 SS18L1 HGS	2.57e-06	98	45	5	int:SS18L1
Interaction	ARID1B interactions	NCOA3 ARID1B EYA2 ARID1A SS18 SS18L1	2.58e-06	177	45	6	int:ARID1B
Interaction	PPIA interactions	EWSR1 ARID1B FUS ILF3 STAM EYA3 TCF20 ARID1A TFG YTHDF3 HGS	2.93e-06	888	45	11	int:PPIA
Interaction	MAPK1IP1L interactions	EWSR1 TFG SS18L1 HGS	3.02e-06	45	45	4	int:MAPK1IP1L
Interaction	CELF1 interactions	CDK8 YTHDF1 EWSR1 FUS ILF3 UBAP2L YTHDF3	3.23e-06	288	45	7	int:CELF1
Interaction	TLX3 interactions	NCOA3 ARID1B NKX2-2 LASP1 EYA3 TCF20 ARID1A	3.45e-06	291	45	7	int:TLX3
Interaction	CSTF2T interactions	PAPOLB EWSR1 LASP1 PAPOLA HGS	3.61e-06	105	45	5	int:CSTF2T
Interaction	SMARCD3 interactions	ARID1B ARID1A SS18 NR1H4 SS18L1	3.96e-06	107	45	5	int:SMARCD3
Interaction	CREBBP interactions	CDK8 FOXO1 NCOA3 EWSR1 ARID1B FUS ARID1A PAPOLA SS18L1	5.81e-06	599	45	9	int:CREBBP
Interaction	DDIT3 interactions	EWSR1 ARID1B FUS ARID1A SS18	6.95e-06	120	45	5	int:DDIT3
Interaction	EYA2 interactions	ARID1B EYA2 ARID1A TFG HGS	7.24e-06	121	45	5	int:EYA2
Interaction	PRMT5 interactions	CDK8 PHF1 RANBP2 EWSR1 ARID1B FUS ILF3 ARID1A	8.46e-06	471	45	8	int:PRMT5
Interaction	SOX2 interactions	YTHDF1 NCOA3 RANBP2 TSHZ3 EWSR1 ARID1B FUS ILF3 EYA1 TCF20 ARID1A PDLIM1 SS18	8.79e-06	1422	45	13	int:SOX2
Interaction	SNRNP40 interactions	EWSR1 ARID1B FUS ILF3 EYA3 TCF20 ARID1A PDLIM1 PAPOLG	9.53e-06	637	45	9	int:SNRNP40
Interaction	RARA interactions	FOXO1 NCOA3 EWSR1 FUS ARID1A NR1H4	9.75e-06	223	45	6	int:RARA
Interaction	SUZ12 interactions	CDK8 PHF1 NCOA3 RANBP2 EWSR1 FUS ILF3 SS18 MUC4	1.04e-05	644	45	9	int:SUZ12
Interaction	CEBPA interactions	CDK8 NCOA3 RANBP2 EWSR1 ARID1B LASP1 FUS ILF3 EYA3 TCF20 ARID1A EBF3	1.25e-05	1245	45	12	int:CEBPA
Interaction	PHF10 interactions	ARID1B FUS ARID1A SS18 SS18L1	1.42e-05	139	45	5	int:PHF10
Interaction	SMARCB1 interactions	CDK8 ARID1B FUS ARID1A SS18 SS18L1 HGS	1.49e-05	364	45	7	int:SMARCB1
Interaction	C14orf119 interactions	LASP1 FUS TFG UBAP2L	1.50e-05	67	45	4	int:C14orf119
Interaction	SMAD1 interactions	CDK8 EWSR1 TCF20 ARID1A SS18L1 HGS	1.59e-05	243	45	6	int:SMAD1
Interaction	ETV4 interactions	NCOA3 ARID1B ARID1A SS18	1.69e-05	69	45	4	int:ETV4
Interaction	CTDSPL2 interactions	NCOA3 RANBP2 FUS ILF3	1.79e-05	70	45	4	int:CTDSPL2
Interaction	ELF5 interactions	ARID1B ILF3 ARID1A SS18 SS18L1	1.86e-05	147	45	5	int:ELF5
Interaction	ARID2 interactions	ARID1B FUS ARID1A SS18 SS18L1	2.26e-05	153	45	5	int:ARID2
Interaction	EWSR1 interactions	PHF1 NCOA3 EWSR1 FUS ILF3 EYA3 TCF20 ARID1A TFG UBAP2L	2.44e-05	906	45	10	int:EWSR1
Interaction	RNU5B-1 interactions	ILF3 UBAP2L	2.92e-05	4	45	2	int:RNU5B-1
Interaction	SAXO4 interactions	SLAIN1 LASP1 TFG HGS	3.03e-05	80	45	4	int:SAXO4
Interaction	HNF4A interactions	FOXO1 NCOA3 ARID1B ARID1A SS18 SS18L1	3.19e-05	275	45	6	int:HNF4A
Interaction	BICC1 interactions	TFG UBAP2L YTHDF3	3.28e-05	28	45	3	int:BICC1
Interaction	MYCN interactions	YTHDF1 EWSR1 ARID1B FUS ILF3 TCF20 ARID1A TFG SS18 UBAP2L YTHDF3 SS18L1	3.33e-05	1373	45	12	int:MYCN
Interaction	STK11IP interactions	ARID1B ARID1A SS18 SS18L1	3.50e-05	83	45	4	int:STK11IP
Interaction	CEP85 interactions	YTHDF1 EWSR1 EYA2 UBAP2L YTHDF3	3.64e-05	169	45	5	int:CEP85
Interaction	EPHA8 interactions	YTHDF1 STAM TFG YTHDF3 HGS	3.64e-05	169	45	5	int:EPHA8
Interaction	SIX2 interactions	EYA1 EYA2 EYA3	3.65e-05	29	45	3	int:SIX2
Interaction	MED30 interactions	CDK8 MED12L SS18L1 HGS	3.67e-05	84	45	4	int:MED30
Interaction	R3HDM1 interactions	YTHDF1 EWSR1 UBAP2L YTHDF3	3.67e-05	84	45	4	int:R3HDM1
Interaction	SMARCE1 interactions	NCOA3 EWSR1 ARID1B ARID1A SS18 SS18L1	4.04e-05	287	45	6	int:SMARCE1
Interaction	RNF43 interactions	RANBP2 ILF3 STAM TCF20 ARID1A TAB3 HGS	4.13e-05	427	45	7	int:RNF43
Interaction	TLX1 interactions	NCOA3 ARID1B EYA3 TCF20 ARID1A	4.30e-05	175	45	5	int:TLX1
Interaction	CUL2 interactions	SLAIN1 RANBP2 EWSR1 ARID1B FUS ILF3 ARID1A TFG	4.32e-05	591	45	8	int:CUL2
Interaction	UBAP2L interactions	YTHDF1 FOXO1 EWSR1 FUS UBAP2L YTHDF3	4.99e-05	298	45	6	int:UBAP2L
Interaction	HNRNPF interactions	CDK8 FOXO1 SLAIN1 RANBP2 EWSR1 LASP1 FUS TFG	5.21e-05	607	45	8	int:HNRNPF
Interaction	FOXI1 interactions	NCOA3 ARID1B ARID1A HGS	5.25e-05	92	45	4	int:FOXI1
Interaction	CEBPB interactions	CDK8 YTHDF1 FOXO1 RANBP2 TSHZ3 EWSR1 NKX2-2 LASP1 ILF3 TCF20 UBAP2L YTHDF3	5.42e-05	1443	45	12	int:CEBPB
Interaction	SMAD3 interactions	CDK8 FOXO1 NCOA3 ARID1B ARID1A SS18L1 HGS	5.52e-05	447	45	7	int:SMAD3
Interaction	UBQLN2 interactions	EWSR1 LASP1 FUS STAM EYA3 TFG SS18 TAB3 HGS	5.57e-05	797	45	9	int:UBQLN2
Interaction	KRTAP26-1 interactions	YTHDF1 LASP1 TFG HGS	5.71e-05	94	45	4	int:KRTAP26-1
Interaction	DPF3 interactions	ARID1B ARID1A SS18 SS18L1	5.95e-05	95	45	4	int:DPF3
Interaction	BCL7B interactions	ARID1B ARID1A SS18 SS18L1	5.95e-05	95	45	4	int:BCL7B
Interaction	TRIM31 interactions	YTHDF1 EWSR1 FUS ILF3 SS18 UBAP2L SS18L1	6.09e-05	454	45	7	int:TRIM31
Interaction	MYOD1 interactions	NCOA3 ARID1B ARID1A SS18 SS18L1	7.02e-05	194	45	5	int:MYOD1
Interaction	KLF5 interactions	NCOA3 ARID1B ARID1A SS18 YTHDF3	7.19e-05	195	45	5	int:KLF5
Interaction	WWP2 interactions	EWSR1 ARID1B ILF3 STAM ARID1A UBAP2L YTHDF3 TAB3 HGS	8.35e-05	840	45	9	int:WWP2
Interaction	DACH1 interactions	FOXO1 EWSR1 EYA1 EYA3	8.47e-05	104	45	4	int:DACH1
Interaction	FEV interactions	NCOA3 ARID1B TCF20 ARID1A SS18L1	8.69e-05	203	45	5	int:FEV
Interaction	DTX2 interactions	NCOA3 EWSR1 LASP1 EYA2 TCF20 HGS	8.76e-05	330	45	6	int:DTX2
Interaction	BMI1 interactions	YTHDF1 RANBP2 EWSR1 FUS ILF3 UBAP2L YTHDF3 SS18L1	9.26e-05	659	45	8	int:BMI1
Interaction	NR5A2 interactions	NCOA3 ILF3 NR1H4	1.05e-04	41	45	3	int:NR5A2
Interaction	SF3B4 interactions	YTHDF1 EWSR1 FUS ILF3 TFG SS18L1	1.07e-04	342	45	6	int:SF3B4
Interaction	TDRD3 interactions	YTHDF1 EWSR1 FUS UBAP2L YTHDF3	1.07e-04	212	45	5	int:TDRD3
Interaction	PAX8 interactions	NCOA3 ARID1B ARID1A SS18L1	1.09e-04	111	45	4	int:PAX8
Interaction	DPF2 interactions	ARID1B LASP1 ARID1A SS18 SS18L1 PAPOLG	1.19e-04	349	45	6	int:DPF2
Interaction	SMARCD1 interactions	ARID1B FUS ARID1A SS18 NR1H4 SS18L1	1.19e-04	349	45	6	int:SMARCD1
Interaction	BCL7C interactions	ARID1B ARID1A SS18 SS18L1	1.25e-04	115	45	4	int:BCL7C
Interaction	BRD9 interactions	ARID1B ARID1A SS18 SS18L1	1.34e-04	117	45	4	int:BRD9
Interaction	PSMB11 interactions	ILF3 HGS	1.35e-04	8	45	2	int:PSMB11
Interaction	PABPC1 interactions	YTHDF1 FOXO1 PAPOLB FUS ILF3 PAPOLA UBAP2L YTHDF3	1.39e-04	699	45	8	int:PABPC1
Cytoband	Ensembl 112 genes in cytogenetic band chr20q13	YTHDF1 NCOA3 EYA2 SS18L1	7.79e-04	422	45	4	chr20q13
GeneFamily	EYA transcriptional coactivator and phosphatases	EYA1 EYA2 EYA3	1.33e-08	4	28	3	1044
GeneFamily	Zinc fingers RANBP2-type \|RNA binding motif containing	RANBP2 EWSR1 FUS TAB3	2.70e-08	21	28	4	89
GeneFamily	ESCRT-0	STAM HGS	6.93e-06	3	28	2	1115
GeneFamily	AT-rich interaction domain containing	ARID1B ARID1A	2.40e-04	15	28	2	418
GeneFamily	Cyclins\|Mediator complex	CDK8 MED12L	1.19e-03	33	28	2	1061
GeneFamily	LIM domain containing	LASP1 PDLIM1	3.75e-03	59	28	2	1218
GeneFamily	PHD finger proteins	PHF1 KMT2E	8.52e-03	90	28	2	88
Coexpression	NAKAYA_PBMC_FLUARIX_FLUVIRIN_AGE_18_50YO_3DY_DN	YTHDF1 PHF1 RANBP2 FUS ILF3 STAM PAPOLA UBAP2L	6.45e-07	432	45	8	M41149
Coexpression	GRESHOCK_CANCER_COPY_NUMBER_UP	FOXO1 EWSR1 LASP1 FUS TFG SS18 SS18L1	1.23e-06	323	45	7	M9150
Coexpression	DOUGLAS_BMI1_TARGETS_UP	ARID1B NKX2-2 ILF3 EYA2 TMEM184B SS18 SS18L1 CDON	4.62e-06	563	45	8	M15103
Coexpression	GSE27896_HDAC6_KO_VS_WT_TREG_UP	ARID1B EYA2 KMT2E PAPOLA SS18L1	1.27e-05	176	45	5	M8248
Coexpression	NAKAYA_PBMC_FLUMIST_AGE_18_50YO_3DY_DN	FOXO1 PHF1 SLAIN1 RANBP2 STAM TFG UBAP2L TAB3	1.82e-05	680	45	8	M41089
Coexpression	TABULA_MURIS_SENIS_MESENTERIC_ADIPOSE_TISSUE_MESENCHYMAL_STEM_CELL_OF_ADIPOSE_AGEING	PHF1 NCOA3 EWSR1 LASP1 FUS EYA2 ARID1A PDLIM1	1.92e-05	685	45	8	MM3782
Coexpression	GSE15733_BM_VS_SPLEEN_MEMORY_CD4_TCELL_DN	FOXO1 TOR1AIP2 ARID1B PDLIM1 CDON	2.29e-05	199	45	5	M3569
Coexpression	GSE17721_0.5H_VS_4H_CPG_BMDC_DN	YTHDF1 TOR1AIP2 EYA3 TFG VNN2	2.35e-05	200	45	5	M4125
Coexpression	XIE_TRASTUZUMAB_CARDIOTOXICITY_MMU_MIR_329_3P_GENES	ARID1B CSMD2 SS18	2.98e-05	35	45	3	MM17501
Coexpression	GENTILE_UV_RESPONSE_CLUSTER_D5	NCOA3 STAM SS18	2.98e-05	35	45	3	M13814
Coexpression	GRYDER_PAX3FOXO1_ENHANCERS_IN_TADS	FOXO1 TOR1AIP2 TSHZ3 EWSR1 EYA1 EYA2 TCF20 ARID1A CDON	4.55e-05	1009	45	9	M157
Coexpression	GRYDER_PAX3FOXO1_ENHANCERS_KO_DOWN	TSHZ3 EYA1 EYA2 TCF20 ARID1A CDON	9.87e-05	438	45	6	M227
Coexpression	ZHOU_PANCREATIC_BETA_CELL	FOXO1 NKX2-2	1.57e-04	11	45	2	MM1247
Coexpression	ZHOU_PANCREATIC_BETA_CELL	FOXO1 NKX2-2	1.57e-04	11	45	2	M1863
Coexpression	BANDRES_RESPONSE_TO_CARMUSTIN_MGMT_48HR_DN	CDK8 NKX2-2 STAM PCDHGC3	1.64e-04	160	45	4	M9556
Coexpression	GSE37301_HEMATOPOIETIC_STEM_CELL_VS_RAG2_KO_NK_CELL_UP	FOXO1 TCF20 PDLIM1 SS18	2.26e-04	174	45	4	M8885
Coexpression	GSE3565_CTRL_VS_LPS_INJECTED_SPLENOCYTES_DN	FOXO1 NCOA3 EYA2 TCF20	2.31e-04	175	45	4	M6328
Coexpression	BENPORATH_NOS_TARGETS	FOXO1 ARID1B FUS TCF20	2.52e-04	179	45	4	M14573
Coexpression	XIE_TRASTUZUMAB_CARDIOTOXICITY_MMU_MIR_669C_3P_GENES	FUS EYA1 CSMD2 PAPOLA	2.74e-04	183	45	4	MM17506
Coexpression	GSE5099_DAY3_VS_DAY7_MCSF_TREATED_MACROPHAGE_DN	ARID1B USP9Y ARID1A PAPOLG	2.80e-04	184	45	4	M6593
Coexpression	GSE16385_IFNG_TNF_VS_ROSIGLITAZONE_STIM_MACROPHAGE_UP	TSHZ3 PAPOLA TFG PAPOLG	2.91e-04	186	45	4	M8012
Coexpression	HEVNER_VENTRICULAR_ZONE_AND_UP_NEURON_FATE_COMMITTED_CELLS	ARID1B SS18L1	2.98e-04	15	45	2	MM410
Coexpression	GSE21927_SPLENIC_VS_TUMOR_MONOCYTES_FROM_C26GM_TUMOROUS_MICE_BALBC_UP	CDK8 TCF20 KMT2E TMEM184B	3.42e-04	194	45	4	M7587
Coexpression	GSE29617_CTRL_VS_DAY3_TIV_FLU_VACCINE_PBMC_2008_UP	PHF1 RANBP2 ILF3 EBF3	3.55e-04	196	45	4	M4928
Coexpression	GSE20152_SPHK1_KO_VS_HTNFA_OVEREXPRESS_ANKLE_UP	EYA1 PDLIM1 TMEM184B TFG	3.62e-04	197	45	4	M7682
Coexpression	GSE2770_IL12_AND_TGFB_ACT_VS_ACT_CD4_TCELL_2H_UP	NCOA3 LASP1 FUS EYA3	3.62e-04	197	45	4	M6125
Coexpression	GSE22886_IGG_IGA_MEMORY_BCELL_VS_BLOOD_PLASMA_CELL_DN	STAM TMEM184B TFG SS18	3.69e-04	198	45	4	M4446
Coexpression	GSE13484_UNSTIM_VS_3H_YF17D_VACCINE_STIM_PBMC_UP	AP1AR TCF20 UBAP2L PAPOLG	3.76e-04	199	45	4	M3257
Coexpression	GSE43863_DAY6_EFF_VS_DAY150_MEM_TFH_CD4_TCELL_UP	ILF3 KMT2E TMEM184B PAPOLG	3.76e-04	199	45	4	M9745
Coexpression	GSE15767_MED_VS_SCS_MAC_LN_DN	CDK8 FOXO1 SS18 CDON	3.76e-04	199	45	4	M3585
Coexpression	GSE2405_HEAT_KILLED_VS_LIVE_A_PHAGOCYTOPHILUM_STIM_NEUTROPHIL_9H_UP	LASP1 PAPOLA SS18 HGS	3.76e-04	199	45	4	M6194
Coexpression	GSE43863_DAY6_EFF_VS_DAY150_MEM_LY6C_INT_CXCR5POS_CD4_TCELL_UP	PHF1 LASP1 KMT2E PAPOLG	3.84e-04	200	45	4	M9748
Coexpression	GSE15930_NAIVE_VS_24H_IN_VITRO_STIM_CD8_TCELL_UP	PHF1 NCOA3 EYA2 TCF20	3.84e-04	200	45	4	M3587
Coexpression	GSE15930_NAIVE_VS_24H_IN_VITRO_STIM_IL12_CD8_TCELL_UP	PHF1 NCOA3 EYA2 TCF20	3.84e-04	200	45	4	M3589
Coexpression	GSE15930_NAIVE_VS_24H_IN_VITRO_STIM_INFAB_CD8_TCELL_UP	PHF1 NCOA3 EYA2 TCF20	3.84e-04	200	45	4	M3593
Coexpression	GSE5099_MONOCYTE_VS_CLASSICAL_M1_MACROPHAGE_DN	CDK8 EWSR1 FUS ILF3	3.84e-04	200	45	4	M6587
Coexpression	GSE39152_BRAIN_VS_SPLEEN_CD103_NEG_MEMORY_CD8_TCELL_UP	CDK8 TOR1AIP2 AP1AR LASP1	3.84e-04	200	45	4	M9075
Coexpression	GSE15930_NAIVE_VS_72H_IN_VITRO_STIM_IL12_CD8_TCELL_UP	PHF1 TOR1AIP2 NCOA3 TCF20	3.84e-04	200	45	4	M3608
Coexpression	GSE15930_NAIVE_VS_72H_IN_VITRO_STIM_IFNAB_CD8_TCELL_UP	PHF1 NCOA3 EYA2 TCF20	3.84e-04	200	45	4	M3612
Coexpression	GSE44649_NAIVE_VS_ACTIVATED_CD8_TCELL_MIR155_KO_UP	YTHDF1 TOR1AIP2 ILF3 TAB3	3.84e-04	200	45	4	M9776
Coexpression	GSE37301_LYMPHOID_PRIMED_MPP_VS_COMMON_LYMPHOID_PROGENITOR_DN	MED12L YTHDF1 FUS UBAP2L	3.84e-04	200	45	4	M8854
Coexpression	GSE2770_IL4_ACT_VS_ACT_CD4_TCELL_2H_UP	SLAIN1 LASP1 STAM PDLIM1	3.84e-04	200	45	4	M6094
CoexpressionAtlas	FacebaseRNAseq_e10.5_Olfactory Pit_top-relative-expression-ranked_500	MED12L SLAIN1 EYA1 EYA2 PDLIM1 EBF3 MUC4 CDON	8.32e-06	495	45	8	Facebase_RNAseq_e10.5_Olfactory Pit_500
CoexpressionAtlas	FacebaseRNAseq_e10.5_Olfactory Pit_top-relative-expression-ranked_500_k-means-cluster#1	EYA1 EBF3 MUC4 CDON	6.93e-05	104	45	4	Facebase_RNAseq_e10.5_Olfactory Pit_500_K1
ToppCell	pdx\|World / Sample and Cell Type and Tumor Cluster (all cells)	NCOA3 ARID1B FUS TCF20 ARID1A	1.22e-06	186	45	5	de8e538c8767d41b8a52f5e58ba1affd4e7244c4
ToppCell	pdx-Tumor_cells\|World / Sample and Cell Type and Tumor Cluster (all cells)	NCOA3 ARID1B FUS TCF20 ARID1A	1.22e-06	186	45	5	0b88a87158a9ca8de3bf40a4ff1687150707a5f0
ToppCell	droplet-Marrow-BM-1m\|Marrow / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation	CDK8 YTHDF1 EWSR1 FUS TFG	1.54e-06	195	45	5	637b06ef3967b03f7165d102d316e8b7161a817d
ToppCell	ILEUM-non-inflamed-(3)_MNP-(3)_moDC\|(3)_MNP / shred on tissue, inflammation_status, cell class(v3), cell subclass (v2)	NCOA3 FUS KMT2E PAPOLG	1.05e-05	135	45	4	b7a792a7c0c22d8b703509f134115f0e394d7de0
ToppCell	TCGA-Ovary-Primary_Tumor-Ovarian_Carcinoma-Serous_Cystadenocarcinoma-5\|TCGA-Ovary / Sample_Type by Project: Shred V9	ARID1B KMT2E ARID1A UBAP2L	2.37e-05	166	45	4	32d2eaf8a5d03881bf74d680825af2d5110b082d
ToppCell	Control-Epithelial_cells-Airway_basal\|Control / group, cell type (main and fine annotations)	TSHZ3 EYA1 EYA2 MUC4	2.66e-05	171	45	4	3965ced4be6db14265a90673502fceee425837ca
ToppCell	Adult-Epithelial-basal_cell-D231\|Adult / Lineage, Cell type, age group and donor	MED12L EYA1 EYA2 CDON	2.84e-05	174	45	4	a4f98afe7d1cc2617f6f7bc8092c41df57474b30
ToppCell	nucseq-Epithelial-Epithelial_Airway-Basal/Suprabasal-Basal\|nucseq / Celltype signatures by Technology, Lineage, Lineage_subclass, Celltype_group, Cell_type2	TSHZ3 EYA1 EYA2 MUC4	3.04e-05	177	45	4	ce86dfaeb74d995a19aea62f0fb15c4c0bb854b0
ToppCell	nucseq-Epithelial-Epithelial_Airway-Basal/Suprabasal\|nucseq / Celltype signatures by Technology, Lineage, Lineage_subclass, Celltype_group, Cell_type2	TSHZ3 EYA1 EYA2 MUC4	3.04e-05	177	45	4	cbad1a23851151dbef01ea2af960e6f0944f838b
ToppCell	Adult-Epithelial-club_cell-D231\|Adult / Lineage, Cell type, age group and donor	EYA1 EYA2 MUC4 CDON	3.77e-05	187	45	4	ee59d7d3de5879738ff0b9c3ea5e4847fb48cb86
ToppCell	3'-Child04-06-SmallIntestine-Hematopoietic-B_cells-LZ_GC_cell\|Child04-06 / Celltypes from developing, pediatric, Crohn's, & adult GI tract	MED12L NCOA3 EYA3 VNN2	4.44e-05	195	45	4	cccc9c70bb8f6df8c6ab94534c17475af1d3e224
ToppCell	Bronchial-NucSeq-Epithelial-Epi_airway_basal-Basal\|NucSeq / Cell types per location group and 10X technology with lineage, and cell group designations	TSHZ3 EYA1 EYA2 MUC4	4.62e-05	197	45	4	1e915957ea6a4550ecb9d6ee4b232aa5800faf20
ToppCell	Tracheal-NucSeq-Epithelial-Epi_airway_basal\|NucSeq / Cell types per location group and 10X technology with lineage, and cell group designations	EYA1 EYA2 PDLIM1 MUC4	4.71e-05	198	45	4	5374b0e98d669f36a0571d3c006c7bd5e3c8e87f
ToppCell	10x3'2.3-week_17-19-Lymphocytic_B-B_lineage-pre_B_progenitor\|week_17-19 / cell types per 3 fetal stages;per 3',per 5'	ARID1B FUS KMT2E PDLIM1	4.80e-05	199	45	4	dd94e42b62af7cbd69c472681d3c758552694ae2
ToppCell	Tracheal-NucSeq-Epithelial-Epi_airway_basal-Basal\|NucSeq / Cell types per location group and 10X technology with lineage, and cell group designations	EYA1 EYA2 PDLIM1 MUC4	4.80e-05	199	45	4	94a7867e800df352731796de8c24cba133c29622
ToppCell	Fetal_brain-fetalBrain_Zhong_nature-GW10\|fetalBrain_Zhong_nature / Sample Type, Dataset, Time_group, and Cell type.	FUS EYA2 VNN2 CDON	4.80e-05	199	45	4	8e72efcd421639ac36ed036ee13f13de070d361f
ToppCell	Bronchial-NucSeq-Epithelial-Epi_airway_basal-Suprabasal\|NucSeq / Cell types per location group and 10X technology with lineage, and cell group designations	TSHZ3 EYA1 EYA2 MUC4	4.80e-05	199	45	4	f5c3561744e2a0e7716657cb521acb1d8f054b41
ToppCell	TCGA-Bile_Duct-Primary_Tumor\|TCGA-Bile_Duct / Sample_Type by Project: Shred V9	YTHDF1 FUS ILF3 HGS	4.89e-05	200	45	4	0350e5ffd36033099b7e32a1fdd790fff99790dc
ToppCell	Bronchial-NucSeq-Epithelial-Epi_airway_basal\|NucSeq / Cell types per location group and 10X technology with lineage, and cell group designations	TSHZ3 EYA1 EYA2 MUC4	4.89e-05	200	45	4	8827653738a931e4a4545e0c7d75be12bed40740
ToppCell	TCGA-Bile_Duct-Primary_Tumor-Cholangiocarcinoma\|TCGA-Bile_Duct / Sample_Type by Project: Shred V9	YTHDF1 FUS ILF3 HGS	4.89e-05	200	45	4	ad2a6da0b1ae7a9212a3c91e5eec4baa7481d8dc
ToppCell	frontal_cortex-Neuronal-glutamatergic_neuron-CR-CR_Lhx5\|frontal_cortex / Per Region, Lineage, Cell class, Cell type, Cell subtype	EYA1 EYA2 EBF3	9.03e-05	86	45	3	2990429ed4438f41ff03f4a9cae8863a528fdd81
ToppCell	frontal_cortex-Neuronal-glutamatergic_neuron-CR\|frontal_cortex / Per Region, Lineage, Cell class, Cell type, Cell subtype	EYA1 EYA2 EBF3	9.03e-05	86	45	3	97467708c90a4bd49deafe3e2ec495c56b448ce1
Disease	eye disease (implicated_via_orthology)	EYA1 EYA2 EYA3	6.17e-08	6	44	3	DOID:5614 (implicated_via_orthology)
Disease	branchiootorenal syndrome (implicated_via_orthology)	EYA1 EYA2 EYA3	1.08e-07	7	44	3	DOID:14702 (implicated_via_orthology)
Disease	amyotrophic lateral sclerosis type 6 (implicated_via_orthology)	EWSR1 FUS	6.51e-06	3	44	2	DOID:0060198 (implicated_via_orthology)
Disease	Extraskeletal Myxoid Chondrosarcoma	EWSR1 TFG	2.17e-05	5	44	2	C1275278
Disease	MENTAL RETARDATION, AUTOSOMAL DOMINANT 12	ARID1B ARID1A	2.17e-05	5	44	2	C3281201
Disease	neuroblastoma (is_implicated_in)	ARID1B ARID1A	9.71e-05	10	44	2	DOID:769 (is_implicated_in)
Disease	frontotemporal dementia (implicated_via_orthology)	EWSR1 FUS	1.42e-04	12	44	2	DOID:9255 (implicated_via_orthology)
Disease	cholangiocarcinoma (biomarker_via_orthology)	MUC4 NR1H4	1.68e-04	13	44	2	DOID:4947 (biomarker_via_orthology)
Disease	Coffin-Siris syndrome	ARID1B ARID1A	1.68e-04	13	44	2	C0265338
Disease	Abnormal behavior	CDK8 MED12L	2.57e-04	16	44	2	C0233514
Disease	disease of metabolism (implicated_via_orthology)	YTHDF1 YTHDF3	4.48e-04	21	44	2	DOID:0014667 (implicated_via_orthology)
Disease	Intellectual Disability	CDK8 MED12L TCF20 KMT2E TFG	5.21e-04	447	44	5	C3714756
Disease	allergic disease	FOXO1 ARID1B STAM EYA2	5.89e-04	258	44	4	MONDO_0005271
Disease	amyotrophic lateral sclerosis (implicated_via_orthology)	EWSR1 FUS	9.21e-04	30	44	2	DOID:332 (implicated_via_orthology)
Disease	eicosapentaenoic acid measurement	TSHZ3 PAPOLG	9.83e-04	31	44	2	EFO_0007760
Disease	Global developmental delay	CDK8 TCF20 KMT2E	1.04e-03	133	44	3	C0557874
Disease	lysophosphatidylcholine 20:4 measurement	EYA2 EBF3	1.05e-03	32	44	2	EFO_0010363
Disease	posterior thigh muscle fat infiltration measurement	EYA1 EYA2	1.25e-03	35	44	2	EFO_0020934

Protein segments in the cluster

Peptide	Gene	Start	Entry
YTAQPTQGYAQTTQA	EWSR1	21	Q01844
QNTYGQPSSYGQQSS	EWSR1	211	Q01844
QPSSYGQQSSYGQQS	EWSR1	216	Q01844
PSQYSQQSSSYGQQS	EWSR1	251	Q01844
LSPNYPQNYTSGQIC	CSMD2	1631	Q7Z408
QAQYLPSQSQQRYQP	ARID1B	696	Q8NFD5
QYHPSNNGEYQSSGP	AP1AR	136	Q63HQ0
YFNYNVQQTSTNPPL	RANBP2	961	P49792
SETAYPGQTQYQTLQ	EYA3	86	Q99504
PGQTQYQTLQQTQPY	EYA3	91	Q99504
YSQYSNVQFPQVQPQ	NR1H4	56	Q96RI1
YSQPQAQSPYQQQQP	ARID1A	551	O14497
IITPAYPQQNSTYNV	PAPOLB	316	Q9NRJ5
NYEQANATLNQYPPS	MUC4	4941	Q99102
QPSGYVQQQASPYLQ	MED12L	1991	Q86YW9
AYPTQPGQGYSQQSS	FUS	16	P35637
SQQSSQPYGQQSYSG	FUS	26	P35637
SYGQPQSGSYSQQPS	FUS	121	P35637
QSGSYSQQPSYGGQQ	FUS	126	P35637
PPQGYGQQNQYNSSS	FUS	151	P35637
YQQPQQQPVAQSYGG	LASP1	171	Q14847
SQQDYPSYPSFGQGQ	EYA1	211	Q99502
PPSSSYYQNQQPSAN	KMT2E	1551	Q8IZD2
NDNPPQSSQSSYDVY	PCDHGC3	451	Q9UN70
ITPAYPQQNSTYNVS	PAPOLA	316	P51003
TPAYPQQNSTYNVST	PAPOLG	316	Q9BWT3
NTSLNSPSPNYQKYT	FOXO1	411	Q12778
PSSNNNTPIQGFYIY	CDON	851	Q4KMG0
SHQGQQQSYNQSPYS	ILF3	751	Q12906
QQSYNQSPYSNYGPP	ILF3	756	Q12906
NQPYYSNTPAGLQKN	ENAM	806	Q9NRM1
GYVPSSTPQQSNYNT	EBF3	471	Q9H4W6
GYSATSQQPPQYSHQ	CDK8	446	P49336
TNQYNNPAGLYSSEN	PDLIM1	141	O00151
PSPNQSYQGSSGYNF	PHF1	421	O43189
QTQYSAGIQQATPYT	EYA2	71	O00167
NSYYSSPAQQVPKNP	TOR1AIP2	236	Q8NFQ8
HQQNYQPSQYSPKQQ	TAB3	271	Q8N5C8
YQQYTQQSTLEPGPT	TMEM184B	361	Q9Y519
PGMQSPSSYQNNNYG	NCOA3	446	Q9Y6Q9
QQQQYYSPQAQTPDQ	SLAIN1	376	Q8ND83
QYNAQYSSASTPQYP	NKX2-2	246	O95096
TYSQQQYPSQQSYPG	SS18L1	326	O75177
STCPPNGYFQYNTNV	VNN2	151	O95498
EPYLSSQTNQSNSYP	YTHDF3	36	Q7Z739
YQSGPIQSTTYTSQN	UBAP2L	571	Q14157
QYSASYSQQTGPQQP	TFG	271	Q92734
NSQYGQQQDAYQGPP	SS18	326	Q15532
SSYQPTPTAGYQNVA	HGS	661	O14964
SSVQGNTYPSQAPVY	STAM	466	Q92783
PQYSYNNWSPPVQSN	USP9Y	2436	O00507
YTGPFSPGSAQYQQQ	TCF20	156	Q9UGU0
SNPYITPNNRYGHQN	TSHZ3	356	Q63HK5
PYLTGQSNQSNSYPS	YTHDF1	36	Q9BYJ9
QSNQSNSYPSMSDPY	YTHDF1	41	Q9BYJ9