Cluster composition

Functions

CategoryNameIntersectionWithQueryPValueGenesInTermGenesInQueryGenesInTermInQueryID
GeneOntologyMolecularFunctionpre-mRNA 3'-splice site binding

ZRSR2P1 ZRSR2

6.23e-057352GO:0030628
GeneOntologyMolecularFunctionRNA polymerase II intronic transcription regulatory region sequence-specific DNA binding

VAX1 HIVEP1

2.30e-0413352GO:0001162
GeneOntologyMolecularFunctionintronic transcription regulatory region sequence-specific DNA binding

VAX1 HIVEP1

3.99e-0417352GO:0001161
GeneOntologyCellularComponentU2AF complex

ZRSR2P1 ZRSR2

6.02e-057362GO:0089701
GeneOntologyCellularComponentU12-type spliceosomal complex

ZRSR2P1 ZRSR2

1.22e-0330362GO:0005689
GeneOntologyCellularComponentpericentric heterochromatin

BAZ1B UHRF2

1.38e-0332362GO:0005721
DomainU2AF_small

ZRSR2P1 ZRSR2

3.60e-055362IPR009145
DomainZF_PHD_2

BAZ1B UHRF2 ASXL3

8.06e-0495363PS50016
DomainZF_PHD_1

BAZ1B UHRF2 ASXL3

8.31e-0496363PS01359
DomainGrowth_fac_rcpt_

HMCN1 DLL1 GPR179

3.33e-03156363IPR009030
DomainZnF_C3H1

ZRSR2P1 ZRSR2

3.85e-0348362SM00356
Domainzf-CCCH

ZRSR2P1 ZRSR2

4.01e-0349362PF00642
DomainUbiquitin-rel_dom

PTPN13 ARHGAP20 UHRF2

5.29e-03184363IPR029071
DomainZnf_CCCH

ZRSR2P1 ZRSR2

5.58e-0358362IPR000571
Domainig

TMIGD1 HMCN1 IGHE

5.78e-03190363PF00047
DomainImmunoglobulin

TMIGD1 HMCN1 IGHE

5.78e-03190363IPR013151
DomainTSP_1

HMCN1 SPON1

6.55e-0363362PF00090
DomainTSP1

HMCN1 SPON1

6.96e-0365362SM00209
DomainTSP1_rpt

HMCN1 SPON1

6.96e-0365362IPR000884
DomainTSP1

HMCN1 SPON1

6.96e-0365362PS50092
Domain-

HMCN1 CFB

8.94e-03743623.40.50.410
DomainPHD

BAZ1B UHRF2

9.18e-0375362PF00628
DomainZnf_PHD-finger

BAZ1B UHRF2

1.01e-0279362IPR019787
DomainEGF

HMCN1 DLL1 GPR179

1.03e-02235363SM00181
DomainVWFA

HMCN1 CFB

1.09e-0282362PS50234
DomainVWA

HMCN1 CFB

1.14e-0284362SM00327
Pubmed

Zrsr2 and functional U12-dependent spliceosome are necessary for follicular development.

ZRSR2P1 ZRSR2

1.04e-06236235198906
Pubmed

ZRSR1 co-operates with ZRSR2 in regulating splicing of U12-type introns in murine hematopoietic cells.

ZRSR2P1 ZRSR2

1.04e-06236233691379
Pubmed

Isolation and mapping of human homologues of an imprinted mouse gene U2af1-rs1.

ZRSR2P1 ZRSR2

3.12e-0633628586425
Pubmed

Concurrent Zrsr2 mutation and Tet2 loss promote myelodysplastic neoplasm in mice.

ZRSR2P1 ZRSR2

3.12e-06336236030305
Pubmed

Mouse U2af1-rs1 is a neomorphic imprinted gene.

ZRSR2P1 ZRSR2

6.24e-0643629001233
Pubmed

Delta-like1-induced Notch1 signaling regulates the human plasmacytoid dendritic cell versus T-cell lineage decision through control of GATA-3 and Spi-B.

SPIB DLL1

6.24e-06436216317090
Pubmed

Cloning and mapping of the U2af1-rs2 gene with a high transmission distortion in interspecific backcross progeny.

ZRSR2P1 ZRSR2

6.24e-0643627558001
Pubmed

Minor intron retention drives clonal hematopoietic disorders and diverse cancer predisposition.

ZRSR2P1 ZRSR2

1.56e-05636233846634
Pubmed

Resolution of cell fate decisions revealed by single-cell gene expression analysis from zygote to blastocyst.

MYT1L BAZ1B OTX1 HIVEP1 DLL1 UHRF2 RBAK

1.65e-0580836720412781
Pubmed

A protein related to splicing factor U2AF35 that interacts with U2AF65 and SR proteins in splicing of pre-mRNA.

ZRSR2P1 ZRSR2

2.18e-0573629237760
Pubmed

Allelic variants between mouse substrains BALB/cJ and BALB/cByJ influence mononuclear cardiomyocyte composition and cardiomyocyte nuclear ploidy.

ZRSR2P1 ZRSR2

2.91e-05836232371981
Pubmed

Chr21 protein-protein interactions: enrichment in proteins involved in intellectual disability, autism, and late-onset Alzheimer's disease.

MYT1L PTPN13 IDS ZRSR2 PGK1 MED13 TTLL5 ZNF329

4.08e-05128536835914814
Pubmed

Pax6 modulates the dorsoventral patterning of the mammalian telencephalon.

VAX1 OTX1

9.41e-051436211050125
Pubmed

Prediction of the coding sequences of mouse homologues of KIAA gene: I. The complete nucleotide sequences of 100 mouse KIAA-homologous cDNAs identified by screening of terminal sequences of cDNA clones randomly sampled from size-fractionated libraries.

MYT1L ZNF142 TTLL5

1.02e-048736312465718
Pubmed

Wnt antagonism of Shh facilitates midbrain floor plate neurogenesis.

OTX1 SPON1

1.24e-041636219122665
Pubmed

Comparative mapping of the imprinted U2afbpL gene on mouse chromosome 11 and human chromosome 5.

ZRSR2P1 ZRSR2

1.40e-04173627956352
Pubmed

Substrate trapping proteomics reveals targets of the βTrCP2/FBXW11 ubiquitin ligase.

PTPN13 HIVEP1 HMCN1

3.18e-0412836325332235
Pubmed

Protein interactome mining defines melatonin MT1 receptors as integral component of presynaptic protein complexes of neurons.

BAZ1B OTX1 PTPN13 DLL1

3.36e-0432236426514267
Pubmed

Gene expression is dynamically regulated in retinal progenitor cells prior to and during overt cellular differentiation.

OTX1 DLL1

3.60e-042736224148613
Pubmed

The in vivo Interaction Landscape of Histones H3.1 and H3.3.

BAZ1B HIVEP1 THOC3 UHRF2 RBAK

3.87e-0460836536089195
Pubmed

Minor Splicing Factors Zrsr1 and Zrsr2 Are Essential for Early Embryo Development and 2-Cell-Like Conversion.

ZRSR2P1 ZRSR2

4.16e-042936232527007
Pubmed

The transcriptome of human CD34+ hematopoietic stem-progenitor cells.

SPIB TTLL5

4.45e-043036219416867
Pubmed

Transdifferentiation of the retina into pigmented cells in ocular retardation mice defines a new function of the homeodomain gene Chx10.

OTX1 DLL1

4.45e-043036215459106
Pubmed

Interaction network of human early embryonic transcription factors.

BAZ1B HIVEP1 UHRF2 ASXL3

4.65e-0435136438297188
Pubmed

Discovery and validation of genes driving drug-intake and related behavioral traits in mice.

HTR1A CFB

5.39e-043336238164795
Pubmed

DNA Damage Regulates Translation through β-TRCP Targeting of CReP.

HIVEP1 MED13

6.07e-043536226091241
Pubmed

Large-scale identification of mammalian proteins localized to nuclear sub-compartments.

ZRSR2P1 ZRSR2

7.15e-043836211555636
Pubmed

A genome-wide screen to identify transcription factors expressed in pelvic Ganglia of the lower urinary tract.

MYT1L BAZ1B OTX1 HIVEP1 UHRF2

7.75e-0470936522988430
GeneFamilyZinc fingers CCCH-type

ZRSR2P1 ZRSR2

1.43e-033529273
ToppCellAdult-Epithelial-basal_cell-D122|Adult / Lineage, Cell type, age group and donor

THOC3 HMCN1 DLL1 ASXL3

7.14e-0615436438d346402417960044ae999e61f0092b46f2b591
ToppCellAdult-Mesenchymal-matrix_fibroblast_1_cell-D175|Adult / Lineage, Cell type, age group and donor

ARHGAP20 HMCN1 ASXL3 SPON1

1.53e-05187364e15d2967aac248da3517bc2c7d1beaa1d5a0aa7f
ToppCellNS-critical-d_07-13-Epithelial-Secretory|d_07-13 / Location, Severity, dps_group, Lineage and Cell class of Upper airway (combined)

OTX1 PTPN13 ARHGAP20 CFB

1.77e-051943642172d951896265243d14996eacce5aab5e14e26e
ToppCellNS-moderate-d_07-13-Epithelial-Secretory|d_07-13 / Location, Severity, dps_group, Lineage and Cell class of Upper airway (combined)

OTX1 PTPN13 ARHGAP20 CFB

1.84e-0519636447930de6b47b7bf22d8dae8b7419a9cd1d22f0ea
ToppCellTracheal-NucSeq-Epithelial-Epi_airway_basal-Basal|NucSeq / Cell types per location group and 10X technology with lineage, and cell group designations

PTPN13 THOC3 DLL1 ASXL3

1.96e-0519936494a7867e800df352731796de8c24cba133c29622
ToppCell(13)_Th17|World / shred on Cell_type and subtype

PTPN13 CD6 IDS PGK1

2.12e-05203364e8d5db46093160d403ecd51142c3939d522bca8b
ToppCellStriatum-Macroglia-POLYDENDROCYTE-P5-P5_2-Sox4-POLYDENDROCYTE_(Rostral-�migratory_stream-�(RMS)_(Notum))|Striatum / BrainAtlas - Mouse McCarroll V32

TMIGD1 OTX1 TEX14

2.82e-057336350a8164d967f2706344adcdc1562dc08c9f16c8f
ToppCellTCGA-Bone_and_Soft_Tissue-Primary_Tumor-Sarcoma-Desmoid_Tumor|TCGA-Bone_and_Soft_Tissue / Sample_Type by Project: Shred V9

HTR1A HMCN1 SPON1

1.21e-04119363d8fbea9ded96fcc3ebdfb4d28873c563427ce811
ToppCellTCGA-Bone_and_Soft_Tissue-Primary_Tumor-Sarcoma-Desmoid_Tumor-7|TCGA-Bone_and_Soft_Tissue / Sample_Type by Project: Shred V9

HTR1A HMCN1 SPON1

1.21e-041193639e38f13bf98b9ee44b178300e6f80fd08a006296
ToppCellInt-URO-Other|Int-URO / Disease, Lineage and Cell Type

TEX14 SPIB CFB

2.44e-04151363ea5f25842e621be41a6491c9959d419d9cc7ebd6
ToppCellInt-URO-Other-RBC|Int-URO / Disease, Lineage and Cell Type

TEX14 SPIB CFB

2.44e-041513630344d482f1c55c9eaa15beb8d6bac1c6cdca21b3
ToppCellAdult-Epithelial-alveolar_epithelial_cell_type_1/2_(AT1/AT2-like)-D122|Adult / Lineage, Cell type, age group and donor

SECISBP2L PTPN13 CFB

2.73e-0415736331d1bd9138c60e8485664ec4144f987226e3eef9
ToppCellPBMC_fresh-frozen-Severe-critical_progression_d12-22_no-steroids-Lymphocytic-Lymphocytic_T-mature_alpha-beta_T_cell-T_CD4_c09-GZMK-FOS_l|Severe-critical_progression_d12-22_no-steroids / Compartment, severity and other cell annotations on 10x 3' data (130k)

ZNF142 CD6 ASXL3

2.79e-041583635775246e192629058ed89fb56031bdf4cbb9c15c
ToppCellBasal_cells-Donor_06|World / lung cells shred on cell class, cell subclass, sample id

DLL1 ASXL3 ZNF329

2.79e-04158363dd069a822e9698e6dddc155d9a5b52383f7879d5
ToppCellfacs-Heart-LA-24m|Heart / Tongue_Heart_Limb_Muscle_Aorta_Diaphragm - method, tissue, subtissue, age, lineage, cell ontology and free annotation

CPB1 SPIB CFB

2.94e-04161363248487415a0601d57ef2a6692e22a61368d0b9c8
ToppCellAdult-Epithelial-alveolar_epithelial_cell_type_1/2_(AT1/AT2-like)|Adult / Lineage, Cell type, age group and donor

SECISBP2L PTPN13 CFB

3.05e-04163363e819a1d6d28290854aa0672b3a18fa9e293d8f23
ToppCellPBMC_fresh-frozen-Severe-critical_progression_d12-22_no-steroids-Lymphocytic-Lymphocytic_T-mature_alpha-beta_T_cell-T_CD4_c02-AQP3|Severe-critical_progression_d12-22_no-steroids / Compartment, severity and other cell annotations on 10x 3' data (130k)

PTPN13 CD6 ASXL3

3.05e-041633639195051d6bcdd450ed745a099828a0d76d9d3f0b
ToppCellPBMC_fresh-frozen-Severe-critical_progression_d12-22_no-steroids-Lymphocytic-Lymphocytic_T-mature_alpha-beta_T_cell-T_CD4_c04-ANXA2|Severe-critical_progression_d12-22_no-steroids / Compartment, severity and other cell annotations on 10x 3' data (130k)

PTPN13 CD6 THOC3

3.11e-041643638f3255d7f67890389a768453492243ea982eb38a
ToppCell5'-Parenchyma_lung-Immune_Lymphocytic-Lymphocytic_T/NK-CD8-positive,_alpha-beta_T_cell-CD8_T_cells-CD8_T_cells_L.1.1.2.0|5' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5

CD6 UHRF2 ZRSR2

3.11e-0416436330c3c25b05a403a509b2e755c2f0878fecb10a02
ToppCellPBMC_fresh-frozen-Severe-critical_progression_d03-09-Lymphocytic-Lymphocytic_T-mature_alpha-beta_T_cell-T_CD4_c03-ITGA4|Severe-critical_progression_d03-09 / Compartment, severity and other cell annotations on 10x 3' data (130k)

PTPN13 CD6 THOC3

3.28e-0416736383969c36ac44b96afc9aa09400a99fa2b487f7ff
ToppCellTCGA-Thryoid-Primary_Tumor-Thyroid_Papillary_Carcinoma-Classical-8|TCGA-Thryoid / Sample_Type by Project: Shred V9

HIVEP1 DLL1 MED13

3.34e-0416836300646601548b0fee42ae16bfa5e93603bc7c5129
ToppCelldroplet-Kidney-KIDNEY-30m-Epithelial-brush_cell|Kidney / Skin_Bladder_Kidney_Mammary_Gland - method, tissue, subtissue, age, lineage, cell ontology and free annotation

TMIGD1 GPR179 CFB

3.34e-04168363b14fd50232887b6dca1f39014d43c6f66e5c3b5c
ToppCellTCGA-Colorectal-Solid_Tissue_Normal-Rectum_normal_tissue-Rectum_normal_tissue-6|TCGA-Colorectal / Sample_Type by Project: Shred V9

TMIGD1 CPB1 SPIB

3.34e-041683635ce3129a023a48a3d7e6b9306c1fc5addfef9675
ToppCellBALF-PFMC-Severe-critical_progression_d12-22_with-steroid-Lymphocytic-Lymphocytic_B-B_cell-B_c01-TCL1A|Severe-critical_progression_d12-22_with-steroid / Compartment, severity and other cell annotations on 10x 3' data (130k)

SPIB DLL1 IGHE

3.51e-04171363c3e3ea09c73050372314a89b282e36ba5f339d73
ToppCellfacs-Heart-LV-3m-Endothelial-endothelial_cell_of_endocardium|Heart / Tongue_Heart_Limb_Muscle_Aorta_Diaphragm - method, tissue, subtissue, age, lineage, cell ontology and free annotation

HMCN1 DLL1 SPON1

3.57e-04172363f2c17c49b375b28ad47dc6cabda62f1c238023dd
ToppCellfacs-Heart-LV-3m-Endothelial-endocardial_cell|Heart / Tongue_Heart_Limb_Muscle_Aorta_Diaphragm - method, tissue, subtissue, age, lineage, cell ontology and free annotation

HMCN1 DLL1 SPON1

3.57e-041723636ab4f01098dddb789df298ddf97b3c384405ee6c
ToppCellfacs-Marrow-B-cells-24m-Hematologic-hematopoietic_stem_cell|Marrow / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation

SPON1 TTLL5 CFB

3.57e-04172363a7fd4d61fb5017dce001d69d6b9a01e6cdf58828
ToppCell-IPF_02|World / lung cells shred on cell class, cell subclass, sample id

CD6 SPIB IGHE

3.70e-04174363ba50cc04fcdee1926d4af4787ac86555ae9632cc
ToppCellLPS-IL1RA+antiTNF|World / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2

PTPN13 ARHGAP20 SPON1

3.88e-04177363b7fee75de7e96924af488a5baa2334711889ae7c
ToppCell368C-Lymphocytic-NK_cells-NK_cell_E|Lymphocytic / Donor, Lineage, Cell class and subclass (all cells)

SECISBP2L PTPN13 DLL1

3.88e-04177363946803293a7955116c80f403e99e4093e798ca3f
ToppCell3'-Parenchyma_lung-Epithelial-Airway_epithelium-respiratory_basal_cell-Basal_resting-Basal_resting_L.0.0.0.0|3' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5

PTPN13 HMCN1 DLL1

3.88e-0417736375cb2067a3f2d1b5a964890b02b604d1e79bd163
ToppCellPBMC-Severe-Lymphocyte-B-B_cell-B_naive-B_naive-11|Severe / Location, Disease Group, Cell group, Cell class and sub_cluster (2021.03.01)

ARHGAP20 SPIB SPON1

3.95e-041783635d41fede13c8e64b6fdaf2155f1eb72bcfc32fdb
ToppCell10x5'-GI_large-bowel-Lymphocytic_T_CD4-Trm_Th1/Th17|GI_large-bowel / Manually curated celltypes from each tissue

PTPN13 CD6 IDS

4.01e-041793636359f30005b17dc5b5c4c8f3a6a38c87ccfe4ee9
ToppCellPBMC_fresh-frozen-Severe-critical_progression_d12-22_no-steroids-Lymphocytic-Lymphocytic_T-mature_alpha-beta_T_cell-T_CD4_c03-ITGA4|Severe-critical_progression_d12-22_no-steroids / Compartment, severity and other cell annotations on 10x 3' data (130k)

PTPN13 CD6 THOC3

4.08e-04180363d9dae9db8e17f6990032ee6cfa8393fae4768ca5
ToppCellBLOOD-unannotated|BLOOD / shred on tissue, inflammation_status, cell class(v3), cell subclass (v2)

PTPN13 CD6 THOC3

4.15e-041813633a5c0c701fc2c078e1504bbf88ae708546cc74a3
ToppCell3'-Parenchyma_lung-Immune_Lymphocytic-Lymphocytic_B-B_cell-B_cells-B_cells_L.1.5.0.1|3' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5

HIVEP1 SPIB IGHE

4.15e-04181363d66838fca0429cad2079cd8d92a5cd33eb0d3522
ToppCellfacs-Brain_Non-Myeloid-Cerebellum_-18m-Epithelial-neuroepithelial_cell|Brain_Non-Myeloid / Brain_Non-Myeloid_Brain_Myeloid - method, tissue, subtissue, age, lineage, cell ontology and free annotation

CPB1 SPON1 CFB

4.15e-04181363c26d3cbbc592299786d79d1b15fc6bead2aafb9a
ToppCellControl-Epithelial-Basal|Control / Disease state, Lineage and Cell class

PTPN13 DLL1 ASXL3

4.21e-04182363caddd0a52f0234ea6a916186ffaf2454cdcd80ee
ToppCellAdult-Epithelial-basal_cell|Adult / Lineage, Cell type, age group and donor

THOC3 HMCN1 ASXL3

4.28e-0418336300a6b19ca49e3b8e0d1cd387a3515b0ff4b81c81
ToppCellPND14-Endothelial-Endothelial_blood-vessel-Microvascular_EC-CAP2-CAP2_prolif|PND14 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif

TEX14 MED13 METTL14

4.28e-041833633ef9ac1ae13b6172f9121ab1c129ecaa0fef460f
ToppCellPND14|World / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif

TEX14 HMCN1 SPIB

4.35e-041843631bfee4eb121e76a79f48b06b45f05d124fbbedba
ToppCell3'-Broncho-tracheal-Immune_Lymphocytic-Lymphocytic_B-B_cell-B_cells-B_cells_L.1.5.0.1|3' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5

HIVEP1 IDS SPIB

4.42e-04185363e913c64f9b4873443d88dce270f0b7b6d1b4cbce
ToppCellMild-CD4+_T|Mild / Disease group and Cell class

PTPN13 CD6 SPON1

4.42e-04185363c28ecb63146de1b02418e5a4fad0ae7c2b66a41d
ToppCellP28-Endothelial-large_vessel_endothelial_cell-endothelial_cell_of_vein|P28 / developmental_time, Lineage, Cell group, Cell type, Cell type_cellcyc-phase

ARHGAP20 HMCN1 DLL1

4.49e-04186363153c8b2fd8a6e2141ca97c626f82e5f081f3180a
ToppCellPBMC_fresh-frozen-Mild-Moderate_progression_d12-25-Lymphocytic-Lymphocytic_B-B_cell-B_c03-CD27-AIM2|Mild-Moderate_progression_d12-25 / Compartment, severity and other cell annotations on 10x 3' data (130k)

SPIB DLL1 TTLL5

4.49e-0418636355b239834b96b1f7787ec77a7d19796d617bbbf0
ToppCelldroplet-Lung-LUNG-30m-Endothelial-Vein_endothelial_cell|Lung / Lung_Trachea - method, tissue, subtissue, age, lineage, cell ontology and free annotation

ARHGAP20 HMCN1 DLL1

4.49e-0418636341f1674afc17661eccaa779cdeb663db5e45685d
ToppCelldroplet-Lung-LUNG-30m-Endothelial-vein_endothelial_cell|Lung / Lung_Trachea - method, tissue, subtissue, age, lineage, cell ontology and free annotation

ARHGAP20 HMCN1 DLL1

4.49e-04186363aa006650cf21a2c51dfe1091681f67fdad939107
ToppCellPBMC_fresh-frozen-Severe-critical_progression_d12-22_no-steroids-Lymphocytic-Lymphocytic_T-mature_alpha-beta_T_cell-T_CD4_c07-AHNAK|Severe-critical_progression_d12-22_no-steroids / Compartment, severity and other cell annotations on 10x 3' data (130k)

PTPN13 CD6 IDS

4.56e-04187363e1d6c1194476cf26969e405b0951796fed519f44
ToppCellPBMC_fresh-frozen-Mild-Moderate_convalescent_d36-51-Lymphocytic-Lymphocytic_T-mature_alpha-beta_T_cell-T_CD4_c07-AHNAK|Mild-Moderate_convalescent_d36-51 / Compartment, severity and other cell annotations on 10x 3' data (130k)

PTPN13 CD6 THOC3

4.63e-041883633e3055dacc05a932f2beb114babf1dc76994e1af
ToppCellPBMC_fresh-frozen-Severe-critical_convalescent_d42-56-Lymphocytic-Lymphocytic_T-mature_alpha-beta_T_cell-T_CD4_c04-ANXA2|Severe-critical_convalescent_d42-56 / Compartment, severity and other cell annotations on 10x 3' data (130k)

PTPN13 CD6 THOC3

4.63e-04188363fe08277d5aa693a2e12786738d12ec6390e8d13d
ToppCellLPS_only-Stromal_mesenchymal-Matrix_Fibroblast-MatrixFB|LPS_only / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2

PTPN13 ARHGAP20 SPON1

4.70e-041893632a22b9fae70afb3dab8476f9c00e48a4df756410
ToppCellfacs-Pancreas|facs / Large_Intestine_Pancreas_Liver - method, tissue, subtissue, age, lineage, cell ontology and free annotation

MYT1L CPB1 IDS

4.85e-04191363d48e5f67d384226add7d7fb2a124954136e09a82
ToppCellPBMC_fresh-frozen-Severe-critical_convalescent_d42-56-Lymphocytic-Lymphocytic_T-mature_alpha-beta_T_cell-T_CD4_c07-AHNAK|Severe-critical_convalescent_d42-56 / Compartment, severity and other cell annotations on 10x 3' data (130k)

PTPN13 CD6 THOC3

4.85e-04191363b53b490a8796e819edd3eb4a5a42b4499077b2d3
ToppCellPBMC_fresh-frozen-Mild-Moderate_convalescent_d36-51-Lymphocytic-Lymphocytic_T-mature_alpha-beta_T_cell-T_CD4_c04-ANXA2|Mild-Moderate_convalescent_d36-51 / Compartment, severity and other cell annotations on 10x 3' data (130k)

PTPN13 CD6 THOC3

4.85e-041913639c747f8cc1cdce45e839b661d782e1e8cfb79578
ToppCellfacs-Marrow-T-cells-3m-Lymphocytic-immature_B_cell|Marrow / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation

HTR1A SPIB MED13

4.92e-041923632de242d81dc085ae734eb7d1f091af9a542e0866
ToppCell10x_3'_v3-thymus_(10x_3'_v3)-lymphocytic-T_lymphocytic-T_follicular_helper_cell|thymus_(10x_3'_v3) / Per Platform+tissue_group, by lineage_subgroup, cell_group, cell_type

CD6 IDS PGK1

4.92e-041923633e2a0f332e7f9833ba88f3c809cee78b65090401
ToppCellfacs-Marrow-T-cells-3m-Lymphocytic-immature_B_cell|Marrow / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation

HTR1A SPIB MED13

4.92e-04192363ba2a683472a8b785dbf666dc6e94356d879486c3
ToppCelldroplet-Lung-30m-Endothelial-venous_endothelial-vein_endothelial_cell-vein_endothelial_cell|30m / method, tissue, age, lineage, sublineage, cell ontologies, cell type and subtype

ARHGAP20 HMCN1 DLL1

4.92e-04192363452d54f0aca8657722d7ac61e8422921d08c06b3
ToppCelldroplet-Lung-30m-Endothelial-venous_endothelial-vein_endothelial_cell|30m / method, tissue, age, lineage, sublineage, cell ontologies, cell type and subtype

ARHGAP20 HMCN1 DLL1

4.92e-041923637ddaca206599603d4d0b2afb73ed2850225d277d
ToppCelldroplet-Lung-30m-Endothelial-venous_endothelial|30m / method, tissue, age, lineage, sublineage, cell ontologies, cell type and subtype

ARHGAP20 HMCN1 DLL1

4.92e-04192363bf0b996aeedc34a79c71df3379ec9c1aabe06a8c
ToppCellLPS-IL1RA+antiTNF-Stromal_mesenchymal-Matrix_Fibroblast-MatrixFB|LPS-IL1RA+antiTNF / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2

ARHGAP20 ASXL3 SPON1

5.00e-04193363fb28717fadd06c3840636d25409ce80c9254bd34
ToppCelldroplet-Pancreas-Endocrine-21m-Mesenchymal|Pancreas / Large_Intestine_Pancreas_Liver - method, tissue, subtissue, age, lineage, cell ontology and free annotation

HMCN1 ASXL3 SPON1

5.00e-0419336303678162648bd5b1d65a5450b60c8863edbf95c7
ToppCelldroplet-Pancreas-Endocrine-21m-Mesenchymal-pancreatic_stellate_cell|Pancreas / Large_Intestine_Pancreas_Liver - method, tissue, subtissue, age, lineage, cell ontology and free annotation

HMCN1 ASXL3 SPON1

5.00e-0419336359b8186d0221fba06a16157e9d148399ed801f38
ToppCellPBMC_fresh-frozen-Mild-Moderate_convalescent_d36-51-Lymphocytic-Lymphocytic_B-B_cell-B_c02-MS4A1-CD27|Mild-Moderate_convalescent_d36-51 / Compartment, severity and other cell annotations on 10x 3' data (130k)

ARHGAP20 SPIB IGHE

5.00e-04193363749faa5c592ee354733f5a7363a4277ef3462b93
ToppCellMesenchymal-matrix_fibroblast_1_cell|World / Lineage, Cell type, age group and donor

ARHGAP20 HMCN1 SPON1

5.00e-04193363acad568621ed677031797b8c2e34dafea798d681
ToppCellBALF-PFMC-Severe-critical_progression_d12-22_no-steroids-Lymphocytic-Lymphocytic_T-CD8-positive,_alpha-beta_T_cell|Severe-critical_progression_d12-22_no-steroids / Compartment, severity and other cell annotations on 10x 3' data (130k)

CPB1 CD6 UHRF2

5.00e-0419336300349d176fb6a46cbcc99c41d975651b6e9aaad4
ToppCellCF-Lymphoid|CF / Disease state, Lineage and Cell class

SPIB UHRF2 ZRSR2

5.00e-0419336311de07d13a7da223990b56fa89ba7fc1c3dd0122
ToppCelldroplet-Pancreas-Endocrine-21m-Mesenchymal-pancreatic_stellate_cell|Pancreas / Large_Intestine_Pancreas_Liver - method, tissue, subtissue, age, lineage, cell ontology and free annotation

HMCN1 ASXL3 SPON1

5.00e-04193363dc92680b4bb9fc26430c92e03adb839c8c3b3b98
ToppCellPBMC_fresh-frozen-Mild-Moderate_convalescent_d36-51-Lymphocytic-Lymphocytic_T-mature_alpha-beta_T_cell-T_CD4_c03-ITGA4|Mild-Moderate_convalescent_d36-51 / Compartment, severity and other cell annotations on 10x 3' data (130k)

PTPN13 CD6 THOC3

5.00e-04193363194b49c152e3e3f599068ec88a7f0af6427b743a
ToppCellFetal_29-31_weeks-Mesenchymal-matrix_fibroblast_1_cell-D062|Fetal_29-31_weeks / Lineage, Cell type, age group and donor

ARHGAP20 HMCN1 SPON1

5.08e-0419436335f132cc38ac133be01834ed0946188aa0757eb4
ToppCellFetal_29-31_weeks-Mesenchymal-matrix_fibroblast_1_cell|Fetal_29-31_weeks / Lineage, Cell type, age group and donor

ARHGAP20 HMCN1 SPON1

5.08e-04194363011e14d9ed1393275f892060e7708ffadcd0767f
ToppCellLPS-antiTNF-Stromal_mesenchymal-Matrix_Fibroblast-Activated_MatrixFB|LPS-antiTNF / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2

ARHGAP20 ASXL3 SPON1

5.08e-0419436389b706af2b25991fc2707eb24f49ba6ff3ae01f7
ToppCellBALF-PFMC-Severe-critical_progression_d12-22_no-steroids-Lymphocytic-Lymphocytic_T|Severe-critical_progression_d12-22_no-steroids / Compartment, severity and other cell annotations on 10x 3' data (130k)

CPB1 CD6 UHRF2

5.15e-0419536331b011f3d54e6729802aad1f771cef77744e3ff2
ToppCelldroplet-Lung-18m-Endothelial-venous_endothelial-vein_endothelial_cell-vein_endothelial_cell|18m / method, tissue, age, lineage, sublineage, cell ontologies, cell type and subtype

ARHGAP20 HMCN1 DLL1

5.15e-041953630c15be3e7c238e329505dcbbe197a977d1019d45
ToppCellBALF-PFMC-Severe-critical_progression_d12-22_no-steroids-Lymphocytic|Severe-critical_progression_d12-22_no-steroids / Compartment, severity and other cell annotations on 10x 3' data (130k)

CPB1 CD6 UHRF2

5.15e-0419536336c784709ee32174e05b457500339c3b8eee3244
ToppCellSmart-seq2-spleen_(Smart-seq2)-myeloid-myeloid_granulocytic-neutrophil|spleen_(Smart-seq2) / Per Platform+tissue_group, by lineage_subgroup, cell_group, cell_type

MYT1L HMCN1 ASXL3

5.15e-04195363d3755929ebbbf5e3afde44281e9056ddb614a291
ToppCelldroplet-Lung-18m-Endothelial-venous_endothelial|18m / method, tissue, age, lineage, sublineage, cell ontologies, cell type and subtype

ARHGAP20 HMCN1 DLL1

5.15e-0419536345ac0fdbeb0982d798c613a6d15715d725608aa9
ToppCelldroplet-Lung-18m-Endothelial-venous_endothelial-vein_endothelial_cell|18m / method, tissue, age, lineage, sublineage, cell ontologies, cell type and subtype

ARHGAP20 HMCN1 DLL1

5.15e-041953635b1f04a745467876b09113ee17ababd3fcf9fb01
ToppCellSmart-seq2-spleen_(Smart-seq2)-myeloid-myeloid_granulocytic|spleen_(Smart-seq2) / Per Platform+tissue_group, by lineage_subgroup, cell_group, cell_type

MYT1L HMCN1 ASXL3

5.15e-0419536319853c654ac64b3ae3bc99841c6cb29c8aaba85c
ToppCell10x5'-Liver-Lymphocytic_T_CD4-Trm_Th1/Th17|Liver / Manually curated celltypes from each tissue

PTPN13 CD6 IDS

5.15e-04195363480cc62ee1e5b1aaf6b62be6e5afd7a81236a1b0
ToppCellParenchymal-NucSeq-Epithelial-Epi_airway_basal-Basal|NucSeq / Cell types per location group and 10X technology with lineage, and cell group designations

THOC3 DLL1 ASXL3

5.15e-041953636c9c58322c1df891bb4bab56dacb542c8777bb7d
ToppCellmetastatic_Lymph_Node-T/NK_cells-CD4+_Th|T/NK_cells / Location, Cell class and cell subclass

CD6 IDS PGK1

5.15e-04195363944158240cfc3b2cf72a6601b4e02d8d31a903b9
ToppCell10x5'-lymph-node_spleen-Lymphocytic_T_CD4-Trm_Th1/Th17|lymph-node_spleen / Manually curated celltypes from each tissue

PTPN13 CD6 IDS

5.15e-04195363c60982804a74dbe6607c021799ca74af2204aba8
ToppCellNS-moderate-d_16-33-Epithelial-Secretory|d_16-33 / Location, Severity, dps_group, Lineage and Cell class of Upper airway (combined)

OTX1 PTPN13 CFB

5.23e-0419636370384c1da9baed843f414cfd1403ddd586a2db07
ToppCellcritical-Epithelial-Secretory|critical / Severity, Lineage and Cell class of Nasopharyngeal (NS) Samples from Patients and Controls

OTX1 PTPN13 CFB

5.23e-041963637da687eb983a54c28ee990424cc52e01caf5f4aa
ToppCellCOVID-19-Lymphoid-CD4_T_cells|Lymphoid / Condition, Lineage and Cell class

PTPN13 CD6 SPON1

5.23e-0419636328515d8e2f02366fa0ac1bea251a7a3f659c98c7
ToppCellBronchial-NucSeq-Epithelial-Epi_airway_basal-Basal|NucSeq / Cell types per location group and 10X technology with lineage, and cell group designations

THOC3 DLL1 ASXL3

5.31e-041973631e915957ea6a4550ecb9d6ee4b232aa5800faf20
ToppCellAT2_cells-IPF_04|World / lung cells shred on cell class, cell subclass, sample id

SECISBP2L BAZ1B PTPN13

5.31e-04197363fd7bdfa6bf5966ebc11fdd13915769429540ddbf
ToppCell10x5'-Liver-Lymphocytic_T_CD4|Liver / Manually curated celltypes from each tissue

PTPN13 CD6 IDS

5.31e-041973634891111894b741555f549deec6af8006376d9358
ToppCellParenchymal-10x3prime_v2-Stromal-Fibroblastic-Fibro_immune_recruiting|10x3prime_v2 / Cell types per location group and 10X technology with lineage, and cell group designations

MYT1L ASXL3 SPON1

5.31e-0419736331c8d6e565bbdc37843ce871fe91845b0cc18a9f
ToppCellParenchymal-NucSeq-Epithelial-Epi_airway_basal|NucSeq / Cell types per location group and 10X technology with lineage, and cell group designations

THOC3 DLL1 ASXL3

5.31e-04197363107cb153ea7fc74bbd244dbb9d0499c0a8506724
ToppCell(1)_T_cell-(13)_Th17|(1)_T_cell / shred on Cell_type and subtype

PTPN13 IDS PGK1

5.39e-04198363a3ac65295da7baed447786a302b01db1cc824db2
ToppCellCOVID-19-lung-Fibroblast|COVID-19 / Disease (COVID-19 only), tissue and cell type

ARHGAP20 HMCN1 SPON1

5.39e-041983633ec01a55ade5e1627258cc3cfebb2c3207a4cb43
ToppCell10x5'-lymph-node_spleen-Lymphocytic_T_CD4-Tfh|lymph-node_spleen / Manually curated celltypes from each tissue

PTPN13 CD6 IDS

5.39e-04198363fbdd37ca3d4b61f266bf6146662cb300ef67b850
ToppCellcellseq-Epithelial-Epithelial_Airway-Basal/Suprabasal-Basal|cellseq / Celltype signatures by Technology, Lineage, Lineage_subclass, Celltype_group, Cell_type2

OTX1 THOC3 DLL1

5.39e-041983637063d74d79f53d5c59c853a2575f9d3ef12f19ea
ToppCellproximal-mesenchymal-Alveolar_Fibroblast|proximal / Location, Lineage, Cell class (ontology) and Donor from 10X sequencing (macrophage renamed)

ARHGAP20 HMCN1 SPON1

5.46e-041993637f4840ae6a888380feca722543e5e52783f3e35d
ToppCelldistal-mesenchymal-Alveolar_Fibroblast-3|distal / Location, Lineage, Cell class (ontology) and Donor from 10X sequencing (macrophage renamed)

ARHGAP20 HMCN1 SPON1

5.46e-04199363fb23ecce41e31e2cc01814e3c0add756f489561f
ToppCellproximal-3-mesenchymal-Alveolar_Fibroblast|3 / Location, Lineage, Cell class (ontology) and Donor from 10X sequencing (macrophage renamed)

ARHGAP20 HMCN1 SPON1

5.46e-04199363301d02bbb37e6f1d24b6e865bc3fe3e91260eb30
ToppCellCaecum-(1)_T_cell-(13)_Th17|Caecum / shred on region, Cell_type, and subtype

PTPN13 CD6 PGK1

5.46e-04199363c67228b3e9e2afd8aa8b6c4358c3a27b0945eb29
ToppCellNeuron|World / Primary Cells by Cluster

MYT1L IDS ASXL3

5.46e-041993631f8104fd92f04690b41d9d07ac08dc59d76bb97d
DiseaseTremor

ZNF142 HTR1A

6.63e-0511332C0040822
Diseasealcohol and nicotine codependence

HTR1A HIVEP1

9.39e-0513332EFO_0004776
DiseaseIntellectual Disability

MYT1L ZNF142 DLL1 CDK10 MED13

1.30e-04447335C3714756
DiseaseAge-related macular degeneration

HMCN1 CFB

1.84e-0418332cv:C0242383
DiseaseAge related macular degeneration

HMCN1 CFB

5.17e-0430332C0242383
Diseaseejection fraction measurement

HTR1A HMCN1

1.06e-0343332EFO_0005527
Diseasetuberculosis

MYT1L HTR1A SPON1

1.79e-03216333MONDO_0018076
DiseaseSeizures

ZNF142 HTR1A DLL1

1.84e-03218333C0036572
Diseaseserum dimethylarginine measurement

MYT1L PTPN13

2.27e-0363332EFO_0005418
Diseasebody weight

MYT1L SECISBP2L HIVEP1 PGK1 CDK10 ASXL3

2.47e-031261336EFO_0004338

Protein segments in the cluster

PeptideGeneStartEntry
VSGDEDYCPRSKKAN

BAZ1B

946

Q9UIG0
SGLYALKKEESSCPA

ASXL3

76

Q9C0F0
DKKGSCERDAQYAPG

CFB

651

P00751
TSSGEDYCNSPKSKL

CD6

566

P30203
GVYKSDSSAKAETCP

GPR179

2006

Q6PRD1
CRASYDTSAPNAKRK

METTL14

51

Q9HCE5
CGPESSKKYAEAVTR

PGK1

316

P00558
CLDYKEPGAAAASSA

OTX1

316

P32242
RYTCLASSPAGDDDK

HMCN1

3596

Q96RW7
YDPKKRATAGDCLES

CDK10

306

Q15131
RPDSGCSTSKDTKYQ

DLL1

691

O00548
RSDPDACTISKDHGY

HTR1A

181

P08908
TKKCADSNPRGVSAY

IGHE

206

P01854
SYSERAPGKCSSFKE

KIAA1210

1276

Q9ULL0
SSEKYENTKTCRGPD

IDS

161

P22304
TYCGPAAESEKETKA

CPB1

271

P15086
KQCKSPSRRDSYSDS

PTPN13

1641

Q12923
SGQACSRPAYTKKDT

ARHGAP20

1006

Q9P2F6
DETLDKVPKSEGYCS

SPON1

31

Q9HCB6
SYEPDSSFKEASCKT

TEX14

1186

Q8IWB6
ADIDSDSGYCSPKHS

SECISBP2L

266

Q93073
KRKYSASSGGLCEEA

MED13

391

Q9UHV7
LDSCKHSSYPDSEGA

SPIB

26

Q01892
CPSASKVYKASDSAE

UHRF2

671

Q96PU4
EKPDNGTYSCIAKSS

TMIGD1

186

Q6UXZ0
ISSDGSYARTKPDEC

RBAK

151

Q9NYW8
CDDKDGKYDSSREAG

THOC3

326

Q96J01
EKDRANCPFYSKTGA

ZRSR2P1

171

Q15695
EGCSYAAPDRKAFIK

ZNF142

291

P52746
PKSYADKRTGDSDAC

ZNF329

111

Q86UD4
EKDRANCPFYSKTGA

ZRSR2

166

Q15696
LSGSSKSEDCFAPKY

HIVEP1

1546

P15822
SVNKKSGDYVSCDDP

TTLL5

271

Q6EMB2
NKSKSNSAADPDYCR

VAX1

61

Q5SQQ9
TKKGDLGYCSAPLSD

VN1R2

241

Q8NFZ6
DDAKRYCKDPSPSSS

MYT1L

676

Q9UL68