Cluster composition

Functions

CategoryNameIntersectionWithQueryPValueGenesInTermGenesInQueryGenesInTermInQueryID
GeneOntologyMolecularFunctioncatalytic activity, acting on a nucleic acid

BPTF CHD7 TUT4 CECR2 FAN1 ANGEL1

3.40e-04645306GO:0140640
GeneOntologyMolecularFunctionubiquitin-modified protein reader activity

SQSTM1 FAN1

4.08e-0420302GO:0140036
GeneOntologyMolecularFunctioncatalytic activity, acting on DNA

BPTF CHD7 CECR2 FAN1

6.07e-04262304GO:0140097
GeneOntologyMolecularFunctionubiquitin-like protein reader activity

SQSTM1 FAN1

6.41e-0425302GO:0140035
GeneOntologyMolecularFunctionATP-dependent activity, acting on DNA

BPTF CHD7 CECR2

9.00e-04127303GO:0008094
GeneOntologyMolecularFunctionATP-dependent chromatin remodeler activity

CHD7 CECR2

1.41e-0337302GO:0140658
GeneOntologyCellularComponentISWI-type complex

BPTF CECR2

1.79e-0414302GO:0031010
DomainBromodomain_CS

BPTF CECR2

8.45e-0426312IPR018359
DomainBROMODOMAIN_1

BPTF CECR2

1.71e-0337312PS00633
DomainBromodomain

BPTF CECR2

1.81e-0338312PF00439
DomainBROMODOMAIN_2

BPTF CECR2

2.10e-0341312PS50014
DomainBROMO

BPTF CECR2

2.20e-0342312SM00297
DomainBromodomain

BPTF CECR2

2.20e-0342312IPR001487
Domain-

BPTF CECR2

2.20e-03423121.20.920.10
DomainEGF

PCSK5 LAMA3 VWDE

6.82e-03235313SM00181
DomainEGF-like_dom

PCSK5 LAMA3 VWDE

7.99e-03249313IPR000742
Pubmed

CECR2, a protein involved in neurulation, forms a novel chromatin remodeling complex with SNF2L.

BPTF CECR2

2.31e-06331215640247
Pubmed

Systematic bromodomain protein screens identify homologous recombination and R-loop suppression pathways involved in genome integrity.

BPTF RNF213 TUT4 SQSTM1 CECR2 ARHGAP33 ANGEL1

4.60e-05111631731753913
Pubmed

Age of onset of amyotrophic lateral sclerosis is modulated by a locus on 1p34.1.

PCSK5 LAMA3

1.60e-042131222959728
Pubmed

Integrated genome-wide association, coexpression network, and expression single nucleotide polymorphism analysis identifies novel pathway in allergic rhinitis.

BSND LAMA3

2.28e-042531225085501
Pubmed

Canonical Wnt signaling regulates the proliferative expansion and differentiation of fibrocytes in the murine inner ear.

BSND FZD3

3.99e-043331224727668
InteractionZNF784 interactions

RFPL4B BPTF ZNF784

1.17e-0531293int:ZNF784
Cytoband5q35

SQSTM1 GRK6

1.11e-04233125q35
Cytoband8q24.3

VPS28 NAPRT

2.67e-031133128q24.3
CytobandEnsembl 112 genes in cytogenetic band chr2q11

GPAT2 DUSP2

4.82e-03153312chr2q11
CytobandEnsembl 112 genes in cytogenetic band chr1p32

BSND TUT4

4.94e-03155312chr1p32
ToppCell3'-GW_trimst-1.5-LargeIntestine-Neuronal-Glial_immature-ENCC/glia_Progenitor|GW_trimst-1.5 / Celltypes from developing, pediatric, Crohn's, & adult GI tract

CHD7 ZNF784 FAN1 ANGEL1

7.16e-06180314c72f15763ba707189e29c85db533557f01c7fdb1
ToppCellfacs-Marrow-T-cells-3m-Lymphocytic-immature_B_cell|Marrow / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation

TUT4 CECR2 DUSP2 GRK6

9.24e-061923142de242d81dc085ae734eb7d1f091af9a542e0866
ToppCellfacs-Marrow-T-cells-3m-Lymphocytic-immature_B_cell|Marrow / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation

TUT4 CECR2 DUSP2 GRK6

9.24e-06192314ba2a683472a8b785dbf666dc6e94356d879486c3
ToppCellCOVID-19_Mild|World / Disease group, lineage and cell class

RNF213 TUT4 SQSTM1 DUSP2

1.02e-051973145c33454b10023decd2f5ccda9229b6512659711e
ToppCellPBMC-Mild|PBMC / Location, Disease Group, Cell group, Cell class (2021.03.09)

RNF213 TUT4 SQSTM1 DUSP2

1.04e-0519831444417089b62056269cac38d3134ff209c05b7007
ToppCellPBMC-Mild|PBMC / Location, Disease Group, Cell group, Cell class and sub_cluster (2021.03.01)

RNF213 TUT4 SQSTM1 DUSP2

1.04e-0519831428ef3fc4c17dcb765537b75917f7db78baa522db
ToppCellLPS_IL1RA-Endothelial-Endothelial-Gen_Cap|LPS_IL1RA / Treatment groups by lineage, cell group, cell type

BPTF RNF213 CHD7 TUT4

1.09e-05200314dccec522ab0d7fff62ad6273b02aa9022dbbb8eb
Diseaseproprotein convertase subtilisin/kexin type 9 measurement

BSND TDRD15

1.84e-0422272EFO_0009312
Diseaseapolipoprotein B measurement

BSND PCSK5 TDRD15 BPTF GRK6

3.02e-04663275EFO_0004615
Diseasetotal lipids in lipoprotein particles measurement

BSND TDRD15

8.86e-0448272EFO_0022309
Diseasetriglycerides in LDL measurement

TDRD15 BPTF

1.20e-0356272EFO_0022320
Diseasetriglycerides in small VLDL measurement

TDRD15 BPTF

1.43e-0361272EFO_0022145
Diseasetriglycerides in medium LDL measurement

TDRD15 BPTF

1.47e-0362272EFO_0022322
Diseasephospholipids in large VLDL measurement

TDRD15 BPTF

1.47e-0362272EFO_0022169
Diseasetriglycerides in small LDL measurement

TDRD15 BPTF

1.62e-0365272EFO_0022323
Diseasevery low density lipoprotein cholesterol measurement

BSND TDRD15 BPTF

1.69e-03260273EFO_0008317
Diseasetriglycerides in very small VLDL measurement

TDRD15 BPTF

1.77e-0368272EFO_0022144
Diseasestem Cell Growth Factor beta measurement

PCSK5 GRK6

2.15e-0375272EFO_0008292
Diseasevery low density lipoprotein cholesterol measurement, phospholipids:total lipids ratio

BSND TDRD15 BPTF

2.33e-03291273EFO_0008317, EFO_0020946

Protein segments in the cluster

PeptideGeneStartEntry
RCRAAAFFLSLFLCL

FAM234A

46

Q9H0X4
FLARCLRPCFDQTVF

CALHM3

196

Q86XJ0
RRAFATCLRSPFCEE

CEP76

606

Q8TAP6
RLSPFRFEDFCAALV

BPTF

261

Q12830
RFSKPDSDRFVFLLC

CHD7

1351

Q9P2D1
FCSLFRTAFRLPDFE

CECR2

26

Q9BXF3
LPFCRSRLINHFFCE

OR2AK2

181

Q8NG84
RFPCTLACEARHFLL

LAMA3

901

Q16787
RFDTAFFLCCLREPP

NUDT19

211

A8MXV4
RTLLLDCRPFLAFCR

DUSP2

26

Q05923
PTDCLSCDRFFFLLR

PCSK5

1581

Q92824
FSLELLCPFFCLELL

RFPL4B

236

Q6ZWI9
HRCIFDRRFSCLPEL

ARHGAP33

111

O14559
CRCPLDRFQDFALID

BSND

231

Q8WZ55
SHCPDFFLFLCRLLS

GPAT2

681

Q6NUI2
LDCSRDFRPFLCALY

FZD3

71

Q9NPG1
PFVCIFSNRELRRCF

GPR85

336

P60893
LFREFCATRPELSRC

GRK6

66

P43250
SLRCHEDLPLFLRCF

FAN1

646

Q9Y2M0
FPLDLCTDSFFTSRR

FAN1

866

Q9Y2M0
PRFLLLESQAFRCCL

TDRD15

851

B5MCY1
FPRLFVEAFTSRCCE

PRAMEF19

36

Q5SWL8
AAREIRRFSFCCSPE

SQSTM1

16

Q13501
FLLRFRFCSIACQRP

ANGEL1

511

Q9UNK9
LRDCEASLFCNPSFI

RNF213

2226

Q63HN8
LIESRLFCRCSFDVP

VWDE

201

Q8N2E2
FLCRALCLFPRVFAA

TIMMDC1

11

Q9NPL8
SIDEFCRKFRLDCPL

VPS28

91

Q9UK41
RDAAEFELFFRRCPF

NAPRT

36

Q6XQN6
FCPHCSRIFTSDRLL

ZNF474

286

Q6S9Z5
FRDPRDLRCFICGDA

TUT4

1351

Q5TAX3
FACRFCAKPFRRSSD

ZNF784

196

Q8NCA9