Cluster composition

Functions

CategoryNameIntersectionWithQueryPValueGenesInTermGenesInQueryGenesInTermInQueryID
GeneOntologyBiologicalProcesssensory organ development

TBX3 FAT1 HLA-C ATP2B2 DICER1 MEIS3P1 MAP3K1 MYO3B

8.03e-05730418GO:0007423
GeneOntologyBiologicalProcessstem cell population maintenance

TBX3 BICRAL ZFP36L2 DICER1 PCM1

1.03e-04237415GO:0019827
GeneOntologyBiologicalProcessmaintenance of cell number

TBX3 BICRAL ZFP36L2 DICER1 PCM1

1.13e-04242415GO:0098727
GeneOntologyBiologicalProcessinner ear development

TBX3 HLA-C ATP2B2 DICER1 MYO3B

1.39e-04253415GO:0048839
DomainFF

ARHGAP5 PRPF40A

7.36e-056422PF01846
DomainFF

ARHGAP5 PRPF40A

7.36e-056422SM00441
DomainFF_domain

ARHGAP5 PRPF40A

7.36e-056422IPR002713
DomainFF

ARHGAP5 PRPF40A

7.36e-056422PS51676
DomainPAS_9

PASK KCNH3

2.20e-0410422PF13426
DomainFibrinogen_CS

FCN3 ANGPT4

8.24e-0419422IPR020837
DomainFibrinogen_a/b/g_C_2

FCN3 ANGPT4

1.32e-0324422IPR014715
Domain-

FCN3 ANGPT4

1.32e-03244224.10.530.10
DomainFibrinogen_C

FCN3 ANGPT4

1.67e-0327422PF00147
DomainFBG

FCN3 ANGPT4

1.93e-0329422SM00186
Domain-

FCN3 ANGPT4

2.06e-03304223.90.215.10
DomainFibrinogen_a/b/g_C_1

FCN3 ANGPT4

2.06e-0330422IPR014716
DomainFIBRINOGEN_C_1

FCN3 ANGPT4

2.35e-0332422PS00514
DomainFibrinogen_a/b/g_C_dom

FCN3 ANGPT4

2.35e-0332422IPR002181
DomainPAS

PASK KCNH3

2.35e-0332422SM00091
DomainFIBRINOGEN_C_2

FCN3 ANGPT4

2.35e-0332422PS51406
DomainPAS

PASK KCNH3

2.65e-0334422IPR000014
DomainPAS

PASK KCNH3

2.65e-0334422PS50112
DomainLAM_G_DOMAIN

FAT1 SLIT3

3.30e-0338422PS50025
DomainLaminin_G_2

FAT1 SLIT3

3.65e-0340422PF02210
DomainLamG

FAT1 SLIT3

4.40e-0344422SM00282
DomainQuinoprotein_ADH-like_supfam

FAM234A EML1

6.33e-0353422IPR011047
DomainLaminin_G

FAT1 SLIT3

7.54e-0358422IPR001791
DomainRhoGAP

ARHGAP5 ARHGAP20

8.57e-0362422SM00324
DomainRhoGAP

ARHGAP5 ARHGAP20

8.84e-0363422PF00620
DomainRHOGAP

ARHGAP5 ARHGAP20

9.11e-0364422PS50238
DomainRhoGAP_dom

ARHGAP5 ARHGAP20

9.11e-0364422IPR000198
Domain-

ARHGAP5 ARHGAP20

9.11e-03644221.10.555.10
Pubmed

Myotubularin-related proteins 3 and 4 interact with polo-like kinase 1 and centrosomal protein of 55 kDa to ensure proper abscission.

ARHGAP5 PASK MTMR4 HLA-C DICER1

2.24e-0616744525659891
Pubmed

Impact of polymorphisms in the HCP5 and HLA-C, and ZNRD1 genes on HIV viral load.

HLA-C POLR1H

4.69e-06344227083073
Pubmed

The HLA-B/-C haplotype block contains major determinants for host control of HIV.

HLA-C POLR1H

9.37e-06444219693088
Pubmed

Association of HLA-C and HCP5 gene regions with the clinical course of HIV-1 infection.

HLA-C POLR1H

1.56e-05544219050382
Pubmed

HIV-1 disease-influencing effects associated with ZNRD1, HCP5 and HLA-C alleles are attributable mainly to either HLA-A10 or HLA-B*57 alleles.

HLA-C POLR1H

1.56e-05544218982067
Pubmed

Quantitative interactome proteomics identifies a proteostasis network for GABAA receptors.

TRMT1L PRPF40A IMMT PCM1

1.93e-0512544436030824
Pubmed

Systematic bromodomain protein screens identify homologous recombination and R-loop suppression pathways involved in genome integrity.

PASK TBX3 BICRAL FAT1 SETD5 PRPF40A DICER1 PCM1

6.96e-05111644831753913
Pubmed

Identification of a novel human angiopoietin-like gene expressed mainly in heart.

FCN3 ANGPT4

6.99e-051044212624729
Pubmed

Eml1 loss impairs apical progenitor spindle length and soma shape in the developing cerebral cortex.

KIF18A EML1

8.54e-051144229229923
Pubmed

Proximity labeling reveals OTUD3 as a DNA-binding deubiquitinase of cGAS.

CDCA7 CRAT DICER1

8.94e-056844336966392
Pubmed

High-resolution mapping of mouse chromosome 8 identifies an evolutionary chromosomal breakpoint.

FAT1 PCM1

1.02e-04124429680377
Pubmed

Expression of Slit and Robo genes in the developing mouse heart.

TBX3 SLIT3

1.21e-041344220941780
Pubmed

Identification and developmental analysis of genes expressed by dopaminergic neurons of the substantia nigra pars compacta.

EML1 ATP2B2 DICER1

2.06e-049044315033168
Pubmed

An organelle-specific protein landscape identifies novel diseases and molecular mechanisms.

KIF18A NKTR ZFP36L2 SETD5 ATP2B2 DICER1 IMMT ARFGAP3

2.22e-04132144827173435
Pubmed

Wt1 and retinoic acid signaling in the subcoelomic mesenchyme control the development of the pleuropericardial membranes and the sinus horns.

TBX3 SULF1

2.64e-041944220185795
Pubmed

Genomewide association study of an AIDS-nonprogression cohort emphasizes the role played by HLA genes (ANRS Genomewide Association Study 02).

HLA-C POLR1H

2.64e-041944219115949
Pubmed

Matrix-screening reveals a vast potential for direct protein-protein interactions among RNA binding proteins.

KIF18A TRMT1L USP42 PRPF40A DICER1 PCM1

2.85e-0472344634133714
Pubmed

HDLBP Promotes Hepatocellular Carcinoma Proliferation and Sorafenib Resistance by Suppressing Trim71-dependent RAF1 Degradation.

ARHGAP5 C3P1 NKTR HLA-C PRPF40A DICER1 PCM1 MAP3K1

2.86e-04137144836244648
Pubmed

Hdac4 Interactions in Huntington's Disease Viewed Through the Prism of Multiomics.

ARHGAP5 TRMT1L IMMT PREX2 PCM1

3.26e-0447544531040226
Pubmed

Multilevel proteomics reveals host perturbations by SARS-CoV-2 and SARS-CoV.

PASK FAT1 FAM234A HLA-C PRPF40A DICER1 ANGPT4

3.45e-04106144733845483
Pubmed

Dysregulation of cardiogenesis, cardiac conduction, and cell cycle in mice lacking miRNA-1-2.

ARHGAP20 DICER1

4.61e-042544217397913
Pubmed

Prediction of the coding sequences of mouse homologues of KIAA gene: III. the complete nucleotide sequences of 500 mouse KIAA-homologous cDNAs identified by screening of terminal sequences of cDNA clones randomly sampled from size-fractionated libraries.

PASK ARHGAP20 DICER1 SULF1 SLIT3

5.32e-0452944514621295
Pubmed

Cytoplasmic aggregation of DDX1 in developing embryos: Early embryonic lethality associated with Ddx1 knockout.

ZFP36L2 DICER1

6.21e-042944231330130
Pubmed

Common genetic variation and the control of HIV-1 in humans.

HLA-C POLR1H

1.18e-034044220041166
Pubmed

The microRNA-processing enzyme Dicer is dispensable for somite segmentation but essential for limb bud positioning.

TBX3 DICER1

1.18e-034044221256124
Cytoband3p25.3

SETD5 ATP2B2

8.66e-04454423p25.3
CytobandEnsembl 112 genes in cytogenetic band chr8q13

SULF1 PREX2

2.45e-0376442chr8q13
GeneFamilyFibrinogen C domain containing

FCN3 ANGPT4

6.31e-0425272554
GeneFamilyRho GTPase activating proteins|BCH domain containing

ARHGAP5 ARHGAP20

2.52e-0350272721
ToppCellrenal_cortex_nuclei-Adult_normal_reference-Endothelial-blood_vessel_endothelial_cell_of_kidney-capillary-immature_endothelial_cell-Glomerular_Capillary_Endothelial_Cell_prolif|Adult_normal_reference / Celltypes from Cells and Nuclei per compartment and clinical group

TBX3 EML1 FCN3 CDCA7 PREX2

6.78e-07173435f193c63cc536d891c9d23043765e320252bb6e65
ToppCellRV-09._Endothelium_I|World / Chamber and Cluster_Paper

TBX3 EML1 FCN3 HLA-C PREX2

1.16e-06193435e3fa47e2c7cd8a5b69186711c57751f2296de8ae
ToppCellRV-09._Endothelium_I|RV / Chamber and Cluster_Paper

TBX3 EML1 FCN3 HLA-C PREX2

1.19e-061944357b408096e717f2327c12aea35a8d5fc4621d3b06
ToppCellLV-09._Endothelium_I|World / Chamber and Cluster_Paper

TBX3 EML1 FCN3 HLA-C PREX2

1.22e-0619543519e0a6c3eae1615aaa39767300acd937dfcb2a7f
ToppCellkidney_cells-Adult_normal_reference-Endothelial-blood_vessel_endothelial_cell_of_kidney-capillary-immature_endothelial_cell-Glomerular_Capillary_Endothelial_Cell|Adult_normal_reference / Celltypes from Cells and Nuclei per compartment and clinical group

TBX3 EML1 FCN3 HLA-C PREX2

1.35e-061994355d976d57872a8a25a11fe8cd53b01aa21a1a519a
ToppCellrenal_cortex_nuclei-Hypertensive_with+without-CKD-Mesenchymal-Fibroblast-Collagen-high_Fibroblast-|Hypertensive_with+without-CKD / Celltypes from Cells and Nuclei per compartment and clinical group

KLHL33 FCN3 ZFP36L2 SLIT3

1.66e-05159434cbb331eb689d8cea9e1146ba85e0a05d23301c47
ToppCellrenal_cortex_nuclei-Hypertensive_with+without-CKD-Mesenchymal-Fibroblast-Collagen-high_Fibroblast|Hypertensive_with+without-CKD / Celltypes from Cells and Nuclei per compartment and clinical group

KLHL33 FCN3 ZFP36L2 SLIT3

1.66e-05159434330ecbba97d47bc818a5e8d1d84b05d056bd831e
ToppCellPBMC_fresh-frozen-Severe-critical_progression_d12-22_with-steroid-Lymphocytic-Lymphocytic_T-mature_alpha-beta_T_cell-T_CD4_c03-ITGA4|Severe-critical_progression_d12-22_with-steroid / Compartment, severity and other cell annotations on 10x 3' data (130k)

ARHGAP5 PASK USP42 MAP3K1

2.02e-05167434ced6ed9b412739c6ced622523347c10295edbf53
ToppCellrenal_medulla_nuclei-Hypertensive_with+without-CKD-Endothelial-blood_vessel_endothelial_cell_of_kidney-capillary-immature_endothelial_cell-Glomerular_Capillary_Endothelial_Cell|Hypertensive_with+without-CKD / Celltypes from Cells and Nuclei per compartment and clinical group

TBX3 EML1 FCN3 PREX2

2.48e-05176434dc5a22f9d1347f157bdd93e6e5769b983deccf1a
ToppCellfacs-Large_Intestine-Proximal-3m-Epithelial-nan|Large_Intestine / Large_Intestine_Pancreas_Liver - method, tissue, subtissue, age, lineage, cell ontology and free annotation

ARHGAP5 TBX3 FAM234A ARHGAP20

2.48e-051764341dd54bfaa58541de51e5a8328651d390833bd480
ToppCelltumor_Lung-Endothelial_cells-EPCs|tumor_Lung / Location, Cell class and cell subclass

EML1 FCN3 PREX2 KCNH3

2.53e-05177434f8b152c09d56a97e8c0482fb1a3964c05f9dc8c5
ToppCellfacs-Liver-Non-hepatocytes-3m-Lymphocytic-T_cell|Liver / Large_Intestine_Pancreas_Liver - method, tissue, subtissue, age, lineage, cell ontology and free annotation

PASK BEND6 CDCA7 KCNH3

2.71e-0518043487347af8f28cf7c486c19f3f98c0afb022c323b5
ToppCellnormal-na-Lymphocytic_T-CytoT_GZMK+-male|normal / PBMC cell types (v2) per disease, treatment status, and sex

HLA-C CDCA7 ZFP36L2 TM4SF20

2.89e-0518343479defd22b3194dad16db55b9bdd220c09c1e6b90
ToppCellPrimary_Visual_cortex_(V1C)-Neuronal-Inh_GABAergic-i_Gaba_1-GABA_L1_LAMP5-Inh_L5-6_LAMP5_SFTA3_(Lamp5_Lhx6_2)|Primary_Visual_cortex_(V1C) / Sample groups (6 Anatomical region groups), with 5 level hierarchy of cell types

FAT1 CDCA7 SULF1 PREX2

2.95e-05184434e2de27cee3ea80f9b7a9a7884ceceeaa67b3214a
ToppCellControl-Endothelial-VE_Capillary_A|World / Disease state, Lineage and Cell class

TBX3 EML1 FCN3 PREX2

3.01e-05185434a28187c2fd23564314b35759479ff2ca21f61485
ToppCellControl-Endothelial_cells-Endothelial_cells_(other)|Control / group, cell type (main and fine annotations)

TBX3 EML1 FCN3 PREX2

3.08e-05186434c6075fe84226b370c5139066793844ad33ae2db1
ToppCellMid-temporal_gyrus_(MTG)-Neuronal-Inh_GABAergic-i_Gaba_1-GABA_L1_LAMP5-Inh_L1-6_LAMP5_CA13_(Lamp5_Lhx6_1)|Mid-temporal_gyrus_(MTG) / Sample groups (6 Anatomical region groups), with 5 level hierarchy of cell types

FAT1 CDCA7 SULF1 PREX2

3.08e-0518643477592a6397b44b2b59a4fc39d7224dd95343efe6
ToppCellAdult-Endothelial-capillary_endothelial_cell_(Cap1)-D175|Adult / Lineage, Cell type, age group and donor

TBX3 FAT1 EML1 FCN3

3.14e-05187434f3548817f2fded5978137bb252cb628ac199e4f6
ToppCellControl-Endothelial-VE_Capillary_A|Control / Disease state, Lineage and Cell class

TBX3 EML1 FCN3 PREX2

3.14e-0518743454d7588172ac145ff5045ad9771636729ca3f0ca
ToppCellMid-temporal_gyrus_(MTG)-Neuronal-Inh_GABAergic-i_Gaba_1-GABA_L1_LAMP5-Inh_L5-6_LAMP5_SFTA3_(Lamp5_Lhx6_2)|Mid-temporal_gyrus_(MTG) / Sample groups (6 Anatomical region groups), with 5 level hierarchy of cell types

FAT1 CDCA7 SULF1 PREX2

3.21e-051884348268574584e5fb869a6cb8bbd7135cd7454a6a25
ToppCelldroplet-Kidney-nan-3m-Epithelial-Pecam____Kidney_cortex_artery_cell|Kidney / Skin_Bladder_Kidney_Mammary_Gland - method, tissue, subtissue, age, lineage, cell ontology and free annotation

TBX3 EML1 ATP2B2 PREX2

3.21e-05188434ec0e241de2c8310b4417b9d4e2420d7a1662f1c0
ToppCellControl-Endothelial-VE_Capillary_A|Endothelial / Disease state, Lineage and Cell class

TBX3 FAT1 EML1 HLA-C

3.21e-0518843488b3415e33db81726dd29c1f50c886e057af50a0
ToppCellControl-Endothelial_cells|Control / group, cell type (main and fine annotations)

TBX3 EML1 FCN3 PREX2

3.21e-051884343953b08abfea93468fc8d177bdb16ca7c6ffa1ab
ToppCellAnterior_Cingulate_gyrus_(CgG)-Neuronal-Inh_GABAergic-i_Gaba_1-GABA_L1_LAMP5-Inh_L1-6_LAMP5_CA13_(Lamp5_Lhx6_1)|Anterior_Cingulate_gyrus_(CgG) / Sample groups (6 Anatomical region groups), with 5 level hierarchy of cell types

FAT1 CDCA7 SULF1 PREX2

3.21e-051884343139540a656c0436b2123ea50741ff8d00112165
ToppCellCOVID-19-Endothelial_cells-Endothelial_cells_(general)|COVID-19 / group, cell type (main and fine annotations)

TBX3 EML1 FCN3 PREX2

3.34e-05190434812e11314c76c0179fbe5a9bea29b41ce5cbc93d
ToppCellControl-Endothelial-VE_Capillary_B|Endothelial / Disease state, Lineage and Cell class

TBX3 FAT1 EML1 FCN3

3.34e-051904347f3f419fffe02934b6f27b697f7a6401072491ed
ToppCellControl-Endothelial-VE_Capillary_B|Control / Disease state, Lineage and Cell class

TBX3 EML1 FCN3 PREX2

3.41e-05191434322237793a1278bafb14e63cab688b353e352dcc
ToppCellControl-Endothelial-VE_Capillary_B|World / Disease state, Lineage and Cell class

TBX3 EML1 FCN3 PREX2

3.41e-05191434c672c8e28d06d555335976b3f8bd2ea6d3b34aae
ToppCelldroplet-Kidney-KIDNEY-1m-Epithelial-Pecam____Kidney_cortex_artery_cell|Kidney / Skin_Bladder_Kidney_Mammary_Gland - method, tissue, subtissue, age, lineage, cell ontology and free annotation

TBX3 EML1 SULF1 PREX2

3.41e-05191434b9ae5af426e7a1f2652a47700bb168371bd2dec6
ToppCelldroplet-Limb_Muscle-MUSCLE-30m-Mesenchymal-nan|Limb_Muscle / Tongue_Heart_Limb_Muscle_Aorta_Diaphragm - method, tissue, subtissue, age, lineage, cell ontology and free annotation

NKTR ARHGAP20 SULF1 PCM1

3.41e-051914347d1595e616f6f111fc2f5bc1b179c5d67d624cc9
ToppCellRA-09._Endothelium_I|RA / Chamber and Cluster_Paper

EML1 FCN3 HLA-C PREX2

3.48e-051924348a1b1c3e83a68ad74f8f4eb00455c9e41aa57cfc
ToppCellnucseq-Endothelial-Endothelial_Vascular-Endothelial_capillary|nucseq / Celltype signatures by Technology, Lineage, Lineage_subclass, Celltype_group, Cell_type2

TBX3 EML1 FCN3 PREX2

3.55e-05193434f582e939e3e08a8a3f71deec78c33715be8faa51
ToppCellrenal_cortex_nuclei-Renal_AKI_(acute_kidney_injury)-Endothelial-blood_vessel_endothelial_cell_of_kidney-capillary-immature_endothelial_cell-Glomerular_Capillary_Endothelial_Cell|Renal_AKI_(acute_kidney_injury) / Celltypes from Cells and Nuclei per compartment and clinical group

TBX3 EML1 FCN3 PREX2

3.55e-05193434456aa8a8f1f9cbba0bd618a5f623909079c0f56b
ToppCellhuman_hepatoblastoma|World / Sample and Cell Type and Tumor Cluster (all cells)

TBX3 NKTR SETD5 PCM1

3.55e-05193434e6a688bc834f845ff64dae1be64f073eec5091a1
ToppCellControl-Fibroblasts-Vascular_smooth_muscle|Control / group, cell type (main and fine annotations)

TBX3 FCN3 PREX2 SLIT3

3.55e-0519343460e44aac8be0430ad35e20eb98b1b700d76a0427
ToppCellnucseq-Endothelial-Endothelial_Vascular-Endothelial_capillary-CAP1|nucseq / Celltype signatures by Technology, Lineage, Lineage_subclass, Celltype_group, Cell_type2

TBX3 EML1 FCN3 PREX2

3.55e-05193434ad3f4fcc8e2816d696cbcde744dc16500e51ccac
ToppCellCOVID-19-kidney-Glomerular_EC|COVID-19 / Disease (COVID-19 only), tissue and cell type

TBX3 EML1 FCN3 PREX2

3.63e-05194434660535b492445063d965095a50e1e299ce04c50a
ToppCellrenal_cortex_nuclei-Hypertensive_with+without-CKD-Mesenchymal-Fibroblast-kidney_interstitial_fibroblast-Adaptive_/_Maladaptive_/_Repairing_Fibroblast|Hypertensive_with+without-CKD / Celltypes from Cells and Nuclei per compartment and clinical group

ARHGAP20 SULF1 PREX2 SLIT3

3.63e-05194434c49f72441b3557e2c3a9c4239e68c0cf0652814b
ToppCellChildren_(3_yrs)-Endothelial-capillary_endothelial_cell_(Cap1)|Children_(3_yrs) / Lineage, Cell type, age group and donor

TBX3 EML1 FCN3 PREX2

3.63e-0519443471ac69cdf7a08ca3ddfb5b492b14ac56b6cd5e5d
ToppCellEndothelial-A-Cryobiopsy_01|World / lung cells shred on cell class, cell subclass, sample id

TBX3 FCN3 SULF1 PREX2

3.63e-05194434e656ac5539e59e321b46706cb8cc423b2c3358a0
ToppCellrenal_cortex_nuclei-Hypertensive_with+without-CKD-Endothelial-blood_vessel_endothelial_cell_of_kidney-capillary-immature_endothelial_cell-Glomerular_Capillary_Endothelial_Cell|Hypertensive_with+without-CKD / Celltypes from Cells and Nuclei per compartment and clinical group

TBX3 EML1 FCN3 PREX2

3.70e-0519543423ced69fd904f1d4114b1a7f99f4b5f65ea8824b
ToppCellCOVID-19-Heart-EC_1|Heart / Disease (COVID-19 only), tissue and cell type

EML1 FCN3 HLA-C PREX2

3.70e-0519543450a193475db1bb1e05b8590225a553688c372c14
ToppCelldroplet-Limb_Muscle-MUSCLE-30m-Mesenchymal|Limb_Muscle / Tongue_Heart_Limb_Muscle_Aorta_Diaphragm - method, tissue, subtissue, age, lineage, cell ontology and free annotation

ARHGAP5 NKTR ARHGAP20 PCM1

3.70e-051954345c86fddd6d0530beecf45ea5ba6b823123847696
ToppCellnucseq-Endothelial-Endothelial_Vascular|nucseq / Celltype signatures by Technology, Lineage, Lineage_subclass, Celltype_group, Cell_type2

TBX3 EML1 FCN3 PREX2

3.77e-05196434686533fd3fba8e4df96b9dd1307e870e89db4332
ToppCellkidney_cells-Renal_AKI_(acute_kidney_injury)-Endothelial-blood_vessel_endothelial_cell_of_kidney-capillary-immature_endothelial_cell-Glomerular_Capillary_Endothelial_Cell|Renal_AKI_(acute_kidney_injury) / Celltypes from Cells and Nuclei per compartment and clinical group

TBX3 EML1 FCN3 PREX2

3.77e-05196434d323f7dc41380446e5967c69832bea88351a9331
ToppCellPCW_07-8.5-Mesenchymal|PCW_07-8.5 / Celltypes from embryonic and fetal-stage human lung

TBX3 ARHGAP20 SULF1 SLIT3

3.77e-051964348e10802f52e5e1853ea4ad34bf9a32a34e6112b5
ToppCellIPF-Endothelial-VE_Capillary_B|Endothelial / Disease state, Lineage and Cell class

TBX3 FAT1 FCN3 HLA-C

3.77e-051964348f0f72ead06abe02b575e443552eacc2151077ef
ToppCellLA-09._Endothelium_I|LA / Chamber and Cluster_Paper

EML1 FCN3 HLA-C PREX2

3.85e-05197434ab6d1ab586a188597a39854ef980b8955ebcc645
ToppCellnucseq-Endothelial|nucseq / Celltype signatures by Technology, Lineage, Lineage_subclass, Celltype_group, Cell_type2

TBX3 EML1 FCN3 PREX2

3.85e-05197434ebf9be068eaa658493fa7884fd19f34642922acb
ToppCellBronchial-NucSeq-Endothelial-Endothelia_vascular-VE_capillary|NucSeq / Cell types per location group and 10X technology with lineage, and cell group designations

TBX3 EML1 FCN3 PREX2

3.85e-0519743481718164c9802ee20c860ffbda7e62d5e9a76f16
ToppCellLV-09._Endothelium_I|LV / Chamber and Cluster_Paper

EML1 FCN3 HLA-C PREX2

3.85e-05197434f9731d4d636e51b94a96805eee6afe9aedc175e3
ToppCellFibroblasts-DKK3+_Fibroblasts|World / Immune cells in Rheumatoid Arthritis Joint Synovial Tissues

FAT1 EML1 SULF1 SLIT3

3.93e-051984344f4632f26a2043c5e4ab89031b4229b5dca1bd48
ToppCellrenal_cortex_nuclei-Adult_normal_reference-Endothelial-blood_vessel_endothelial_cell_of_kidney-capillary-immature_endothelial_cell-Glomerular_Capillary_Endothelial_Cell|Adult_normal_reference / Celltypes from Cells and Nuclei per compartment and clinical group

TBX3 EML1 FCN3 PREX2

3.93e-0519843492416e65a0dc1a4bf931833407620ea05d362f56
ToppCellBronchial-NucSeq-Endothelial-Endothelia_vascular|NucSeq / Cell types per location group and 10X technology with lineage, and cell group designations

TBX3 EML1 FCN3 PREX2

3.93e-05198434a1ccbf0e653b2dd665c2254920eb9b37243cc0bd
ToppCellCOVID-19-lung-Capillary_2|lung / Disease (COVID-19 only), tissue and cell type

TBX3 EML1 FCN3 PREX2

4.00e-05199434793ce71b78a68033ef4419ed571e1dd86b40124f
ToppCelltumor_Lung-Endothelial_cells-Tip-like_ECs|Endothelial_cells / Location, Cell class and cell subclass

PASK TBX3 FCN3 HLA-C

4.00e-0519943480c8641cfd84436eadf2234f1313749e2f73331f
ToppCellBrain_organoid-organoid_Paulsen_bioRxiv-1_mon-Proliferating-Cycling_Progenitors|1_mon / Sample Type, Dataset, Time_group, and Cell type.

FAT1 USP42 CDCA7 ZFP36L2

4.00e-05199434358c4b3037f59378db8916a2fbe9ed4830cf1449
ToppCellCOVID-19-kidney-Glomerular_EC|kidney / Disease (COVID-19 only), tissue and cell type

TBX3 EML1 FCN3 PREX2

4.00e-05199434fffd2f9042b55531dac4e5b463b5cee80402e7bb
ToppCellILEUM-inflamed-(8)_Fibroblast-(8)_Fibroblasts|(8)_Fibroblast / shred on tissue, inflammation_status, cell class(v3), cell subclass (v2)

NKTR ZFP36L2 PREX2 SLIT3

4.00e-05199434615f20bf136dfef53b072667cf0e4df6a1017e05
ToppCellNeuronal-Inhibitory-iA-iA_2(LAMP5)-CA1-|Neuronal / cells hierarchy compared to all cells using T-Statistic

FAT1 CDCA7 SULF1 PREX2

4.08e-05200434ca5401b76ab014080914bf78042d368cf318effa
ToppCellNeuronal-Inhibitory-iA-iA_2(LAMP5)-CA1|Neuronal / cells hierarchy compared to all cells using T-Statistic

FAT1 CDCA7 SULF1 PREX2

4.08e-0520043440286010bd17cf9e34ecd5440953b072ebfae208
ToppCellkidney_cells-Hypertensive_with+without-CKD-Endothelial-blood_vessel_endothelial_cell_of_kidney-capillary-immature_endothelial_cell|Hypertensive_with+without-CKD / Celltypes from Cells and Nuclei per compartment and clinical group

TBX3 EML1 FCN3 PREX2

4.08e-05200434ced14d83222dbebca85c40540e76824e683354f3
ToppCellNeuronal-Inhibitory-iA-iA_2(LAMP5)-CA1--L2-6|Neuronal / cells hierarchy compared to all cells using T-Statistic

FAT1 CDCA7 SULF1 PREX2

4.08e-0520043470c47d3bbe67d88c5b9dff99c33a603d25fa2ab0
ToppCellCOVID-19-Fibroblasts-Vascular_smooth_muscle|COVID-19 / group, cell type (main and fine annotations)

TBX3 FCN3 PREX2 SLIT3

4.08e-05200434c7f82196a0768ad96b1df8b8915bc541fb118a76
ToppCell356C-Fibroblasts-Fibroblast-E|Fibroblasts / Donor, Lineage, Cell class and subclass (all cells)

CCDC160 ARHGAP20 PREX2

3.05e-04136433edfd453c9a650d69d05a5a3ab15f7df56349fa86
ToppCell356C-Fibroblasts-Fibroblast-E-|Fibroblasts / Donor, Lineage, Cell class and subclass (all cells)

CCDC160 ARHGAP20 PREX2

3.05e-0413643303e4e2353c23ceffde35b2d0aadd15299e3db09f
ToppCellCOVID-19_Mild-Neu_0|World / 5 Neutrophil clusters in COVID-19 patients

FAT1 SULF1 MYO3B

3.32e-0414043393f024473b1bb3bf93ae776fd6a8fc5e93d013f0
ToppCell390C-Lymphocytic-CD8+_Cytotoxic_T-cell-CD8+_Cytotoxic_T_cell_0.5|390C / Donor, Lineage, Cell class and subclass (all cells)

HLA-C ZFP36L2 MYO3B

4.06e-04150433fdbfc8f743cf848978cf0488493f6df60be53982
ToppCellAdult-Epithelial-alveolar_epithelial_cell_type_2/Club-like_(AT2/Club-like)-D175|Adult / Lineage, Cell type, age group and donor

FAT1 ATP2B2 SULF1

4.06e-04150433b0b6ba3686d3eb8a9b249d30be14111de3b893be
ToppCellPND07-Immune-Immune_Lymphocytic_T/NK-Lymphocytic_T-CD4_T-CD4_T_prolif|PND07 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif

SYT16 CDCA7 KCNH3

4.31e-041534330ad401cb70b9edfc6ae6ccba6879c6c2b6c4d296
ToppCellfacs-Marrow-KLS-18m-Lymphocytic|Marrow / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation

TBX3 FAT1 ATP2B2

4.39e-0415443337765512dfae557b9f6eb30a29463b93682a4404
ToppCellrenal_medulla_nuclei-Hypertensive_with+without-CKD-Endothelial-blood_vessel_endothelial_cell_of_kidney-arteriolar_vasa-recta_endothelial-Ascending_Vasa_Recta_Endothelial_Cell_prolif|Hypertensive_with+without-CKD / Celltypes from Cells and Nuclei per compartment and clinical group

EML1 CDCA7 PREX2

4.47e-04155433babcb9e548f04ace8157d506d27c5941c692c491
ToppCellAT1-AT2_cells-Myositis-ILD_01|World / lung cells shred on cell class, cell subclass, sample id

SYT16 FAT1 MYO3B

4.73e-041584333bc51cfd37b289cc3e866b54ce55a298e5eff690
ToppCellrenal_medulla_nuclei-Renal_AKI_(acute_kidney_injury)-Endothelial-blood_vessel_endothelial_cell_of_kidney-capillary-immature_endothelial_cell-Glomerular_Capillary_Endothelial_Cell|Renal_AKI_(acute_kidney_injury) / Celltypes from Cells and Nuclei per compartment and clinical group

EML1 FCN3 PREX2

4.82e-04159433d3f81ba22160568ccaa6d2b04ebfd30630f9a6db
ToppCellfacs-Brain_Non-Myeloid-Cortex_-18m-Neuronal-nan|Brain_Non-Myeloid / Brain_Non-Myeloid_Brain_Myeloid - method, tissue, subtissue, age, lineage, cell ontology and free annotation

BEND6 ATP2B2 KCNH3

5.00e-0416143369f5e759c0925daa37e0177a9cc3154842906bf6
ToppCell390C-Myeloid-Macrophage-SPP1+_Macrophage_2|Myeloid / Donor, Lineage, Cell class and subclass (all cells)

FAM234A BEND6 TM4SF20

5.00e-041614332fe77af3b41e6eacb707a64feea18f9991618173
ToppCellPrimary_Visual_cortex_(V1C)-Neuronal-Inh_GABAergic-i_Gaba_2-GABA_VIP_2-Inh_L2-5_VIP_TOX2|Primary_Visual_cortex_(V1C) / Sample groups (6 Anatomical region groups), with 5 level hierarchy of cell types

CCDC160 CDCA7 PREX2

5.18e-0416343339181c58387189a815e7b3eb29fbd1dd4ee24d0a
ToppCellTCGA-Head_and_Esophagus-Solid_Tissue_Normal-Head_and_Neck-Head_and_Neck_normal_tissue-2|TCGA-Head_and_Esophagus / Sample_Type by Project: Shred V9

CCDC160 KLHL33 ATP2B2

5.18e-041634332dfd11f5803822ba01b92adf4395a3b3adda68f5
ToppCellrenal_medulla_nuclei-CKD+DKD_normotensive-Mesenchymal-Myocytic_interstitial_cell-Vascular_Smooth_Muscle_Cell_/_Pericyte|CKD+DKD_normotensive / Celltypes from Cells and Nuclei per compartment and clinical group

CDCA7 ANGPT4 SLIT3

5.37e-04165433cd8de98af8a1a8a6c81d71fae807cc07f319f4c9
ToppCellE16.5-Mesenchymal-Mesenchymal_structural-Fibroblastic-AF2-AF2_mature|E16.5 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif

SULF1 ANGPT4 SLIT3

5.37e-041654334e13fccd32029e2879e85f8966e582a46c09e4aa
ToppCellrenal_medulla_nuclei-CKD+DKD_normotensive-Mesenchymal-Myocytic_interstitial_cell-Vascular_Smooth_Muscle_Cell_/_Pericyte-|CKD+DKD_normotensive / Celltypes from Cells and Nuclei per compartment and clinical group

CDCA7 ANGPT4 SLIT3

5.37e-041654334f83ac71efc57be3668d8db1e62bad05dc6a5e2b
ToppCellrenal_cortex_nuclei-CKD+DKD_normotensive-Endothelial-blood_vessel_endothelial_cell_of_kidney-arteriolar_vasa-recta_endothelial|CKD+DKD_normotensive / Celltypes from Cells and Nuclei per compartment and clinical group

ATP2B2 SULF1 PREX2

5.37e-04165433a74751e0ec857aa974bec04ccc747c004a8f6e01
ToppCellPND14-Endothelial-Endothelial_blood-vessel-Macrovascular_EC-AEC|PND14 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif

ATP2B2 SULF1 PREX2

5.46e-041664337a45785a40b7425f97be67bab1c5ceb69b2bd85a
ToppCellControl-Epithelial-Mesothelial|Control / Disease state, Lineage and Cell class

FAT1 SULF1 SLIT3

5.46e-041664331ed3788257e14f097862b999f020bfe2a57de52b
ToppCellPND14-Endothelial-Endothelial_blood-vessel-Macrovascular_EC-AEC-AEC_mature|PND14 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif

ATP2B2 SULF1 PREX2

5.46e-04166433bbd382812f8a84a5d99888de2d7cca3a8b5e4695
ToppCellE16.5-Mesenchymal-Mesenchymal_structural-Fibroblastic-AF2|E16.5 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif

SULF1 ANGPT4 SLIT3

5.56e-04167433fe3338f99f94c0dac37e3d649dfdce82e4a56022
ToppCellrenal_cortex_nuclei-CKD+DKD_normotensive-Endothelial-blood_vessel_endothelial_cell_of_kidney-capillary-immature_endothelial_cell-Glomerular_Capillary_Endothelial_Cell|CKD+DKD_normotensive / Celltypes from Cells and Nuclei per compartment and clinical group

TBX3 EML1 PREX2

5.75e-04169433987ff79ad563825dd9877ea8ccb536758f8c6700
ToppCell343B-Lymphocytic-NK_cells-Proliferating_NK_cell|343B / Donor, Lineage, Cell class and subclass (all cells)

PASK KIF18A CDCA7

5.75e-0416943302fa66a91b8bd2bf971aec4f5ec58318b5bfdf14
ToppCellrenal_cortex_nuclei-CKD+DKD_normotensive-Endothelial-blood_vessel_endothelial_cell_of_kidney-arteriolar_vasa-recta_endothelial-Afferent_/_Efferent_Arteriole_Endothelial_Cell|CKD+DKD_normotensive / Celltypes from Cells and Nuclei per compartment and clinical group

ATP2B2 SULF1 PREX2

5.75e-04169433c7fc3a8c44f07c557b60d469717b66e2f5863d38
ToppCelldroplet-Liver-LIVER_HEPATOCYTES-30m-Endothelial-endothelial_cell_of_hepatic_sinusoid|Liver / Large_Intestine_Pancreas_Liver - method, tissue, subtissue, age, lineage, cell ontology and free annotation

SULF1 PREX2 SLIT3

5.85e-0417043350c6c571591aa4b218caefe5778c570c809f567e
ToppCellsaliva-Severe-critical_progression_d12-22_with-steroid-Myeloid-Macrophage-macrophage,_alveolar-Macro_c6-VCAN|Severe-critical_progression_d12-22_with-steroid / Compartment, severity and other cell annotations on 10x 3' data (130k)

MTMR4 TRMT1L DICER1

5.85e-041704330f215911b5880eeffeb43230f7eeaf55b612eaf2
ToppCelldroplet-Liver-LIVER_HEPATOCYTES-30m-Endothelial-endothelial_cell_of_hepatic_sinusoid|Liver / Large_Intestine_Pancreas_Liver - method, tissue, subtissue, age, lineage, cell ontology and free annotation

SULF1 PREX2 SLIT3

5.85e-041704338fe32dcf924d5f6665f7febbc9647d96b1e96f06
ToppCelldroplet-Liver-LIVER_HEPATOCYTES-30m-Endothelial|Liver / Large_Intestine_Pancreas_Liver - method, tissue, subtissue, age, lineage, cell ontology and free annotation

SULF1 PREX2 SLIT3

5.85e-041704333232db50b1a40f861e981a1b9c9073b81af9f832
ToppCellrenal_medulla_nuclei-Adult_normal_reference-Mesenchymal-Fibroblast-kidney_interstitial_fibroblast|Adult_normal_reference / Celltypes from Cells and Nuclei per compartment and clinical group

BEND6 ARHGAP20 SULF1

5.95e-041714335d31fc9b60329d4ae3c77e4ca679359d9314397d
ToppCellrenal_medulla_nuclei-Adult_normal_reference-Mesenchymal-Fibroblast-kidney_interstitial_fibroblast-kidney_interstitial_fibroblast_5|Adult_normal_reference / Celltypes from Cells and Nuclei per compartment and clinical group

KLHL33 ARHGAP20 SULF1

5.95e-041714332a34685f7d83d1cf9a88d304173cbca868c5f9fd
ToppCell3'_v3-lymph-node_spleen-Lymphocytic_T_CD4-T_CD4/CD8|lymph-node_spleen / Manually curated celltypes from each tissue

ZNF407 NKTR PCM1

5.95e-041714332e9a20f8980b78325c52065a9c14ab3656267c05
ToppCellrenal_medulla_nuclei-Adult_normal_reference-Endothelial-blood_vessel_endothelial_cell_of_kidney-capillary-immature_endothelial_cell-Glomerular_Capillary_Endothelial_Cell|Adult_normal_reference / Celltypes from Cells and Nuclei per compartment and clinical group

EML1 FCN3 PREX2

6.16e-04173433afa6bb19df52541d8d17cbfac9cbdd18a5f3632d
ToppCellnormal_Pleural_Fluid-T/NK_cells-Cytotoxic_CD8+_T|T/NK_cells / Location, Cell class and cell subclass

ARHGAP20 HLA-C MYO3B

6.16e-041734331e8a43ff32eab95857c794e0bf4f0b0dba155b4a
ToppCellfacs-Large_Intestine-Proximal-3m-Epithelial|Large_Intestine / Large_Intestine_Pancreas_Liver - method, tissue, subtissue, age, lineage, cell ontology and free annotation

ARHGAP5 TBX3 ARHGAP20

6.16e-04173433e1378201b15ffb98e196ac39fe3ee4b4078953bd
ToppCellfacs-Large_Intestine-Proximal-3m|Large_Intestine / Large_Intestine_Pancreas_Liver - method, tissue, subtissue, age, lineage, cell ontology and free annotation

ARHGAP5 TBX3 ARHGAP20

6.16e-0417343399532bb768ee35fed939a377acb5215d3f8904bd
ComputationalGenes upregulated in subsets of cells of a given type within various tumors

FAT1 NKTR SULF1

2.03e-0450253GAVISH_3CA_METAPROGRAM_FIBROBLASTS_CAF_4
Diseaseneutrophil count, mean platelet volume, leukocyte count, erythrocyte count, mean corpuscular hemoglobin concentration, mean corpuscular volume, monocyte count, obsolete_red blood cell distribution width, basophil count, platelet count, eosinophil count

FAM234A HLA-C

1.13e-0411432EFO_0004305, EFO_0004308, EFO_0004309, EFO_0004526, EFO_0004528, EFO_0004584, EFO_0004833, EFO_0004842, EFO_0005090, EFO_0005091, EFO_0005192
Diseasebreast cancer, lung cancer

CDCA7 MAP3K1

6.09e-0425432MONDO_0007254, MONDO_0008903
Diseasecysteine-rich with EGF-like domain protein 1 measurement

SETD5 ATP2B2

1.00e-0332432EFO_0021870
Diseasestomach cancer (is_marker_for)

KIF18A TBX3 DICER1

1.17e-03142433DOID:10534 (is_marker_for)
Diseasecolorectal cancer (is_marker_for)

KIF18A TBX3 DICER1

1.56e-03157433DOID:9256 (is_marker_for)
Diseaseesophagus squamous cell carcinoma (is_implicated_in)

FAT1 MAP3K1

1.97e-0345432DOID:3748 (is_implicated_in)
Diseasecutaneous melanoma, hair color

ARHGAP20 MAP3K1

3.71e-0362432EFO_0000389, EFO_0003924
Diseasesarcoidosis

HLA-C POLR1H

3.95e-0364432MONDO_0019338
Diseasediabetes mellitus

HLA-C ZFP36L2

4.45e-0368432EFO_0000400
Diseasevisceral adipose tissue measurement

SYT16 KIF18A EML1 MYO3B

5.21e-03481434EFO_0004765
Diseaseesophagus squamous cell carcinoma (is_marker_for)

FAT1 SETD5

5.24e-0374432DOID:3748 (is_marker_for)

Protein segments in the cluster

PeptideGeneStartEntry
NSSNNFSRSCVDEGF

FAM234A

116

Q9H0X4
CSTNDTNAKYNSRAA

ARFGAP3

96

Q9NP61
NFSLSAYNSCAETNA

CRAT

586

P43155
SNSSSAENDNYCKHS

DICER1

1111

Q9UPY3
DGAAASNAADSANAS

ATP2B2

316

Q01814
PDSFASTCSNSNSNS

BEND6

141

Q5SZJ8
NSSGQSDNCSSSSEA

KCNH3

421

Q9ULD8
QSLSSFQSESCDDNG

FAT1

4366

Q14517
FTTYDADHDSSNSNC

FCN3

231

O75636
LFFSDQTDQTSSNCS

PASK

746

Q96RG2
AAQAALQYQSSSCLD

KLHL33

46

A6NCF5
SFQAISSNINSDNCL

KIF18A

731

Q8NI77
SFNCFAQQTADSSEA

KIAA2026

1251

Q5HYC2
SQAACSNSAQGSDES

HLA-C

346

P10321
SSNDNFSVCPSNSVN

PCM1

926

Q15154
ANCSDNEFTQALTAA

IMMT

601

Q16891
NNDTSEACDADFDSS

MTMR4

276

Q9NYA4
QNSDSSASAPNKCYA

PROSER1

506

Q86XN7
AAAANANASTSASNT

PRPF40A

291

O75400
SAANSNSIFANSSNA

BICRAL

41

Q6AI39
ANSSQANDCLDSFAS

C3P1

316

Q6ZMU1
FNSTEDNSTCSTDNL

CCDC160

111

A6NGH7
QNTSFSTLDSDNDHC

ANGPT4

426

Q9Y264
SLLQFCNDDSASAAS

EML1

16

O00423
CSSDSFNEDNTAFAK

MEIS3P1

16

A6NDR6
SQDANSCQDSQALCF

MUC3B

1031

Q9H195
NSSSKCDDSFGCSSN

MAP3K1

1086

Q13233
CDDSFGCSSNSSNAV

MAP3K1

1091

Q13233
NASDISCFQLNDSSY

ARHGAP20

571

Q9P2F6
SCFQLNDSSYDSLEN

ARHGAP20

576

Q9P2F6
HDNNLSQSGSDSSCS

PLEKHA8P1

166

O95397
NFDSASSLNSDNLDA

TRMT1L

101

Q7Z2T5
SDESSSEQAAFNCFA

TBX3

336

O15119
FSCCNSDLQDSAQNS

SYT16

91

Q17RD7
STSDSEGSCSNSENN

NKTR

956

P30414
LANTCSSFQSDLDFC

POLR1H

6

Q9P1U0
SNENSSSSSICKDNA

SETD5

811

Q9C0A6
DSHSCSAAQAGQNNS

ARHGAP5

801

Q13017
CNSPSNSNANCEFSL

TM4SF20

116

Q53R12
DSCDSFASDNFANTR

CDCA7

36

Q9BWT1
LCDNKNDSANACSAF

SLIT3

1401

O75094
QQDSDLSAACSDADL

USP42

1216

Q9H9J4
DSYSDCNSNRNSIAS

PREX2

1106

Q70Z35
SRFQNENSGSSALNC

ZNF407

1196

Q9C0G0
AACSSASCANNAFAF

ZFP36L2

351

P47974
NLGSFCACTSSNNNT

SULF1

761

Q8IWU6
EAFGNSCTAINDNSS

MYO3B

476

Q8WXR4