Cluster composition

Functions

CategoryNameIntersectionWithQueryPValueGenesInTermGenesInQueryGenesInTermInQueryID
GeneOntologyMolecularFunctionnuclear retinoic acid receptor binding

PRAMEF33 PRAMEF17 PRAMEF10 PRAMEF20

8.62e-0755274GO:0042974
GeneOntologyMolecularFunctionubiquitin-like ligase-substrate adaptor activity

PRAMEF33 PRAMEF17 PRAMEF10 PRAMEF20

4.31e-0682274GO:1990756
GeneOntologyMolecularFunctionenzyme-substrate adaptor activity

PRAMEF33 PRAMEF17 PRAMEF10 PRAMEF20

7.76e-0695274GO:0140767
GeneOntologyMolecularFunctionnuclear receptor binding

PRAMEF33 PRAMEF17 PRAMEF10 PRAMEF20

1.10e-04187274GO:0016922
GeneOntologyMolecularFunctionscavenger receptor activity

VTN SCARF2

6.05e-0427272GO:0005044
GeneOntologyMolecularFunctionRNA polymerase II-specific DNA-binding transcription factor binding

PRAMEF33 PRAMEF17 PRAMEF10 PRAMEF20

2.25e-03417274GO:0061629
GeneOntologyBiologicalProcesscellular process involved in reproduction in multicellular organism

HEXB CCR6 PRAMEF17 PRAMEF10 PRAMEF20 SPESP1

4.03e-05527266GO:0022412
GeneOntologyBiologicalProcessoogenesis

HEXB PRAMEF17 PRAMEF10 PRAMEF20

4.13e-05156264GO:0048477
GeneOntologyBiologicalProcessblastocyst development

PRAMEF17 PRAMEF10 PRAMEF20 INTS1

7.06e-05179264GO:0001824
GeneOntologyBiologicalProcessblastocyst formation

PRAMEF17 PRAMEF10 PRAMEF20

1.27e-0478263GO:0001825
GeneOntologyBiologicalProcessfemale gamete generation

HEXB PRAMEF17 PRAMEF10 PRAMEF20

1.65e-04223264GO:0007292
GeneOntologyBiologicalProcessoocyte development

PRAMEF17 PRAMEF10 PRAMEF20

2.57e-0499263GO:0048599
GeneOntologyBiologicalProcessoocyte differentiation

PRAMEF17 PRAMEF10 PRAMEF20

2.89e-04103263GO:0009994
GeneOntologyBiologicalProcessgerm cell development

HEXB CCR6 PRAMEF17 PRAMEF10 PRAMEF20

2.99e-04482265GO:0007281
GeneOntologyBiologicalProcesssomatic stem cell population maintenance

PRAMEF17 PRAMEF10 PRAMEF20

3.32e-04108263GO:0035019
GeneOntologyCellularComponentCul2-RING ubiquitin ligase complex

PRAMEF33 PRAMEF17 PRAMEF10 PRAMEF20

3.23e-0747264GO:0031462
GeneOntologyCellularComponentacrosomal vesicle

HEXB PRAMEF17 PRAMEF10 PRAMEF20 SPESP1

4.92e-06206265GO:0001669
GeneOntologyCellularComponentcullin-RING ubiquitin ligase complex

PRAMEF33 PRAMEF17 PRAMEF10 PRAMEF20 FBXL6

5.66e-06212265GO:0031461
GeneOntologyCellularComponentubiquitin ligase complex

PRAMEF33 PRAMEF17 PRAMEF10 PRAMEF20 FBXL6

6.47e-05352265GO:0000151
GeneOntologyCellularComponentmotile cilium

CCR6 PRAMEF17 PRAMEF10 DNAH12 PRAMEF20

6.73e-05355265GO:0031514
GeneOntologyCellularComponentsecretory granule

DOCK2 HEXB ANGPTL6 PRAMEF17 PRAMEF10 PRAMEF20 SPESP1

1.81e-041014267GO:0030141
GeneOntologyCellularComponentsecretory vesicle

DOCK2 HEXB ANGPTL6 PRAMEF17 PRAMEF10 PRAMEF20 SPESP1

6.34e-041246267GO:0099503
GeneOntologyCellularComponentcilium

CCR6 PRAMEF17 PRAMEF10 DNAH12 PRAMEF20 MXRA8

6.80e-04898266GO:0005929
GeneOntologyCellularComponentpresynaptic membrane

CHRNA6 HTR1B CNTN6

4.78e-03277263GO:0042734
GeneOntologyCellularComponenttransferase complex

PRAMEF33 PRAMEF17 PRAMEF10 PRAMEF20 FBXL6

6.02e-03963265GO:1990234
GeneOntologyCellularComponentintracellular protein-containing complex

PRAMEF33 PRAMEF17 PRAMEF10 PRAMEF20 FBXL6

6.26e-03972265GO:0140535
MousePhenoabnormal spermatogonia proliferation

PRAMEF33 PRAMEF17 PRAMEF10 PRAMEF20

7.85e-0747224MP:0002685
MousePhenoincreased circulating amylase level

PRAMEF33 PRAMEF17 PRAMEF10 PRAMEF20

3.24e-05119224MP:0008806
MousePhenoabnormal jejunum morphology

PRAMEF17 PRAMEF10 PRAMEF20

3.47e-0541223MP:0004002
MousePhenoincreased kidney weight

PRAMEF33 PRAMEF17 PRAMEF10 PRAMEF20

7.03e-05145224MP:0003917
MousePhenoabnormal circulating amylase level

PRAMEF33 PRAMEF17 PRAMEF10 PRAMEF20

9.33e-05156224MP:0008804
MousePhenoabnormal duodenum morphology

PRAMEF17 PRAMEF10 PRAMEF20

1.32e-0464223MP:0003271
MousePhenoincreased male germ cell apoptosis

PRAMEF33 PRAMEF17 PRAMEF10 PRAMEF20

1.96e-04189224MP:0014052
MousePhenoabnormal kidney weight

PRAMEF33 PRAMEF17 PRAMEF10 PRAMEF20

2.82e-04208224MP:0002707
MousePhenoabnormal vitreous body morphology

PRAMEF33 PRAMEF17 PRAMEF10 TMEFF2 PRAMEF20

4.55e-04429225MP:0002699
MousePhenoabnormal male germ cell apoptosis

PRAMEF33 PRAMEF17 PRAMEF10 PRAMEF20

4.56e-04236224MP:0008280
MousePhenoabnormal cecum morphology

PRAMEF17 PRAMEF10 PRAMEF20

4.81e-0499223MP:0000494
MousePhenoazoospermia

PRAMEF33 PRAMEF17 PRAMEF10 PRAMEF20

5.17e-04244224MP:0005159
MousePhenoabnormal male germ cell physiology

PRAMEF33 PRAMEF17 PRAMEF10 PRAMEF20

5.17e-04244224MP:0020362
MousePhenoabsent gametes

PRAMEF33 PRAMEF17 PRAMEF10 PRAMEF20

6.20e-04256224MP:0001117
MousePhenoabnormal germ cell physiology

PRAMEF33 PRAMEF17 PRAMEF10 PRAMEF20

7.26e-04267224MP:0020363
MousePhenoenlarged urinary bladder

PRAMEF17 PRAMEF10 PRAMEF20

7.64e-04116223MP:0011874
MousePhenodecreased exploration in new environment

HEXB RALGAPA1 PRAMEF17 PRAMEF10 PRAMEF20

9.97e-04510225MP:0001417
MousePhenoincreased circulating protein level

CCDC117 HEXB PRAMEF33 PRAMEF17 PRAMEF10 SIGLEC7 SLC12A1 PRAMEF20

1.02e-031433228MP:0014501
MousePhenoincreased circulating enzyme level

CCDC117 HEXB PRAMEF33 PRAMEF17 PRAMEF10 SLC12A1 PRAMEF20

1.35e-031140227MP:0014450
MousePhenoincreased enzyme/coenzyme level

CCDC117 HEXB PRAMEF33 PRAMEF17 PRAMEF10 SLC12A1 PRAMEF20

1.40e-031148227MP:0014448
MousePhenoabnormal auditory brainstem response

CCDC117 PRAMEF33 PRAMEF17 PRAMEF10 PRAMEF20

1.72e-03576225MP:0004738
DomainPRAME_family

PRAMEF17 PRAMEF10 PRAMEF20

2.29e-0619263IPR026271
Domain-

PIDD1 PRAMEF17 PRAMEF10 PRAMEF20 FBXL6

7.11e-053212653.80.10.10
DomainL_dom-like

PIDD1 PRAMEF17 PRAMEF10 PRAMEF20 FBXL6

7.87e-05328265IPR032675
DomainARM-type_fold

DOCK2 RALGAPA1 INTS1

1.13e-02339263IPR016024
DomainAAA+_ATPase

DNAH12 TAP2

1.70e-02144262IPR003593
DomainAAA

DNAH12 TAP2

1.70e-02144262SM00382
Pubmed

Preferentially Expressed Antigen in Melanoma (PRAME) and the PRAME Family of Leucine-Rich Repeat Proteins.

PRAMEF33 PRAMEF17 PRAMEF10 PRAMEF20

1.38e-092027426694250
Pubmed

Sertoli cell-only phenotype and scRNA-seq define PRAMEF12 as a factor essential for spermatogenesis in mice.

PRAMEF33 PRAMEF17 PRAMEF10 PRAMEF20

2.09e-092227431729367
Pubmed

MAGE-B4, a binding partner of PRAMEF12, is dispensable for spermatogenesis and male fertility in mice.

PRAMEF33 PRAMEF17 PRAMEF10 PRAMEF20

3.60e-092527437451217
Pubmed

Differences in gene expression between mouse and human for dynamically regulated genes in early embryo.

PRAMEF33 PRAMEF17 PRAMEF10 PRAMEF20

5.82e-092827425089626
Pubmed

Thirteen Ovary-Enriched Genes Are Individually Not Essential for Female Fertility in Mice.

PRAMEF33 PRAMEF17 PRAMEF10 PRAMEF20

7.78e-093027438786026
Pubmed

Retinoic acid receptors are required for skeletal growth, matrix homeostasis and growth plate function in postnatal mouse.

PRAMEF33 PRAMEF17 PRAMEF10 PRAMEF20

1.48e-083527419389355
Pubmed

DUX is a non-essential synchronizer of zygotic genome activation.

PRAMEF33 PRAMEF17 PRAMEF10 PRAMEF20

6.47e-085027431806660
Pubmed

Differential expression of PRAMEL1, a cancer/testis antigen, during spermatogenesis in the mouse.

PRAMEF17 PRAMEF10 PRAMEF20

2.82e-071727323565261
Pubmed

Mouse Pramel1 regulates spermatogonial development by inhibiting retinoic acid signaling during spermatogenesis.

PRAMEF17 PRAMEF10 PRAMEF20

2.82e-071727337781892
Pubmed

Oocyte-specific gene Oog1 suppresses the expression of spermatogenesis-specific genes in oocytes.

PRAMEF17 PRAMEF10 PRAMEF20

3.38e-071827329731491
Pubmed

The promoter of the oocyte-specific gene, Oog1, functions in both male and female meiotic germ cells in transgenic mice.

PRAMEF17 PRAMEF10 PRAMEF20

3.38e-071827323894331
Pubmed

Identification of a new expanding family of genes characterized by atypical LRR domains. Localization of a cluster preferentially expressed in oocyte.

PRAMEF17 PRAMEF10 PRAMEF20

3.38e-071827314675769
Pubmed

Oogenesin is a novel mouse protein expressed in oocytes and early cleavage-stage embryos.

PRAMEF17 PRAMEF10 PRAMEF20

3.38e-071827312890732
Pubmed

Pramel15 facilitates zygotic nuclear DNMT1 degradation and DNA demethylation.

PRAMEF17 PRAMEF10 PRAMEF20

3.38e-071827339181896
Pubmed

Pramel7 mediates ground-state pluripotency through proteasomal-epigenetic combined pathways.

PRAMEF17 PRAMEF10 PRAMEF20

4.01e-071927328604677
Pubmed

Oog1, an oocyte-specific protein, interacts with Ras and Ras-signaling proteins during early embryogenesis.

PRAMEF17 PRAMEF10 PRAMEF20

4.71e-072027316580637
Pubmed

Pramel7 mediates LIF/STAT3-dependent self-renewal in embryonic stem cells.

PRAMEF17 PRAMEF10 PRAMEF20

4.71e-072027321425410
Pubmed

Oogenesis specific genes (Nobox, Oct4, Bmp15, Gdf9, Oogenesin1 and Oogenesin2) are differentially expressed during natural and gonadotropin-induced mouse follicular development.

PRAMEF17 PRAMEF10 PRAMEF20

7.31e-072327319480014
Pubmed

Incomplete reactivation of Oct4-related genes in mouse embryos cloned from somatic nuclei.

PRAMEF17 PRAMEF10 PRAMEF20

9.49e-072527312620990
Pubmed

Expression profiling in transgenic FVB/N embryonic stem cells overexpressing STAT3.

PRAMEF17 PRAMEF10 PRAMEF20

1.07e-062627318500982
Pubmed

LSM14B is essential for oocyte meiotic maturation by regulating maternal mRNA storage and clearance.

PRAMEF17 PRAMEF10 PRAMEF20

2.04e-063227337889087
Pubmed

Mbd3, a component of the NuRD co-repressor complex, is required for development of pluripotent cells.

PRAMEF17 PRAMEF10 PRAMEF20

6.19e-064627317287250
Pubmed

ZAR1 and ZAR2 are required for oocyte meiotic maturation by regulating the maternal transcriptome and mRNA translational activation.

PRAMEF17 PRAMEF10 PRAMEF20

1.25e-055827331598710
Pubmed

An abundance of X-linked genes expressed in spermatogonia.

PRAMEF17 PRAMEF10 PRAMEF20

1.32e-055927311279525
Pubmed

Cracking the egg: molecular dynamics and evolutionary aspects of the transition from the fully grown oocyte to embryo.

PRAMEF33 PRAMEF17 PRAMEF10 PRAMEF20

1.12e-0432627417015433
Pubmed

A genome-wide search for loci interacting with known prostate cancer risk-associated genetic variants.

DNAH12 CNTN6

7.51e-045227222219177
InteractionPRAMEF10 interactions

PRAMEF17 PRAMEF10

8.85e-064252int:PRAMEF10
Cytoband1p36.21

PRAMEF33 PRAMEF17 PRAMEF10 PRAMEF20

5.52e-08632741p36.21
CytobandEnsembl 112 genes in cytogenetic band chr1p36

PRAMEF33 PRAMEF17 PRAMEF10 PRAMEF20 MXRA8

4.36e-05681275chr1p36
GeneFamilyPRAME family

PRAMEF17 PRAMEF10 PRAMEF20

1.38e-0624173686
GeneFamilyAdenosine receptors|V-set domain containing

SIGLEC7 MXRA8

1.01e-02163172590
CoexpressionKOHOUTEK_CCNT2_TARGETS

PRAMEF33 PRAMEF17 PRAMEF10 PRAMEF20

1.41e-0681274MM938
CoexpressionDESCARTES_ORGANOGENESIS_SCHWANN_CELL_PRECURSOR

PRAMEF33 PRAMEF17 PRAMEF10 PRAMEF20

3.02e-0698274MM3656
CoexpressionKINNEY_DNMT1_METHYLATION_TARGETS

PRAMEF17 PRAMEF10 PRAMEF20

5.71e-0634273MM955
CoexpressionYAUCH_HEDGEHOG_SIGNALING_PARACRINE_DN

CHRNA6 PRAMEF33 PRAMEF17 PRAMEF10 PRAMEF20

1.44e-05309275MM1244
CoexpressionINGRAM_SHH_TARGETS_UP

PRAMEF33 PRAMEF17 PRAMEF10 PRAMEF20

1.90e-05156274MM550
CoexpressionMEISSNER_BRAIN_HCP_WITH_H3_UNMETHYLATED

PRAMEF17 PRAMEF10 PRAMEF20

2.75e-0557273MM1262
CoexpressionBYSTRYKH_HEMATOPOIESIS_STEM_CELL_AND_BRAIN_QTL_TRANS

PRAMEF33 PRAMEF17 PRAMEF10 PRAMEF20

3.34e-05180274MM612
CoexpressionGSE17721_POLYIC_VS_CPG_24H_BMDC_DN

RALGAPA1 CHRNA6 SIGLEC7 INTS1

5.03e-05200274M3954
CoexpressionYAMAZAKI_TCEB3_TARGETS_DN

PRAMEF33 PRAMEF17 PRAMEF10 PRAMEF20

8.94e-05232274MM1019
CoexpressionSANSOM_APC_TARGETS

PRAMEF33 PRAMEF17 PRAMEF10 PRAMEF20

1.10e-04245274MM735
CoexpressionMORI_SMALL_PRE_BII_LYMPHOCYTE_UP

PRAMEF17 PRAMEF10 PRAMEF20

1.39e-0498273MM592
CoexpressionHUANG_GATA2_TARGETS_DN

PRAMEF17 PRAMEF10 PRAMEF20

1.39e-0498273MM942
CoexpressionMIKKELSEN_MEF_HCP_WITH_H3_UNMETHYLATED

PRAMEF17 PRAMEF10 PRAMEF20 SPESP1

1.41e-04261274MM1277
CoexpressionFULLER_PBMC_F_TULARENSIS_VACCINE_LVS_AGE_22_54YO_48HR_DN

CCR6 TAP2

1.55e-0418272M40948
CoexpressionFULLER_PBMC_F_TULARENSIS_VACCINE_LVS_AGE_22_54YO_18HR_DN

CCR6 TAP2

2.12e-0421272M40919
CoexpressionBYSTRYKH_HEMATOPOIESIS_STEM_CELL_QTL_TRANS

CHRNA6 HTR1B VTN PRAMEF17 PRAMEF10 PRAMEF20

2.15e-04871276MM1005
CoexpressionFULLER_PBMC_F_TULARENSIS_VACCINE_LVS_AGE_22_54YO_336HR_DN

CCR6 TAP2

4.97e-0432272M40918
CoexpressionAtlasfacebase_RNAseq_e14.5_palate_poster_distal_ERK2_WT_2500_K4

HTR1B SCARF2 TAP2 TMEFF2 MXRA8

2.95e-06215235facebase_RNAseq_e14.5_palate_poster_distal_ERK2_WT_2500_K4
CoexpressionAtlasfacebase_RNAseq_e14.5_palate_poster_oral_Tgfbr2_WT_2500_K1

HTR1B SCARF2 TMEFF2 MXRA8

3.57e-05176234facebase_RNAseq_e14.5_palate_poster_oral_Tgfbr2_WT_2500_K1
CoexpressionAtlasfacebase_RNAseq_e14.5_palate_poster_proximal_ERK2_WT_2500_K3

HTR1B SCARF2 TMEFF2 MXRA8

1.19e-04240234facebase_RNAseq_e14.5_palate_poster_proximal_ERK2_WT_2500_K3
ToppCelldroplet-Kidney-nan-21m-Mesenchymal-fibroblast|Kidney / Skin_Bladder_Kidney_Mammary_Gland - method, tissue, subtissue, age, lineage, cell ontology and free annotation

SCARF2 CNTN6 TMEFF2 MXRA8

4.41e-061842743bffadb0cb2e0d825bdb6cfc5d23f5436cbc3efd
ToppCelldroplet-Kidney-nan-21m-Mesenchymal-Stroma____fibroblast|Kidney / Skin_Bladder_Kidney_Mammary_Gland - method, tissue, subtissue, age, lineage, cell ontology and free annotation

SCARF2 CNTN6 TMEFF2 MXRA8

4.51e-061852749954fc85b183c1cc45c3c24e3dadc7984ee6f649
ToppCelldroplet-Kidney-nan-21m-Mesenchymal|Kidney / Skin_Bladder_Kidney_Mammary_Gland - method, tissue, subtissue, age, lineage, cell ontology and free annotation

SCARF2 CNTN6 TMEFF2 MXRA8

4.51e-0618527433cc0e9d8b54cb7408b51235f2a70e044ebae04d
ToppCelldroplet-Kidney-nan-18m-Mesenchymal-fibroblast|Kidney / Skin_Bladder_Kidney_Mammary_Gland - method, tissue, subtissue, age, lineage, cell ontology and free annotation

SCARF2 CNTN6 TMEFF2 MXRA8

5.22e-0619227484149a5c6c3b3c9b86aed77cf8e72d99ef099fab
ToppCellParenchymal-10x5prime-Immune_Myeloid-Dendritic_cell-DC_activated|10x5prime / Cell types per location group and 10X technology with lineage, and cell group designations

CHRNA6 CCR6 VTN SLC12A1

6.02e-06199274f4ab29f99ce45a3044d2e9f356dc24d3c5e7121f
ToppCell390C-Lymphocytic-CD8+_Cytotoxic_T-cell-CD8+_Cytotoxic_T_cell_4|CD8+_Cytotoxic_T-cell / Donor, Lineage, Cell class and subclass (all cells)

CCR6 SIGLEC7 MXRA8

2.57e-05952733d6b97576ce4e7a3e495cbc7246ea8c0b2a386f7
ToppCell356C-Epithelial_cells-Epithelial-E_(AT2)|Epithelial_cells / Donor, Lineage, Cell class and subclass (all cells)

TAP2 CNTN6 SPESP1

8.34e-0514127331e0984f09983e83a814424f74c871c1c5a3a789
ToppCell356C-Epithelial_cells-Epithelial-E_(AT2)-|Epithelial_cells / Donor, Lineage, Cell class and subclass (all cells)

TAP2 CNTN6 SPESP1

8.34e-05141273d7d3c3932651d90fa4f3c4e3df16f4b677faaf9f
ToppCellLPS-IL1RA-Hematopoietic_Mast-Mast_cells|LPS-IL1RA / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2

DOCK2 CCR6 TMEFF2

8.52e-051422732a9a070e7c53ac593d46c6c5f6983f07d4413501
ToppCellLPS-IL1RA-Hematopoietic_Mast|LPS-IL1RA / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2

DOCK2 CCR6 TMEFF2

8.52e-05142273f7d0d5ca9fc3dd929d4fdd59b71bfa623007e992
ToppCellLPS-IL1RA+antiTNF-Hematopoietic_Mast-Mast_cells|LPS-IL1RA+antiTNF / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2

DOCK2 CCR6 TMEFF2

9.25e-05146273a5c84ad44d6ffb25028a4fd5454fd5de81b16a5e
ToppCellLPS-IL1RA+antiTNF-Hematopoietic_Mast|LPS-IL1RA+antiTNF / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2

DOCK2 CCR6 TMEFF2

9.25e-051462738133037881c15e75637fc616091a7055488dd5fc
ToppCellLPS-antiTNF-Hematopoietic_Mast-Mast_cells-T-cells|LPS-antiTNF / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2

DOCK2 CCR6 TMEFF2

9.44e-051472731ecd7c084e73eb6fae1ab1f9aae17115d3d62cbd
ToppCellLPS-antiTNF-Hematopoietic_Mast-Mast_cells|LPS-antiTNF / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2

DOCK2 CCR6 TMEFF2

9.82e-0514927359aa1f2a5cbeba64c4529fb05f544db17fd8b188
ToppCellLPS-antiTNF-Hematopoietic_Mast|LPS-antiTNF / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2

DOCK2 CCR6 TMEFF2

9.82e-051492731527cdd98a2734cbf8ce4c6170557280b71c55cb
ToppCellLPS_only-Hematopoietic_Mast-Mast_cells-T-cells|LPS_only / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2

DOCK2 CCR6 TMEFF2

1.00e-04150273ccb782fbcb3122266354a112a9a850506664f44d
ToppCellLPS-IL1RA+antiTNF-Hematopoietic_Mast-Mast_cells-T-cells|LPS-IL1RA+antiTNF / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2

DOCK2 CCR6 TMEFF2

1.02e-04151273b85a763459a0f019d1f9975d09b9f2247d62c9d3
ToppCellfrontal_cortex-Non-neuronal-leptomeningeal_cell-VLMC-VLMC_Spp1_Col15a1|frontal_cortex / Per Region, Lineage, Cell class, Cell type, Cell subtype

VTN SCARF2 MXRA8

1.19e-0415927334c90711c5857cf6ada7b3acff99f1d48c7caf29
ToppCellrenal_papilla_nuclei-Adult_normal_reference-Immune-Myeloid-Granulocytic-Mast_Cell|Adult_normal_reference / Celltypes from Cells and Nuclei per compartment and clinical group

DOCK2 SIGLEC7 TMEFF2

1.21e-04160273fe9970c160159b35f6599ed13c89cfb49264d554
ToppCellControl-Treg|World / Disease group and Cell class

CHRNA6 CCR6 VTN

1.24e-04161273ead9f5a491321f9e307f7c97e47a4ca124f59bb6
ToppCell5'-Adult-LargeIntestine-Hematopoietic-T_cells-Th17|Adult / Celltypes from developing, pediatric, Crohn's, & adult GI tract

DOCK2 ANGPTL6 CCR6

1.40e-0416827397bf074b91c9ae0064edc31fa4a2658ffdcfefa3
ToppCellPCW_05-06-Immune_Lymphocytic-Immune_Lymphocytic_NK/ILC|PCW_05-06 / Celltypes from embryonic and fetal-stage human lung

DOCK2 CCR6 SIGLEC7

1.43e-0416927345ac692a0c9064ce6b6a31c2cd21c85ccf594670
ToppCellPCW_05-06-Immune_Lymphocytic-Immune_Lymphocytic_NK/ILC-im_natural_killer_[NK]_(1)|PCW_05-06 / Celltypes from embryonic and fetal-stage human lung

DOCK2 CCR6 SIGLEC7

1.43e-041692733514a74980c7bd4bb76dbd06693f492e8dce21e0
ToppCellPSB-critical-LOC-Lymphoid-B_cell|LOC / Location, Severity, dps_group, Lineage and Cell class of Upper airway (combined)

DOCK2 CCR6 SIGLEC7

1.50e-0417227357b91bcce3f122f3d3267cf4d3a3ef67842caa9a
ToppCellTCGA-Colorectal-Recurrent_Tumor|TCGA-Colorectal / Sample_Type by Project: Shred V9

PRAMEF33 VTN PRAMEF10

1.58e-041752737f74961436f88c0e380819095e6104489914d765
ToppCellTCGA-Colorectal-Recurrent_Tumor-Colorectal_Adenocarcinoma|TCGA-Colorectal / Sample_Type by Project: Shred V9

PRAMEF33 VTN PRAMEF10

1.58e-04175273bee8f31f036dfcf9fc6ed29156554771a9ee3c60
ToppCellDendritic_Cells-Cryobiopsy_01|World / lung cells shred on cell class, cell subclass, sample id

CHRNA6 CCR6 TAP2

1.63e-04177273d2cd081bdda0eba9f6f6473c4d3939e4bee3440e
ToppCell3'-GW_trimst-1-LargeIntestine-Hematopoietic-T_cells-ILCP|GW_trimst-1 / Celltypes from developing, pediatric, Crohn's, & adult GI tract

DOCK2 CCR6 SIGLEC7

1.69e-04179273dd3cf8fd10dc257d933a7f45860dc2e244c158b7
ToppCellcontrol-Lymphoid-B_cell|control / Severity, Lineage and Cell class of Nasopharyngeal (NS) Samples from Patients and Controls

DOCK2 ANGPTL6 CCR6

1.74e-04181273e414303bb90e5fe7b667c2acf9a50f8694b90e54
ToppCellPCW_05-06-Immune_Lymphocytic|PCW_05-06 / Celltypes from embryonic and fetal-stage human lung

DOCK2 CHRNA6 CCR6

1.74e-04181273bd99c5849bb4979c891898312cb9f602c6831b23
ToppCellNS-control-d_0-4-Lymphoid-B_cell|d_0-4 / Location, Severity, dps_group, Lineage and Cell class of Upper airway (combined)

DOCK2 ANGPTL6 CCR6

1.77e-041822734b9b55154a79992112c1c467e8752c3cdbb541d9
ToppCell5'-GW_trimst-1.5-SmallIntestine-Hematopoietic-T_cells-LTi-like_NCR+_ILC3|GW_trimst-1.5 / Celltypes from developing, pediatric, Crohn's, & adult GI tract

DOCK2 CCR6 SIGLEC7

1.80e-04183273c7fedb5b0c1f17b3391ce1c4a6bfca7615c359c5
ToppCellfacs-Mammary_Gland-Mammary_Gland-18m-Mesenchymal|Mammary_Gland / Skin_Bladder_Kidney_Mammary_Gland - method, tissue, subtissue, age, lineage, cell ontology and free annotation

VTN TMEFF2 MXRA8

1.80e-041832735cfcd589a480e67654d3d94e71916f122150db10
ToppCellfacs-Mammary_Gland-Mammary_Gland-18m-Mesenchymal-stromal_cell|Mammary_Gland / Skin_Bladder_Kidney_Mammary_Gland - method, tissue, subtissue, age, lineage, cell ontology and free annotation

VTN TMEFF2 MXRA8

1.80e-04183273c3ea8d3b916ffcaca3156e0d77a952724554c4ab
ToppCellfacs-Mammary_Gland-Mammary_Gland-18m-Mesenchymal-stromal_cell|Mammary_Gland / Skin_Bladder_Kidney_Mammary_Gland - method, tissue, subtissue, age, lineage, cell ontology and free annotation

VTN TMEFF2 MXRA8

1.80e-0418327381003ddc24164959dd41bb12fcac72638789b8f2
ToppCelldroplet-Lung-30m-Mesenchymal-myofibroblast-pericyte_cell-pericyte|30m / method, tissue, age, lineage, sublineage, cell ontologies, cell type and subtype

VTN SCARF2 MXRA8

1.83e-041842737128a2be291544d3df3ed6c80f21ddda8437dcba
ToppCelldroplet-Lung-30m-Mesenchymal-myofibroblast-pericyte_cell|30m / method, tissue, age, lineage, sublineage, cell ontologies, cell type and subtype

VTN SCARF2 MXRA8

1.83e-04184273d14238f7b0b55a4c8d7040bea854bd221a66ac30
ToppCelldroplet-Lung-30m-Mesenchymal-myofibroblast|30m / method, tissue, age, lineage, sublineage, cell ontologies, cell type and subtype

VTN SCARF2 MXRA8

1.83e-0418427355dde9c4eebac2a33788c1ff1d8fe312d150fad4
ToppCelldroplet-Mammary_Gland-nan-18m-Mesenchymal-nan|Mammary_Gland / Skin_Bladder_Kidney_Mammary_Gland - method, tissue, subtissue, age, lineage, cell ontology and free annotation

VTN TMEFF2 MXRA8

1.83e-04184273fe4d3def3da4ffdea5ae6bb059f5397efd58fef3
ToppCelldroplet-Lung-LUNG-30m-Mesenchymal|Lung / Lung_Trachea - method, tissue, subtissue, age, lineage, cell ontology and free annotation

VTN SCARF2 MXRA8

1.92e-04187273976b74d081b7fba8620768613cc26f9262cd7b16
ToppCellP28-Mesenchymal-developing_mesenchymal_cell|P28 / developmental_time, Lineage, Cell group, Cell type, Cell type_cellcyc-phase

VTN SCARF2 MXRA8

1.95e-04188273e7681efb4d2de7f1d8a89552fff76a829376bf1b
ToppCellSubstantia_nigra-Endothelial|Substantia_nigra / BrainAtlas - Mouse McCarroll V32

SCARF2 TAP2 MXRA8

1.98e-04189273bef8234bd9c4d6e3cdef0791d8066b39ba56ebba
ToppCelldroplet-Limb_Muscle-nan-24m-Mesenchymal-nan|Limb_Muscle / Tongue_Heart_Limb_Muscle_Aorta_Diaphragm - method, tissue, subtissue, age, lineage, cell ontology and free annotation

VTN TMEFF2 MXRA8

1.98e-041892736e52cac679e0541ca5f2be316bdabdbc34da6e18
ToppCelldroplet-Mammary_Gland-nan-18m-Mesenchymal|Mammary_Gland / Skin_Bladder_Kidney_Mammary_Gland - method, tissue, subtissue, age, lineage, cell ontology and free annotation

VTN TMEFF2 MXRA8

2.04e-0419127319c67a812b8ce97472d316acd15aeefe8736000d
ToppCellfacs-Aorta-Heart-18m|Aorta / Tongue_Heart_Limb_Muscle_Aorta_Diaphragm - method, tissue, subtissue, age, lineage, cell ontology and free annotation

VTN TMEFF2 MXRA8

2.04e-041912736242f83acaf1714e9c1771a832cb67674b19e96d
ToppCelldroplet-Mammary_Gland-nan-18m-Mesenchymal-stromal_cell|Mammary_Gland / Skin_Bladder_Kidney_Mammary_Gland - method, tissue, subtissue, age, lineage, cell ontology and free annotation

VTN TMEFF2 MXRA8

2.04e-04191273a57cf0519d749febc0b69fe0b098b7ba53d63258
ToppCelldroplet-Kidney-nan-18m-Mesenchymal|Kidney / Skin_Bladder_Kidney_Mammary_Gland - method, tissue, subtissue, age, lineage, cell ontology and free annotation

SCARF2 TMEFF2 MXRA8

2.08e-0419227338d7a24ae205ef91ed2e0f402d8022f2a9cdb243
ToppCellfacs-Aorta-Heart-18m-Mesenchymal|Aorta / Tongue_Heart_Limb_Muscle_Aorta_Diaphragm - method, tissue, subtissue, age, lineage, cell ontology and free annotation

VTN TMEFF2 MXRA8

2.08e-041922736d4fe7ea278efa4b9d43f8a3c282bc0e0e9abaea
ToppCellfacs-Aorta-Heart-18m-Mesenchymal-nan|Aorta / Tongue_Heart_Limb_Muscle_Aorta_Diaphragm - method, tissue, subtissue, age, lineage, cell ontology and free annotation

VTN TMEFF2 MXRA8

2.08e-0419227347aed7c8e6f5ce1084821212a04f568319e65fd6
ToppCelldroplet-Kidney-nan-18m-Mesenchymal-Stroma____fibroblast|Kidney / Skin_Bladder_Kidney_Mammary_Gland - method, tissue, subtissue, age, lineage, cell ontology and free annotation

SCARF2 TMEFF2 MXRA8

2.08e-0419227304d155897ed075c359933080e36a4ab2150b6e9f
ToppCellfacs-Aorta-Heart-18m-Mesenchymal-fibroblast_of_cardiac_tissue|Aorta / Tongue_Heart_Limb_Muscle_Aorta_Diaphragm - method, tissue, subtissue, age, lineage, cell ontology and free annotation

VTN TMEFF2 MXRA8

2.08e-041922732c6406bc97c3224099b94a43f2890f057b528fa6
ToppCellBAL-Severe-Myeloid-cDC-cDC-cDC_10|Severe / Location, Disease Group, Cell group, Cell class and sub_cluster (2021.03.09)

CHRNA6 CCR6 VTN

2.11e-04193273a2194012dfa0174c6160900625c44e0fd04c50e7
ToppCellBAL-Severe-Myeloid-cDC-cDC-cDC_10|Severe / Location, Disease Group, Cell group, Cell class and sub_cluster (2021.03.01)

CHRNA6 CCR6 VTN

2.11e-041932737426a30ed01e5c8376b3e0ebe0f1057cfee88340
ToppCell3'-GW_trimst-1.5-SmallIntestine-Hematopoietic-T_cells-LTi-like_NCR+_ILC3|GW_trimst-1.5 / Celltypes from developing, pediatric, Crohn's, & adult GI tract

DOCK2 CCR6 SIGLEC7

2.11e-04193273afdf92ecace145407d57192dde5d0dac0bc37ee9
ToppCelldroplet-Lung-21m-Mesenchymal-fibroblast-adventitial_fibroblast-adventitial_fibroblast_l49|21m / method, tissue, age, lineage, sublineage, cell ontologies, cell type and subtype

SCARF2 CNTN6 MXRA8

2.14e-041942737826fe5eb254ac032de0d978f39585a40e0b3ee4
ToppCellfacs-GAT-Fat-18m-Mesenchymal-mesenchymal_progenitor|GAT / Fat_BAT_GAT_MAT_SCAT - method, tissue, subtissue, age, lineage, cell ontology and free annotation

VTN TMEFF2 MXRA8

2.14e-041942739709dc95fb6982b6a0467b507845d5bc17252e3e
ToppCellfacs-GAT-Fat-18m-Mesenchymal-mesenchymal_stem_cell_of_adipose|GAT / Fat_BAT_GAT_MAT_SCAT - method, tissue, subtissue, age, lineage, cell ontology and free annotation

VTN TMEFF2 MXRA8

2.14e-0419427393b7a9065430740ec31fce4e8c14ffccb498591d
ToppCellfacs-GAT-Fat-18m-Mesenchymal|GAT / Fat_BAT_GAT_MAT_SCAT - method, tissue, subtissue, age, lineage, cell ontology and free annotation

VTN TMEFF2 MXRA8

2.14e-041942730d2e65b44e3f143971c2fd24c4552f042b049cfa
ToppCelldroplet-Limb_Muscle-nan-21m-Mesenchymal-chondrocyte-like|Limb_Muscle / Tongue_Heart_Limb_Muscle_Aorta_Diaphragm - method, tissue, subtissue, age, lineage, cell ontology and free annotation

HEXB SCARF2 MXRA8

2.17e-04195273d2c9c58b46bf96f9a536e177b995e340b55c6750
ToppCell3'-GW_trimst-1.5-SmallIntestine-Hematopoietic|GW_trimst-1.5 / Celltypes from developing, pediatric, Crohn's, & adult GI tract

DOCK2 CCR6 SIGLEC7

2.17e-04195273441345d33f839a9e9222e790752b5603ff572bf2
ToppCellSmart-start-Cell-Wel_seq-Non-neoplastic-Myeloid-Mono-Mono_hypoxia-D|Smart-start-Cell-Wel_seq / Platform, Oncotype, Lineage, Cell_class, celltype (level4), mutation group

HEXB CHRNA6 VTN

2.17e-0419527310f303cbe92777404e7cc93a4991250ce07e65e1
ToppCelldroplet-Limb_Muscle-nan-24m-Mesenchymal-chondrocyte-like|Limb_Muscle / Tongue_Heart_Limb_Muscle_Aorta_Diaphragm - method, tissue, subtissue, age, lineage, cell ontology and free annotation

HEXB SCARF2 MXRA8

2.20e-0419627361bee32ca299219f31a30b57124e44e85b798e9f
ToppCell(5)_Fibroblasts-(5)_Fibroblast-E|(5)_Fibroblasts / Lung cell shreds - cell class (v4) and cell subclass (v4)

HEXB VTN MXRA8

2.24e-041972739b1c1d72c5a8c90d71ae31e4c198d2276872eaa0
ToppCellSepsis-Bac-SEP-Lymphocyte-T/NK-CD8+_T_naive|Bac-SEP / Disease, condition lineage and cell class

RALGAPA1 DNAH12 MXRA8

2.27e-04198273a9a009e5eeb935232034635ad4a3c27d83c081ac
ToppCellTracheal-10x5prime-Stromal-Peri/Epineurial_-NAF_epineurial|10x5prime / Cell types per location group and 10X technology with lineage, and cell group designations

SCARF2 TMEFF2 MXRA8

2.31e-04199273fbec5c034576cb1adaf05f6f97cc5525d19e0c1b
ToppCellmedial-mesenchymal-Myofibroblast|medial / Location, Lineage, Cell class (ontology) and Donor from 10X sequencing (macrophage renamed)

ANGPTL6 SCARF2 MXRA8

2.31e-04199273e25acdb5809aaff631cb06dbe4c7e59549a0bdb9
ToppCellmedial-2-mesenchymal-Myofibroblast|2 / Location, Lineage, Cell class (ontology) and Donor from 10X sequencing (macrophage renamed)

ANGPTL6 SCARF2 MXRA8

2.31e-0419927395aae608fa35a9c82b12c6f18937ce636750ca44
ToppCellMacrophages-IPF_01|World / lung cells shred on cell class, cell subclass, sample id

HEXB VTN SIGLEC7

2.31e-04199273b51bcbe1675b9665e649a6aa96b1a00575a36093
ToppCell10x_3'_v2v3-Non-neoplastic-Myeloid-TAM-BDM-TAM-BDM_MHC-Z|10x_3'_v2v3 / Platform, Oncotype, Lineage, Cell_class, celltype (level4), mutation group

HEXB CHRNA6 SIGLEC7

2.31e-04199273639539d27e8ea1cc47630a69668e6cba02f8c9ca
ToppCellmedial-mesenchymal-Myofibroblast-2|medial / Location, Lineage, Cell class (ontology) and Donor from 10X sequencing (macrophage renamed)

ANGPTL6 SCARF2 MXRA8

2.31e-041992739ebf4822ff9fa08574edec5dbf4f2a1488f34b1d
DiseaseMuscle hypotonia

RALGAPA1 INTS1

8.56e-0517242C0026827

Protein segments in the cluster

PeptideGeneStartEntry
ALKLMVQAWPFLRLP

PRAMEF33

51

A0A0G2JMD5
LFLLLPLSMLKGEPW

ERV3-1

11

Q14264
LPWKVLLVMLLALIT

HTR1B

46

P28222
MELVLWKPLPELLSD

CCDC117

206

Q8IWD4
EPIRWKLLMLGLELL

CCR6

206

P51684
QVLRLLNLMWLPKPP

FBXL6

331

Q8N531
ALKLMVQAWPFLRLP

PRAMEF17

51

Q5VTA0
EALLLPDWLKLRMIR

INTS1

1211

Q8N201
KLLFDLMPIIWIKPT

DNAH12

3016

Q6ZR08
LKLLPQVLLMRWPLD

CHRNA6

346

Q15825
GLLGLLKWRMKPQLL

DOCK2

616

Q92608
MGKPWLRALQLLLLL

ANGPTL6

1

Q8NI99
MRLLWKLVILLPLIN

CNTN6

1

Q9UQ52
LWPLPLLVKMTPNLL

HEXB

56

P07686
DALWMATLPIKLPRL

PIDD1

746

Q9HB75
WLLLLPVMLLIVARP

TMEFF2

21

Q9UIK5
ALKLMVQAWPFLRLP

PRAMEF20

51

Q5VT98
MLLLLLLPLLWGRER

SIGLEC7

1

Q9Y286
MAWLEILTKNLPPVL

SLC12A1

1071

Q13621
VLMWRLLKLSRPDLP

TAP2

136

Q03519
MKPLVLLVALLLWPS

SPESP1

1

Q6UW49
MKPPLLVFIVCLLWL

CLUL1

1

Q15846
LDWIMALPLKTLLQP

RALGAPA1

1396

Q6GYQ0
PSLLLLLLLWMLPDT

SCARF2

26

Q96GP6
ALKLMVQAWPFLRLP

PRAMEF10

51

O60809
MAPLRPLLILALLAW

VTN

1

P04004
MALPSRILLWKLVLL

MXRA8

1

Q9BRK3