Cluster composition

Functions

CategoryNameIntersectionWithQueryPValueGenesInTermGenesInQueryGenesInTermInQueryID
GeneOntologyMolecularFunctiondynein heavy chain binding

NISCH DYNC2I1 DNAI4 DYNC1LI2

1.05e-0617944GO:0045504
GeneOntologyMolecularFunctiontelomeric repeat-containing RNA binding

HNRNPA1L2 HNRNPA1

6.56e-053942GO:0061752
GeneOntologyMolecularFunctionRNA strand annealing activity

HNRNPA1L2 HNRNPA1

2.17e-045942GO:0033592
GeneOntologyBiologicalProcessintracellular transport

NEFM VPS13D CCDC88A IGF2R VPS13C GCC2 SGSM2 DYNC2I1 CEP131 RBM8A ACTN2 DIAPH3 HERC2 SEC63 PHAX RIMS2 ARFIP1 DNAJC6 HNRNPA1 IWS1

1.08e-0514969420GO:0046907
GeneOntologyBiologicalProcessactin filament-based process

CCDC88A MYL9 ANK2 NCKAP1 CLASP1 BMP10 NISCH PPFIA1 ARHGAP26 AUTS2 CACNA1H ACTN1 ACTN2 DIAPH3 ARFIP1

1.52e-059129415GO:0030029
GeneOntologyBiologicalProcessbasal protein localization

NCKAP1 ERBIN

2.05e-052942GO:0045175
GeneOntologyBiologicalProcessactin cytoskeleton organization

CCDC88A MYL9 NCKAP1 CLASP1 BMP10 NISCH PPFIA1 ARHGAP26 AUTS2 ACTN1 ACTN2 DIAPH3 ARFIP1

7.02e-058039413GO:0030036
GeneOntologyBiologicalProcesscellular anatomical entity morphogenesis

MYL9 ANK2 CLASP1 BMP10 ACTN2 KNL1

8.00e-05156946GO:0032989
GeneOntologyBiologicalProcesscellular component assembly involved in morphogenesis

MYL9 ANK2 CLASP1 BMP10 ACTN2 KNL1

8.00e-05156946GO:0010927
GeneOntologyBiologicalProcessregulation of actin filament-based process

CCDC88A ANK2 NCKAP1 CLASP1 BMP10 PPFIA1 CACNA1H ACTN2 ARFIP1

1.75e-04438949GO:0032970
GeneOntologyBiologicalProcessregulation of supramolecular fiber organization

CCDC88A NCKAP1 CLASP1 BMP10 PPFIA1 PDE4DIP ACTN2 DIAPH3 ARFIP1

1.75e-04438949GO:1902903
GeneOntologyBiologicalProcessprotein retention in Golgi apparatus

VPS13D VPS13C

2.04e-045942GO:0045053
GeneOntologyCellularComponentcortical microtubule cytoskeleton

CLASP1 PDE4DIP

1.98e-045942GO:0030981
GeneOntologyCellularComponentcortical cytoskeleton

CLASP1 PDE4DIP ACTN1 ACTN2 RIMS2

2.93e-04129945GO:0030863
GeneOntologyCellularComponentnucleoplasmic periphery of the nuclear pore complex

HNRNPA1L2 HNRNPA1

2.97e-046942GO:1990826
GeneOntologyCellularComponentpresynaptic active zone

PPFIA4 PPFIA1 CACNA1H RIMS2 CACNA2D3

4.41e-04141945GO:0048786
GeneOntologyCellularComponentZ disc

MYL9 ANK2 BMP10 ACTN1 ACTN2

6.03e-04151945GO:0030018
GeneOntologyCellularComponentcell-substrate junction

IGF2R NCKAP1 CLASP1 PPFIA1 ARHGAP26 ACTN1 ACTN2 ERBIN

8.67e-04443948GO:0030055
GeneOntologyCellularComponentdense core granule membrane

VPS13C ACTN1

8.79e-0410942GO:0032127
GeneOntologyCellularComponentI band

MYL9 ANK2 BMP10 ACTN1 ACTN2

9.23e-04166945GO:0031674
GeneOntologyCellularComponentcatalytic step 2 spliceosome

RBM8A HNRNPA1L2 HNRNPA1 HNRNPA1L3

9.65e-0497944GO:0071013
GeneOntologyCellularComponentanchoring junction

USP53 IGF2R ANK2 NCKAP1 CLASP1 PCDHGA12 PPFIA1 ARHGAP26 PLCG1 ACTN1 ACTN2 ERBIN

1.41e-039769412GO:0070161
GeneOntologyCellularComponentcell cortex

MYL9 CLASP1 PDE4DIP ACTN1 ACTN2 EXOC7 RIMS2

1.43e-03371947GO:0005938
GeneOntologyCellularComponentmyofibril

MYL9 ANK2 BMP10 PDE4DIP ACTN1 ACTN2

1.46e-03273946GO:0030016
GeneOntologyCellularComponentpresynaptic cytoskeleton

NEFM RIMS2

1.76e-0314942GO:0099569
GeneOntologyCellularComponentdynein complex

DYNC2I1 DNAI4 DYNC1LI2

1.85e-0354943GO:0030286
GeneOntologyCellularComponentcontractile muscle fiber

MYL9 ANK2 BMP10 PDE4DIP ACTN1 ACTN2

1.99e-03290946GO:0043292
GeneOntologyCellularComponentpostsynapse

NEFM ANK2 NCKAP1 PPFIA1 DOCK10 NBEA CACNA1H ACTN1 ACTN2 DNAJC6 ERBIN SEZ6

2.01e-0310189412GO:0098794
MousePhenotongue muscle hypoplasia

HNRNPA1L2 HNRNPA1

2.99e-052772MP:0030421
DomainHnRNPA1

HNRNPA1L2 HNRNPA1

7.02e-053912PF11627
DomainVPS13

VPS13D VPS13C

7.02e-053912IPR026847
DomainVPS13_mid_rpt

VPS13D VPS13C

7.02e-053912PF16910
DomainVPS13

VPS13D VPS13C

7.02e-053912PF16908
DomainHnRNPA1

HNRNPA1L2 HNRNPA1

7.02e-053912IPR021662
DomainVPS13_N2

VPS13D VPS13C

7.02e-053912IPR031646
DomainVPS13_mid_rpt

VPS13D VPS13C

7.02e-053912IPR031642
DomainVPS13_C

VPS13D VPS13C

1.40e-044912PF16909
DomainSHR-BD

VPS13D VPS13C

1.40e-044912IPR009543
DomainVPS13_C

VPS13D VPS13C

1.40e-044912IPR031645
DomainSHR-BD

VPS13D VPS13C

1.40e-044912PF06650
DomainSpectrin

ACTN1 ACTN2 MCF2L

1.85e-0423913PF00435
DomainEF-hand_Ca_insen

ACTN1 ACTN2

3.48e-046912IPR014837
DomainLiprin

PPFIA4 PPFIA1

3.48e-046912IPR029515
DomainEFhand_Ca_insen

ACTN1 ACTN2

3.48e-046912PF08726
DomainSpectrin_repeat

ACTN1 ACTN2 MCF2L

3.73e-0429913IPR002017
DomainSpectrin/alpha-actinin

ACTN1 ACTN2 MCF2L

5.01e-0432913IPR018159
DomainSPEC

ACTN1 ACTN2 MCF2L

5.01e-0432913SM00150
DomainVPS13_N

VPS13D VPS13C

6.45e-048912IPR026854
DomainChorein_N

VPS13D VPS13C

6.45e-048912PF12624
DomainDnaJ

DNAJB7 SEC63 DNAJC6

1.65e-0348913PF00226
DomainDNAJ_1

DNAJB7 SEC63 DNAJC6

1.75e-0349913PS00636
DomainDNAJ_2

DNAJB7 SEC63 DNAJC6

1.75e-0349913PS50076
DomainDnaJ

DNAJB7 SEC63 DNAJC6

1.75e-0349913SM00271
Domain-

DNAJB7 SEC63 DNAJC6

1.75e-03499131.10.287.110
DomainDnaJ_domain

DNAJB7 SEC63 DNAJC6

1.97e-0351913IPR001623
DomainZnf_ZZ

TADA2A HERC2

3.80e-0319912IPR000433
DomainZnF_ZZ

TADA2A HERC2

3.80e-0319912SM00291
DomainSAM_1

PPFIA4 PPFIA1 L3MBTL3

4.46e-0368913PF00536
DomainEF_HAND_2

MYL9 NUCB2 PLCG1 ACTN1 ACTN2

5.44e-03231915PS50222
DomainEF_hand_dom

MYL9 NUCB2 PLCG1 ACTN1 ACTN2

5.54e-03232915IPR002048
DomainActinin_actin-bd_CS

ACTN1 ACTN2

5.56e-0323912IPR001589
DomainACTININ_2

ACTN1 ACTN2

5.56e-0323912PS00020
DomainACTININ_1

ACTN1 ACTN2

5.56e-0323912PS00019
DomainARM-type_fold

USP34 CLASP1 NBEA PPP6R1 DIAPH3 UNC79

6.26e-03339916IPR016024
PathwayREACTOME_RAC1_GTPASE_CYCLE

NCKAP1 NISCH ARHGAP26 DOCK10 DIAPH3 MCF2L ERBIN

2.50e-05175707MM15599
PathwayREACTOME_RAC1_GTPASE_CYCLE

NCKAP1 NISCH ARHGAP26 DOCK10 DIAPH3 MCF2L ERBIN

3.45e-05184707M41809
PathwayREACTOME_SIGNALING_BY_RHO_GTPASES_MIRO_GTPASES_AND_RHOBTB3

CCDC88A MYL9 NCKAP1 CLASP1 NISCH ARHGAP26 DOCK10 ACTN1 DIAPH3 MCF2L ERBIN DYNC1LI2 KNL1

4.61e-057207013M41838
PathwayREACTOME_RAC2_GTPASE_CYCLE

NCKAP1 ARHGAP26 DOCK10 DIAPH3 ERBIN

7.04e-0587705MM15600
PathwayREACTOME_RAC2_GTPASE_CYCLE

NCKAP1 ARHGAP26 DOCK10 DIAPH3 ERBIN

7.43e-0588705M41810
PathwayREACTOME_SIGNALING_BY_RHO_GTPASES_MIRO_GTPASES_AND_RHOBTB3

CCDC88A MYL9 NCKAP1 CLASP1 NISCH ARHGAP26 DOCK10 ACTN1 DIAPH3 MCF2L ERBIN DYNC1LI2

7.50e-056497012MM15690
PathwayREACTOME_RAC3_GTPASE_CYCLE

NCKAP1 ARHGAP26 DOCK10 DIAPH3 ERBIN

9.68e-0593705MM15609
PathwayREACTOME_RAC3_GTPASE_CYCLE

NCKAP1 ARHGAP26 DOCK10 DIAPH3 ERBIN

1.02e-0494705M41818
PathwayREACTOME_RHO_GTPASE_CYCLE

CCDC88A NCKAP1 NISCH ARHGAP26 DOCK10 ACTN1 DIAPH3 MCF2L ERBIN

3.06e-04439709MM15595
PathwayREACTOME_RHO_GTPASE_CYCLE

CCDC88A NCKAP1 NISCH ARHGAP26 DOCK10 ACTN1 DIAPH3 MCF2L ERBIN

3.67e-04450709M27078
PathwayREACTOME_RHOB_GTPASE_CYCLE

ARHGAP26 DIAPH3 MCF2L ERBIN

3.78e-0469704MM15596
PathwayREACTOME_RHOB_GTPASE_CYCLE

ARHGAP26 DIAPH3 MCF2L ERBIN

3.99e-0470704M41806
PathwayREACTOME_RHOC_GTPASE_CYCLE

ARHGAP26 DIAPH3 MCF2L ERBIN

3.99e-0470704MM15597
PathwayPID_CDC42_REG_PATHWAY

DOCK10 PLCG1 MCF2L

4.32e-0430703M83
PathwayREACTOME_RHOC_GTPASE_CYCLE

ARHGAP26 DIAPH3 MCF2L ERBIN

4.94e-0474704M41807
PathwayREACTOME_DEFECTIVE_CSF2RB_CAUSES_SMDP5

SFTPA2 SFTPA1

6.68e-048702M27575
Pubmed

In-Depth In Vivo Crosslinking in Minutes by a Compact, Membrane-Permeable, and Alkynyl-Enrichable Crosslinker.

MRPS31 PDIA4 NEFM SAFB ANK2 ATRX PCDHGA12 CTR9 PPFIA4 SMCHD1 PPFIA1 NUCB2 HNRNPA1L2 ACTN1 ACTN2 DIAPH3 CPOX MCF2L RIMS2 HNRNPA1 ERBIN PCDHGA8 IMMT

5.03e-121442952335575683
Pubmed

KCTD13-mediated ubiquitination and degradation of GluN1 regulates excitatory synaptic transmission and seizure susceptibility.

NEFM SAFB MGAT3 ANK2 NCKAP1 CLASP1 PPFIA4 NISCH PPFIA1 ARHGAP26 PDE4DIP FTH1 YTHDC2 NBEA HNRNPA1L2 ACTN1 ACTN2 DNAJC6 HNRNPA1 ERBIN IMMT CACNA2D3

3.23e-111431952237142655
Pubmed

Comprehensive interactome profiling of the human Hsp70 network highlights functional differentiation of J domains.

MRPS31 PDIA4 CCDC88A IGF2R ANK2 ATRX CTR9 NISCH PPFIA1 NUCB2 CEP131 DNAJB7 PPP6R1 ADI1 DIAPH3 HERC2 SEC63 ARFIP1 DNAJC6 HNRNPA1 ERBIN IMMT

6.73e-111487952233957083
Pubmed

An antibody-based proximity labeling map reveals mechanisms of SARS-CoV-2 inhibition of antiviral immunity.

PDIA4 USP34 CCDC88A IGF2R CLASP1 VPS13C PPFIA1 NUCB2 DYNC2I1 CEP131 N4BP1 SEC63 EXOC7 ERBIN DYNC1LI2 KNL1

1.52e-10733951634672954
Pubmed

BioID-based intact cell interactome of the Kv1.3 potassium channel identifies a Kv1.3-STAT3-p53 cellular signaling pathway.

PDIA4 EPHX1 CCDC88A IGF2R ANK2 NCKAP1 PPFIA1 YTHDC2 DIAPH3 SEC63 TAF7 ARFIP1 HNRNPA1 ERBIN IMMT

9.04e-10708951539231216
Pubmed

Spatiotemporal profile of postsynaptic interactomes integrates components of complex brain disorders.

ZNF462 NEFM CCDC88A IGF2R ANK2 NCKAP1 CLASP1 NISCH PPFIA1 PDE4DIP NBEA CEP131 PPP6R1 HERC2 DNAJC6 UNC79 ERBIN

9.73e-10963951728671696
Pubmed

A Human Tyrosine Phosphatase Interactome Mapped by Proteomic Profiling.

PDIA4 USP34 CLASP1 CTR9 SMCHD1 PPFIA1 ARHGAP26 YTHDC2 AASDHPPT HNRNPA1L2 PPP6R1 PLCG1 DIAPH3 CPOX SEC63 DNAJC6 IMMT

1.15e-09974951728675297
Pubmed

Prediction of the coding sequences of mouse homologues of KIAA gene: II. The complete nucleotide sequences of 400 mouse KIAA-homologous cDNAs identified by screening of terminal sequences of cDNA clones randomly sampled from size-fractionated libraries.

NCKAP1 CLASP1 GCC2 SGSM2 NISCH PDE4DIP DOCK10 CACNA1H PPP6R1 MCF2L DNAJC6 ERBIN

1.28e-09407951212693553
Pubmed

Proximity-dependent biotin identification (BioID) reveals a dynamic LSD1-CoREST interactome during embryonic stem cell differentiation.

ZNF462 NEFM USP34 CCDC88A GCC2 PPFIA1 CEP131 PPP6R1 TADA2A DIAPH3 L3MBTL3 KNL1

1.73e-09418951234709266
Pubmed

Genome-wide CRISPR screen identifies HNRNPL as a prostate cancer dependency regulating RNA splicing.

ZNF462 USP53 ATRX PLPP1 VPS13C GCC2 SGSM2 NUCB2 AUTS2 DYNC2I1 CACNA1H PLCG1 MSH5 ADI1 MCF2L PRDM15 ERBIN NOTCH3 ITFG1

1.81e-081489951928611215
Pubmed

A high-throughput approach for measuring temporal changes in the interactome.

PDIA4 USP34 PCYT1A MYL9 NCKAP1 CTR9 PPFIA1 NUCB2 FTH1 AASDHPPT N4BP1 PLCG1 ACTN1 PHAX ARFIP1 HNRNPA1 DYNC1LI2 IWS1

7.22e-081455951822863883
Pubmed

Interactomes of Glycogen Synthase Kinase-3 Isoforms.

VPS13D CCDC88A CLASP1 PPFIA1 YTHDC2 CEP131 PPP6R1 ERBIN

1.15e-0720995836779422
Pubmed

Defining the proximal interaction networks of Arf GTPases reveals a mechanism for the regulation of PLD1 and PI4KB.

MRPS31 USP34 CCDC88A IGF2R VPS13C GCC2 PPFIA1 NBEA CEP131 ARFIP1 HNRNPA1 ERBIN DYNC1LI2

2.03e-07777951335844135
Pubmed

Disrupted in Schizophrenia 1 Interactome: evidence for the close connectivity of risk genes and a potential synaptic basis for schizophrenia.

NEFM CCDC88A ANK2 PDE4DIP NBEA EXOC7 IMMT

2.03e-0715195717043677
Pubmed

Chr21 protein-protein interactions: enrichment in proteins involved in intellectual disability, autism, and late-onset Alzheimer's disease.

NEFM USP34 PCYT1A ANK2 ATRX CTR9 SGSM2 NISCH PDE4DIP DYNC2I1 NBEA PLCG1 ACTN1 HERC2 EXOC7 IMMT

3.89e-071285951635914814
Pubmed

Surfactant lipid synthesis and lamellar body formation in glycogen-laden type II cells.

PCYT1A SFTPA2 SFTPA1

3.93e-07695315169678
Pubmed

Stella is a maternal effect gene required for normal early development in mice.

ATRX HNRNPA1L2 HNRNPA1

3.93e-07695314654002
Pubmed

An organelle-specific protein landscape identifies novel diseases and molecular mechanisms.

MRPS31 NEFM CCDC88A ATRX NCKAP1 CLASP1 CTR9 GCC2 NISCH ARHGAP26 DYNC2I1 CEP131 ACTN1 EXOC7 IMMT DYNC1LI2

5.60e-071321951627173435
Pubmed

Direct interaction between hnRNP-M and CDC5L/PLRG1 proteins affects alternative splice site choice.

ATRX CLASP1 SMCHD1 PPFIA1 YTHDC2 DIAPH3 EXOC7 ARFIP1 HNRNPA1 DYNC1LI2 KNL1

5.76e-07582951120467437
Pubmed

HENA, heterogeneous network-based data set for Alzheimer's disease.

CCDC88A PDE4DIP PLCG1 ACTN2 HERC2 IMMT

1.01e-0612095631413325
Pubmed

hnRNP A1B, a Splice Variant of HNRNPA1, Is Spatially and Temporally Regulated.

NEFM HNRNPA1L2 HNRNPA1

1.09e-06895334630013
Pubmed

Protocadherin Celsr3 is crucial in axonal tract development.

NEFM SFTPA2 SFTPA1

1.09e-06895315778712
Pubmed

A comprehensive SARS-CoV-2-human protein-protein interactome reveals COVID-19 pathobiology and potential host therapeutic targets.

PDIA4 IGF2R MYL9 CTR9 PDE4DIP ACTN1 ACTN2 SEC63 HNRNPA1 IMMT

1.23e-06503951036217030
Pubmed

A probability-based approach for high-throughput protein phosphorylation analysis and site localization.

PCYT1A SAFB CTR9 GCC2 FTH1 CEP131 RBM8A EXOC7 DYNC1LI2 IWS1

1.23e-06503951016964243
Pubmed

Overlapping Activities of Two Neuronal Splicing Factors Switch the GABA Effect from Excitatory to Inhibitory by Regulating REST.

NEFM USP34 CLASP1 VPS13C DOCK10 RIMS2

1.47e-0612895630995482
Pubmed

Gain of Additional BIRC3 Protein Functions through 3'-UTR-Mediated Protein Complex Formation.

MRPS31 PDIA4 EPHX1 SAFB IGF2R ATRX NCKAP1 CTR9 VPS13C SMCHD1 YTHDC2 PLCG1 CPOX SEC63 HNRNPA1 IMMT

1.51e-061425951630948266
Pubmed

N-Terminal Acetyltransferase Naa40p Whereabouts Put into N-Terminal Proteoform Perspective.

SAFB ANK2 ATRX SMCHD1 YTHDC2 AASDHPPT PPP6R1 PLCG1 PHAX ARFIP1 HNRNPA1 ERBIN KNL1

1.59e-06934951333916271
Pubmed

Charting the landscape of tandem BRCT domain-mediated protein interactions.

PCYT1A SAFB CCDC88A SMCHD1 WBP1L AASDHPPT PPP6R1 TADA2A PHAX HNRNPA1 IMMT

2.26e-06670951122990118
Pubmed

Sim2 mutants have developmental defects not overlapping with those of Sim1 mutants.

NEFM SFTPA2 SFTPA1

2.34e-061095312024028
Pubmed

Ex vivo Quantitative Proteomic Analysis of Serotonin Transporter Interactome: Network Impact of the SERT Ala56 Coding Variant.

NEFM NCKAP1 CLASP1 VPS13C ARHGAP26 DYNC2I1 ACTN1 HERC2 ERBIN

2.85e-0643095932581705
Pubmed

The STUbL RNF4 regulates protein group SUMOylation by targeting the SUMO conjugation machinery.

PDIA4 ZNF462 EPHX1 USP34 ZNF16 SAFB IGF2R NCKAP1 CLASP1 AUTS2 ACTN1 SEC63 HNRNPA1 ITFG1

4.89e-061203951429180619
Pubmed

Yeast two-hybrid screens implicate DISC1 in brain development and function.

MGAT3 PPFIA4 IMMT

5.54e-061395314623284
Pubmed

Phenotypic and Interaction Profiling of the Human Phosphatases Identifies Diverse Mitotic Regulators.

PDIA4 CCDC88A IGF2R CTR9 PPFIA1 NBEA CEP131 PPP6R1 HERC2 L3MBTL3 ERBIN KNL1 IWS1

5.63e-061049951327880917
Pubmed

Long-term potentiation modulates synaptic phosphorylation networks and reshapes the structure of the postsynaptic interactome.

NEFM ANK2 NCKAP1 NBEA PPP6R1 DNAJC6 ERBIN

6.04e-0625195727507650
Pubmed

A novel role for the peptidyl-prolyl cis-trans isomerase Cyclophilin A in DNA-repair following replication fork stalling via the MRE11-RAD50-NBS1 complex.

SAFB IGF2R CLASP1 CEP131 PHAX ARFIP1 ERBIN DYNC1LI2 KNL1

6.06e-0647295938943005
Pubmed

Major Effect of Oxidative Stress on the Male, but Not Female, SP-A1 Type II Cell miRNome.

SFTPA2 SFTPA1

7.38e-06295231354704
Pubmed

Signaling Pathways That Mediate Alveolar Macrophage Activation by Surfactant Protein A and IL-4.

SFTPA2 SFTPA1

7.38e-06295235444643
Pubmed

Surfactant-associated protein A inhibits LPS-induced cytokine and nitric oxide production in vivo.

SFTPA2 SFTPA1

7.38e-06295210749762
Pubmed

The flagellum of Pseudomonas aeruginosa is required for resistance to clearance by surfactant protein A.

SFTPA2 SFTPA1

7.38e-06295217593964
Pubmed

Post-translational modifications of hnRNP A1 differentially modulate retroviral IRES-mediated translation initiation.

HNRNPA1L2 HNRNPA1

7.38e-06295232960212
Pubmed

siDirect: highly effective, target-specific siRNA design software for mammalian RNA interference.

HNRNPA1L2 HNRNPA1

7.38e-06295215215364
Pubmed

Studies of the structure of lung surfactant protein SP-A.

SFTPA2 SFTPA1

7.38e-0629522610270
Pubmed

Phosphorylation of hnRNP A1-Serine 199 Is Not Required for T Cell Differentiation and Function.

HNRNPA1L2 HNRNPA1

7.38e-06295238334757
Pubmed

Surfactant protein-A binds group B streptococcus enhancing phagocytosis and clearance from lungs of surfactant protein-A-deficient mice.

SFTPA2 SFTPA1

7.38e-0629529922219
Pubmed

Maternal surfactant protein A influences the immunoprotective properties of milk in a murine model.

SFTPA2 SFTPA1

7.38e-06295224858142
Pubmed

Surfactant protein-A--deficient mice display an exaggerated early inflammatory response to a beta-resistant strain of influenza A virus.

SFTPA2 SFTPA1

7.38e-06295211867335
Pubmed

Pneumocystis murina colonization in immunocompetent surfactant protein A deficient mice following environmental exposure.

SFTPA2 SFTPA1

7.38e-06295219228388
Pubmed

SP-A preserves airway homeostasis during Mycoplasma pneumoniae infection in mice.

SFTPA2 SFTPA1

7.38e-06295219494306
Pubmed

An 11-nt sequence polymorphism at the 3'UTR of human SFTPA1 and SFTPA2 gene variants differentially affect gene expression levels and miRNA regulation in cell culture.

SFTPA2 SFTPA1

7.38e-06295224793167
Pubmed

Sex differences in the acute in vivo effects of different human SP-A variants on the mouse alveolar macrophage proteome.

SFTPA2 SFTPA1

7.38e-06295224954098
Pubmed

Characterization of a second human pulmonary surfactant-associated protein SP-A gene.

SFTPA2 SFTPA1

7.38e-0629521372511
Pubmed

Lung effector memory and activated CD4+ T cells display enhanced proliferation in surfactant protein A-deficient mice during allergen-mediated inflammation.

SFTPA2 SFTPA1

7.38e-06295221257967
Pubmed

Retroviral insertions downstream of the heterogeneous nuclear ribonucleoprotein A1 gene in erythroleukemia cells: evidence that A1 is not essential for cell growth.

HNRNPA1L2 HNRNPA1

7.38e-0629521406633
Pubmed

The Pseudomonas aeruginosa flagellum confers resistance to pulmonary surfactant protein-A by impacting the production of exoproteases through quorum-sensing.

SFTPA2 SFTPA1

7.38e-06295221205009
Pubmed

Surfactant protein A modulates neuroinflammation in adult mice upon pulmonary infection.

SFTPA2 SFTPA1

7.38e-06295238964703
Pubmed

Differential Regulation of Human Surfactant Protein A Genes, SFTPA1 and SFTPA2, and Their Corresponding Variants.

SFTPA2 SFTPA1

7.38e-06295234917085
Pubmed

Surfactant protein A integrates activation signal strength to differentially modulate T cell proliferation.

SFTPA2 SFTPA1

7.38e-06295222219327
Pubmed

Surfactant protein A is a principal and oxidation-sensitive microbial permeabilizing factor in the alveolar lining fluid.

SFTPA2 SFTPA1

7.38e-06295215890661
Pubmed

Enhanced lung injury and delayed clearance of Pneumocystis carinii in surfactant protein A-deficient mice: attenuation of cytokine responses and reactive oxygen-nitrogen species.

SFTPA2 SFTPA1

7.38e-06295215385504
Pubmed

A TLR4-interacting SPA4 peptide inhibits LPS-induced lung inflammation.

SFTPA2 SFTPA1

7.38e-06295223475791
Pubmed

Surfactant protein A associated with respiratory distress syndrome in Korean preterm infants: evidence of ethnic difference.

SFTPA2 SFTPA1

7.38e-06295223038062
Pubmed

Surfactant protein A binds flagellin enhancing phagocytosis and IL-1β production.

SFTPA2 SFTPA1

7.38e-06295224312669
Pubmed

Correlation analysis between single nucleotide polymorphisms of pulmonary surfactant protein A gene and pulmonary tuberculosis in the Han population in China.

SFTPA2 SFTPA1

7.38e-06295224984162
Pubmed

Effect of cysteine 85 on biochemical properties and biological function of human surfactant protein A variants.

SFTPA2 SFTPA1

7.38e-06295217580966
Pubmed

Isolation and characterization of cDNA clones for the 35-kDa pulmonary surfactant-associated protein.

SFTPA2 SFTPA1

7.38e-0629523755136
Pubmed

Differential effects of innate immune variants of surfactant protein-A1 (SFTPA1) and SP-A2 (SFTPA2) in airway function after Klebsiella pneumoniae infection and sex differences.

SFTPA2 SFTPA1

7.38e-06295229394894
Pubmed

Surfactant protein-A suppresses eosinophil-mediated killing of Mycoplasma pneumoniae in allergic lungs.

SFTPA2 SFTPA1

7.38e-06295222384248
Pubmed

Heterogeneous nuclear ribonucleoprotein A1 regulates rhythmic synthesis of mouse Nfil3 protein via IRES-mediated translation.

HNRNPA1L2 HNRNPA1

7.38e-06295228220845
Pubmed

Surfactant protein A enhances production of secretory leukoprotease inhibitor and protects it from cleavage by matrix metalloproteinases.

SFTPA2 SFTPA1

7.38e-06295219155504
Pubmed

Surfactant Protein A can Affect the Surface Tension of the Eustachian Tube and Macrophage Migration.

SFTPA2 SFTPA1

7.38e-06295236102297
Pubmed

Role of surfactant protein-A (SP-A) in lung injury in response to acute ozone exposure of SP-A deficient mice.

SFTPA2 SFTPA1

7.38e-06295217307210
Pubmed

Surfactant protein A modulates induction of regulatory T cells via TGF-β.

SFTPA2 SFTPA1

7.38e-06295222474025
Pubmed

The collagen-like region of surfactant protein A (SP-A) is required for correction of surfactant structural and functional defects in the SP-A null mouse.

SFTPA2 SFTPA1

7.38e-06295211504713
Pubmed

Surfactant protein A promotes western diet-induced hepatic steatosis and fibrosis in mice.

SFTPA2 SFTPA1

7.38e-06295238553537
Pubmed

Surfactant protein A reduces TLR4 and inflammatory cytokine mRNA levels in neonatal mouse ileum.

SFTPA2 SFTPA1

7.38e-06295233510368
Pubmed

Genetic complexity of the human innate host defense molecules, surfactant protein A1 (SP-A1) and SP-A2--impact on function.

SFTPA2 SFTPA1

7.38e-06295219392648
Pubmed

Polymorphisms in the surfactant protein a gene are associated with the susceptibility to recurrent urinary tract infection in chinese women.

SFTPA2 SFTPA1

7.38e-06295220448439
Pubmed

Humanized SFTPA1 and SFTPA2 transgenic mice reveal functional divergence of SP-A1 and SP-A2: formation of tubular myelin in vivo requires both gene products.

SFTPA2 SFTPA1

7.38e-06295220048345
Pubmed

Functional assessment and phenotypic heterogeneity of SFTPA1 and SFTPA2 mutations in interstitial lung diseases and lung cancer.

SFTPA2 SFTPA1

7.38e-06295232855221
Pubmed

Surfactant protein A suppresses lipopolysaccharide-induced IL-10 production by murine macrophages.

SFTPA2 SFTPA1

7.38e-06295211342662
Pubmed

Novel Pathological Role of hnRNPA1 (Heterogeneous Nuclear Ribonucleoprotein A1) in Vascular Smooth Muscle Cell Function and Neointima Hyperplasia.

HNRNPA1L2 HNRNPA1

7.38e-06295228912364
Pubmed

Surfactant protein A-deficient mice are susceptible to group B streptococcal infection.

SFTPA2 SFTPA1

7.38e-0629529126996
Pubmed

Type IV pilus of Pseudomonas aeruginosa confers resistance to antimicrobial activities of the pulmonary surfactant protein-A.

SFTPA2 SFTPA1

7.38e-06295224080545
Pubmed

Lung development in the mouse embryo.

SFTPA2 SFTPA1

7.38e-0629522050021
Pubmed

hnRNP A1 dysfunction in oligodendrocytes contributes to the pathogenesis of multiple sclerosis.

HNRNPA1L2 HNRNPA1

7.38e-06295236382566
Pubmed

Murine pulmonary surfactant SP-A gene: cloning, sequence, and transcriptional activity.

SFTPA2 SFTPA1

7.38e-0629521443158
Pubmed

Surfactant Protein A and B Gene Polymorphisms and Risk of Respiratory Distress Syndrome in Late-Preterm Neonates.

SFTPA2 SFTPA1

7.38e-06295227835691
Pubmed

Genetic Variation in Surfactant Protein-A2 Delays Resolution of Eosinophilia in Asthma.

SFTPA2 SFTPA1

7.38e-06295231350355
Pubmed

Genetic complexity of the human surfactant-associated proteins SP-A1 and SP-A2.

SFTPA2 SFTPA1

7.38e-06295223069847
Pubmed

Ablation of SP-A has a negative impact on the susceptibility of mice to Klebsiella pneumoniae infection after ozone exposure: sex differences.

SFTPA2 SFTPA1

7.38e-06295219055785
Pubmed

Human Surfactant Protein SP-A1 and SP-A2 Variants Differentially Affect the Alveolar Microenvironment, Surfactant Structure, Regulation and Function of the Alveolar Macrophage, and Animal and Human Survival Under Various Conditions.

SFTPA2 SFTPA1

7.38e-06295234484180
Pubmed

Surfactant protein A limits Pneumocystis murina infection in immunosuppressed C3H/HeN mice and modulates host response during infection.

SFTPA2 SFTPA1

7.38e-06295215857803
Pubmed

Surfactant protein-A reduces translocation of mediators from the lung into the circulation.

SFTPA2 SFTPA1

7.38e-06295220715984
Pubmed

Effects of surfactant protein-A on the interaction of Pneumocystis murina with its host at different stages of the infection in mice.

SFTPA2 SFTPA1

7.38e-06295219335775
Pubmed

Altered surfactant protein A gene expression and protein metabolism associated with repeat exposure to inhaled endotoxin.

SFTPA2 SFTPA1

7.38e-06295212922979
Pubmed

Cryptococcus neoformans is resistant to surfactant protein A mediated host defense mechanisms.

SFTPA2 SFTPA1

7.38e-06295218159253
Pubmed

Differences in the alveolar macrophage toponome in humanized SP-A1 and SP-A2 transgenic mice.

SFTPA2 SFTPA1

7.38e-06295233141765
Pubmed

Regulatory roles of SP-A and exosomes in pneumonia-induced acute lung and kidney injuries.

SFTPA2 SFTPA1

7.38e-06295237256132
Pubmed

Surfactant protein a attenuates generalized and localized neuroinflammation in neonatal mice.

SFTPA2 SFTPA1

7.38e-06295236871846
Pubmed

Innate immunity of surfactant protein A in experimental otitis media.

SFTPA2 SFTPA1

7.38e-06295231378117
InteractionLTK interactions

MRPS31 PDIA4 SAFB CCDC88A PPFIA1 NBEA PLCG1 ERBIN IMMT

3.49e-08152939int:LTK
InteractionDISC1 interactions

NEFM MGAT3 CCDC88A IGF2R PPFIA4 PDE4DIP PPP6R1 PLCG1 ACTN1 ACTN2 HERC2 EXOC7 IMMT

8.52e-084299313int:DISC1
InteractionDYNLRB1 interactions

SAFB CCDC88A ATRX CLASP1 DYNC2I1 DYNC1LI2 ITFG1

2.26e-0792937int:DYNLRB1
InteractionPHF21A interactions

NEFM USP34 CCDC88A GCC2 PPFIA1 CEP131 PPP6R1 TADA2A DIAPH3 L3MBTL3 KNL1

5.20e-073439311int:PHF21A
InteractionGADD45G interactions

PDIA4 PDE4DIP RASSF10 ACTN1 RBM48 PHAX

1.74e-0679936int:GADD45G
InteractionKCNA3 interactions

PDIA4 EPHX1 CCDC88A IGF2R ANK2 NCKAP1 PPFIA1 DOCK10 YTHDC2 DIAPH3 SEC63 TAF7 ARFIP1 HNRNPA1 ERBIN IMMT

2.17e-068719316int:KCNA3
InteractionRCOR1 interactions

NEFM USP34 CCDC88A GCC2 PPFIA1 CEP131 PPP6R1 TADA2A DNAJC6 L3MBTL3 KNL1 ITFG1

2.84e-064949312int:RCOR1
InteractionMAPRE1 interactions

NEFM CCDC88A CLASP1 GCC2 PDE4DIP CEP131 RBM8A ACTN1 DIAPH3 HERC2 DNAJC6 DYNC1LI2

4.26e-065149312int:MAPRE1
InteractionAGAP2 interactions

NEFM ANK2 NCKAP1 PPFIA1 NBEA PLCG1 ACTN1 RIMS2

5.80e-06210938int:AGAP2
InteractionKDM1A interactions

ZNF462 NEFM USP34 CCDC88A GCC2 PPFIA1 PDE4DIP CEP131 PPP6R1 TADA2A DIAPH3 EXOC7 DNAJC6 L3MBTL3 IMMT KNL1

5.82e-069419316int:KDM1A
InteractionLAMP1 interactions

MRPS31 PDIA4 CCDC88A IGF2R NCKAP1 CLASP1 NISCH PPFIA1 NBEA SEC63 HNRNPA1 ERBIN IMMT

7.97e-066449313int:LAMP1
InteractionCDC14A interactions

CLASP1 SMCHD1 PPFIA1 YTHDC2 CEP131 PPP6R1

1.26e-05111936int:CDC14A
InteractionKCTD13 interactions

NEFM MGAT3 ANK2 NCKAP1 CLASP1 PPFIA4 NISCH PPFIA1 ARHGAP26 FTH1 YTHDC2 NBEA ACTN1 ACTN2 DNAJC6 HNRNPA1 ERBIN IMMT CACNA2D3

1.68e-0513949319int:KCTD13
InteractionARL14 interactions

MRPS31 IGF2R PPFIA1 NBEA ARFIP1 ERBIN

1.87e-05119936int:ARL14
InteractionRAB11A interactions

NEFM CCDC88A IGF2R VPS13C GCC2 NISCH PPFIA1 NBEA PLCG1 DIAPH3 EXOC7 ARFIP1 ERBIN DYNC1LI2

2.61e-058309314int:RAB11A
InteractionENTPD1 interactions

USP34 PDE4DIP DYNC2I1

5.10e-0516933int:ENTPD1
InteractionTNIK interactions

ZNF462 NEFM ANK2 NCKAP1 CLASP1 PDE4DIP NBEA HERC2 DYNC1LI2

6.67e-05381939int:TNIK
InteractionZNF764 interactions

MRPS31 USP34 NISCH YTHDC2 ERBIN

7.08e-0593935int:ZNF764
InteractionRAB9A interactions

VPS13D IGF2R VPS13C GCC2 SGSM2 NISCH PPFIA1 NBEA SEC63 ARFIP1 IMMT

9.23e-055959311int:RAB9A
InteractionSHANK3 interactions

NEFM IGF2R ANK2 NCKAP1 PPP6R1 ACTN1 ACTN2 EXOC7 DNAJC6 NOTCH3

9.68e-054969310int:SHANK3
InteractionCDC42 interactions

PCYT1A CCDC88A IGF2R NISCH PPFIA1 ARHGAP26 FTH1 DOCK10 RBM8A DIAPH3 HERC2 TAF7 MCF2L PHAX HNRNPA1 ERBIN IMMT

1.04e-0413239317int:CDC42
InteractionRHOA interactions

VPS13D CCDC88A IGF2R NCKAP1 VPS13C NISCH PPFIA1 ARHGAP26 PLCG1 DIAPH3 SEC63 TAF7 MCF2L ARFIP1 ERBIN IMMT

1.11e-0411999316int:RHOA
InteractionFGFR2 interactions

SAFB CCDC88A IGF2R RBM8A PLCG1 ERBIN IWS1

1.20e-04239937int:FGFR2
InteractionFGFR1 interactions

MRPS31 PDIA4 CCDC88A ANK2 NCKAP1 NISCH PPFIA1 NBEA PLCG1 SEC63 IMMT

1.57e-046329311int:FGFR1
InteractionRAPGEF5 interactions

PDIA4 CCDC88A ANK2 PLCG1

1.70e-0460934int:RAPGEF5
InteractionGSK3B interactions

PDIA4 VPS13D CCDC88A NCKAP1 CLASP1 PPFIA1 YTHDC2 CEP131 PPP6R1 ACTN1 HERC2 ERBIN NOTCH3

1.72e-048689313int:GSK3B
InteractionSLC6A4 interactions

NEFM NCKAP1 CLASP1 VPS13C ARHGAP26 DYNC2I1 ACTN1 HERC2 ERBIN

1.88e-04437939int:SLC6A4
InteractionNAA11 interactions

NEFM CCDC88A PDE4DIP KNL1

1.93e-0462934int:NAA11
InteractionRHOQ interactions

CCDC88A IGF2R VPS13C NISCH PPFIA1 DIAPH3 EXOC7 ERBIN IMMT

2.04e-04442939int:RHOQ
InteractionGOLGA1 interactions

IGF2R GCC2 CEP131 PPP6R1 DIAPH3 ITFG1

2.05e-04183936int:GOLGA1
InteractionOR9Q2 interactions

HNRNPA1L2 HNRNPA1

2.09e-045932int:OR9Q2
InteractionH1-2 interactions

PDIA4 PRDM10 IGF2R ANK2 ATRX CTR9 YTHDC2 CPOX PHAX PRDM15 ITFG1

2.46e-046669311int:H1-2
InteractionGJD3 interactions

CCDC88A IGF2R VPS13C GCC2 NISCH PPFIA1 SEC63 ARFIP1 ERBIN

2.49e-04454939int:GJD3
InteractionATG16L1 interactions

SAFB CCDC88A IGF2R VPS13C GCC2 PPFIA1 YTHDC2 CEP131 PPP6R1 DIAPH3 TAF7 HNRNPA1 ERBIN IMMT KNL1

2.64e-0411619315int:ATG16L1
InteractionRAB2A interactions

CCDC88A IGF2R PLPP1 VPS13C GCC2 SGSM2 NISCH PPFIA1 NBEA ARFIP1

2.86e-045679310int:RAB2A
InteractionRPL7A interactions

ZNF16 PRDM10 ATRX YTHDC2 DNAJB7 RBM8A PPP6R1 HERC2 PHAX PRDM15 ITFG1

2.91e-046799311int:RPL7A
InteractionGSK3A interactions

VPS13D CCDC88A CLASP1 PPFIA1 YTHDC2 CEP131 RBM8A PPP6R1 ERBIN

2.93e-04464939int:GSK3A
InteractionRHOD interactions

CCDC88A IGF2R NCKAP1 NISCH PPFIA1 ACTN1 DIAPH3 SEC63 ERBIN IMMT

3.06e-045729310int:RHOD
InteractionAXL interactions

MRPS31 PDIA4 CCDC88A NUCB2 PLCG1 SEC63 ERBIN IMMT

3.08e-04369938int:AXL
Cytoband16q12.1

N4BP1 HNRNPA1L3 ITFG1

4.90e-053495316q12.1
Cytoband5q31

PCDHGA12 ARHGAP26 TAF7 PCDHGA8

9.98e-051159545q31
GeneFamilyActinins

ACTN1 ACTN2

7.14e-0546321112
GeneFamilyHyalectan proteoglycans|V-set domain containing|Sushi domain containing|C-type lectin domain containing

SFTPA2 SFTPA1 KLRC3

3.91e-04416331298
GeneFamilyCollectins

SFTPA2 SFTPA1

5.28e-0410632491
GeneFamilyDNAJ (HSP40) heat shock proteins|C2 tensin-type domain containing

DNAJB7 SEC63 DNAJC6

6.63e-0449633584
GeneFamilyRNA binding motif containing

SAFB RBM8A HNRNPA1L2 RBM48 HNRNPA1

8.74e-04213635725
GeneFamilyZinc fingers C2H2-type|PR/SET domain family

PRDM10 PRDM15

1.57e-03176321197
GeneFamilySterile alpha motif domain containing

PPFIA4 PPFIA1 L3MBTL3

3.58e-0388633760
GeneFamilyCalcium voltage-gated channel subunits

CACNA1H CACNA2D3

3.68e-0326632253
CoexpressionHAMAI_APOPTOSIS_VIA_TRAIL_UP

MRPS31 CCDC88A VPS13C GCC2 SMCHD1 PPFIA1 NUCB2 DOCK10 DYNC2I1 DIAPH3 SEC63 PHAX KNL1 ITFG1 IWS1

1.40e-086569515M18979
CoexpressionSHEN_SMARCA2_TARGETS_UP

ATRX NCKAP1 CTR9 VPS13C YTHDC2 AASDHPPT HERC2 RBM48 SEC63 TAF7 ARFIP1 ITFG1

5.09e-084299512M29
CoexpressionGABRIELY_MIR21_TARGETS

USP34 ATRX PLPP1 DOCK10 YTHDC2 NBEA SEC63 DYNC1LI2 KNL1

1.09e-06289959M2196
CoexpressionMURARO_PANCREAS_BETA_CELL

NEFM USP34 ATRX NCKAP1 VPS13C GCC2 NISCH PDE4DIP FTH1 DOCK10 NBEA CACNA1H SEC63 DNAJC6 UNC79

1.53e-069469515M39169
CoexpressionIBRAHIM_NRF1_UP

PCYT1A NCKAP1 CTR9 PPFIA1 FTH1 PHAX EXOC7 DNAJC6 HNRNPA1 IWS1

3.01e-064209510M42509
CoexpressionGSE21927_SPLENIC_VS_TUMOR_MONOCYTES_FROM_C26GM_TUMOROUS_MICE_BALBC_DN

ATRX CLASP1 GCC2 NISCH WBP1L ERBIN KLRC3

7.96e-06198957M7605
CoexpressionGSE7568_CTRL_VS_3H_TGFB_TREATED_MACROPHAGES_WITH_IL4_AND_DEXAMETHASONE_DN

GCC2 NISCH ARHGAP26 DNAI4 YTHDC2 PLCG1

3.33e-05167956M361
CoexpressionLAKE_ADULT_KIDNEY_C11_THIN_ASCENDING_LIMB

USP53 VPS13C GCC2 RIMS2 ERBIN CACNA2D3

3.56e-05169956M39230
CoexpressionMANNO_MIDBRAIN_NEUROTYPES_HNBGABA

ZNF462 CCDC88A ANK2 PPFIA4 PDE4DIP NBEA MCF2L RIMS2 DNAJC6 UNC79 SEZ6

4.83e-057039511M39070
CoexpressionHAHTOLA_MYCOSIS_FUNGOIDES_CD4_DN

NUCB2 YTHDC2 RBM8A ACTN1 HNRNPA1

6.30e-05115955M19849
CoexpressionGSE26928_NAIVE_VS_CENT_MEMORY_CD4_TCELL_UP

PRDM10 VPS13C YTHDC2 NBEA ACTN1 HERC2

7.23e-05192956M4677
CoexpressionGSE16385_IFNG_TNF_VS_UNSTIM_MACROPHAGE_ROSIGLITAZONE_TREATED_DN

MRPS31 AUTS2 ACTN1 RBM48 KLRC3 ITFG1

9.05e-05200956M8032
CoexpressionGSE29949_MICROGLIA_BRAIN_VS_MONOCYTE_BONE_MARROW_DN

PDIA4 USP34 VPS13D IGF2R PDE4DIP NUCB2

9.05e-05200956M8389
CoexpressionGSE27786_CD4_VS_CD8_TCELL_UP

ZNF462 PLPP1 TMEM191C NUCB2 CPOX IWS1

9.05e-05200956M4819
CoexpressionGSE24574_BCL6_HIGH_TFH_VS_TFH_CD4_TCELL_DN

USP34 SGSM2 NUCB2 FTH1 AUTS2 MCF2L

9.05e-05200956M8331
CoexpressionGSE6681_DELETED_FOXP3_VS_WT_TREG_DN

SAFB WBP1L NUCB2 SEC63 TAF7 PRDM15

9.05e-05200956M6779
CoexpressionGSE9006_HEALTHY_VS_TYPE_1_DIABETES_PBMC_4MONTH_POST_DX_UP

PDIA4 SAFB PPFIA1 ARHGAP26 SEC63 HNRNPA1

9.05e-05200956M5779
CoexpressionGSE40274_FOXP3_VS_FOXP3_AND_LEF1_TRANSDUCED_ACTIVATED_CD4_TCELL_DN

DYNC2I1 PLCG1 ACTN1 ACTN2 MCF2L HNRNPA1

9.05e-05200956M9188
CoexpressionBONOME_OVARIAN_CANCER_SURVIVAL_SUBOPTIMAL_DEBULKING

ZNF16 ADAMTS7 VPS13C YTHDC2 TADA2A MSH5 SEC63 EXOC7 HNRNPA1

9.37e-05506959M253
CoexpressionONKEN_UVEAL_MELANOMA_UP

IGF2R ANK2 SMCHD1 WBP1L PDE4DIP NUCB2 ADI1 HERC2 SEC63 HNRNPA1 NOTCH3

1.36e-047909511M12490
CoexpressionMARTORIATI_MDM4_TARGETS_FETAL_LIVER_DN

PCYT1A ATRX PPFIA1 WBP1L HNRNPA1L2 PPP6R1 SEC63 HNRNPA1 ERBIN

1.59e-04543959MM997
CoexpressionGSE3720_UNSTIM_VS_LPS_STIM_VD1_GAMMADELTA_TCELL_DN

PLPP1 NCKAP1 ARHGAP26 DOCK10 NOTCH3

1.94e-04146955M6341
ToppCelldroplet-Marrow-nan-3m|Marrow / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation

CCDC88A ATRX VPS13C GCC2 PPFIA4 SMCHD1 DOCK10 TAF7 ERBIN

2.28e-101849591154a5ad7b8512272b7476f949ddac350910bfb7
ToppCelldroplet-Marrow-nan-3m-Myeloid-nan|Marrow / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation

CCDC88A ATRX VPS13C GCC2 SMCHD1 ARHGAP26 DOCK10 ERBIN

5.53e-09182958f8c73baaaca145e2efc48f10f636feb79c8fc779
ToppCellTCGA-Pancreas-Primary_Tumor-Pancreatic_Adenocarcinoma-Ductal_Adenocarcinoma-1|TCGA-Pancreas / Sample_Type by Project: Shred V9

USP34 VPS13D PRDM10 ATRX GCC2 SMCHD1 ERBIN IWS1

6.56e-0918695803db813598b67b1e08f759758a1c2023396921fa
ToppCellPBMC_fresh-frozen-Mild-Moderate_progression_d12-25-Lymphocytic-Lymphocytic_T-mature_alpha-beta_T_cell-T_CD8_c01-LEF1|Mild-Moderate_progression_d12-25 / Compartment, severity and other cell annotations on 10x 3' data (130k)

PCED1B DDIAS NUCB2 PLCG1 ACTN1 HERC2 MCF2L

5.59e-081619575fba13f0aa5002f7eefe219e2c6a07e163f1a50d
ToppCelldroplet-Marrow-nan-3m-Myeloid|Marrow / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation

CCDC88A ATRX VPS13C GCC2 SMCHD1 DOCK10 ERBIN

1.44e-071859577adfa929930cfa795cbfbd9f1a0b439e08aa765d
ToppCell(11)_FOXN4+-(2)_GFP_FOXI1|(11)_FOXN4+ / shred by cell type by condition

VPS13D CCDC88A ATRX VPS13C GCC2 DYNC2I1 IWS1

2.29e-0719895776d40b8c2f8399725b3a62ee2ae0896559cf91eb
ToppCellLeuk-UTI-Lymphocyte-T_NK-CD8_Naive|Leuk-UTI / Disease, Lineage and Cell Type

PCED1B GCC2 NUCB2 HNRNPA1L2 ACTN1 HNRNPA1

2.60e-061829563500a826d86beb98980e2b24e074b02e8e2f957e
ToppCell10x5'-GI_small-bowel-Lymphocytic_T_CD4-T_CD4/CD8|GI_small-bowel / Manually curated celltypes from each tissue

USP34 IGF2R VPS13C SMCHD1 ARHGAP26 DOCK10

3.14e-06188956ab9b725d6e0cdab8e9ddda6dee09e14730e9a578
ToppCellrenal_medulla_nuclei-Adult_normal_reference|renal_medulla_nuclei / Celltypes from Cells and Nuclei per compartment and clinical group

USP53 ANK2 PLPP1 PDE4DIP AUTS2 DYNC2I1

3.33e-06190956f1363f7806cfc4f14fbc1b0e8dac2de813a88eee
ToppCellControl-CD8+_T_naive|Control / Disease condition and Cell class

PCED1B NUCB2 NBEA PLCG1 ACTN1 MCF2L

3.65e-06193956627d345baf1940218c61907305705298e473dbab
ToppCellAdult-Immune-alveolar_macrophage_(MARCO_positive)|Adult / Lineage, Cell type, age group and donor

PCED1B CCDC88A PDE4DIP FTH1 DOCK10 ACTN1

3.87e-0619595655e25f702af19146a161861cfd15f40bbda1dc35
ToppCellcontrol-Others-Megakaryocytes|Others / Cohort 2 (Rhapsody WB + PBMC) with disease condition, lineage and cell classs

IGF2R MYL9 SMCHD1 ARHGAP26 FTH1 ACTN1

3.99e-0619695610d914f1612622f64ac71da04e1995a854a4bec9
ToppCellhealthy_donor-Lymphocytic-T_cell-CD4+_Naive_T_cell|healthy_donor / Disease condition, Lineage, Cell class and subclass

PCED1B USP53 GCC2 NUCB2 PLCG1 ACTN1

4.11e-06197956cf72160f03105876641fa6fdc7405e339eb084c7
ToppCellsevere-Others-Megakaryocytes|Others / Cohort 2 (Rhapsody WB + PBMC) with disease condition, lineage and cell classs

IGF2R MYL9 SMCHD1 ARHGAP26 FTH1 ACTN1

4.11e-06197956fc0864e2de2d9f99084586b467551b6da535d933
ToppCellNeuron-Postmitotic-Excitatory_Neuron_-Newborn-35|World / Primary Cells by Cluster

ZNF462 CCDC88A ANK2 ATRX PDE4DIP SEC63

4.23e-06198956de5214a85fe017eb23d4aa8af624464f062ec57e
ToppCellsystemic_lupus_erythematosus-treated-Lymphocytic_T-T8_naive|systemic_lupus_erythematosus / PBMC cell types (v2) per disease, treatment status, and sex

PCED1B GCC2 NUCB2 HNRNPA1L2 ACTN1 HNRNPA1

4.35e-0619995640eb207fa0f07e2e4d0be69530b8f61f7ea49c73
ToppCell(00)_Basal-(2)_GFP_FOXI1|(00)_Basal / shred by cell type by condition

CCDC88A MYL9 ATRX GCC2 ACTN1 IWS1

4.35e-0619995619674e1eaeb51e4196d847cb62aa437c852951d3
ToppCell(02)_MMP9/10+-(2)_GFP_FOXI1|(02)_MMP9/10+ / shred by cell type by condition

CCDC88A MYL9 ATRX VPS13C GCC2 SEC63

4.35e-0619995618a7f9ced4364f45b184bd529f32ef02c27779d3
ToppCellSepsis-Leuk-UTI-Lymphocyte-T/NK-CD8+_T_naive|Leuk-UTI / Disease, condition lineage and cell class

PCED1B GCC2 NUCB2 HNRNPA1L2 ACTN1 HNRNPA1

4.35e-06199956476daaa0b764f82a0dfb85cc94e5b07a091703bd
ToppCellsystemic_lupus_erythematosus-treated-Lymphocytic_T-T8_naive-female|systemic_lupus_erythematosus / PBMC cell types (v2) per disease, treatment status, and sex

PCED1B GCC2 NUCB2 HNRNPA1L2 ACTN1 HNRNPA1

4.35e-061999566ed413872301707dc73ae66365bee94cd38a292c
ToppCellControl-Control-Lymphocyte-T/NK-CD8+_T_naive|Control / Disease, condition lineage and cell class

PCED1B USP53 GCC2 NUCB2 PLCG1 ACTN1

4.48e-06200956906de95adc9716982ab32f216dddeb52639bad06
ToppCellControl-PLT_3|Control / Disease Group and Platelet Clusters

MYL9 FTH1 PPP6R1 ACTN1 ADI1

1.26e-0514095582ea671f61d55f6896d903c5876b042e2f3385d6
ToppCellChildren_(3_yrs)-Mesenchymal-vascular_smooth_muscle_cell-D139|Children_(3_yrs) / Lineage, Cell type, age group and donor

MYL9 CACNA1H ACTN2 DNAJC6 NOTCH3

2.77e-051659558a82e20c9b1156bb4bbc16f7785abb04458d671b
ToppCellPBMC_fresh-frozen-Mild-Moderate_progression_d02_child-Lymphocytic-Lymphocytic_T-mature_alpha-beta_T_cell-T_CD4_c03-ITGA4|Mild-Moderate_progression_d02_child / Compartment, severity and other cell annotations on 10x 3' data (130k)

SGSM2 PPP6R1 MCF2L PCDHGA8 NOTCH3

3.02e-05168955ca94b29c1030484143a77f2df06dad74d2c6136e
ToppCellPND07-Immune-Immune_Myeloid-Monocytic-Macrophage-AM-AM_G2M|PND07 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif

DDIAS CCDC88A DOCK10 DIAPH3 KNL1

3.29e-05171955845f312f8cbe29d820da25f0e6d75deb382bbfd8
ToppCellLV-13._Vascular_Smooth_Muscle|LV / Chamber and Cluster_Paper

PCED1B MYL9 DOCK10 ACTN1 NOTCH3

3.29e-05171955e99ecae66530d1ae09330cee408c8f3950b87e67
ToppCellChildren_(3_yrs)-Mesenchymal-vascular_smooth_muscle_cell|Children_(3_yrs) / Lineage, Cell type, age group and donor

MYL9 CACNA1H ACTN2 DNAJC6 NOTCH3

3.47e-051739555416b092321c7d9b63f0418c60f2402a138355bf
ToppCellE18.5-Mesenchymal-Mesenchymal_myocytic-Myofibroblast_vascular-VSMC-VSMC_G2M|E18.5 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif

MYL9 DNAJB7 DIAPH3 NOTCH3 KNL1

3.57e-0517495541eb0a214a8b4015a26311f77061c8147144f0e7
ToppCellfacs-Heart-RV-18m-Mesenchymal-smooth_muscle_cell|Heart / Tongue_Heart_Limb_Muscle_Aorta_Diaphragm - method, tissue, subtissue, age, lineage, cell ontology and free annotation

MYL9 DNAI4 ACTN1 RIMS2 NOTCH3

3.67e-05175955d8e385320f554d974538b7cdc4f8e4767f1455f2
ToppCellfacs-Heart-RV-18m-Mesenchymal-smooth_muscle_cell|Heart / Tongue_Heart_Limb_Muscle_Aorta_Diaphragm - method, tissue, subtissue, age, lineage, cell ontology and free annotation

MYL9 DNAI4 ACTN1 RIMS2 NOTCH3

3.67e-05175955cf15465855602ba135752c18755e3e058dbd42ec
ToppCell3'-Parenchyma_lung-Immune_Lymphocytic-Lymphocytic_T/NK-CD8-positive,_alpha-beta_T_cell-CD8_T_cells-CD8_T_cells_L.1.1.0.4|3' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5

SMCHD1 HNRNPA1L2 RIMS2 HNRNPA1 KLRC3

3.77e-05176955ce85a13e10cf37f5cf38ca8b0bac6701b6d00ffd
ToppCellPND07-Mesenchymal-Mesenchymal_myocytic-Myofibroblast_vascular-Pericyte-Pericyte_G2M|PND07 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif

IGF2R DIAPH3 NOTCH3 KNL1 SEZ6

3.87e-051779552b63f0529ef73e0eede9b7ef1f08b0a0426a9c82
ToppCellfacs-Heart-LA-24m-Mesenchymal-smooth_muscle_cell|Heart / Tongue_Heart_Limb_Muscle_Aorta_Diaphragm - method, tissue, subtissue, age, lineage, cell ontology and free annotation

MGAT3 MYL9 CACNA1H ACTN1 NOTCH3

3.87e-0517795532fecefba1a55e1f418c9a055236fa11175c692d
ToppCellfacs-Heart-LA-24m-Mesenchymal-smooth_muscle_cell|Heart / Tongue_Heart_Limb_Muscle_Aorta_Diaphragm - method, tissue, subtissue, age, lineage, cell ontology and free annotation

MGAT3 MYL9 CACNA1H ACTN1 NOTCH3

3.87e-051779551b153fbfe1323dc589de4af73a52149ea5ce6763
ToppCelldroplet-Limb_Muscle-MUSCLE-30m|Limb_Muscle / Tongue_Heart_Limb_Muscle_Aorta_Diaphragm - method, tissue, subtissue, age, lineage, cell ontology and free annotation

ATRX VPS13C SMCHD1 N4BP1 TAF7

3.98e-0517895501dafd19de04eff459253eaa9a35debf8f3deedf
ToppCelldroplet-Marrow-nan-3m-Lymphocytic|Marrow / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation

PDIA4 CCDC88A PPFIA4 NUCB2 DOCK10

4.09e-05179955dcaf2191134a586d50ebaf67dcf5b815b54a722b
ToppCelldroplet-Marrow-nan-3m-Lymphocytic-nan|Marrow / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation

PDIA4 CCDC88A PPFIA4 NUCB2 DOCK10

4.09e-0517995587a69f9f83b8f0c028a4874acb238f2e079bf51f
ToppCellE18.5-samps-Mesenchymal-Pericyte|E18.5-samps / Age Group, Lineage, Cell class and subclass

EPHX1 MYL9 NCKAP1 PPP6R1 NOTCH3

4.20e-051809550b1d370db64862fe1c7ea0ffaf06d03ec82e6e70
ToppCellfacs-Marrow-T-cells-3m-Myeloid|Marrow / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation

CCDC88A VPS13C PPFIA4 NUCB2 DOCK10

4.31e-051819557286700396676fdc41d9723979b8b408177aceb9
ToppCellfacs-Spleen-nan-3m-Lymphocytic-Cd3e_T_cell|Spleen / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation

PCED1B IGF2R PLCG1 ACTN1 ACTN2

4.31e-05181955be7c7db6b99603759593e6f79cdcaa4bbf234cb7
ToppCellrenal_papilla_nuclei-Adult_normal_reference-Epithelial-Intermediate_tubule_epithelial_cell-kidney_loop_of_Henle_thin_descending_limb_epithelial_cell-Descending_Thin_Limb_Cell_Type_3|Adult_normal_reference / Celltypes from Cells and Nuclei per compartment and clinical group

ANK2 DIAPH3 MCF2L RIMS2 CACNA2D3

4.42e-05182955eb138aa1dca9373f1586600f258df06dcf56d81f
ToppCelldroplet-Marrow-nan-3m-Myeloid-promonocyte|Marrow / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation

CCDC88A VPS13C SMCHD1 DOCK10 YTHDC2

4.42e-05182955bc8d621be57f76d718d9b0f11e023b0f4dcb668d
ToppCellSmart-start-Cell-Wel_seq-Neoplastic-Stem-like-NPC-like-NPC-like_OPC-B|Smart-start-Cell-Wel_seq / Platform, Oncotype, Lineage, Cell_class, celltype (level4), mutation group

DNAJB7 MSH5 PCDHGA8 KLRC3 GOLGA6L7

4.42e-05182955f7b28744d9c330b6004763aa8aa8605ba41fd1fa
ToppCell3'-Child04-06-SmallIntestine-Hematopoietic-Plasma_cells|Child04-06 / Celltypes from developing, pediatric, Crohn's, & adult GI tract

PDIA4 CCDC88A NUCB2 WNT10A PRDM15

4.91e-05186955b9fb7210f615faff0633a1c82dd3be38cb72a00b
ToppCellCV-Moderate-7|CV / Virus stimulation, Condition and Cluster

CLASP1 VPS13C SMCHD1 DOCK10 SEC63

4.91e-051869558571956890fc9894d766ba294a28e376b4aba428
ToppCellCOVID-19-Fibroblasts-Airway_smooth_muscle|COVID-19 / group, cell type (main and fine annotations)

USP53 MYL9 CACNA1H ACTN1 NOTCH3

5.03e-05187955464a0c3b92b778911b5f9cd73642e09e3472063a
ToppCellfacs-Brain_Non-Myeloid-Cerebellum-3m-Neuronal|Brain_Non-Myeloid / Brain_Non-Myeloid_Brain_Myeloid - method, tissue, subtissue, age, lineage, cell ontology and free annotation

NEFM PPFIA4 WNT10A RIMS2 UNC79

5.03e-051879557b2cd0c618ed081223343f3bec2244c8723c9a31
ToppCellrenal_papilla_nuclei-Adult_normal_reference-Epithelial-Intermediate_tubule_epithelial_cell|Adult_normal_reference / Celltypes from Cells and Nuclei per compartment and clinical group

ANK2 DIAPH3 MCF2L RIMS2 CACNA2D3

5.03e-05187955c41a2c81dd2ceef303f39f699032aa7d6ea67cf0
ToppCellLA-03._Atrial_Cardiomyocyte|World / Chamber and Cluster_Paper

MYL9 ANK2 PDE4DIP ACTN1 ACTN2

5.16e-051889556d249fe92d51a19da19ec14bb2262d394255d577
ToppCellcontrol-Myeloid-Neutrophils_4|control / Cohort 2 (Rhapsody WB + PBMC) with disease condition, lineage and cell classs

IGF2R SMCHD1 ARHGAP26 FTH1 ACTN1

5.16e-0518895522d76c222fb0e3da08e10191af0090f14e03f2ad
ToppCellLA-13._Vascular_Smooth_Muscle|LA / Chamber and Cluster_Paper

PCED1B PLPP1 DOCK10 ACTN1 NOTCH3

5.16e-0518895534e1b074a3995aa46ab194eb45115d76d1a5514d
ToppCellPBMC_fresh-frozen-Severe-critical_progression_d12-22_no-steroids-Lymphocytic-Lymphocytic_T-mature_alpha-beta_T_cell-T_CD8_c01-LEF1|Severe-critical_progression_d12-22_no-steroids / Compartment, severity and other cell annotations on 10x 3' data (130k)

PCED1B NUCB2 DOCK10 PLCG1 ACTN1

5.29e-05189955e9df7ecd36bee1fedce23bb188c68a94fa60462c
ToppCellrenal_papilla_nuclei-Adult_normal_reference-Epithelial-Intermediate_tubule_epithelial_cell-kidney_loop_of_Henle_thin_ascending_limb_epithelial_cell|Adult_normal_reference / Celltypes from Cells and Nuclei per compartment and clinical group

ANK2 DIAPH3 MCF2L RIMS2 CACNA2D3

5.43e-051909551cf023e3c6924d6a06f353d4b62444b6f2fee8a7
ToppCellrenal_papilla_nuclei-Adult_normal_reference-Epithelial-Intermediate_tubule_epithelial_cell-kidney_loop_of_Henle_thin_ascending_limb_epithelial_cell-Ascending_Thin_Limb_Cell|Adult_normal_reference / Celltypes from Cells and Nuclei per compartment and clinical group

ANK2 DIAPH3 MCF2L RIMS2 CACNA2D3

5.43e-0519095559bbbd2c8d4b7ce46c54ca8022b1557e7e5eee2a
ToppCellrenal_papilla_nuclei-Adult_normal_reference|renal_papilla_nuclei / Celltypes from Cells and Nuclei per compartment and clinical group

ANK2 PLPP1 PDE4DIP DOCK10 AUTS2

5.70e-051929556c106b91e46eabbe686a52a65a9c94ad9cbe9390
ToppCellPBMC-Mild-Lymphocyte-T/NK-CD8+_T-CD8+_T_naive-|Mild / Location, Disease Group, Cell group, Cell class and sub_cluster (2021.03.09)

PCED1B GCC2 NUCB2 PLCG1 ACTN1

5.70e-05192955ad2e0f35d50fe4e6977eba8a7a2bd990f6946305
ToppCellPBMC-Mild-Lymphocyte-T/NK-CD8+_T-CD8+_T_naive|Mild / Location, Disease Group, Cell group, Cell class (2021.03.09)

PCED1B GCC2 NUCB2 PLCG1 ACTN1

5.70e-05192955284955fec5103194d416320f41fa4d87c7efc4fb
ToppCellPBMC-Mild-Lymphocyte-T/NK-CD8+_T-CD8+_T_naive|Mild / Location, Disease Group, Cell group, Cell class and sub_cluster (2021.03.01)

PCED1B GCC2 NUCB2 PLCG1 ACTN1

5.70e-051929550d3b2b9cd586a4adbc3755563dd50b140227c287
ToppCellPBMC-Mild-Lymphocyte-T/NK-CD8+_T-CD8+_T_naive-|Mild / Location, Disease Group, Cell group, Cell class and sub_cluster (2021.03.01)

PCED1B GCC2 NUCB2 PLCG1 ACTN1

5.70e-0519295567f50e5b1d449923002dc5b5d0c4d32c523034d3
ToppCellfacs-Brain_Non-Myeloid-Striatum|Brain_Non-Myeloid / Brain_Non-Myeloid_Brain_Myeloid - method, tissue, subtissue, age, lineage, cell ontology and free annotation

NISCH ACTN2 CPOX CACNA2D3 SEZ6

5.84e-05193955d8ccfb780a75bdf9141f41fb29a076958601ebb4
ToppCell368C-Fibroblasts-Fibroblast-K_(Pericytes)|Fibroblasts / Donor, Lineage, Cell class and subclass (all cells)

MYL9 CACNA1H ACTN1 MCF2L NOTCH3

5.84e-051939555260ac95a15cc43a19909badad0c7e3854da920d
ToppCellTCGA-Prostate-Primary_Tumor-Prostate_Adenocarcinoma-Acinar_Adenocarcinoma-6|TCGA-Prostate / Sample_Type by Project: Shred V9

USP34 IGF2R ATRX CTR9 GCC2

5.84e-05193955abd71b2cf667ef2b1c4d88acd0c1dd19a12ff659
ToppCell3'-GW_trimst-1.5-SmallIntestine-Neuronal-neurons_A|GW_trimst-1.5 / Celltypes from developing, pediatric, Crohn's, & adult GI tract

ANK2 CLASP1 ARHGAP26 NBEA DNAJC6

5.84e-05193955a189d46c39067b717509cd144e0225cc93d7731d
ToppCellPBMC-Control-Lymphocyte-T/NK-CD8+_T-CD8+_T_naive|Control / Location, Disease Group, Cell group, Cell class and sub_cluster (2021.03.01)

PCED1B USP53 NUCB2 PLCG1 ACTN1

5.84e-05193955d371403b51281a6e37652fa8dc1b2dd81d2ab371
ToppCellPBMC-Control-Lymphocyte-T/NK-CD8+_T-CD8+_T_naive-|Control / Location, Disease Group, Cell group, Cell class and sub_cluster (2021.03.01)

PCED1B USP53 NUCB2 PLCG1 ACTN1

5.84e-051939556436d3bfce02d137b76e5c4c8b2fe27974c57c99
ToppCellPBMC-Severe-Myeloid-Neutrophil-immature_Neutrophil-Neu_4|Severe / Location, Disease Group, Cell group, Cell class and sub_cluster (2021.03.01)

NUCB2 ACTN1 DIAPH3 RAB44 KNL1

5.84e-05193955ccab6a0c76f574ef7e1d6d5f1e620376daf21bbf
ToppCell368C-Fibroblasts-Fibroblast-K_(Pericytes)-|Fibroblasts / Donor, Lineage, Cell class and subclass (all cells)

MYL9 CACNA1H ACTN1 MCF2L NOTCH3

5.84e-051939555ec917931b438dd0e7fb03eb6af459d3ef6b84ba
ToppCellPBMC-Control-Lymphocyte-T/NK-CD8+_T-CD8+_T_naive-|Control / Location, Disease Group, Cell group, Cell class and sub_cluster (2021.03.09)

PCED1B USP53 NUCB2 PLCG1 ACTN1

5.84e-051939553cde93bbfc1ae6fb586ae6b7aaa6ed8b5eee28a4
ToppCellPBMC-Control-Lymphocyte-T/NK-CD8+_T-CD8+_T_naive|Control / Location, Disease Group, Cell group, Cell class (2021.03.09)

PCED1B USP53 NUCB2 PLCG1 ACTN1

5.84e-05193955d755dc6de4fbd4d8f5d8a88aac497e7b9e8b89de
ToppCellfacs-Brain_Non-Myeloid-Striatum-3m|Brain_Non-Myeloid / Brain_Non-Myeloid_Brain_Myeloid - method, tissue, subtissue, age, lineage, cell ontology and free annotation

ANK2 ACTN2 CPOX ITFG1 SEZ6

5.99e-05194955ba529c051f248d29f4222f4bc9801ba233859093
ToppCellmetastatic_Brain-B_lymphocytes-Plasma_cells|B_lymphocytes / Location, Cell class and cell subclass

MRPS31 PDIA4 SFTPA2 NUCB2 SFTPA1

5.99e-0519495569828d24b3e182f26aa15eb0ae5aa21c640c2922
ToppCelldroplet-Marrow-nan-3m-Myeloid-granulocytopoietic_cell|Marrow / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation

ATRX ADAMTS7 MSH5 SEC63 KNL1

5.99e-051949558ef0b71fef5b84cfd04973f891215333e7035d1d
ToppCellRA-03._Atrial_Cardiomyocyte|World / Chamber and Cluster_Paper

MYL9 ANK2 BMP10 PDE4DIP ACTN2

5.99e-0519495589812fb164065041357bb37a3c2d87028ec3de4e
ToppCelldroplet-Limb_Muscle-nan-18m-Mesenchymal-unknown|Limb_Muscle / Tongue_Heart_Limb_Muscle_Aorta_Diaphragm - method, tissue, subtissue, age, lineage, cell ontology and free annotation

MGAT3 MYL9 WNT10A RIMS2 NOTCH3

5.99e-0519495552ecec2618c3bb5fdd7fb06b5a40bd6f0aedfe1d
ToppCellmild-Myeloid-Neutrophils_1|mild / Cohort 2 (Rhapsody WB + PBMC) with disease condition, lineage and cell classs

IGF2R SMCHD1 ARHGAP26 FTH1 ACTN1

5.99e-05194955ccd911ce3251cd1c60f1fb2ce00650fbe7a379bb
ToppCellPBMC-Severe-Myeloid-Neutrophil-immature_Neutrophil-Neu_4|Severe / Location, Disease Group, Cell group, Cell class and sub_cluster (2021.03.09)

NUCB2 ACTN1 DIAPH3 RAB44 KNL1

5.99e-0519495523318a1b55895b5166c6151f488a94a09b4627ff
ToppCell3'-Airway_Nasal-Epithelial-Airway_ciliated-ciliated_columnar_cell_of_tracheobronchial_tree|3' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5

MRPS31 NUCB2 DYNC2I1 DNAI4 NBEA

6.14e-05195955649fd2336e963f6a150d182a53ad5dd838ca80b1
ToppCell3'-Airway_Nasal-Epithelial-Airway_ciliated-ciliated_columnar_cell_of_tracheobronchial_tree-Multiciliated_(non-nasal)|3' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5

MRPS31 NUCB2 DYNC2I1 DNAI4 NBEA

6.14e-05195955129ad5f4253ecb1a8477cc38773e6e91ea9570b0
ToppCell3'-Airway_Nasal-Epithelial-Airway_ciliated-ciliated_columnar_cell_of_tracheobronchial_tree-Multiciliated_(non-nasal)-Multiciliated_(non-nasal)_L.0.3.0.0|3' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5

MRPS31 NUCB2 DYNC2I1 DNAI4 NBEA

6.14e-051959553e70ee987d66d450062d5df3d7c733ccc7344470
ToppCellcontrol-Myeloid-Neutrophils_1|control / Cohort 2 (Rhapsody WB + PBMC) with disease condition, lineage and cell classs

IGF2R SMCHD1 ARHGAP26 FTH1 ACTN1

6.29e-051969559c8623232c47af5de9f360fd5c5113362e37c6c9
ToppCellNeuron-Postmitotic-Excitatory_Neuron_-IPC/newborn-38|World / Primary Cells by Cluster

ZNF462 ATRX AUTS2 HNRNPA1 SEZ6

6.29e-0519695538da0751941adca650fe9b383d9f343153978eb5
ToppCellNeuron-Postmitotic-Excitatory_Neuron_-IPC/newborn|World / Primary Cells by Cluster

ZNF462 ATRX AUTS2 HNRNPA1 SEZ6

6.29e-05196955721650a08d260faf530dbd52d4e9275d27f3bac2
ToppCell3'-Parenchyma_lung-Mesenchymal-Mesenchymal_Myocytic-tracheobronchial_smooth_muscle_cell-SM_activated_stress_response-SM_activated_stress_response_L.2.3.0.1|3' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5

MYL9 CACNA1H ACTN1 ACTN2 NOTCH3

6.29e-05196955ac4c8571bd792538f8df7b9bdd90ef58405fd3b1
ToppCell3'-Parenchyma_lung-Mesenchymal-Mesenchymal_Myocytic-tracheobronchial_smooth_muscle_cell-SM_activated_stress_response|3' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5

MYL9 CACNA1H ACTN1 ACTN2 NOTCH3

6.29e-0519695570b2e0b4ff4f1bc03fb72ace07a8a44f4b415922
ToppCellChildren_(3_yrs)-Immune|Children_(3_yrs) / Lineage, Cell type, age group and donor

PCED1B CCDC88A ARHGAP26 FTH1 DOCK10

6.44e-05197955f18807124b91310fcd84238484a80ecdba684679
ToppCell356C-Fibroblasts-Fibroblast-K_(Pericytes)|Fibroblasts / Donor, Lineage, Cell class and subclass (all cells)

MYL9 CACNA1H ACTN1 ACTN2 NOTCH3

6.44e-0519795571367bebc23d0e81f60f780d6b0ab3a1783ac014
ToppCellH1299-infected-SARSCoV2|infected / Cell line, Condition and Strain

CCDC88A ATRX NISCH DYNC2I1 RIMS2

6.44e-051979550fa3e4cf93e77d78b1f97b906c5b13ca741ae17e
ToppCell356C-Fibroblasts-Fibroblast-K_(Pericytes)-|Fibroblasts / Donor, Lineage, Cell class and subclass (all cells)

MYL9 CACNA1H ACTN1 ACTN2 NOTCH3

6.44e-051979550f9836554ace3f9d155ebafdd719aa26466ca44e
ToppCellTCGA-Skin-Metastatic-Melanoma|TCGA-Skin / Sample_Type by Project: Shred V9

USP34 ATRX VPS13C GCC2 L3MBTL3

6.60e-05198955af4fb9eb2295c7b90624b38ba25619aa15254efa
ToppCellsystemic_lupus_erythematosus-flare|systemic_lupus_erythematosus / PBMC cell types (v2) per disease, treatment status, and sex

ATRX VPS13C GCC2 SMCHD1 HNRNPA1

6.60e-051989554c93ee921d56132d80832d8e94563f32ccf13bbc
ToppCellBronchial-NucSeq-Stromal-Myofibroblastic-Muscle_smooth_systemic_arterial|NucSeq / Cell types per location group and 10X technology with lineage, and cell group designations

MYL9 CACNA1H ACTN1 ACTN2 NOTCH3

6.60e-05198955f261a37dd07976548b897af86df1d1a0dc069889
ToppCellImmune|World / Lineage, Cell type, age group and donor

PCED1B CCDC88A ARHGAP26 FTH1 DOCK10

6.60e-0519895565681b54d13c6997bd90a1c2a12314a80e964fe3
ToppCellnormal-na-Lymphocytic_T-T8_naive|normal / PBMC cell types (v2) per disease, treatment status, and sex

PCED1B GCC2 NUCB2 ACTN1 HNRNPA1

6.60e-0519895561b7e313967acff0a7cfc0a797f78494d3d08e29
ToppCellPrimary_Visual_cortex_(V1C)-Neuronal|Primary_Visual_cortex_(V1C) / Sample groups (6 Anatomical region groups), with 5 level hierarchy of cell types

ARHGAP26 NBEA RIMS2 UNC79 CACNA2D3

6.60e-051989558ab40fae14fe02e39bc8c8da187a5cd60c787643
ToppCellTCGA-Skin-Metastatic|TCGA-Skin / Sample_Type by Project: Shred V9

USP34 ATRX VPS13C GCC2 L3MBTL3

6.60e-05198955ad39cce004867f083f8da1954e0cf5a263815184
ToppCellnormal-na-Lymphocytic_T-T8_naive-female|normal / PBMC cell types (v2) per disease, treatment status, and sex

PCED1B GCC2 NUCB2 ACTN1 HNRNPA1

6.60e-05198955ac8e21629991e47796e2c0a201a6d3bd8cd30b85
ToppCellTCGA-Skin-Metastatic-Melanoma-Skin_Cutaneous_Melanoma|TCGA-Skin / Sample_Type by Project: Shred V9

USP34 ATRX VPS13C GCC2 L3MBTL3

6.60e-0519895562cbf4b29e8af4983fb47a17f96da62682a5137e
ToppCellBrain_organoid-organoid_Velasco_nature-3_mon-Neuronal-CPNs|3_mon / Sample Type, Dataset, Time_group, and Cell type.

NEFM ANK2 NBEA AASDHPPT ACTN2

6.60e-0519895560d8d3bbd754ffde41c50013d822667b185a9751
ToppCell5'-GW_trimst-1.5-SmallIntestine-Neuronal-neurons_A|GW_trimst-1.5 / Celltypes from developing, pediatric, Crohn's, & adult GI tract

NEFM ANK2 ARHGAP26 NBEA DNAJC6

6.75e-05199955b4824d3683a4e3025b8e74a0f1755b331b2a0ba7
ToppCellsystemic_lupus_erythematosus-flare-Lymphocytic_T-T8_naive-female|systemic_lupus_erythematosus / PBMC cell types (v2) per disease, treatment status, and sex

PCED1B GCC2 NUCB2 ACTN1 HNRNPA1

6.75e-0519995567b9ff07de5be0895612c201cb21e66a3f88669a
DrugEthopropazine hydrochloride [1094-08-2]; Up 200; 11.4uM; PC3; HT_HG-U133A

PDIA4 PPFIA4 PDE4DIP DNAI4 YTHDC2 TADA2A ACTN1 RIMS2

1.22e-061909486697_UP
Drugsplitomicin; Up 200; 20uM; PC3; HG-U133A

ZNF16 VPS13D SMCHD1 NBEA N4BP1 CPOX MCF2L EXOC7

1.43e-06194948661_UP
DrugDimethisoquin hydrochloride [2773-92-4]; Down 200; 13uM; MCF7; HT_HG-U133A

USP34 SMCHD1 PDE4DIP DYNC2I1 YTHDC2 PLCG1 MCF2L EXOC7

1.73e-061999482807_DN
DrugAcemetacin [53164-05-9]; Up 200; 9.6uM; MCF7; HT_HG-U133A

USP34 BMP10 YTHDC2 CACNA1H EXOC7 RIMS2 DNAJC6

1.60e-051949477442_UP
DrugBambuterol hydrochloride [81732-46-9]; Down 200; 10uM; HL60; HG-U133A

PDIA4 CCDC88A SMCHD1 AASDHPPT ACTN2 CPOX ARFIP1

1.66e-051959471582_DN
Drugclozapine; Down 200; 10uM; MCF7; HT_HG-U133A

VPS13D CLASP1 CEP131 N4BP1 RBM48 EXOC7 HNRNPA1

1.71e-051969476988_DN
DrugIoxaglic acid [59017-64-0]; Down 200; 3.2uM; MCF7; HT_HG-U133A

ZNF16 PDE4DIP CEP131 TADA2A EXOC7 DNAJC6 HNRNPA1

1.77e-051979473528_DN
Drugrapamycin; Up 200; 0.1uM; MCF7; HG-U133A

ZNF16 VPS13D CLASP1 BMP10 ACTN1 CPOX RBM48

1.89e-05199947326_UP
DrugBenoxinate hydrochloride [5987-82-6]; Up 200; 11.6uM; MCF7; HT_HG-U133A

ARHGAP26 DOCK10 CACNA1H PLCG1 ACTN2 EXOC7 NOTCH3

1.89e-051999474115_UP
Diseasemean platelet volume

PCYT1A PCDHGA12 CTR9 GCC2 NUCB2 DOCK10 DYNC2I1 ACTN1 TAF7 MCF2L ARFIP1 HNRNPA1 PCDHGA8

1.87e-0510209313EFO_0004584
Diseaseautosomal recessive spinocerebellar ataxia 4 (implicated_via_orthology)

VPS13D VPS13C

2.94e-053932DOID:0111611 (implicated_via_orthology)
Diseaselevel of leukocyte immunoglobulin-like receptor subfamily B member 4 in blood serum

SFTPA2 SFTPA1

9.77e-055932OBA_2042200
Diseasefocal segmental glomerulosclerosis 1 (implicated_via_orthology)

ACTN1 ACTN2

9.77e-055932DOID:0111128 (implicated_via_orthology)
Diseaselevel of prosaposin in blood serum

SFTPA2 SFTPA1

9.77e-055932OBA_2044552
Diseasenewborn respiratory distress syndrome (biomarker_via_orthology)

SFTPA2 SFTPA1

1.46e-046932DOID:12716 (biomarker_via_orthology)
Diseasenewborn respiratory distress syndrome (is_implicated_in)

SFTPA2 SFTPA1

2.04e-047932DOID:12716 (is_implicated_in)
DiseaseMastocytosis

PDE4DIP CACNA1H MSH5

2.55e-0439933EFO_0009001
Diseaseleukocyte immunoglobulin-like receptor subfamily B member 4 measurement

SFTPA2 SFTPA1

2.72e-048932EFO_0801768
Diseasemyopathy (implicated_via_orthology)

HNRNPA1L2 HNRNPA1 HNRNPA1L3

4.73e-0448933DOID:423 (implicated_via_orthology)
Diseasecomplement C1q tumor necrosis factor-related protein 1 measurement

SFTPA2 SFTPA1

6.35e-0412932EFO_0801493
DiseaseIgG galactosylation measurement

MGAT3 CEP131

6.35e-0412932EFO_0008425
Diseasegranulins measurement

SFTPA2 SFTPA1

6.35e-0412932EFO_0008141
DiseaseHamman-Rich syndrome

SFTPA2 SFTPA1

8.72e-0414932C0085786
Diseasebacterial pneumonia (biomarker_via_orthology)

SFTPA2 SFTPA1

8.72e-0414932DOID:874 (biomarker_via_orthology)
Diseasecoronary artery disease

IGF2R SFTPA2 ADAMTS7 PPFIA1 ARHGAP26 WBP1L RASSF10 SFTPA1 PLCG1 SEC63 MCF2L

1.33e-0311949311EFO_0001645
DiseaseFEV/FEC ratio

USP34 SFTPA2 MYL9 VPS13C ARHGAP26 RASSF10 SFTPA1 TAF7 ARFIP1 L3MBTL3 CACNA2D3

1.67e-0312289311EFO_0004713
Diseaseurinary microalbumin measurement

RASSF10 YTHDC2

1.80e-0320932EFO_0010967
DiseaseFamilial Idiopathic Pulmonary Fibrosis

SFTPA2 SFTPA1

1.80e-0320932C4721952
Diseasecognitive function measurement

USP34 MGAT3 CLASP1 AUTS2 DNAI4 YTHDC2 NBEA CACNA1H MSH5 DIAPH3 HNRNPA1L3 CACNA2D3

1.81e-0314349312EFO_0008354
DiseaseIdiopathic Pulmonary Fibrosis

SFTPA2 SFTPA1

1.98e-0321932C1800706
Diseasecardioembolic stroke

USP34 PPFIA4 DOCK10 HNRNPA1L3

2.08e-03170934EFO_1001976
Diseasecongenital diaphragmatic hernia (biomarker_via_orthology)

SFTPA2 SFTPA1

2.59e-0324932DOID:3827 (biomarker_via_orthology)
Diseasewhite matter hyperintensity measurement

ZNF16 CCDC88A ANK2 PRDM15 HNRNPA1L3

2.71e-03302935EFO_0005665
Diseasebrain cancer (implicated_via_orthology)

L3MBTL3 NOTCH3

3.04e-0326932DOID:1319 (implicated_via_orthology)

Protein segments in the cluster

PeptideGeneStartEntry
KHIVNHDDVFEESEE

ERBIN

586

Q96RT1
EESKIDEHHFVAVAL

AASDHPPT

231

Q9NRN7
KHEAFESDLAAHQDR

ACTN1

436

P12814
LRKHEAFESDLAAHQ

ACTN2

441

P35609
VDDSREHSFNRDLKH

ARFIP1

21

P53367
VFDEHKEEDLFELSH

DIAPH3

391

Q9NSV4
LLEDEEEDLKITHHA

ADAMTS7

296

Q9UKP4
LHELDREIDHYEAKV

RASSF10

246

A6NK89
GIKEDTEEHHLRDYF

HNRNPA1L2

111

Q32P51
GIKEDTEEHHLRDYF

HNRNPA1L3

66

A0A2R8Y4L2
EHKDTEDFRQDFHSE

RBM48

161

Q5RL73
HEEATEEDIHDKFAE

RBM8A

81

Q9Y5S9
EALELTLRKRDSDHH

RAB44

206

Q7Z6P3
DRKKFHSSDSEEEEH

IWS1

356

Q96ST2
LERALDREEEAAHHL

PCDHGA8

196

Q9Y5G5
DREEKAAHHLVLTAS

PCDHGA12

201

O60330
TVADTDDHRVKVHFD

L3MBTL3

496

Q96JM7
EKDSESHLAEDRHAV

ANK2

2736

Q01484
HEFDLLDVRFHELGD

MGAT3

216

Q09327
DVLHESHDIFKREQD

HERC2

3916

O95714
SLFEHHKALDEKVRE

PPFIA4

156

O75335
AVSVLEKEHDYRDEH

DYNC1LI2

236

O43237
HFDDERHQSNVDRKE

DYNC2I1

266

Q8WVS4
HLKRLIDERDEHSET

CCDC88A

196

Q3V6T2
DEEASGFIHEDHLRE

MYL9

111

P24844
EFLAEHRIDFVAHDD

PCYT1A

156

P49585
ATEARKHNFDVLDLH

PCED1B

201

Q96HM7
HVDNDIDKFHADHSR

DDIAS

446

Q8IXT1
LLDHFANREITDHLD

NOTCH3

1991

Q9UM47
DHSESRKDLAADEHK

AUTS2

896

Q8WXX7
SLFEHHKALDEKVRE

PPFIA1

166

Q13136
DSAVAKALEHHRSEI

IMMT

446

Q16891
DREIFDHHTEEDIDK

KNL1

1816

Q8NG31
KFEEDSKDLAARLHH

GOLGA6L7

116

A0A1B0GV03
SFDRLDLLKDHVAIH

PRDM10

596

Q9NQV6
AATSDLEHYDKTRHE

NUCB2

161

P80303
EHDFRVKHLSEALND

EXOC7

331

Q9UPT5
FRDEVFHIHKAAEDL

NCKAP1

296

Q9Y2A7
SHRHSKEYIVDDEDV

RIMS2

331

Q9UQ26
FLHQSHEEREHAEKL

FTH1

56

P02794
HKPDDVFKEIFHERD

DNAJB7

91

Q7Z6W7
YHEHDSLLDHKEEEE

ATRX

2251

P46100
SDEEIHDLHQRIDKF

EPHX1

56

P07099
EVHIESKHDEAEDAS

BMP10

221

O95393
KLPSHSFEIDHEDAD

DOCK10

146

Q96BY6
EAAEEAHLKHEFDAD

CACNA2D3

111

Q8IZS8
HIKDEFFHEREDLEF

GCC2

371

Q8IWJ2
VDDIRSFLDSRHLDH

DNAJC6

91

O75061
ASLDRAKAEAEHDEH

CTR9

476

Q6PD62
HVEHLLRDLASFEEK

MCF2L

386

O15068
AKIHEDEEDHSDAIL

DNAI4

381

Q5VTH9
EDKTSVHFEEDFHKL

CACNA1H

1031

O95180
TQHEAAVKRADHLEE

CEP131

1056

Q9UPN4
EDAVHFHRTLKEACD

CPOX

291

P36551
KLEAEEAIEVDHSHD

PHAX

376

Q9H814
RDIAQEFSDDLHHIA

MSH5

361

O43196
KLVSFHDDSDEDLLH

IGF2R

2476

P11717
SEFHEHIFLEKHLES

MRPS31

326

Q92665
HDSLEHDELREIFND

TAF7

211

Q15545
DDERFLHHLIIEEKE

SMCHD1

301

A6NHR9
EEAERHKEYLEQHSR

TMEM191C

131

A6NGB0
HDKFIESHALEFELR

TADA2A

266

O75478
HFKDIALMDDHQREE

PRDM15

951

P57071
RQRAEDVHKHAEFES

NBEA

1991

Q8NFP9
FKERKEEDSHTTLHE

PLPP1

256

O14494
PHFRETLKSHEAELD

ARHGAP26

16

Q9UNA1
DIIKFFNERAEHHDA

SGSM2

971

O43147
LAFKHEIKDSDHAER

KLRC3

191

Q07444
DRDLEHLSKFIEEHA

PDIA4

621

P13667
AHLDEELQATLHDFR

SFTPA2

101

Q8IWL1
AHLDEELQATLHDFR

SFTPA1

101

Q8IWL2
DRKLAEEEDLFDSAH

SAFB

251

Q15424
HKDSHKEVVRAAEEA

CLASP1

1396

Q7Z460
RHRDLVDEDLSHFQS

USP53

476

Q70EK8
SDFHDLHEKLVAERK

NISCH

51

Q9Y2I1
RISQEHLADHFDSRE

PLCG1

1261

P19174
KESDRHTLLHFLEDE

SEC63

416

Q9UGP8
HLHFEKVSLAEDDDR

SEZ6

456

Q53EL9
SEDIHVKHPADFRDI

VPS13C

2786

Q709C8
RSLKDSLDHFHVNEE

WDR53

81

Q7Z5U6
HLHSSSDDEDDRLKE

PPP6R1

526

Q9UPN7
AEDRELLKAYHHSFD

YTHDC2

586

Q9H6S0
HHSFDDEKVDLDLIM

YTHDC2

596

Q9H6S0
TEDKEFLHKEDIHED

ZNF16

71

P17020
FLHKEDIHEDLESQA

ZNF16

76

P17020
ETKHTEELDSHLRDE

ZNF462

2336

Q96JM2
EELDSHLRDEHKVSR

ZNF462

2341

Q96JM2
HELTTDYDEKALHEL

USP34

1286

Q70CQ2
KDFLDSREPHRDIHA

WNT10A

226

Q9GZT5
DDREKRQEAHRFHFD

ITFG1

596

Q8TB96
GIKEDTEEHHLRDYF

HNRNPA1

111

P09651
HHDDDLKEFNTLIDD

WBP1L

261

Q9NX94
SLLKEAEFHAEQREH

UNC79

451

Q9P2D8
LVHDRFHKQEELAES

VPS13D

391

Q5THJ4
EEHLHLDDEIRYILD

ADI1

86

Q9BV57
ASHDDRFLLHLADKT

N4BP1

701

O75113
AEFHQHLEEKRKAEE

PDE4DIP

1011

Q5VU43
DHLEEDIHRLKERFE

NEFM

176

P07197