Cluster composition

Functions

CategoryNameIntersectionWithQueryPValueGenesInTermGenesInQueryGenesInTermInQueryID
GeneOntologyMolecularFunctionextracellular matrix structural constituent conferring tensile strength

COL4A3 COL4A4 COL17A1 COLQ

4.16e-0746274GO:0030020
GeneOntologyMolecularFunctionaryl hydrocarbon receptor binding

NCOA2 ARNT2

6.30e-059272GO:0017162
GeneOntologyMolecularFunctionextracellular matrix structural constituent

COL4A3 COL4A4 COL17A1 COLQ

1.13e-04188274GO:0005201
GeneOntologyMolecularFunctionproteasome binding

USP13 PSMD14

3.30e-0420272GO:0070628
GeneOntologyBiologicalProcessglomerular basement membrane development

COL4A3 COL4A4

7.38e-0510272GO:0032836
GeneOntologyBiologicalProcessextracellular matrix organization

LRP1 COL4A3 COL4A4 COL17A1 COLQ

1.15e-04377275GO:0030198
GeneOntologyBiologicalProcessextracellular structure organization

LRP1 COL4A3 COL4A4 COL17A1 COLQ

1.17e-04378275GO:0043062
GeneOntologyBiologicalProcessexternal encapsulating structure organization

LRP1 COL4A3 COL4A4 COL17A1 COLQ

1.18e-04379275GO:0045229
GeneOntologyCellularComponentcollagen trimer

COL4A3 COL4A4 COL17A1 COLQ

5.56e-0688284GO:0005581
GeneOntologyCellularComponentbasement membrane

COL4A3 COL4A4 COL17A1 COLQ

2.03e-05122284GO:0005604
GeneOntologyCellularComponentcollagen type IV trimer

COL4A3 COL4A4

2.59e-056282GO:0005587
GeneOntologyCellularComponentbasement membrane collagen trimer

COL4A3 COL4A4

4.82e-058282GO:0098651
GeneOntologyCellularComponentnetwork-forming collagen trimer

COL4A3 COL4A4

4.82e-058282GO:0098642
GeneOntologyCellularComponentcollagen network

COL4A3 COL4A4

4.82e-058282GO:0098645
GeneOntologyCellularComponentparaspeckles

PSPC1 HNRNPM

7.73e-0510282GO:0042382
GeneOntologyCellularComponentcomplex of collagen trimers

COL4A3 COL4A4

3.58e-0421282GO:0098644
GeneOntologyCellularComponentcollagen-containing extracellular matrix

COL4A3 COL4A4 COL17A1 COLQ HNRNPM

6.23e-04530285GO:0062023
GeneOntologyCellularComponentextracellular matrix

COL4A3 COL4A4 COL17A1 COLQ HNRNPM

1.62e-03656285GO:0031012
GeneOntologyCellularComponentexternal encapsulating structure

COL4A3 COL4A4 COL17A1 COLQ HNRNPM

1.64e-03658285GO:0030312
HumanPhenoGlomerular basement membrane lamellation

COL4A3 COL4A4

8.32e-06392HP:0030034
HumanPhenoThin glomerular basement membrane

COL4A3 COL4A4

8.32e-06392HP:0012577
HumanPhenoLenticonus

COL4A3 COL4A4

1.24e-041092HP:0001142
HumanPhenoThickened glomerular basement membrane

COL4A3 COL4A4

1.81e-041292HP:0004722
HumanPhenoAbnormal glomerular basement membrane morphology

COL4A3 COL4A4

2.14e-041392HP:0033282
HumanPhenoGlomerular subepithelial deposits

COL4A3 COL4A4

2.50e-041492HP:0033603
MousePhenosensorineural hearing impairment

COL4A3 COL4A4 CHD7

2.75e-0538223MP:0006329
MousePhenopodocyte foot process effacement

COL4A3 COL4A4 COL17A1

2.75e-0538223MP:0008140
MousePhenoabnormal renal glomerulus basement membrane morphology

COL4A3 COL4A4 COL17A1

4.30e-0544223MP:0011348
MousePhenopodocyte hypertrophy

COL4A4 COL17A1

4.94e-057222MP:0011871
MousePhenoabnormal podocyte foot process morphology

COL4A3 COL4A4 COL17A1

8.42e-0555223MP:0008059
MousePhenoabnormal podocyte morphology

COL4A3 COL4A4 COL17A1

1.73e-0470223MP:0005326
MousePhenoabnormal glomerular capsule visceral layer morphology

COL4A3 COL4A4 COL17A1

1.73e-0470223MP:0011497
MousePhenoabnormal neurohypophysis morphology

CHD7 ARNT2

3.56e-0418222MP:0004164
MousePhenohematuria

COL4A3 COL4A4

3.98e-0419222MP:0005161
MousePhenoglomerular crescent

COL4A3 COL4A4

3.98e-0419222MP:0011506
DomainRRM

EWSR1 SAFB PSPC1 RBM33 MYEF2 HNRNPM

4.35e-07217266SM00360
DomainRRM_dom

EWSR1 SAFB PSPC1 RBM33 MYEF2 HNRNPM

5.67e-07227266IPR000504
DomainRRM

EWSR1 SAFB PSPC1 RBM33 MYEF2 HNRNPM

6.12e-07230266PS50102
Domain-

EWSR1 SAFB PSPC1 RBM33 MYEF2 HNRNPM

8.65e-072442663.30.70.330
DomainNucleotide-bd_a/b_plait

EWSR1 SAFB PSPC1 RBM33 MYEF2 HNRNPM

1.20e-06258266IPR012677
DomainCollagen

COL4A3 COL4A4 COL17A1 COLQ

5.53e-0685264PF01391
DomainCollagen

COL4A3 COL4A4 COL17A1 COLQ

5.53e-0685264IPR008160
DomainRRM_1

EWSR1 SAFB PSPC1 MYEF2 HNRNPM

8.88e-06208265PF00076
DomainC4

COL4A3 COL4A4

2.79e-056262SM00111
Domain-

COL4A3 COL4A4

2.79e-0562622.170.240.10
DomainCollagen_VI_NC

COL4A3 COL4A4

2.79e-056262IPR001442
DomainNC1_IV

COL4A3 COL4A4

2.79e-056262PS51403
DomainC4

COL4A3 COL4A4

2.79e-056262PF01413
DomainPAS

NCOA2 ARNT2

5.48e-0425262PF00989
DomainPAS_fold

NCOA2 ARNT2

5.48e-0425262IPR013767
DomainPAC

NCOA2 ARNT2

5.93e-0426262SM00086
DomainPAC

NCOA2 ARNT2

5.93e-0426262IPR001610
DomainPAS

NCOA2 ARNT2

9.01e-0432262SM00091
DomainPAS

NCOA2 ARNT2

1.02e-0334262IPR000014
DomainPAS

NCOA2 ARNT2

1.02e-0334262PS50112
DomainCTDL_fold

COL4A3 COL4A4

9.66e-03107262IPR016187
Domain-

NCOA2 ARNT2

1.00e-021092624.10.280.10
DomainHLH

NCOA2 ARNT2

1.13e-02116262SM00353
DomainBHLH

NCOA2 ARNT2

1.15e-02117262PS50888
DomainbHLH_dom

NCOA2 ARNT2

1.17e-02118262IPR011598
PathwayPID_AVB3_INTEGRIN_PATHWAY

COL4A3 COL4A4 COL17A1 ADGRA2

5.74e-0674234M160
PathwayREACTOME_COLLAGEN_CHAIN_TRIMERIZATION

COL4A3 COL4A4 COL17A1

3.88e-0541233MM15538
PathwayREACTOME_COLLAGEN_CHAIN_TRIMERIZATION

COL4A3 COL4A4 COL17A1

4.81e-0544233M27812
PathwayPID_SYNDECAN_1_PATHWAY

COL4A3 COL4A4 COL17A1

5.50e-0546233M198
PathwayWP_MRNA_PROCESSING

COL4A3 EWSR1 PSPC1 RBM33 MYEF2 HNRNPM

6.59e-05451236MM15946
PathwayBIOCARTA_NPP1_PATHWAY

COL4A3 COL4A4

1.14e-0410232M22040
PathwayBIOCARTA_NPP1_PATHWAY

COL4A3 COL4A4

1.14e-0410232MM1560
PathwayREACTOME_ASSEMBLY_OF_COLLAGEN_FIBRILS_AND_OTHER_MULTIMERIC_STRUCTURES

COL4A3 COL4A4 COL17A1

1.28e-0461233M27103
PathwayREACTOME_COLLAGEN_BIOSYNTHESIS_AND_MODIFYING_ENZYMES

COL4A3 COL4A4 COL17A1

1.28e-0461233MM14637
PathwayBIOCARTA_VITCB_PATHWAY

COL4A3 COL4A4

1.39e-0411232M15422
PathwayREACTOME_COLLAGEN_DEGRADATION

COL4A3 COL4A4 COL17A1

1.48e-0464233M26953
PathwayBIOCARTA_VITCB_PATHWAY

COL4A3 COL4A4

1.66e-0412232MM1526
PathwayREACTOME_COLLAGEN_BIOSYNTHESIS_AND_MODIFYING_ENZYMES

COL4A3 COL4A4 COL17A1

1.70e-0467233M26999
PathwayBIOCARTA_ACE2_PATHWAY

COL4A3 COL4A4

1.96e-0413232MM1347
PathwayBIOCARTA_ACE2_PATHWAY

COL4A3 COL4A4

1.96e-0413232M12950
PathwayBIOCARTA_PLATELETAPP_PATHWAY

COL4A3 COL4A4

2.29e-0414232MM1458
PathwayBIOCARTA_PLATELETAPP_PATHWAY

COL4A3 COL4A4

2.29e-0414232M6487
PathwayREACTOME_COLLAGEN_FORMATION

COL4A3 COL4A4 COL17A1

2.47e-0476233MM14573
PathwayREACTOME_LAMININ_INTERACTIONS

COL4A3 COL4A4

2.64e-0415232MM14922
PathwayREACTOME_ANCHORING_FIBRIL_FORMATION

COL4A3 COL4A4

2.64e-0415232M27161
PathwayREACTOME_CROSSLINKING_OF_COLLAGEN_FIBRILS

COL4A3 COL4A4

3.83e-0418232M27164
PathwayREACTOME_CROSSLINKING_OF_COLLAGEN_FIBRILS

COL4A3 COL4A4

3.83e-0418232MM14882
PathwayREACTOME_COLLAGEN_FORMATION

COL4A3 COL4A4 COL17A1

4.06e-0490233M631
PathwayBIOCARTA_AMI_PATHWAY

COL4A3 COL4A4

4.75e-0420232M15394
PathwayREACTOME_NCAM1_INTERACTIONS

COL4A3 COL4A4

4.75e-0420232MM15061
PathwayBIOCARTA_INTRINSIC_PATHWAY

COL4A3 COL4A4

6.31e-0423232M15997
PathwayBIOCARTA_INTRINSIC_PATHWAY

COL4A3 COL4A4

6.31e-0423232MM1427
PathwayREACTOME_ENDOGENOUS_STEROLS

NCOA2 ARNT2

7.47e-0425232M11184
PathwayREACTOME_ENDOGENOUS_STEROLS

NCOA2 ARNT2

8.72e-0427232MM14844
PathwayREACTOME_REGULATION_OF_LIPID_METABOLISM_BY_PPARALPHA

MED15 NCOA2 ARNT2

8.96e-04118233M27316
PathwayREACTOME_LAMININ_INTERACTIONS

COL4A3 COL4A4

1.08e-0330232M27216
PathwayREACTOME_NON_INTEGRIN_MEMBRANE_ECM_INTERACTIONS

COL4A3 COL4A4

1.23e-0332232MM14924
PathwayREACTOME_DEGRADATION_OF_THE_EXTRACELLULAR_MATRIX

COL4A3 COL4A4 COL17A1

1.47e-03140233M587
PathwayREACTOME_NCAM_SIGNALING_FOR_NEURITE_OUT_GROWTH

COL4A3 COL4A4

1.73e-0338232MM14969
PathwayREACTOME_NCAM1_INTERACTIONS

COL4A3 COL4A4

2.11e-0342232M7169
PathwayPID_INTEGRIN3_PATHWAY

COL4A3 COL4A4

2.21e-0343232M53
PathwayREACTOME_SUMOYLATION_OF_TRANSCRIPTION_COFACTORS

NCOA2 SAFB

2.31e-0344232M27295
PathwayWP_NEPHROTIC_SYNDROME

COL4A3 COL4A4

2.42e-0345232M39864
PathwayREACTOME_ASSEMBLY_OF_COLLAGEN_FIBRILS_AND_OTHER_MULTIMERIC_STRUCTURES

COL4A3 COL4A4

2.97e-0350232MM14796
PathwayREACTOME_COLLAGEN_DEGRADATION

COL4A3 COL4A4

3.34e-0353232MM14566
PathwayREACTOME_SIGNALING_BY_PDGF

COL4A3 COL4A4

3.85e-0357232MM14713
PathwayREACTOME_SIGNALING_BY_PDGF

COL4A3 COL4A4

3.98e-0358232M2049
PathwayWP_CIRCADIAN_RHYTHM_GENES

NCOA2 PSPC1 ARNT2

4.10e-03201233M39605
PathwayREACTOME_NON_INTEGRIN_MEMBRANE_ECM_INTERACTIONS

COL4A3 COL4A4

4.12e-0359232M27218
PathwayREACTOME_NCAM_SIGNALING_FOR_NEURITE_OUT_GROWTH

COL4A3 COL4A4

4.68e-0363232M11187
PathwayPID_ERA_GENOMIC_PATHWAY

NCOA2 SAFB

4.83e-0364232M200
PathwayREACTOME_CYTOCHROME_P450_ARRANGED_BY_SUBSTRATE_TYPE

NCOA2 ARNT2

4.83e-0364232M5650
PathwayREACTOME_CYTOCHROME_P450_ARRANGED_BY_SUBSTRATE_TYPE

NCOA2 ARNT2

5.13e-0366232MM14839
PathwayPID_INTEGRIN1_PATHWAY

COL4A3 COL4A4

5.13e-0366232M18
PathwayREACTOME_REGULATION_OF_PTEN_STABILITY_AND_ACTIVITY

USP13 PSMD14

5.59e-0369232MM15540
PathwayREACTOME_REGULATION_OF_PTEN_STABILITY_AND_ACTIVITY

USP13 PSMD14

5.59e-0369232M27815
Pubmed

Comparative Application of BioID and TurboID for Protein-Proximity Biotinylation.

MED15 NCOA2 BCL9L EWSR1 ROMO1 PSPC1 RBM33 MYEF2 HNRNPM

8.57e-1145729932344865
Pubmed

The Eyes Absent family members EYA4 and EYA1 promote PLK1 activation and successful mitosis through tyrosine dephosphorylation.

MED15 NCOA2 EWSR1 PSPC1 RBM33

1.63e-0715229538360978
Pubmed

A genome-wide in situ hybridization map of RNA-binding proteins reveals anatomically restricted expression in the developing mouse brain.

COL4A3 EWSR1 SAFB PSPC1 MYEF2 HNRNPM

3.70e-0734729616033648
Pubmed

An inducible CRISPR/Cas9 screen identifies DTX2 as a transcriptional regulator of human telomerase.

MED15 BCL9L EWSR1 RBM33 HNRNPM

3.77e-0718029535198878
Pubmed

COL4A3/COL4A4 mutations and features in individuals with autosomal recessive Alport syndrome.

COL4A3 COL4A4

6.71e-07229224052634
Pubmed

Clinico-pathological correlations in 127 patients in 11 large pedigrees, segregating one of three heterozygous mutations in the COL4A3/ COL4A4 genes associated with familial haematuria and significant late progression to proteinuria and chronic kidney disease from focal segmental glomerulosclerosis.

COL4A3 COL4A4

6.71e-07229219357112
Pubmed

Type-IV collagen related diseases.

COL4A3 COL4A4

6.71e-07229212768082
Pubmed

Rare hereditary COL4A3/COL4A4 variants may be mistaken for familial focal segmental glomerulosclerosis.

COL4A3 COL4A4

6.71e-07229225229338
Pubmed

COL4A3/COL4A4 mutations producing focal segmental glomerulosclerosis and renal failure in thin basement membrane nephropathy.

COL4A3 COL4A4

6.71e-07229217942953
Pubmed

Polymorphisms in COL4A3 and COL4A4 genes associated with keratoconus.

COL4A3 COL4A4

6.71e-07229220029656
Pubmed

Mutation analysis of COL4A3 and COL4A4 genes in a Chinese autosomal-dominant Alport syndrome family.

COL4A3 COL4A4

6.71e-07229228674241
Pubmed

Persistent familial hematuria in children and the locus for thin basement membrane nephropathy.

COL4A3 COL4A4

6.71e-07229216235097
Pubmed

Two genes, COL4A3 and COL4A4 coding for the human alpha3(IV) and alpha4(IV) collagen chains are arranged head-to-head on chromosome 2q36.

COL4A3 COL4A4

6.71e-0722929537506
Pubmed

Whole exome sequencing reveals novel COL4A3 and COL4A4 mutations and resolves diagnosis in Chinese families with kidney disease.

COL4A3 COL4A4

6.71e-07229225381091
Pubmed

Collagen type IV (alpha3-alpha4) nephropathy: from isolated haematuria to renal failure.

COL4A3 COL4A4

6.71e-07229215280517
Pubmed

Identification of mutations in the alpha 3(IV) and alpha 4(IV) collagen genes in autosomal recessive Alport syndrome.

COL4A3 COL4A4

6.71e-0722927987396
Pubmed

Heterozygous COL4A3/COL4A4 mutations: the hidden part of the iceberg?

COL4A3 COL4A4

6.71e-07229235090027
Pubmed

The genetics of thin basement membrane nephropathy.

COL4A3 COL4A4

6.71e-07229215880327
Pubmed

The COL4A3 and COL4A4 Digenic Mutations in cis Result in Benign Familial Hematuria in a Large Chinese Family.

COL4A3 COL4A4

6.71e-07229229742505
Pubmed

Is there a dominant-negative effect in individuals with heterozygous disease-causing variants in COL4A3/COL4A4?

COL4A3 COL4A4

6.71e-07229238214412
Pubmed

Nine novel COL4A3 and COL4A4 mutations and polymorphisms identified in inherited membrane diseases.

COL4A3 COL4A4

6.71e-07229217216251
Pubmed

Heterozygous Urinary Abnormality-Causing Variants of COL4A3 and COL4A4 Affect Severity of Autosomal Recessive Alport Syndrome.

COL4A3 COL4A4

6.71e-07229235369551
Pubmed

Presumed COL4A3/COL4A4 Missense/Synonymous Variants Induce Aberrant Splicing.

COL4A3 COL4A4

6.71e-07229235386907
Pubmed

COL4A3/COL4A4 mutations: from familial hematuria to autosomal-dominant or recessive Alport syndrome.

COL4A3 COL4A4

6.71e-07229212028435
Pubmed

Polymorphism analysis of COL4A3 and COL4A4 genes in Greek patients with keratoconus.

COL4A3 COL4A4

6.71e-07229225083577
Pubmed

Identification of the NC1 domain of {alpha}3 chain as critical for {alpha}3{alpha}4{alpha}5 type IV collagen network assembly.

COL4A3 COL4A4

6.71e-07229220847057
Pubmed

Collagen type IV-related nephropathies in Portugal: pathogenic COL4A3 and COL4A4 mutations and clinical characterization of 25 families.

COL4A3 COL4A4

6.71e-07229225307543
Pubmed

COL4A3/COL4A4 mutations link familial hematuria and focal segmental glomerulosclerosis. glomerular epithelium destruction via basement membrane thinning?

COL4A3 COL4A4

6.71e-07229218661361
Pubmed

Genetic, Clinical, and Pathologic Backgrounds of Patients with Autosomal Dominant Alport Syndrome.

COL4A3 COL4A4

6.71e-07229227281700
Pubmed

[From Alport syndrome to benign familial hematuria: clinical and genetic aspect].

COL4A3 COL4A4

6.71e-07229216895672
Pubmed

How to resolve confusion in the clinical setting for the diagnosis of heterozygous COL4A3 or COL4A4 gene variants? Discussion and suggestions from nephrologists.

COL4A3 COL4A4

6.71e-07229232232700
Pubmed

ATAC and Mediator coactivators form a stable complex and regulate a set of non-coding RNA genes.

MED15 PSPC1 MYEF2 HNRNPM

1.90e-0610729420508642
Pubmed

Collagen IV diseases: A focus on the glomerular basement membrane in Alport syndrome.

COL4A3 COL4A4

2.01e-06329227576055
Pubmed

Novel COL4A5, COL4A4, and COL4A3 mutations in Alport syndrome.

COL4A3 COL4A4

2.01e-06329215954103
Pubmed

Genetic Variants of the COL4A3 , COL4A4 , and COL4A5 Genes Contribute to Thinned Glomerular Basement Membrane Lesions in Sporadic IgA Nephropathy Patients.

COL4A3 COL4A4

2.01e-06329236130833
Pubmed

A human-mouse chimera of the alpha3alpha4alpha5(IV) collagen protomer rescues the renal phenotype in Col4a3-/- Alport mice.

COL4A3 COL4A4

2.01e-06329214507670
Pubmed

Genetic diagnosis of Alport syndrome in 16 Chinese families.

COL4A3 COL4A4

2.01e-06329238433557
Pubmed

Alport syndrome: impact of digenic inheritance in patients management.

COL4A3 COL4A4

2.01e-06329227859054
Pubmed

Evidence of digenic inheritance in Alport syndrome.

COL4A3 COL4A4

2.01e-06329225575550
Pubmed

Sixteen novel mutations identified in COL4A3, COL4A4, and COL4A5 genes in Slovenian families with Alport syndrome and benign familial hematuria.

COL4A3 COL4A4

2.01e-06329217396119
Pubmed

A mouse Col4a4 mutation causing Alport glomerulosclerosis with abnormal collagen α3α4α5(IV) trimers.

COL4A3 COL4A4

2.01e-06329224522496
Pubmed

Collagen types in various layers of the human aorta and their changes with the atherosclerotic process.

COL4A3 COL4A4

2.01e-0632923089234
Pubmed

Collagen IV alpha 3, alpha 4, and alpha 5 chains in rodent basal laminae: sequence, distribution, association with laminins, and developmental switches.

COL4A3 COL4A4

2.01e-0632927962065
Pubmed

Novel mutations in COL4A3, COL4A4, and COL4A5 in Chinese patients with Alport Syndrome.

COL4A3 COL4A4

2.01e-06329228542346
Pubmed

Autosomal dominant form of type IV collagen nephropathy exists among patients with hereditary nephritis difficult to diagnose clinicopathologically.

COL4A3 COL4A4

2.01e-06329228704582
Pubmed

Identification of noncollagenous sites encoding specific interactions and quaternary assembly of alpha 3 alpha 4 alpha 5(IV) collagen: implications for Alport gene therapy.

COL4A3 COL4A4

2.01e-06329218930919
Pubmed

Integration of Genetic Testing and Pathology for the Diagnosis of Adults with FSGS.

COL4A3 COL4A4

2.01e-06329230647093
Pubmed

Four novel mutations identified in the COL4A3, COL4A4 and COL4A5 genes in 10 families with Alport syndrome.

COL4A3 COL4A4

2.01e-06329238978054
Pubmed

Unbiased next generation sequencing analysis confirms the existence of autosomal dominant Alport syndrome in a relevant fraction of cases.

COL4A3 COL4A4

2.01e-06329224033287
Pubmed

Next-generation sequencing in patients with familial FSGS: first report of collagen gene mutations in Tunisian patients.

COL4A3 COL4A4

2.01e-06329233654185
Pubmed

Characterization of assembly of recombinant type IV collagen alpha3, alpha4, and alpha5 chains in transfected cell strains.

COL4A3 COL4A4

2.01e-06329214633121
Pubmed

Alport Syndrome

COL4A3 COL4A4

2.01e-06329220301386
Pubmed

PRISMA and BioID disclose a motifs-based interactome of the intrinsically disordered transcription factor C/EBPα.

MED15 NCOA2 EWSR1 CHD7 SAFB PSPC1 PSMD14 RBM33

2.37e-06110329834189442
Pubmed

Proximity-dependent Mapping of the Androgen Receptor Identifies Kruppel-like Factor 4 as a Functional Partner.

MED15 NCOA2 BCL9L CHD7 RBM33

2.67e-0626829533640491
Pubmed

Nature and the multiple functions of the 67-kD elastin-/laminin binding protein.

COL4A3 COL4A4

4.02e-0642927827955
Pubmed

Genetics and clinical characteristics of keratoconus.

COL4A3 COL4A4

4.02e-06429220664914
Pubmed

In vitro interactions of oxidatively modified LDL with type I, II, III, IV, and V collagen, laminin, fibronectin, and poly-D-lysine.

COL4A3 COL4A4

6.70e-0652929409248
Pubmed

p54nrb acts as a transcriptional coactivator for activation function 1 of the human androgen receptor.

NCOA2 PSPC1

6.70e-06529212810069
Pubmed

Extracellular matrix signatures of human primary metastatic colon cancers and their metastases to liver.

COL4A3 COL4A4 COL17A1 COLQ

7.85e-0615329425037231
Pubmed

Insertional mutation of the collagen genes Col4a3 and Col4a4 in a mouse model of Alport syndrome.

COL4A3 COL4A4

1.00e-05629210534397
Pubmed

Stimulation of extracellular matrix components in the normal brain by invading glioma cells.

COL4A3 COL4A4

1.00e-0562929506531
Pubmed

HIV-1 gp160 protein-macrophage interactions modulate mesangial cell proliferation and matrix synthesis.

COL4A3 COL4A4

1.00e-0562927495302
Pubmed

A tumor derived motility factor that stimulates cell migration on extracellular matrix.

COL4A3 COL4A4

1.00e-0562929673377
Pubmed

Extracellular matrix of the human optic nerve head.

COL4A3 COL4A4

1.00e-0562922426947
Pubmed

Angiogenesis and collagen type IV expression in different endothelial cell culture systems.

COL4A3 COL4A4

1.00e-05629223551189
Pubmed

Monoclonal antibody to human basement membrane collagen type IV.

COL4A3 COL4A4

1.00e-0562926811420
Pubmed

Localization of type IV collagen a 1 to a 6 chains in basement membrane during mouse molar germ development.

COL4A3 COL4A4

1.00e-05629211732842
Pubmed

Developmental distribution of collagen IV isoforms and relevance to ocular diseases.

COL4A3 COL4A4

1.00e-05629219275937
Pubmed

Distribution of basement membrane proteins in normal and fibrotic human liver: collagen type IV, laminin, and fibronectin.

COL4A3 COL4A4

1.00e-0562926988303
Pubmed

Immunolocalization of collagen types, laminin and fibronectin in the normal human pancreas.

COL4A3 COL4A4

1.00e-0562926389236
Pubmed

Collagen IV in the developing lens capsule.

COL4A3 COL4A4

1.00e-05629212225806
Pubmed

Spatiotemporal profile of postsynaptic interactomes integrates components of complex brain disorders.

LRP1 NCOA2 EWSR1 CHD7 SIPA1 MYEF2 HNRNPM

1.12e-0596329728671696
Pubmed

Nidogen-1. Expression and ultrastructural localization during the onset of mesoderm formation in the early mouse embryo.

COL4A3 COL4A4

1.41e-05729210639489
Pubmed

Complex patterns of expression suggest extensive roles for the alpha 2 beta 1 integrin in murine development.

COL4A3 COL4A4

1.41e-0572927521231
Pubmed

Interstitial collagens I, III, and VI sequester and modulate the multifunctional cytokine oncostatin M.

COL4A3 COL4A4

1.41e-05729211711546
Pubmed

Regulation of protease nexin-1 target protease specificity by collagen type IV.

COL4A3 COL4A4

1.41e-0572928006028
Pubmed

Corneal cell proteins and ocular surface pathology.

COL4A3 COL4A4

1.41e-05729210416788
Pubmed

Hypoplastic basement membrane of the lens anlage in the inheritable lens aplastic mouse (lap mouse).

COL4A3 COL4A4

1.41e-05729210716744
Pubmed

Purification, partial characterization of rat kidney hyaluronic acid binding protein and its localization on the cell surface.

COL4A3 COL4A4

1.41e-0572921724753
Pubmed

Spatiotemporal-resolved protein networks profiling with photoactivation dependent proximity labeling.

EWSR1 SAFB PSPC1 PSMD14 RBM33

1.83e-0539929535987950
Pubmed

Transforming growth factor-beta and p-21: multiple molecular targets of decorin-mediated suppression of neoplastic growth.

COL4A3 COL4A4

1.87e-05829210382266
Pubmed

Differential gene expression during capillary morphogenesis in 3D collagen matrices: regulated expression of genes involved in basement membrane matrix assembly, cell cycle progression, cellular differentiation and G-protein signaling.

COL4A3 COL4A4

1.87e-05829211683410
Pubmed

Appearance and persistence of fibronectin in cartilage. Specific interaction of fibronectin with collagen type II.

COL4A3 COL4A4

1.87e-0582923997552
Pubmed

Type IV collagen α6 chain is a regulator of keratin 10 in keratinization of oral mucosal epithelium.

COL4A3 COL4A4

1.87e-05829229422532
Pubmed

Mice develop normally without tenascin.

COL4A3 COL4A4

1.87e-0582921383086
Pubmed

Molecular properties of wild-type and mutant betaIG-H3 proteins.

COL4A3 COL4A4

1.87e-05829211867580
Pubmed

ATG5 is required for B cell polarization and presentation of particulate antigens.

MED15 EWSR1 SAFB SIPA1 RBM33 MYEF2

2.10e-0570129630196744
Pubmed

Transcription factor protein interactomes reveal genetic determinants in heart disease.

EWSR1 CHD7 SAFB PSPC1 HNRNPM

2.11e-0541129535182466
Pubmed

MMP-9 from TNF alpha-stimulated keratinocytes binds to cell membranes and type I collagen: a cause for extended matrix degradation in inflammation?

COL4A3 COL4A4

2.41e-0592929878537
Pubmed

Analysis of candidate genes on chromosome 2 in oral cleft case-parent trios from three populations.

COL4A3 COL4A4

2.41e-05929216953426
Pubmed

Developmental changes in seminiferous tubule extracellular matrix components of the mouse testis: alpha 3(IV) collagen chain expressed at the initiation of spermatogenesis.

COL4A3 COL4A4

2.41e-0592928562707
Pubmed

Krüppel-like zinc-finger transcription factor KLF5/BTEB2 is a target for angiotensin II signaling and an essential regulator of cardiovascular remodeling.

COL4A3 COL4A4

2.41e-05929212101409
Pubmed

Gelatinase B (MMP-9) is not essential in the normal kidney and does not influence progression of renal disease in a mouse model of Alport syndrome.

COL4A3 COL4A4

2.41e-05929210880400
Pubmed

Loss of the collagen IV modifier prolyl 3-hydroxylase 2 causes thin basement membrane nephropathy.

COL4A3 COL4A4

2.41e-05929235499085
Pubmed

Characterization of high affinity binding between laminin and the acute-phase protein, serum amyloid A.

COL4A3 COL4A4

2.41e-0592928995276
Pubmed

Proteomic Analysis of the EWS-Fli-1 Interactome Reveals the Role of the Lysosome in EWS-Fli-1 Turnover.

MED15 BCL9L EWSR1 SAFB RBM33

2.48e-0542529524999758
Pubmed

Host cell interactome of HIV-1 Rev includes RNA helicases involved in multiple facets of virus production.

EWSR1 SAFB PSPC1 HNRNPM

2.53e-0520629422174317
Pubmed

Cytoplasmic Metadherin (MTDH) provides survival advantage under conditions of stress by acting as RNA-binding protein.

LRP1 COL4A4 ADGRA2 ARNT2

2.93e-0521429422199357
Pubmed

Interaction between Alzheimer's disease beta A4 precursor protein (APP) and the extracellular matrix: evidence for the participation of heparan sulfate proteoglycans.

COL4A3 COL4A4

3.01e-05102929136074
Pubmed

Distribution of fibronectin, type I collagen, type IV collagen, and laminin in the cardiac jelly of the mouse embryonic heart with retinoic acid-induced complete transposition of the great arteries.

COL4A3 COL4A4

3.01e-05102929415455
InteractionNUP35 interactions

MED15 NCOA2 BCL9L EWSR1 ROMO1 PSPC1 RBM33 MYEF2 HNRNPM

5.12e-09424299int:NUP35
InteractionDTX2 interactions

MED15 BCL9L EWSR1 RBM33 ARNT2 HNRNPM

6.37e-06330296int:DTX2
InteractionAR interactions

MED15 NCOA2 BCL9L CHD7 PSPC1 PSMD14 RBM33 MYEF2 HNRNPM

6.71e-06992299int:AR
InteractionTADA2A interactions

MED15 PSPC1 MYEF2 ARNT2 HNRNPM

8.53e-06198295int:TADA2A
InteractionEYA4 interactions

MED15 NCOA2 EWSR1 PSPC1 RBM33

2.29e-05243295int:EYA4
InteractionPAX9 interactions

NCOA2 BCL9L EWSR1 CHD7

3.46e-05130294int:PAX9
InteractionCEBPA interactions

MED15 NCOA2 EWSR1 CHD7 SAFB PSPC1 PSMD14 RBM33 HNRNPM

4.13e-051245299int:CEBPA
InteractionHNRNPM interactions

COL4A4 USP13 EWSR1 PSPC1 PSMD14 MYEF2 HNRNPM

5.81e-05723297int:HNRNPM
InteractionSAA1 interactions

COL4A3 COL4A4 SAFB

6.32e-0554293int:SAA1
InteractionMTDH interactions

LRP1 COL4A4 PSPC1 ADGRA2 ARNT2 HNRNPM

6.99e-05505296int:MTDH
InteractionSAFB2 interactions

EWSR1 SAFB PSMD14 RBM33

1.67e-04195294int:SAFB2
InteractionCEACAM5 interactions

EWSR1 HNRNPM

1.80e-0414292int:CEACAM5
InteractionSOX7 interactions

NCOA2 EWSR1 CHD7

2.20e-0482293int:SOX7
InteractionEWSR1 interactions

MED15 BCL9L EWSR1 SAFB PSPC1 RBM33 HNRNPM

2.37e-04906297int:EWSR1
InteractionHNRNPD interactions

MED15 USP13 EWSR1 SAFB MYEF2 HNRNPM

2.51e-04638296int:HNRNPD
InteractionGATA4 interactions

EWSR1 CHD7 SAFB PSPC1 HNRNPM

2.73e-04411295int:GATA4
Cytoband19p13.3-p13.2

SAFB HNRNPM

3.49e-051429219p13.3-p13.2
CytobandEnsembl 112 genes in cytogenetic band chr2q36

COL4A3 COL4A4

1.33e-0385292chr2q36
CytobandEnsembl 112 genes in cytogenetic band chr13q12

PSPC1 MIPEP

9.59e-03234292chr13q12
CytobandEnsembl 112 genes in cytogenetic band chr20q11

C20orf203 ROMO1

1.07e-02248292chr20q11
GeneFamilyRNA binding motif containing

EWSR1 SAFB PSPC1 RBM33 MYEF2 HNRNPM

1.17e-07213216725
GeneFamilyCollagens

COL4A3 COL4A4 COL17A1

1.99e-0546213490
GeneFamilyBasic helix-loop-helix proteins

NCOA2 ARNT2

7.14e-03110212420
CoexpressionNABA_BASEMENT_MEMBRANES

COL4A3 COL4A4 COLQ

1.17e-0540293M5887
CoexpressionNABA_COLLAGENS

COL4A3 COL4A4 COL17A1

1.46e-0543293MM17060
CoexpressionNABA_COLLAGENS

COL4A3 COL4A4 COL17A1

1.56e-0544293M3005
CoexpressionGSE22886_UNSTIM_VS_IL2_STIM_NKCELL_UP

MED15 PRDM4 PSPC1 SLC1A7

6.22e-05196294M4530
ToppCellsevere_influenza-B_memory|World / disease group, cell group and cell class (v2)

COL4A3 COL4A4 CHD7 PRDM4

4.55e-061722940ff38f9431cec73250c580a6010cb7891a3fe3f1
ToppCellPBMC-Mild-Lymphocyte-B-B_cell-B_memory-B_memory-0|Mild / Location, Disease Group, Cell group, Cell class and sub_cluster (2021.03.01)

COL4A3 COL4A4 CHD7 PRDM4

6.74e-0619029495b9334573eefb132daaa9371377ad60232006ae
ToppCellmild_COVID-19-B_memory|World / disease group, cell group and cell class (v2)

COL4A3 COL4A4 CHD7 PRDM4

7.17e-0619329469b70c838328fdc7dbb6b5449fe2811a5389a839
ToppCellmild_COVID-19-B_memory|mild_COVID-19 / disease group, cell group and cell class (v2)

COL4A3 COL4A4 CHD7 PRDM4

7.17e-061932947e6fe70928a50b0a8f12220e572c07c5670d092e
ToppCellsevere_COVID-19-B_memory|severe_COVID-19 / disease group, cell group and cell class (v2)

COL4A3 COL4A4 CHD7 PRDM4

7.62e-06196294c6e00cb59a88b9903cca233cefe05f80c5ea4153
ToppCellCOVID-19-COVID-19_Mild-Lymphocyte-B-B_memory|COVID-19_Mild / Disease, condition lineage and cell class

COL4A3 COL4A4 CHD7 PRDM4

8.09e-0619929454e392b4ebe601d4838739ff7de3ac6b2203c948
ToppCell368C-Myeloid-Monocyte-CD16+_Monocyte|368C / Donor, Lineage, Cell class and subclass (all cells)

COL4A3 SIPA1 MIPEP

1.40e-0415629325b0936960be4955b6a6d6b8a867fdd4be548f05
ToppCellPBMC-Mild-Myeloid-cDC-cDC-cDC_6|Mild / Location, Disease Group, Cell group, Cell class and sub_cluster (2021.03.01)

TRMT6 COL17A1 TUSC1

1.48e-041592936115cb03c2ad08e4c1b65893d522f685ff0bc692
ToppCellPBMC-Mild-Myeloid-cDC-cDC-cDC_6|Mild / Location, Disease Group, Cell group, Cell class and sub_cluster (2021.03.09)

TRMT6 COL17A1 TUSC1

1.51e-04160293a90eb621481fd07a821495db07d1032e109fd386
ToppCellAT1_cells-IPF_01|World / lung cells shred on cell class, cell subclass, sample id

COL4A3 COL4A4 ARNT2

1.56e-04162293ae2ba4f21f6f6c512006fa531d670b88be7c04c9
ToppCellAT1-AT2_cells-IPF_01|World / lung cells shred on cell class, cell subclass, sample id

COL4A3 COL4A4 ARNT2

1.56e-0416229357d627259d27f39885bf416d74bcb6656db6e27b
ToppCellInfluenza_Severe-B_memory|Influenza_Severe / Disease group and Cell class

COL4A3 COL4A4 CHD7

1.65e-0416529351172acaeb667b34b8b8c7878d67cfa0c4a2dffc
ToppCellP15-Epithelial-airway_epithelial_cell-ciliated_cell_of_airway|P15 / developmental_time, Lineage, Cell group, Cell type, Cell type_cellcyc-phase

COL4A4 USP13 COLQ

1.71e-041672935c3d0763f73628c71c71f9883556bb4f1639f3cc
ToppCellfacs-Marrow-B-cells-18m-Myeloid-monocyte_+_promonocyte|Marrow / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation

LRP1 ROMO1 COL17A1

1.80e-0417029318cd941bf3ca7cc0b6af1317bd2619d283353de0
ToppCellhealthy_donor-Myeloid-Monocytic-Developing_Neutrophil|healthy_donor / Disease condition, Lineage, Cell class and subclass

FAM157B CHD7 MIPEP

1.80e-04170293cfd7f29805b7c51666b0eaf269c36c96b8765a1a
ToppCellfacs-Marrow-B-cells-18m-Myeloid-promonocyte|Marrow / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation

LRP1 ROMO1 COL17A1

1.80e-041702936e82e41acd1299aa549a32ac036b39754abdf376
ToppCellAT1-AT2_cells-Donor_06|World / lung cells shred on cell class, cell subclass, sample id

COL4A3 COL4A4 COLQ

1.96e-04175293bdd85ba280648a0283c1984662a34c7b840f64dd
ToppCellPND14-Epithelial-Epithelial_Alveolar-Epithelial_Alveolar-AT1/AT2-AT1/AT2_mature|PND14 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif

COL4A3 COL4A4 USP13

1.96e-04175293cb974fbebe8cb58c7d3f7defabb4e056f2fee5fa
ToppCellAT1-AT2_cells-HP_01|World / lung cells shred on cell class, cell subclass, sample id

COL4A3 COL4A4 ARNT2

1.96e-041752939a95ab5c361ebaa8747983c5a0d69025682a19ad
ToppCellE18.5-Epithelial-Epithelial_Alveolar-Epithelial_Alveolar-AT1-AT1_prolif|E18.5 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif

COL4A3 COL4A4 USP13

1.96e-04175293711ace94fa9a763c6ae48171a690953f25deebe4
ToppCellPND14-Epithelial-Epithelial_Alveolar-Epithelial_Alveolar-AT1/AT2|PND14 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif

COL4A3 COL4A4 USP13

1.96e-0417529396219e58dcb327fd27190be78193e7a0d611e62b
ToppCelldroplet-Liver-LIVER-30m-Endothelial-endothelial_cell_of_hepatic_sinusoid|Liver / Large_Intestine_Pancreas_Liver - method, tissue, subtissue, age, lineage, cell ontology and free annotation

COL4A4 COL17A1 ADGRA2

2.00e-041762934880fa20b50eb10358e08567e08559ef2954f237
ToppCelldroplet-Liver-LIVER-30m-Endothelial-endothelial_cell_of_hepatic_sinusoid|Liver / Large_Intestine_Pancreas_Liver - method, tissue, subtissue, age, lineage, cell ontology and free annotation

COL4A4 COL17A1 ADGRA2

2.00e-04176293fcdddd949ca05b3ecde240db9e38296a6eab2d6a
ToppCelldroplet-Liver-LIVER-30m-Endothelial|Liver / Large_Intestine_Pancreas_Liver - method, tissue, subtissue, age, lineage, cell ontology and free annotation

COL4A4 COL17A1 ADGRA2

2.00e-041762934d2fb51e71bed0d72f3d7f89d395744860885a5f
ToppCell3'-GW_trimst-1.5-LargeIntestine-Neuronal-Glial_immature-Glia_3_(BCAN+)|GW_trimst-1.5 / Celltypes from developing, pediatric, Crohn's, & adult GI tract

CHD7 MYEF2 ARNT2

2.03e-04177293d05497d2c80a66ec6a4e1733fea3a5534877a6a7
ToppCellCOVID-19_Moderate-B_memory|World / disease group, cell group and cell class

COL4A3 COL4A4 CHD7

2.13e-041802932f37187b866edb56410c2334b72713f2248dc335
ToppCellfacs-Lung-3m-Mesenchymal-fibroblast-adventitial_fibroblast-adventitial_fibroblast_l17|3m / method, tissue, age, lineage, sublineage, cell ontologies, cell type and subtype

COL4A3 COL4A4 SLC1A7

2.13e-0418029339ae8586efd91536e9ac6408d26de7e6d6237c41
ToppCell10x5'v1-week_14-16-Lymphocytic_NK-T_NK-ILC_precursor|week_14-16 / cell types per 3 fetal stages;per 3',per 5'

COL4A3 COL4A4 COLQ

2.13e-04180293a999a6d219a8e58a8b63802ddf8c95ffaab9cfa0
ToppCellsevere_influenza-B_memory|severe_influenza / disease group, cell group and cell class (v2)

COL4A3 COL4A4 CHD7

2.17e-0418129392e572c92109a6dae0f73138c57c3bbd2e0a2f36
ToppCellnormal-na-Lymphocytic_B-B_mem-male|normal / PBMC cell types (v2) per disease, treatment status, and sex

COL4A3 COL4A4 CHD7

2.20e-04182293ee36ea6cb9a5a08aeb83f2b7a249255f0b1a9870
ToppCellCOVID-19_Moderate-B_memory|COVID-19_Moderate / disease group, cell group and cell class

COL4A3 COL4A4 CHD7

2.20e-04182293bbdbef62389ac062118cc0c7979686393399f2c8
ToppCell5'-GW_trimst-2-LymphNode-Hematopoietic-T_cells-ILCP|GW_trimst-2 / Celltypes from developing, pediatric, Crohn's, & adult GI tract

COL4A3 COL4A4 COLQ

2.24e-041832934a1e5bf58d2acd9dbceeef538b6851c1e5e91059
ToppCellControl-Lymphocyte-B-B_memory|Control / Disease, Lineage and Cell Type

COL4A3 COL4A4 CHD7

2.24e-04183293491fa04a1d2caeeec6c6403c9a38b4a1257fc2bc
ToppCellHealthy/Control-B_memory|World / Disease group and Cell class

COL4A3 COL4A4 CHD7

2.27e-041842939e1879d86b535ede9b47deb0752e291f987a5d5e
ToppCelldroplet-Liver-Hepatocytes-24m-Endothelial|Liver / Large_Intestine_Pancreas_Liver - method, tissue, subtissue, age, lineage, cell ontology and free annotation

COL4A3 COL4A4 COL17A1

2.35e-041862932cae34336f184f971f7c8684cc27c23a4e7369ed
ToppCelldroplet-Liver-Hepatocytes-24m-Endothelial-endothelial_cell_of_hepatic_sinusoid|Liver / Large_Intestine_Pancreas_Liver - method, tissue, subtissue, age, lineage, cell ontology and free annotation

COL4A3 COL4A4 COL17A1

2.35e-0418629390d53c2597a9f3a2b39afba75adfc54f1ca0a4db
ToppCellCOVID-19_Severe-B_memory|World / disease group, cell group and cell class

COL4A3 COL4A4 CHD7

2.38e-04187293f29c71f2505bb64f3010ada491d422b87a6f7db3
ToppCelldroplet-Lung-1m-Mesenchymal-fibroblast-adventitial_fibroblast-adventitial_fibroblast_l17|1m / method, tissue, age, lineage, sublineage, cell ontologies, cell type and subtype

COL4A3 COL4A4 SLC1A7

2.38e-04187293ed7ab4cf4629d96dad5c74d536fc428d0a8d4eb9
ToppCellHealthy_donor-B_memory|World / disease group, cell group and cell class (v2)

COL4A3 COL4A4 CHD7

2.38e-041872934f68e3243071a4549c80aff8bff32c6ad892ee7f
ToppCellLA-01._Fibroblast_I|World / Chamber and Cluster_Paper

LRP1 COL4A3 COL4A4

2.38e-041872934ea486991f66c29728d127171a07b81404ec0b78
ToppCellPBMC-Mild-Lymphocyte-B-B_cell-B_memory-B_memory-3|Mild / Location, Disease Group, Cell group, Cell class and sub_cluster (2021.03.01)

COL4A3 COL4A4 CHD7

2.42e-04188293cd833a125a5279ac32a9a9cb9ecd05ae24bea3a9
ToppCellControl-Lymphoid_B-B_memory|Control / Disease group, lineage and cell class

COL4A3 COL4A4 CHD7

2.42e-04188293ba4245de3bee29118abab57c4fce60b2007a189c
ToppCellCOVID-19-kidney-DCT|COVID-19 / Disease (COVID-19 only), tissue and cell type

COL4A3 COL4A4 ARNT2

2.42e-041882931d56cd409793f05cca20757ab26e91f1a1ee67b5
ToppCellAT1-AT2_cells-Donor_01|World / lung cells shred on cell class, cell subclass, sample id

COL4A3 COL4A4 USP13

2.42e-04188293be710bc957118cf426dd71c2d57e6f1b41c9a467
ToppCellHealthy/Control-B_memory|Healthy/Control / Disease group and Cell class

COL4A3 COL4A4 CHD7

2.42e-041882933aff07f77b2b15e7a30e47b30115178abe64474e
ToppCellPBMC-Control-Lymphocyte-B-B_cell-B_memory|Control / Location, Disease Group, Cell group, Cell class and sub_cluster (2021.03.01)

COL4A3 COL4A4 CHD7

2.42e-041882939256c5f45c97df209bb9c322c3b557d4f726a333
ToppCellPBMC_fresh-frozen-Severe-critical_convalescent_d42-56-Lymphocytic-Lymphocytic_B-B_cell-B_c02-MS4A1-CD27|Severe-critical_convalescent_d42-56 / Compartment, severity and other cell annotations on 10x 3' data (130k)

COL4A3 COL4A4 CHD7

2.42e-041882935707786cc4452dc34f95db2b3cd29f6e025c0622
ToppCellPBMC-Severe-Lymphocyte-B-B_cell-B_memory-B_memory-0|Severe / Location, Disease Group, Cell group, Cell class and sub_cluster (2021.03.01)

COL4A3 COL4A4 CHD7

2.42e-04188293229108e7e3db49e1cfd747d69e338394139d95b3
ToppCellPBMC-Control-Lymphocyte-B-B_cell-B_memory-B_memory-0|Control / Location, Disease Group, Cell group, Cell class and sub_cluster (2021.03.01)

COL4A3 COL4A4 CHD7

2.42e-041882936f53bcd4caab2fc961af799039ea5c3ddae56781
ToppCellCOVID-19-kidney-DCT|kidney / Disease (COVID-19 only), tissue and cell type

COL4A3 COL4A4 ARNT2

2.42e-04188293df1fd0819d301679f3c9ea404e942e39095912eb
ToppCellrenal_cortex_nuclei-Renal_AKI_(acute_kidney_injury)-Epithelial-Distal_tubule_epithelial_cell|Renal_AKI_(acute_kidney_injury) / Celltypes from Cells and Nuclei per compartment and clinical group

COL4A3 COL4A4 ARNT2

2.46e-0418929355420853f730b433ef58ac9337ac84ac78a247a0
ToppCellrenal_cortex_nuclei-Renal_AKI_(acute_kidney_injury)-Epithelial-Distal_tubule_epithelial_cell-kidney_distal_convoluted_tubule_epithelial_cell|Renal_AKI_(acute_kidney_injury) / Celltypes from Cells and Nuclei per compartment and clinical group

COL4A3 COL4A4 ARNT2

2.46e-041892937eb8f5a951e80f1cfac4d7c9eb169f4eb100c917
ToppCellPBMC-Control-Lymphocyte-B-B_cell-B_memory-B_memory-3|Control / Location, Disease Group, Cell group, Cell class and sub_cluster (2021.03.01)

COL4A3 COL4A4 CHD7

2.46e-04189293ac0203f17b481d608587113ea2de0f383b29ed27
ToppCelldroplet-Liver-Hepatocytes-24m-Endothelial-endothelial_cell_of_hepatic_sinusoid|Liver / Large_Intestine_Pancreas_Liver - method, tissue, subtissue, age, lineage, cell ontology and free annotation

COL4A3 COL4A4 COL17A1

2.46e-04189293ce5b3d53c9a5457a5a02b221dee18334b5eaf8b7
ToppCellrenal_cortex_nuclei-Renal_AKI_(acute_kidney_injury)-Epithelial-Distal_tubule_epithelial_cell-kidney_distal_convoluted_tubule_epithelial_cell-Distal_Convoluted_Tubule_Cell_Type_1|Renal_AKI_(acute_kidney_injury) / Celltypes from Cells and Nuclei per compartment and clinical group

COL4A3 COL4A4 ARNT2

2.46e-04189293975c0f079903ae36b0ffa54e86294d42ec7697de
ToppCellHealthy_donor-B_memory|Healthy_donor / disease group, cell group and cell class (v2)

COL4A3 COL4A4 CHD7

2.50e-0419029346104a521f00d399315deca86699cb261b2795d6
ToppCellPBMC_fresh-frozen-Severe-critical_progression_d03-09-Lymphocytic-Lymphocytic_B-B_cell-B_c03-CD27-AIM2|Severe-critical_progression_d03-09 / Compartment, severity and other cell annotations on 10x 3' data (130k)

COL4A3 COL4A4 PRDM4

2.50e-041902930db545a4cba7534bad2693e0d565cde7dbc7a586
ToppCellCOVID-19_Severe-Lymphoid_B-B_memory|COVID-19_Severe / Disease group, lineage and cell class

COL4A3 COL4A4 CHD7

2.50e-04190293b6510c419a15ed049c0a0a6a6697b643668741c3
ToppCellSevere-MAIT|World / Disease group and Cell class

USP13 CHD7 COLQ

2.50e-041902937a92e0d6a021be23125495927b8571e25c83204a
ToppCell10x5'-bone_marrow-Lymphocytic_B-Memory_B_cells|bone_marrow / Manually curated celltypes from each tissue

COL4A3 COL4A4 PRDM4

2.54e-0419129367479df0ca4c5a792fd604aded3f75609fec0888
ToppCellrenal_cortex_nuclei-Renal_AKI_(acute_kidney_injury)-Mesenchymal-Fibroblast-Collagen+matrisome-high_fibroblast|Renal_AKI_(acute_kidney_injury) / Celltypes from Cells and Nuclei per compartment and clinical group

LRP1 COL4A4 ADGRA2

2.54e-0419129339092a0aff8097617820c59f5fea9ee2bb4f63a2
ToppCellControl-Lymphoid_B|Control / Disease group, lineage and cell class

COL4A3 COL4A4 CHD7

2.54e-041912930a760cd3a48c487ec899adb882fddea8914cfe0c
ToppCellrenal_medulla_nuclei-Hypertensive_with+without-CKD-Epithelial-Distal_tubule_epithelial_cell-kidney_loop_of_Henle_thick_ascending_limb_epithelial_cell-Cortical_Thick_Ascending_Limb_Cell|Hypertensive_with+without-CKD / Celltypes from Cells and Nuclei per compartment and clinical group

COL4A3 USP13 ARNT2

2.54e-04191293963f4f2e852bbb4faf070aafb0d368297abacd3b
ToppCellPBMC-Mild-Lymphocyte-B-B_cell-B_intermediate-B_intermediate-0|Mild / Location, Disease Group, Cell group, Cell class and sub_cluster (2021.03.01)

COL4A3 COL4A4 CHD7

2.54e-041912935a9a592875fbd0b1429b48db29a760fdc9c2c856
ToppCellControl-Lymphoid_B-B_intermediate|Control / Disease group, lineage and cell class

COL4A3 COL4A4 CHD7

2.54e-041912930082181dbc39c7c4fd3aa34c3ed61439548e844b
ToppCellPBMC-Control-Lymphocyte-B-B_cell-B_memory|Control / Location, Disease Group, Cell group, Cell class (2021.03.09)

COL4A3 COL4A4 CHD7

2.54e-0419129303f6da73e7b706252d2096507222229c4101a27b
ToppCellCOVID-19-kidney-Mito-rich_Distal|COVID-19 / Disease (COVID-19 only), tissue and cell type

COL4A3 COL4A4 ARNT2

2.54e-041912930965f621ebcd92ccdeb21cc27022180ce3cfe910
ToppCellCOVID-19-kidney-TAL|COVID-19 / Disease (COVID-19 only), tissue and cell type

COL4A3 COL4A4 ARNT2

2.54e-04191293fe55475ce0666ab5122447a813dc2369e24947b8
ToppCellPBMC-Control-Lymphocyte-B-B_cell-B_memory-|Control / Location, Disease Group, Cell group, Cell class and sub_cluster (2021.03.09)

COL4A3 COL4A4 CHD7

2.54e-04191293578b58782e816ecaeabfbc616ceb1dcd53ee428b
ToppCellB_cells|World / Immune cells in Rheumatoid Arthritis Joint Synovial Tissues

COL4A3 COL4A4 CHD7

2.54e-0419129372e3191990973440e4f91427208df360f73e4f41
ToppCellsevere_COVID-19-B_memory|World / disease group, cell group and cell class (v2)

COL4A3 COL4A4 CHD7

2.54e-041912933b57e353b74ebc866d0e11deeba31fa764c42325
ToppCellPBMC-Mild-Lymphocyte-B-B_cell-B_memory|Mild / Location, Disease Group, Cell group, Cell class and sub_cluster (2021.03.01)

COL4A3 COL4A4 CHD7

2.54e-0419129322134a2c1a92208bc1629a620ce73a56502613c2
ToppCellrenal_cortex_nuclei-Renal_AKI_(acute_kidney_injury)-Mesenchymal-Fibroblast-Collagen+matrisome-high_fibroblast-|Renal_AKI_(acute_kidney_injury) / Celltypes from Cells and Nuclei per compartment and clinical group

LRP1 COL4A4 ADGRA2

2.54e-04191293ee5f1b1c59029c46cbb1a00935c03b9317bb9da9
ToppCellPBMC-Mild-Lymphocyte-B-B_cell-B_memory|Mild / Location, Disease Group, Cell group, Cell class and sub_cluster (2021.03.09)

COL4A3 COL4A4 CHD7

2.58e-04192293314f74dd3c6d94839eed05b9a1a398217ef78029
ToppCellfacs-Heart-LV-3m-Mesenchymal-fibroblast_of_cardiac_tissue|Heart / Tongue_Heart_Limb_Muscle_Aorta_Diaphragm - method, tissue, subtissue, age, lineage, cell ontology and free annotation

LRP1 COL4A3 COL4A4

2.58e-04192293840a34c1b82d218be999ab5e1bcafd6370d7a4b1
ToppCellPBMC-Mild-Lymphocyte-B-B_cell-B_memory-|Mild / Location, Disease Group, Cell group, Cell class and sub_cluster (2021.03.09)

COL4A3 COL4A4 CHD7

2.58e-04192293debd471f61cf3606b8e9c246add0be5df601af7f
ToppCellcontrol-B_memory|control / Cohort 1 (10x PBMC) with disease condition, cell group and cell class

COL4A3 COL4A4 CHD7

2.58e-04192293d6ef271b6c4f9b49323650f3f773abd61c1b13c3
ToppCellsystemic_lupus_erythematosus-treated-Lymphocytic_B-B_mem-female|systemic_lupus_erythematosus / PBMC cell types (v2) per disease, treatment status, and sex

COL4A3 COL4A4 CHD7

2.58e-0419229380a71ab3434076803466ccac0df73468889c7dd3
ToppCell10x_3'_v3-tissue-resident_(10x_3'_v3)-lymphocytic-B_lymphocytic-B_cell|tissue-resident_(10x_3'_v3) / Per Platform+tissue_group, by lineage_subgroup, cell_group, cell_type

COL4A3 COL4A4 PRDM4

2.58e-041922930bda96d8f223e8fa9caf935079ab202fc5c812ee
ToppCellPBMC-Severe-Lymphocyte-B-B_cell-B_memory-|Severe / Location, Disease Group, Cell group, Cell class and sub_cluster (2021.03.09)

COL4A3 COL4A4 CHD7

2.58e-04192293dac61f0b374f6f9476eedce97f341f26c1bc037c
ToppCellPBMC-Control-Lymphocyte-B-B_cell-B_intermediate-|Control / Location, Disease Group, Cell group, Cell class and sub_cluster (2021.03.09)

COL4A3 COL4A4 CHD7

2.58e-04192293f9f64ad7bab1433e9a45adb7db7f43ce3f591b47
ToppCellCOVID-19-Heart-Fib_+_EC_+_Pericyte|Heart / Disease (COVID-19 only), tissue and cell type

LRP1 COL4A3 COL4A4

2.58e-0419229360b1312e84f6d6448365a952469c506c00b5fe93
ToppCellfacs-Heart-LV-3m-Mesenchymal-fibroblast_of_cardiac_tissue|Heart / Tongue_Heart_Limb_Muscle_Aorta_Diaphragm - method, tissue, subtissue, age, lineage, cell ontology and free annotation

LRP1 COL4A3 COL4A4

2.58e-04192293671d4e1eee5aba03c43dbc98f4b51ce42b3df5d5
ToppCellsystemic_lupus_erythematosus-treated-Lymphocytic_B-B_mem|systemic_lupus_erythematosus / PBMC cell types (v2) per disease, treatment status, and sex

COL4A3 COL4A4 CHD7

2.58e-0419229375ce635d669ff77d1fd54e10467f21d5e5d67b08
ToppCellB_cells-Memory_B_cells|World / Immune cells in Rheumatoid Arthritis Joint Synovial Tissues

COL4A3 COL4A4 CHD7

2.58e-04192293eef591095921ede098f41a2b81897b18915bb753
ToppCellPBMC-Control-Lymphocyte-B-B_cell-B_intermediate-B_intermediate-0|Control / Location, Disease Group, Cell group, Cell class and sub_cluster (2021.03.01)

COL4A3 COL4A4 CHD7

2.58e-0419229389b8ebdc285ed3c0f807fd1157271130d37dfa41
ToppCellPBMC-Severe-Lymphocyte-B-B_cell-B_memory|Severe / Location, Disease Group, Cell group, Cell class (2021.03.09)

COL4A3 COL4A4 CHD7

2.58e-0419229372f936f03bb9b58c1ccaaf8270c07f5bbf2ac355
ToppCellPBMC-Control-Lymphocyte-B-B_cell-B_intermediate|Control / Location, Disease Group, Cell group, Cell class (2021.03.09)

COL4A3 COL4A4 CHD7

2.58e-041922934884fd8ffa6fd6c30d7ac6bf447456b3397eabc5
ToppCellCOVID-19_Mild-Lymphoid_B-B_memory|COVID-19_Mild / Disease group, lineage and cell class

COL4A3 COL4A4 CHD7

2.58e-04192293d27db7669de95bddbea8ccb83e6f10ae7240b1ab
ToppCellPBMC_fresh-frozen-Severe-critical_progression_d03-09-Lymphocytic-Lymphocytic_B-B_cell-B_c02-MS4A1-CD27|Severe-critical_progression_d03-09 / Compartment, severity and other cell annotations on 10x 3' data (130k)

COL4A3 CHD7 PRDM4

2.62e-04193293bbea475d2c4c7b29674ff302529f8f83dd666dcb
ToppCellPBMC-Mild-Lymphocyte-B-B_cell-B_intermediate|Mild / Location, Disease Group, Cell group, Cell class and sub_cluster (2021.03.01)

COL4A3 COL4A4 CHD7

2.62e-041932937cc10e8b51091869d46e462f3214999e7b5348b1
ToppCellB_cells-Activate_B_cells|World / Immune cells in Kidney/Urine in Lupus Nephritis

COL4A3 COL4A4 CHD7

2.62e-04193293b6da81920cf2e55f87ec8d4b2b5530cbf7ba2155
ToppCellPBMC-Control-Lymphocyte-B-B_cell-B_intermediate|Control / Location, Disease Group, Cell group, Cell class and sub_cluster (2021.03.01)

COL4A3 COL4A4 CHD7

2.62e-041932938f1d6024ef092923321e6efd441b8d476db70aed
ToppCellPBMC_fresh-frozen-Severe-critical_progression_d12-22_no-steroids-Lymphocytic-Lymphocytic_B-B_cell-B_c03-CD27-AIM2|Severe-critical_progression_d12-22_no-steroids / Compartment, severity and other cell annotations on 10x 3' data (130k)

COL4A3 COL4A4 PRDM4

2.62e-041932939f798a1bbd9f076c3122d02ed28418c18bb7a369
ToppCellPBMC_fresh-frozen-Severe-critical_progression_d12-22_no-steroids-Lymphocytic-Lymphocytic_B-B_cell-B_c02-MS4A1-CD27|Severe-critical_progression_d12-22_no-steroids / Compartment, severity and other cell annotations on 10x 3' data (130k)

COL4A3 COL4A4 CHD7

2.66e-041942935cd72330c9d9bb21b6c9d5d35085eade101486d1
ToppCellPBMC-Mild-Lymphocyte-B-B_cell-B_intermediate|Mild / Location, Disease Group, Cell group, Cell class (2021.03.09)

COL4A3 COL4A4 CHD7

2.66e-041942932b61023a602d336ed0de174e9141046173db34e6
ToppCellPBMC-Control-Lymphocyte-B|Control / Location, Disease Group, Cell group, Cell class (2021.03.09)

COL4A3 COL4A4 CHD7

2.66e-0419429339121c7d537ac103f6959271d814fd327be7114f
ToppCellPBMC-Mild-Lymphocyte-B-B_cell-B_intermediate-|Mild / Location, Disease Group, Cell group, Cell class and sub_cluster (2021.03.09)

COL4A3 COL4A4 CHD7

2.66e-04194293f2486b19ac52a48d19f80b38a5536bee3dad745b
ToppCellLA-02._Fibroblast_II|LA / Chamber and Cluster_Paper

LRP1 COL4A3 COL4A4

2.66e-04194293234d1494c114cce77c619708bbcd8d5ce805f19b
ToppCellPBMC-Control-Lymphocyte-B-B_cell|Control / Location, Disease Group, Cell group, Cell class (2021.03.09)

COL4A3 COL4A4 CHD7

2.66e-0419429360542304899b99caa38e4abf6b71ba986fa6c399
DiseaseALPORT SYNDROME 2, AUTOSOMAL RECESSIVE

COL4A3 COL4A4

8.68e-072282C4746745
Diseasebenign familial hematuria (is_implicated_in)

COL4A3 COL4A4

8.68e-072282DOID:0111365 (is_implicated_in)
Diseaseautosomal recessive Alport syndrome (is_implicated_in)

COL4A3 COL4A4

8.68e-072282DOID:0110033 (is_implicated_in)
DiseaseAlport syndrome, recessive type

COL4A3 COL4A4

8.68e-072282C2931254
DiseaseAlport syndrome, dominant type

COL4A3 COL4A4

8.68e-072282C2931253
DiseaseThin basement membrane disease

COL4A3 COL4A4

8.68e-072282C0403440
DiseaseBenign familial hematuria

COL4A3 COL4A4

8.68e-072282cv:C0241908
DiseaseAlport syndrome

COL4A3 COL4A4

2.60e-063282cv:C1567741
Diseaseautosomal recessive Alport syndrome (implicated_via_orthology)

COL4A3 COL4A4

2.60e-063282DOID:0110033 (implicated_via_orthology)
DiseaseCollagen IV-related nephropathies

COL4A3 COL4A4

2.60e-063282cv:CN076135
DiseaseHematuria, Benign Familial

COL4A3 COL4A4

5.20e-064282C0241908
DiseaseAlport Syndrome

COL4A3 COL4A4

5.20e-064282C1567741
DiseaseAlport Syndrome, X-Linked

COL4A3 COL4A4

8.67e-065282C1567742
DiseaseAlport Syndrome, Autosomal Dominant

COL4A3 COL4A4

8.67e-065282C1567743
DiseaseAlport Syndrome, Autosomal Recessive

COL4A3 COL4A4

8.67e-065282C1567744
Diseasehypertensive nephropathy

COL4A3 COL4A4

1.30e-056282C0848548
Diseasecollagen disease (implicated_via_orthology)

COL4A3 COL4A4

5.70e-0512282DOID:854 (implicated_via_orthology)
Diseasebasophil percentage of granulocytes

C20orf203 NCOA2 CHD7

6.68e-0583283EFO_0007995
Diseasealbuminuria

COL4A3 COL4A4 CHD7

9.68e-0594283EFO_0004285
DiseaseRenal glomerular disease

COL4A3 COL4A4

2.17e-0423282C0268731
DiseaseGlomerulopathy Assessment

COL4A3 COL4A4

2.17e-0423282C4521256
DiseaseKallmann Syndrome

CHD7 ARNT2

2.78e-0426282C0162809
Diseasecolorectal carcinoma (is_marker_for)

NCOA2 HNRNPM

5.67e-0437282DOID:0080199 (is_marker_for)
Diseaseend stage renal disease (is_implicated_in)

COL4A3 COL4A4

6.96e-0441282DOID:783 (is_implicated_in)
Diseasemyopathy (implicated_via_orthology)

COL4A3 COL4A4

9.53e-0448282DOID:423 (implicated_via_orthology)
Diseasebasophil percentage of leukocytes

C20orf203 NCOA2 CHD7

1.55e-03243283EFO_0007992
DiseaseR-warfarin measurement

C20orf203 TUSC1 SLC1A7

1.99e-03265283EFO_0803324
Diseaseage at menopause

NCOA2 CHD7 ADGRA2

2.88e-03302283EFO_0004704
Diseaserefractive error

COL4A3 COL4A4 CHD7

3.57e-03326283MONDO_0004892

Protein segments in the cluster

PeptideGeneStartEntry
MEGPMGQRGREGPMG

COL17A1

616

Q9UMD9
MNSMRGGLPPREGRG

EWSR1

451

Q01844
RGIPGSMGNMGMPGS

COL4A3

1011

Q01955
MGAGGRRMRGAPARL

ADGRA2

1

Q96PE1
GMRGPEGAMGLPGMR

COL4A4

1386

P53420
GAMGIGQRNMGPRNM

CHD7

441

Q9P2D1
AGAMPARGGKRRSGM

ARNT2

36

Q9HBZ2
GVAGPMGRGRLMPNK

RBM33

1071

Q96EV2
LGMMGLPGSRGPMGS

COLQ

161

Q9Y215
GKGRPGIIRGMDMGA

LRP1

531

Q07954
MGAGMGFGLERMAAP

HNRNPM

486

P52272
RMVPAGMGAGLERMG

HNRNPM

531

P52272
GMGAGLERMGPVMDR

HNRNPM

536

P52272
LRAPAGRGRAMGGMP

C20orf203

126

Q8NBC4
GRGRAMGGMPRMGTV

C20orf203

131

Q8NBC4
MGGMPRMGTVGDFGQ

C20orf203

136

Q8NBC4
GGMGSLGAMGQPMSL

MED15

111

Q96RN5
MLRSMGGGQRPMGLG

FAM157B

136

P0CG42
TMGIMLGRMGDSGAP

SLC1A7

231

O00341
MQRPLGMAGSGMGQS

BCL9L

691

Q86UU0
MLPMGIGDRGVMCGL

PRDM4

71

Q9UKN5
MDRLLRLGGGMPGLG

PSMD14

1

O00487
MDRGFLSGPMGSGMR

MYEF2

501

Q9P2K5
GMRGRELMGGIGKTM

ROMO1

46

P60602
SIVGCPRQQGMMGGM

POTEJ

696

P0CG39
MPMWAGGVGSPRRGM

SIPA1

1

Q96FS4
GPGHMMNRGGMSGRG

SAFB

861

Q15424
KEQMGMPMGRFGGSG

NCOA2

431

Q15596
MPMGRFGGSGGMNHV

NCOA2

436

Q15596
GGGREPMLMVEGMLQ

MIPEP

671

Q99797
MRMGDMGPRGAINMG

PSPC1

391

Q8WXF1
GLVLGAMMERMGGFG

TRMT6

211

Q9UJA5
MQRRGALFGMPGGSG

USP13

1

Q92995
MGPMWRMRGGATRRG

TUSC1

1

Q2TAM9