Cluster composition

Functions

CategoryNameIntersectionWithQueryPValueGenesInTermGenesInQueryGenesInTermInQueryID
GeneOntologyMolecularFunctionstructural constituent of synapse

ERC1 ACTN1 POTEE POTEI

1.02e-04421164GO:0098918
GeneOntologyMolecularFunctiondamaged DNA binding

POLH PARP1 BRCA1 ZNF432 DCLRE1A

1.30e-04841165GO:0003684
GeneOntologyMolecularFunctiontubulin binding

CLIP1 KIF20B CDK5R1 BRCA1 KIF15 CEP135 MACF1 ARHGEF2 CEP57 VBP1

1.99e-0442811610GO:0015631
GeneOntologyMolecularFunctioncytoskeletal regulatory protein binding

CTTNBP2 ACTN1

3.31e-0451162GO:0005519
GeneOntologyCellularComponentpostsynaptic density

ERC1 ADAM10 CDK5R1 LRRTM4 LRRTM2 ANP32E MACF1 ARHGEF2 HOMER2 SNX1

1.96e-0445111510GO:0014069
GeneOntologyCellularComponentasymmetric synapse

ERC1 ADAM10 CDK5R1 LRRTM4 LRRTM2 ANP32E MACF1 ARHGEF2 HOMER2 SNX1

3.06e-0447711510GO:0032279
GeneOntologyCellularComponentcell leading edge

TRPV1 RIPOR2 IQGAP2 ACTN1 CLIP1 AMOTL1 MACF1 PKN2 ARHGEF2 SNX1

4.44e-0450011510GO:0031252
GeneOntologyCellularComponentpostsynaptic specialization

ERC1 ADAM10 CDK5R1 LRRTM4 LRRTM2 ANP32E MACF1 ARHGEF2 HOMER2 SNX1

4.65e-0450311510GO:0099572
GeneOntologyCellularComponentnuclear chromosome

SMCHD1 SFR1 PARP1 BRCA1 ANP32E POLD3 DNMT3L

5.18e-042541157GO:0000228
GeneOntologyCellularComponentperinuclear endoplasmic reticulum

ADAM10 OSBPL3 OSBP2

5.34e-04291153GO:0097038
GeneOntologyCellularComponentneuron to neuron synapse

ERC1 ADAM10 CDK5R1 LRRTM4 LRRTM2 ANP32E MACF1 ARHGEF2 HOMER2 SNX1

6.29e-0452311510GO:0098984
GeneOntologyCellularComponentmale pronucleus

RIF1 TET3

8.22e-0481152GO:0001940
GeneOntologyCellularComponenthistone deacetylase complex

NRIP1 HDAC5 GATAD2B ANP32E

1.25e-03851154GO:0000118
GeneOntologyCellularComponentfemale pronucleus

RIF1 TET3

1.31e-03101152GO:0001939
GeneOntologyCellularComponentpostsynapse

TRPV1 CTTNBP2 ERC1 ACTN1 ADAM10 RNF220 CDK5R1 LRRTM4 LRRTM2 ANP32E MACF1 ARHGEF2 HOMER2 SNX1

1.41e-03101811514GO:0098794
GeneOntologyCellularComponentpostsynaptic endosome membrane

ANP32E SNX1

1.60e-03111152GO:0098895
GeneOntologyCellularComponentmicrotubule organizing center

ERC1 SFR1 BBS9 CLIP1 KIF20B BRCA1 KIF15 CEP89 USO1 CEP135 PKN2 CEP57 DEUP1

1.63e-0391911513GO:0005815
DomainLeu-rich_rpt

LRRC57 AMN1 TLR7 LRRC47 NOD2 PPP1R7 LRIG3 LRRC31 SLIT1 LRRTM4 LRRTM2 ANP32E LRRC36

1.00e-0827111313IPR001611
DomainLRR

LRRC57 TLR7 LRRC47 NOD2 PPP1R7 LRIG3 SLIT1 LRRTM4 LRRTM2 ANP32E LRRC36

3.81e-0820111311PS51450
Domain-

LRRC57 AMN1 TLR7 LRRC47 NOD2 PPP1R7 LRIG3 LRRC31 SLIT1 LRRTM4 LRRTM2 ANP32E LRRC36

7.37e-08321113133.80.10.10
DomainLRR_1

LRRC57 TLR7 LRRC47 PPP1R7 LRIG3 LRRC31 SLIT1 LRRTM4 LRRTM2 ANP32E LRRC36

9.15e-0821911311PF00560
DomainL_dom-like

LRRC57 AMN1 TLR7 LRRC47 NOD2 PPP1R7 LRIG3 LRRC31 SLIT1 LRRTM4 LRRTM2 ANP32E LRRC36

9.46e-0832811313IPR032675
DomainLeu-rich_rpt_typical-subtyp

LRRC57 TLR7 LRRC47 PPP1R7 LRIG3 SLIT1 LRRTM4 LRRTM2

1.22e-051771138IPR003591
DomainLRR_TYP

LRRC57 TLR7 LRRC47 PPP1R7 LRIG3 SLIT1 LRRTM4 LRRTM2

1.22e-051771138SM00369
DomainPrefoldin

TPM4 LAMB1 KIF20B CEP135 VBP1

7.51e-05721135IPR009053
DomainLRR_8

LRRC57 TLR7 LRRC47 LRIG3 SLIT1 LRRTM4 LRRTM2

8.16e-051711137PF13855
DomainLAMININ_IVB

LAMB4 LAMB1

1.08e-0431132PS51116
DomainLaminin_IV_B

LAMB4 LAMB1

1.08e-0431132IPR013015
DomainLRRNT

TLR7 LRIG3 SLIT1 LRRTM4 LRRTM2

3.22e-04981135IPR000372
DomainLRRNT

TLR7 LRIG3 SLIT1 LRRTM4 LRRTM2

3.22e-04981135SM00013
DomainLRRCT

TLR7 LRIG3 SLIT1

9.41e-04321133PF01463
DomainARM_REPEAT

ARMC10 ODAD2 USO1

1.81e-03401133PS50176
DomainLRRcap

PPP1R7 ANP32E

1.93e-03111132SM00446
DomainU2A'_phosphoprotein32A_C

PPP1R7 ANP32E

1.93e-03111132IPR003603
DomainAnk_2

TRPV1 CTTNBP2 POTEE ANKRD12 POTEI AGAP1

1.97e-032151136PF12796
DomainOxysterol-bd

OSBPL3 OSBP2

2.30e-03121132IPR000648
DomainOxysterol-bd_CS

OSBPL3 OSBP2

2.30e-03121132IPR018494
DomainOxysterol_BP

OSBPL3 OSBP2

2.30e-03121132PF01237
DomainOSBP

OSBPL3 OSBP2

2.30e-03121132PS01013
DomainAnk

TRPV1 CTTNBP2 POTEE ANKRD12 POTEI AGAP1

2.65e-032281136PF00023
DomainPH

ARHGEF18 DGKH OSBPL3 OSBP2 ARHGEF2 AGAP1

2.70e-032291136PF00169
DomainDiacylglycerol_kinase_cat_dom

CERKL DGKH

3.62e-03151132IPR001206
DomainDAGK_cat

CERKL DGKH

3.62e-03151132PF00781
DomainDAGK

CERKL DGKH

3.62e-03151132PS50146
Domain-

TRPV1 CTTNBP2 POTEE ANKRD12 POTEI AGAP1

4.00e-0324811361.25.40.20
DomainLaminin_N

LAMB4 LAMB1

4.12e-03161132IPR008211
DomainLAMININ_NTER

LAMB4 LAMB1

4.12e-03161132PS51117
DomainLaminin_N

LAMB4 LAMB1

4.12e-03161132PF00055
DomainActin_CS

POTEE POTEI

4.12e-03161132IPR004001
DomainLamNT

LAMB4 LAMB1

4.12e-03161132SM00136
DomainANK

TRPV1 CTTNBP2 POTEE ANKRD12 POTEI AGAP1

4.24e-032511136SM00248
DomainANK_REPEAT

TRPV1 CTTNBP2 POTEE ANKRD12 POTEI AGAP1

4.40e-032531136PS50088
DomainAnkyrin_rpt-contain_dom

TRPV1 CTTNBP2 POTEE ANKRD12 POTEI AGAP1

4.49e-032541136IPR020683
DomainANK_REP_REGION

TRPV1 CTTNBP2 POTEE ANKRD12 POTEI AGAP1

4.49e-032541136PS50297
DomainLRR_6

AMN1 NOD2 LRRC31

4.50e-03551133PF13516
DomainARM-type_fold

RIPOR2 ARMC10 ODAD2 ARFGEF3 RIF1 USO1 XPO7

4.56e-033391137IPR016024
DomainACTINS_2

POTEE POTEI

4.65e-03171132PS00432
DomainNAD/diacylglycerol_kinase

CERKL DGKH

4.65e-03171132IPR016064
DomainActin/actin-like_CS

POTEE POTEI

5.21e-03181132IPR020902
DomainAnkyrin_rpt

TRPV1 CTTNBP2 POTEE ANKRD12 POTEI AGAP1

5.21e-032621136IPR002110
DomainBRCT

PARP1 BRCA1

5.80e-03191132PF00533
DomainACTINS_ACT_LIKE

POTEE POTEI

5.80e-03191132PS01132
PathwayREACTOME_DEUBIQUITINATION

TRIM4 TNIP3 USP25 TNIP1 NOD2 USP26 BRCA1 FKBP8 USP3

7.04e-05299849M27574
PathwayREACTOME_OVARIAN_TUMOR_DOMAIN_PROTEASES

TRIM4 TNIP3 TNIP1 NOD2

8.23e-0539844M27579
Pubmed

Genome-wide CRISPR screens identify novel regulators of wild-type and mutant p53 stability.

DOCK4 NRIP1 HDAC5 ERC1 TNIP1 TRIP11 KIF20B ARFGEF3 POTEE KIF15 USO1 N4BP2 ANP32E MACF1 POTEI GOLGB1

1.52e-105881171638580884
Pubmed

Prediction of the coding sequences of mouse homologues of KIAA gene: II. The complete nucleotide sequences of 400 mouse KIAA-homologous cDNAs identified by screening of terminal sequences of cDNA clones randomly sampled from size-fractionated libraries.

DOCK4 RIPOR2 HDAC5 ERC1 ARFGEF3 LRIG3 SLIT1 LRRTM2 MACF1 ANKRD12 TET3 XPO7

1.42e-084071171212693553
Pubmed

Spatiotemporal profile of postsynaptic interactomes integrates components of complex brain disorders.

CTTNBP2 IQGAP2 ERC1 ARHGEF18 CLIP1 TRIP11 GATAD2B PPP1R7 PARP1 KIF15 OSBPL3 N4BP2 CCAR1 MACF1 ARHGEF2 HOMER2 GOLGB1

2.57e-089631171728671696
Pubmed

Defining the proximal interaction networks of Arf GTPases reveals a mechanism for the regulation of PLD1 and PI4KB.

IQGAP2 TRIP11 ARFGEF3 LRIG3 RIF1 BRCA1 USO1 DDX18 AMOTL1 DCLRE1A FKBP8 SNX1 GOLGB1 AGAP1 XPO7

5.77e-087771171535844135
Pubmed

N-Terminal Acetyltransferase Naa40p Whereabouts Put into N-Terminal Proteoform Perspective.

TPM4 ATAD5 CDK12 ERC1 SMCHD1 TRIP11 PARP1 RIF1 ANP32E MACF1 PKN2 SNX1 VBP1 GOLGB1 RBM17

6.03e-079341171533916271
Pubmed

The in vivo Interaction Landscape of Histones H3.1 and H3.3.

ATAD5 SMCHD1 POLH KIF20B GATAD2B FSIP2 RNF220 PARP1 RIF1 BRCA1 USP3 ZNF292

1.06e-066081171236089195
Pubmed

Defining the human deubiquitinating enzyme interaction landscape.

LAMB4 CTTNBP2 USP25 LRRC47 BLMH USP26 RNF220 PARP1 BRCA1 AMOTL1 PKN2 FKBP8 ARHGEF2 USP3 VBP1

1.50e-0610051171519615732
Pubmed

Proximity-dependent biotin identification (BioID) reveals a dynamic LSD1-CoREST interactome during embryonic stem cell differentiation.

NRIP1 HDAC5 ERC1 POLH TNIP1 KIF20B KIF15 USO1 N4BP2 GOLGB1

1.61e-064181171034709266
Pubmed

H4K20me0 recognition by BRCA1-BARD1 directs homologous recombination to sister chromatids.

TICRR ATAD5 SMCHD1 SREBF1 G2E3 GATAD2B PARP1 RIF1 BRCA1 OSBPL3 DDX18 CCAR1 DCLRE1A USP3 ANAPC5 TET3 RBM17

1.61e-0612941171730804502
Pubmed

HSF1 phosphorylation establishes an active chromatin state via the TRRAP-TIP60 complex and promotes tumorigenesis.

ERC1 SMCHD1 SREBF1 LAMB1 CLIP1 TRIP11 PARP1 DDX18 FKBP8 YME1L1 SNX1 GOLGB1 RBM17

1.65e-067541171335906200
Pubmed

A high-throughput approach for measuring temporal changes in the interactome.

TPM4 USP25 LAMB1 ACTN1 CLIP1 AARSD1 LRRC47 BLMH PPP1R7 GRPEL1 SARS1 KIF15 ANP32E MACF1 POLD3 SNX1 VBP1 XPO7

1.81e-0614551171822863883
Pubmed

Proteomic characterization of chromosomal common fragile site (CFS)-associated proteins uncovers ATRX as a regulator of CFS stability.

ATAD5 SMCHD1 LAMB1 GATAD2B BLMH POTEE PARP1 RIF1 BRCA1 DDX18 CCAR1 DCLRE1A

2.18e-066521171231180492
Pubmed

Proteomic and Biochemical Comparison of the Cellular Interaction Partners of Human VPS33A and VPS33B.

HDAC5 ERC1 TRIP11 ARFGEF3 CEP89 PKN2 FKBP8 ARHGEF2

2.28e-06251117829778605
Pubmed

Inflammation-dependent overexpression of c-Myc enhances CRL4DCAF4 E3 ligase activity and promotes ubiquitination of ST7 in colitis-associated cancer.

ATAD5 USP25 ARMC10 KIF15 DDX18 LRRTM2 VBP1 GOLGB1

2.72e-06257117830945288
Pubmed

Multilevel proteomics reveals host perturbations by SARS-CoV-2 and SARS-CoV.

SMCHD1 LDAF1 TNIP1 ACVR2A CLIP1 LRRC47 LRIG3 RIF1 USO1 MACF1 FKBP8 POLD3 ARHGEF2 SNX1 GOLGB1

2.90e-0610611171533845483
Pubmed

Proteomic profiling of VCP substrates links VCP to K6-linked ubiquitylation and c-Myc function.

CPA4 SMCHD1 ACTN1 KIF20B AARSD1 LRRC47 BLMH PARP1 RIF1 DDX18 CCAR1 MACF1 PKN2 POLD3 ARHGEF2 USP3 YME1L1

2.94e-0613531171729467282
Pubmed

Proteome-wide identification of HSP70/HSC70 chaperone clients in human cells.

TPM4 KRT78 ACTN1 AARSD1 LRRC47 BLMH PARP1 GRPEL1 USO1 DDX18 CCAR1 ANP32E SNX1 VBP1 GOLGB1 RBM17 XPO7

3.37e-0613671171732687490
Pubmed

Direct interaction between hnRNP-M and CDC5L/PLRG1 proteins affects alternative splice site choice.

CDK12 SMCHD1 LRRC47 PARP1 RIF1 USO1 MACF1 PKN2 ARHGEF2 GOLGB1 RBM17

4.60e-065821171120467437
Pubmed

NOTCH1 nuclear interactome reveals key regulators of its transcriptional activity and oncogenic function.

SMCHD1 GATAD2B PARP1 RIF1 ARHGEF2 ANAPC5

5.17e-06129117623022380
Pubmed

An Interaction Landscape of Ubiquitin Signaling.

USP25 TNIP1 ACTN1 RNF220 BRCA1 KIF15 ANP32E MACF1 ARHGEF2 USP3

5.56e-064811171028190767
Pubmed

Characterization and Genetic Analyses of New Genes Coding for NOD2 Interacting Proteins.

TPM4 TNIP1 NOD2 GOLGB1

5.88e-0635117427812135
Pubmed

Oct4 links multiple epigenetic pathways to the pluripotency network.

SMCHD1 LAMB1 GATAD2B LRRC47 PARP1 RIF1 RBM17

6.00e-06203117722083510
Pubmed

A Degradation Motif in STAU1 Defines a Novel Family of Proteins Involved in Inflammation.

KRT78 ATAD5 ERC1 SARS1 BRCA1 DDX18 CCAR1 MACF1 DCLRE1A PKN2 ZNF292 RBM17

6.32e-067241171236232890
Pubmed

Chr21 protein-protein interactions: enrichment in proteins involved in intellectual disability, autism, and late-onset Alzheimer's disease.

NRIP1 ERC1 USP25 LAMB1 ACTN1 TRIP11 RNF220 PARP1 DDX18 KCNN1 CCAR1 MACF1 YME1L1 SNX1 AGAP1 ZNF292

6.63e-0612851171635914814
Pubmed

In-Depth In Vivo Crosslinking in Minutes by a Compact, Membrane-Permeable, and Alkynyl-Enrichable Crosslinker.

TPM4 IQGAP2 ERC1 SMCHD1 ACTN1 POTEE PARP1 GRPEL1 BRCA1 N4BP2 CCAR1 MACF1 POTEI ARHGEF2 CEP57 GOLGB1 ZNF292

6.82e-0614421171735575683
Pubmed

A central chaperone-like role for 14-3-3 proteins in human cells.

DOCK4 KRT78 ERC1 TRIP11 ARFGEF3 FSIP2 CEP89 USO1 OSBPL3 N4BP2 MACF1 ARHGEF2 GOLGB1

6.95e-068611171336931259
Pubmed

Tumor suppressor BAP1 nuclear import is governed by transportin-1.

TPM4 IQGAP2 CDK12 ERC1 ACTN1 BLMH PPP1R7 PARP1 SARS1 USO1 AMOTL1 ANP32E MACF1 POLD3 VBP1

7.55e-0611491171535446349
Pubmed

An organelle-specific protein landscape identifies novel diseases and molecular mechanisms.

HDAC5 IQGAP2 ERC1 ACTN1 BBS9 CLIP1 TRIP11 LRRC47 PPP1R7 TBC1D32 RIF1 NPHP3 OSBPL3 AMOTL1 YME1L1 AGAP1

9.35e-0613211171627173435
Pubmed

The E3 ubiquitin ligase HECTD1 contributes to cell proliferation through an effect on mitosis.

TICRR IQGAP2 ATAD5 CDK12 SMCHD1 KIF20B RIF1 DDX18 MACF1 ARHGEF2 YME1L1 RBM17

1.01e-057591171235915203
Pubmed

Comprehensive interactome profiling of the human Hsp70 network highlights functional differentiation of J domains.

ATAD5 LAMB1 TNIP1 LRRC47 PARP1 GRPEL1 SARS1 CEP89 N4BP2 DDX18 ANP32E MACF1 PKN2 FKBP8 YME1L1 SNX1 GOLGB1

1.02e-0514871171733957083
Pubmed

The ubiquitin ligase Uhrf2 is a master regulator of cholesterol biosynthesis and is essential for liver regeneration.

SMCHD1 SFR1 KIF20B RIF1 POLD3

1.11e-0586117537253089
Pubmed

The RNA-mediated estrogen receptor α interactome of hormone-dependent human breast cancer cell nuclei.

ATAD5 CDK12 ACTN1 KIF20B GATAD2B POTEE RIF1 BRCA1 ZNF277 CCAR1 MACF1 FKBP8 ARHGEF2 ANAPC5 YME1L1 GOLGB1 AGAP1

1.11e-0514971171731527615
Pubmed

Differential Potential of Pharmacological PARP Inhibitors for Inhibiting Cell Proliferation and Inducing Apoptosis in Human Breast Cancer Cells.

PARP1 BRCA1

1.12e-052117225981734
Pubmed

RIF1 counteracts BRCA1-mediated end resection during DNA repair.

RIF1 BRCA1

1.12e-052117223486525
Pubmed

Cordycepin blocks lung injury-associated inflammation and promotes BRCA1-deficient breast cancer cell killing by effectively inhibiting PARP.

PARP1 BRCA1

1.12e-052117221607289
Pubmed

Nanoparticle-mediated delivery of siRNA targeting Parp1 extends survival of mice bearing tumors derived from Brca1-deficient ovarian cancer cells.

PARP1 BRCA1

1.12e-052117221187397
Pubmed

Finer delineation and transcript map of the 7q31 locus deleted in myeloid neoplasms.

DOCK4 ZNF277

1.12e-052117216213364
Pubmed

Effect of adriamycin on BRCA1 and PARP-1 expression in MCF-7 breast cancer cells.

PARP1 BRCA1

1.12e-052117225337234
Pubmed

The Prognostic Value of BRCA1 and PARP Expression in Epithelial Ovarian Carcinoma: Immunohistochemical Detection.

PARP1 BRCA1

1.12e-052117227362900
Pubmed

BRCA1 and PARP1 mRNA expression during progression from normal breast to ductal carcinoma in situ and invasive breast cancer: a laser microdissection study.

PARP1 BRCA1

1.12e-052117230786684
Pubmed

PARP Theranostic Auger Emitters Are Cytotoxic in BRCA Mutant Ovarian Cancer and Viable Tumors from Ovarian Cancer Patients Enable Ex-Vivo Screening of Tumor Response.

PARP1 BRCA1

1.12e-052117233352773
Pubmed

Synthetic lethality of PARP inhibition in BRCA-network disrupted tumor cells is associated with interferon pathway activation and enhanced by interferon-γ.

PARP1 BRCA1

1.12e-052117222392482
Pubmed

Germline missense pathogenic variants in the BRCA1 BRCT domain, p.Gly1706Glu and p.Ala1708Glu, increase cellular sensitivity to PARP inhibitor olaparib by a dominant negative effect.

PARP1 BRCA1

1.12e-052117227742776
Pubmed

ZNF432 stimulates PARylation and inhibits DNA resection to balance PARPi sensitivity and resistance.

PARP1 ZNF432

1.12e-052117237823600
Pubmed

The polymorphism of SREBF1 gene rs11868035 G/A is associated with susceptibility to Parkinson's disease in a Chinese population.

SREBF1 USP25

1.12e-052117230231795
Pubmed

Phenotypic and Interaction Profiling of the Human Phosphatases Identifies Diverse Mitotic Regulators.

ATAD5 ERC1 BLMH PPP1R7 PARP1 RIF1 GRPEL1 KIF15 CEP89 CEP135 FKBP8 ARHGEF2 YME1L1 VBP1

1.22e-0510491171427880917
Pubmed

SRCAP complex promotes lung cancer progression by reprograming the oncogenic transcription of Hippo-YAP/TAZ signaling pathway.

TRIM4 CDK12 ERC1 SMCHD1 TNIP1 ACTN1 AMOTL1 PKN2 SNX1 VBP1

1.74e-055491171038280479
Pubmed

The Nse5/6-like SIMC1-SLF2 complex localizes SMC5/6 to viral replication centers.

ATAD5 CDK12 SMCHD1 POLH KIF20B GATAD2B PARP1 RIF1 BRCA1 DDX18 SIMC1 CCAR1 RBM17

2.05e-059541171336373674
Pubmed

Assembly of the U5 snRNP component PRPF8 is controlled by the HSP90/R2TP chaperones.

TPM4 ERC1 SMCHD1 ACTN1 LRRC47 PARP1 RIF1 SARS1 USO1 DDX18 ANP32E MACF1 PKN2 ARHGEF2 SNX1 GOLGB1

2.17e-0514151171628515276
Pubmed

Ubiquitin Specific Peptidase 15 (USP15) suppresses glioblastoma cell growth via stabilization of HECTD1 E3 ligase attenuating WNT pathway activity.

CTTNBP2 KIF15 OSBPL3

2.44e-0517117329299163
Pubmed

Prediction of the coding sequences of unidentified human genes. X. The complete sequences of 100 new cDNA clones from brain which can code for large proteins in vitro.

SMCHD1 TSC22D2 OSBPL3 CEP135 ARHGEF2

2.54e-0510211759734811
Pubmed

The nuclear interactome of DYRK1A reveals a functional role in DNA damage repair.

ERC1 AARSD1 LRRC47 ANAPC5 XPO7

3.06e-05106117531024071
Pubmed

Involvement of bleomycin hydrolase and poly(ADP-ribose) polymerase-1 in Ubc9-mediated resistance to chemotherapy agents.

BLMH PARP1

3.36e-053117227878232
Pubmed

ABINs: A20 binding inhibitors of NF-kappa B and apoptosis signaling.

TNIP3 TNIP1

3.36e-053117219464428
Pubmed

Overexpression of a protein fragment of RNA helicase A causes inhibition of endogenous BRCA1 function and defects in ploidy and cytokinesis in mammary epithelial cells.

PARP1 BRCA1

3.36e-053117212592385
Pubmed

BRCA1, PARP1 and γH2AX in acute myeloid leukemia: Role as biomarkers of response to the PARP inhibitor olaparib.

PARP1 BRCA1

3.36e-053117225483710
Pubmed

Haploinsufficiency of Parp1 accelerates Brca1-associated centrosome amplification, telomere shortening, genetic instability, apoptosis, and embryonic lethality.

PARP1 BRCA1

3.36e-053117217318223
Pubmed

RAD51 Mediates Resistance of Cancer Stem Cells to PARP Inhibition in Triple-Negative Breast Cancer.

PARP1 BRCA1

3.36e-053117228034904
Pubmed

Autoimmune response to PARP and BRCA1/BRCA2 in cancer.

PARP1 BRCA1

3.36e-053117225865228
Pubmed

Germline and somatic mutations in prostate cancer: focus on defective DNA repair, PARP inhibitors and immunotherapy.

PARP1 BRCA1

3.36e-053117231916449
Pubmed

Synthetic lethality between BRCA1 deficiency and poly(ADP-ribose) polymerase inhibition is modulated by processing of endogenous oxidative DNA damage.

PARP1 BRCA1

3.36e-053117231329989
Pubmed

BRCA1 or CDK12 loss sensitizes cells to CHK1 inhibitors.

CDK12 BRCA1

3.36e-053117229025359
Pubmed

BRCA1 promoter hypermethylation, 53BP1 protein expression and PARP-1 activity as biomarkers of DNA repair deficit in breast cancer.

PARP1 BRCA1

3.36e-053117224191908
Pubmed

NOD2 and CCDC122-LACC1 genes are associated with leprosy susceptibility in Brazilians.

NOD2 LACC1

3.36e-053117225367361
Pubmed

TLR3 deficiency impairs spinal cord synaptic transmission, central sensitization, and pruritus in mice.

TRPV1 TLR7

3.36e-053117222565312
Pubmed

New insights into the genetic basis of premature ovarian insufficiency: Novel causative variants and candidate genes revealed by genomic sequencing.

NRIP1 MACF1

3.36e-053117233036707
Pubmed

TGFβ induces "BRCAness" and sensitivity to PARP inhibition in breast cancer by regulating DNA-repair genes.

PARP1 BRCA1

3.36e-053117225103497
Pubmed

Synthetic lethality of PARP inhibition in cancers lacking BRCA1 and BRCA2 mutations.

PARP1 BRCA1

3.36e-053117221487248
Pubmed

A pro-inflammatory role for A20 and ABIN family proteins in human fibroblast-like synoviocytes in rheumatoid arthritis.

TNIP3 TNIP1

3.36e-053117222093807
Pubmed

The p115-interactive proteins GM130 and giantin participate in endoplasmic reticulum-Golgi traffic.

USO1 GOLGB1

3.36e-053117211035033
Pubmed

Stumbling blocks on the path to personalized medicine in breast cancer: the case of PARP inhibitors for BRCA1/2-associated cancers.

PARP1 BRCA1

3.36e-053117222586318
Pubmed

The CDK1 inhibitor RO3306 improves the response of BRCA-proficient breast cancer cells to PARP inhibition.

PARP1 BRCA1

3.36e-053117224378347
Pubmed

The PARP Inhibitor AZD2461 Provides Insights into the Role of PARP3 Inhibition for Both Synthetic Lethality and Tolerability with Chemotherapy in Preclinical Models.

PARP1 BRCA1

3.36e-053117227550455
Pubmed

Synthetic Lethal and Resistance Interactions with BET Bromodomain Inhibitors in Triple-Negative Breast Cancer.

ATAD5 CDK12 SMCHD1 GATAD2B PARP1 RIF1 DDX18 CCAR1 ANP32E POLD3 VBP1 RBM17 XPO7

3.85e-0510141171332416067
Pubmed

PTPN23 binds the dynein adaptor BICD1 and is required for endocytic sorting of neurotrophin receptors.

ARHGEF18 CCAR1 ARHGEF2

4.06e-0520117332079660
Pubmed

A human MAP kinase interactome.

TPM4 RIPOR2 LAMB1 ACTN1 RIF1 N4BP2 SIMC1 MACF1 GOLGB1

4.11e-05486117920936779
Pubmed

A protein-protein interaction network for human inherited ataxias and disorders of Purkinje cell degeneration.

NRIP1 SREBF1 LAMB1 TNIP1 ACTN1 TRIP11 RNF220 BRCA1 ZNF277 SLIT1

4.14e-056081171016713569
Pubmed

A High-Density Human Mitochondrial Proximity Interaction Network.

TPM4 ARMC10 DGKH TRIP11 ARFGEF3 POTEE PARP1 GRPEL1 SARS1 OSBPL3 DDX18 FKBP8 ARHGEF2 YME1L1 VBP1 GOLGB1

4.24e-0514961171632877691
Pubmed

Identifying biological pathways that underlie primordial short stature using network analysis.

KRT78 SMCHD1 ACTN1 BLMH PARP1 RIF1 DDX18 MACF1 FKBP8 ARHGEF2 GOLGB1 RBM17 XPO7

4.25e-0510241171324711643
Pubmed

Prediction of the coding sequences of mouse homologues of KIAA gene: IV. The complete nucleotide sequences of 500 mouse KIAA-homologous cDNAs identified by screening of terminal sequences of cDNA clones randomly sampled from size-fractionated libraries.

CTTNBP2 ARHGEF18 TNIP1 GATAD2B NPHP3 OSBPL3 N4BP2 CEP135 MACF1

4.59e-05493117915368895
Pubmed

Synaptic GAP and GEF Complexes Cluster Proteins Essential for GTP Signaling.

IQGAP2 ARHGEF18 ACTN1 MACF1 PKN2 HOMER2 AGAP1

4.85e-05281117728706196
Pubmed

Neddylation modification of the U3 snoRNA-binding protein RRP9 by Smurf1 promotes tumorigenesis.

TPM4 ERC1 ACTN1 POTEE DDX18

4.91e-05117117534662580
Pubmed

The functional interactome landscape of the human histone deacetylase family.

TPM4 HDAC5 GATAD2B RIF1 ANKRD12 CEP57 VBP1

5.79e-05289117723752268
Pubmed

HDLBP Promotes Hepatocellular Carcinoma Proliferation and Sorafenib Resistance by Suppressing Trim71-dependent RAF1 Degradation.

TPM4 IQGAP2 CDK12 SMCHD1 CLIP1 LRRC47 PARP1 RIF1 GRPEL1 USO1 OSBPL3 DDX18 CCAR1 ARHGEF2 RBM17

5.82e-0513711171536244648
Pubmed

Interactomic analysis reveals a homeostatic role for the HIV restriction factor TRIM5α in mitophagy.

LRRC57 TRIM4 USP25 BLMH PARP1 SARS1 FKBP8

6.17e-05292117735545034
Pubmed

The Hsp70-Hsp90 co-chaperone Hop/Stip1 shifts the proteostatic balance from folding towards degradation.

ACTN1 LRRC47 PARP1 RIF1 SARS1 USO1 DDX18 CCAR1 PKN2 FKBP8

6.18e-056381171033239621
Pubmed

Inhibition of Aurora-B kinase activity by poly(ADP-ribosyl)ation in response to DNA damage.

PARP1 BRCA1

6.70e-054117216179389
Pubmed

LACC1 Required for NOD2-Induced, ER Stress-Mediated Innate Immune Outcomes in Human Macrophages and LACC1 Risk Variants Modulate These Outcomes.

NOD2 LACC1

6.70e-054117231875558
Pubmed

ATR and GADD45alpha mediate HIV-1 Vpr-induced apoptosis.

PARP1 BRCA1

6.70e-054117215650754
Pubmed

Targeting MALAT1 induces DNA damage and sensitize non-small cell lung cancer cells to cisplatin by repressing BRCA1.

PARP1 BRCA1

6.70e-054117233030583
Pubmed

Impaired 53BP1/RIF1 DSB mediated end-protection stimulates CtIP-dependent end resection and switches the repair to PARP1-dependent end joining in G1.

RIF1 BRCA1

6.70e-054117227494840
Pubmed

Phosphorylation of the vesicle-tethering protein p115 by a casein kinase II-like enzyme is required for Golgi reassembly from isolated mitotic fragments.

USO1 GOLGB1

6.70e-054117210931861
Pubmed

Visualization of trigeminal ganglion sensory neuronal signaling regulated by Cdk5.

TRPV1 CDK5R1

6.70e-054117235263573
Pubmed

Hyper-active non-homologous end joining selects for synthetic lethality resistant and pathological Fanconi anemia hematopoietic stem and progenitor cells.

PARP1 BRCA1

6.70e-054117226916217
Pubmed

Golgin tethers define subpopulations of COPI vesicles.

USO1 GOLGB1

6.70e-054117215718469
Pubmed

Targeting the FANCJ-BRCA1 interaction promotes a switch from recombination to poleta-dependent bypass.

POLH BRCA1

6.70e-054117220173781
Pubmed

De novo DNA methylation drives 5hmC accumulation in mouse zygotes.

TET3 DNMT3L

6.70e-054117226751286
Pubmed

Association between C13ORF31, NOD2, RIPK2 and TLR10 polymorphisms and urothelial bladder cancer.

NOD2 LACC1

6.70e-054117222504414
Pubmed

Developmentally regulated expression of the LRRTM gene family during mid-gestation mouse embryogenesis.

LRRTM4 LRRTM2

6.70e-054117216860615
Pubmed

Reduced dosage of the modifiers of epigenetic reprogramming Dnmt1, Dnmt3L, SmcHD1 and Foxo3a has no detectable effect on mouse telomere length in vivo.

SMCHD1 DNMT3L

6.70e-054117221553025
InteractionFBXO42 interactions

DOCK4 ERC1 TNIP1 TRIP11 KIF20B ARFGEF3 POTEE PARP1 KIF15 USO1 MACF1 GOLGB1

3.32e-0825911612int:FBXO42
InteractionH3C1 interactions

HDAC5 ATAD5 SMCHD1 TNIP1 KIF20B GATAD2B ANKRD18B PARP1 RIF1 GRPEL1 SARS1 DDX18 ANP32E POLD3 USP3 ANAPC5 ZNF292

1.56e-0590111617int:H3C1
InteractionHDAC1 interactions

NRIP1 HDAC5 ERC1 POLH SREBF1 TNIP1 KIF20B GATAD2B TBC1D32 PARP1 CDK5R1 BRCA1 KIF15 USO1 CEP135 POLD3 VBP1 GOLGB1 DNMT3L

1.79e-05110811619int:HDAC1
InteractionSEPTIN10 interactions

ERC1 TRIP11 KIF20B BRCA1 KIF15 N4BP2 GOLGB1

2.00e-051441167int:SEPTIN10
InteractionPFN1 interactions

DOCK4 HDAC5 ERC1 TNIP1 ADAM10 TRIP11 PARP1 BRCA1 KIF15 N4BP2 MACF1 GOLGB1

3.77e-0550911612int:PFN1
InteractionHECTD1 interactions

NRIP1 TICRR IQGAP2 ATAD5 CDK12 SMCHD1 SREBF1 KIF20B AARSD1 PARP1 RIF1 LRRC31 DDX18 MACF1 ARHGEF2 YME1L1 RBM17

4.74e-0598411617int:HECTD1
InteractionREV1 interactions

POLH TSC22D2 BRCA1 POLD3

4.75e-05351164int:REV1
InteractionITPRID2 interactions

TNIP1 AARSD1 PARP1 BRCA1 LRRC31 FKBP8

6.84e-051201166int:ITPRID2
InteractionVCL interactions

TPM4 TRPV1 ACTN1 ADAM10 BRCA1 USO1 N4BP2 MACF1 ARHGEF2

6.85e-053051169int:VCL
InteractionCEBPB interactions

TPM4 TICRR KRT78 ERC1 SMCHD1 CLIP1 KIF20B GATAD2B BLMH PARP1 GRPEL1 BRCA1 USO1 DDX18 CCAR1 ANP32E FKBP8 POLD3 SNX1 VBP1 ZNF292

6.95e-05144311621int:CEBPB
InteractionBICD1 interactions

DOCK4 ERC1 ARHGEF18 CLIP1 N4BP2 CEP135 CCAR1 ARHGEF2

1.01e-042501168int:BICD1
InteractionCEP43 interactions

LAMB1 LRRC47 ARFGEF3 BRCA1 CEP89 CEP135 POTEI

1.16e-041901167int:CEP43
InteractionLRRC61 interactions

TNIP1 FKBP8 YME1L1 SNX1

1.18e-04441164int:LRRC61
InteractionH2BC8 interactions

ATAD5 SMCHD1 KIF20B GATAD2B POTEE PARP1 RIF1 BRCA1 ANP32E POLD3 USP3 ZNF292

1.22e-0457611612int:H2BC8
InteractionKDM4D interactions

SMCHD1 TNIP1 CCAR1 RBM17

1.29e-04451164int:KDM4D
InteractionPXN interactions

DOCK4 ERC1 ACTN1 ADAM10 TRIP11 N4BP2 MACF1 ARHGEF2 GOLGB1

1.36e-043341169int:PXN
InteractionSHANK3 interactions

CTTNBP2 ACTN1 ADAM10 ARFGEF3 PPP1R7 KIF15 USO1 MACF1 FKBP8 HOMER2 RBM17

1.38e-0449611611int:SHANK3
InteractionNID2 interactions

LAMB1 TNIP1 OSBPL3 LRRTM4 POTEI

1.39e-04861165int:NID2
InteractionDCTN1 interactions

TRPV1 TNIP1 ADAM10 CLIP1 NOD2 BRCA1 USO1 CCAR1 MACF1 ARHGEF2 SNX1

1.40e-0449711611int:DCTN1
InteractionFXR1 interactions

HDAC5 TNIP1 ACTN1 ADAM10 CLIP1 CEP89 N4BP2 SLIT1 KCNN1 CCAR1 ARHGEF2 HOMER2 GOLGB1

1.46e-0467911613int:FXR1
CytobandEnsembl 112 genes in cytogenetic band chr7q31

DOCK4 LAMB4 CTTNBP2 LAMB1 ZNF277

3.13e-051401175chr7q31
Cytoband17q21

HDAC5 TOB1 BRCA1

5.73e-0463117317q21
CytobandEnsembl 112 genes in cytogenetic band chr11q21

AMOTL1 CEP57 DEUP1

5.73e-04631173chr11q21
Cytoband10q25.1

SFR1 DCLRE1A

8.54e-0417117210q25.1
Cytoband7q31.1

DOCK4 ZNF277

1.31e-032111727q31.1
Cytoband10p14

ERVK-16 YME1L1

2.01e-0326117210p14
Cytoband7q31

LAMB4 CTTNBP2

2.17e-032711727q31
Cytoband17q11.2

ATAD5 BLMH CDK5R1

2.86e-03110117317q11.2
Cytoband21q11.2

NRIP1 USP25

3.04e-0332117221q11.2
GeneFamilyAnkyrin repeat domain containing

TRPV1 CTTNBP2 ANKRD18B POTEE ANKRD12 POTEI AGAP1

3.42e-05242687403
GeneFamilyPleckstrin homology domain containing|Rho guanine nucleotide exchange factors|C2 domain containing

ARHGEF18 DGKH OSBPL3 OSBP2 ARHGEF2 AGAP1

1.24e-04206686682
GeneFamilyLaminin subunits

LAMB4 LAMB1

8.98e-0412682626
GeneFamilyOxysterol binding proteins|Pleckstrin homology domain containing

OSBPL3 OSBP2

8.98e-0412682670
GeneFamilyAnkyrin repeat domain containing|POTE ankyrin domain containing

POTEE POTEI

1.06e-0313682685
GeneFamilyUbiquitin specific peptidases

USP25 USP26 USP3

1.22e-0356683366
GeneFamilyArmadillo repeat containing|Protein phosphatase 1 regulatory subunits

ARFGEF3 PPP1R7 BRCA1 POLD3

4.81e-03181684694
CoexpressionHAMAI_APOPTOSIS_VIA_TRAIL_UP

NRIP1 CTTNBP2 IQGAP2 SMCHD1 USP25 CLIP1 TRIP11 KIF20B RIF1 BRCA1 KIF15 CCAR1 CEP57 GOLGB1 RBM17

1.92e-0765611515M18979
CoexpressionKINSEY_TARGETS_OF_EWSR1_FLII_FUSION_UP

TICRR ATAD5 G2E3 KIF20B BLMH PPP1R7 PARP1 RIF1 GRPEL1 BRCA1 KIF15 OSBPL3 N4BP2 DDX18 CEP135 ANP32E POLD3 YME1L1 AGAP1 XPO7

8.03e-07129011520M80
CoexpressionGSE14415_INDUCED_VS_NATURAL_TREG_DN

TPM4 ATAD5 AARSD1 BRCA1 KIF15 FKBP8 ANAPC5 RBM17

1.40e-061811158M2969
CoexpressionDACOSTA_UV_RESPONSE_VIA_ERCC3_DN

DOCK4 NRIP1 ERC1 SMCHD1 TSC22D2 ADAM10 CLIP1 KIF20B RIF1 BRCA1 CEP135 MACF1 PKN2 AGAP1 ZNF292

5.21e-0685611515M4500
CoexpressionZHONG_PFC_C1_OPC

G2E3 ACTN1 SFR1 KIF20B BRCA1 KIF15 CEP135 ANP32E

1.05e-052381158M39096
CoexpressionGSE27241_WT_VS_RORGT_KO_TH17_POLARIZED_CD4_TCELL_TREATED_WITH_DIGOXIN_UP

TICRR IQGAP2 ERC1 RIF1 BRCA1 KIF15 MACF1

1.50e-051801157M8239
CoexpressionZHANG_BREAST_CANCER_PROGENITORS_UP

CTTNBP2 SMCHD1 ARMC10 PARP1 RIF1 BRCA1 N4BP2 ANP32E POLD3 VBP1

2.22e-0543411510M15150
CoexpressionGSE2405_HEAT_KILLED_LYSATE_VS_LIVE_A_PHAGOCYTOPHILUM_STIM_NEUTROPHIL_9H_DN

IQGAP2 ERC1 ZNF277 N4BP2 DDX18 ANP32E YME1L1

2.87e-051991157M6199
CoexpressionZHANG_BREAST_CANCER_PROGENITORS_UP

CTTNBP2 SMCHD1 ARMC10 PARP1 RIF1 BRCA1 N4BP2 ANP32E POLD3 VBP1

2.90e-0544811510MM1044
CoexpressionGSE25085_FETAL_LIVER_VS_ADULT_BM_SP4_THYMIC_IMPLANT_DN

ATAD5 G2E3 KIF20B CEP89 ZNF277 ANP32E USP3

2.96e-052001157M8069
CoexpressionGSE16385_MONOCYTE_VS_12H_ROSIGLITAZONE_TREATED_MACROPHAGE_UP

NRIP1 CLIP1 ARFGEF3 GRPEL1 LACC1 LRRTM4 ZNF292

2.96e-052001157M7905
CoexpressionGSE22886_IGG_IGA_MEMORY_BCELL_VS_BM_PLASMA_CELL_UP

NRIP1 RIPOR2 SMCHD1 USP25 ARHGEF18 CEP135 POLD3

2.96e-052001157M4449
CoexpressionGEORGES_TARGETS_OF_MIR192_AND_MIR215

TPM4 TICRR TRPV1 ATAD5 G2E3 ACVR2A SFR1 KIF20B NOD2 NPHP3 BRCA1 KIF15 N4BP2 MACF1

3.71e-0589211514M18120
CoexpressionDACOSTA_UV_RESPONSE_VIA_ERCC3_COMMON_DN

NRIP1 SMCHD1 ADAM10 CLIP1 KIF20B BRCA1 CEP135 PKN2 AGAP1 ZNF292

4.04e-0546611510M13522
CoexpressionKAUFFMANN_DNA_REPAIR_GENES

POLH PARP1 RIF1 BRCA1 N4BP2 DCLRE1A POLD3

7.17e-052301157M11563
CoexpressionFAN_EMBRYONIC_CTX_NSC_2

ATAD5 G2E3 ACTN1 KIF20B KIF15 CEP135 ANP32E

7.78e-052331157M39036
CoexpressionFISCHER_DREAM_TARGETS

TICRR ATAD5 SMCHD1 G2E3 SFR1 KIF20B RIF1 BRCA1 KIF15 CEP135 ANP32E DCLRE1A POLD3 CEP57

9.01e-0596911514M149
CoexpressionCUI_TCF21_TARGETS_2_DN

DOCK4 RIPOR2 CTTNBP2 IQGAP2 USP25 ARHGEF18 DGKH CLIP1 TRIP11 ARFGEF3 TOB1 AMOTL1 MACF1

9.74e-0585411513M1533
CoexpressionPUJANA_XPRSS_INT_NETWORK

KIF20B BLMH RIF1 BRCA1 ANP32E CEP57

1.00e-041681156M18811
CoexpressionPUJANA_ATM_PCC_NETWORK

LAMB4 RIPOR2 SMCHD1 ARHGEF18 ADAM10 BBS9 KIF20B BLMH PARP1 RIF1 BRCA1 OSBPL3 DDX18 CEP135 ANP32E CEP57 YME1L1

1.23e-04139411517M9585
CoexpressionGSE12001_MIR223_KO_VS_WT_NEUTROPHIL_UP

DOCK4 TNIP3 TLR7 PPP1R7 GRPEL1 ANP32E

1.25e-041751156M396
CoexpressionGSE3920_UNTREATED_VS_IFNB_TREATED_ENDOTHELIAL_CELL_DN

RIPOR2 IQGAP2 POLH ACTN1 DCLRE1A XPO7

1.25e-041751156M6694
CoexpressionJOHNSTONE_PARVB_TARGETS_3_DN

SMCHD1 POLH G2E3 ACTN1 KIF20B RIF1 KIF15 N4BP2 CCAR1 ANP32E POLD3 CEP57 RBM17

1.27e-0487711513M2241
CoexpressionDAVICIONI_MOLECULAR_ARMS_VS_ERMS_UP

TRPV1 RIPOR2 HDAC5 TSC22D2 ADAM10 CLIP1 PARP1 ARHGEF2

1.31e-043401158M2012
CoexpressionCUI_TCF21_TARGETS_2_DN

DOCK4 RIPOR2 CTTNBP2 IQGAP2 USP25 ARHGEF18 DGKH CLIP1 TRIP11 ARFGEF3 TOB1 AMOTL1 MACF1

1.43e-0488811513MM1018
CoexpressionLAIHO_COLORECTAL_CANCER_SERRATED_UP

LAMB1 ADAM10 ANP32E MACF1 YME1L1

1.56e-041151155M16586
CoexpressionGSE14415_TCONV_VS_FOXP3_KO_INDUCED_TREG_DN

ATAD5 AARSD1 BRCA1 KIF15 ANP32E ANAPC5

1.70e-041851156M2965
CoexpressionMARTINEZ_RESPONSE_TO_TRABECTEDIN_DN

RNF220 CDK5R1 PKN2 POLD3 ARHGEF2 USP3 RBM17

2.03e-042721157M15123
CoexpressionGSE26928_EFF_MEMORY_VS_CXCR5_POS_CD4_TCELL_DN

NRIP1 ACTN1 BBS9 RIF1 N4BP2 CEP135

2.19e-041941156M4687
CoexpressionGSE9988_LOW_LPS_VS_ANTI_TREM1_AND_LPS_MONOCYTE_UP

IPPK TNIP3 TNIP1 ACVR2A LACC1 CEP135

2.32e-041961156M5862
CoexpressionGSE21546_WT_VS_ELK1_KO_ANTI_CD3_STIM_DP_THYMOCYTES_DN

IPPK TICRR G2E3 BRCA1 DCLRE1A POLD3

2.32e-041961156M7551
CoexpressionGSE11057_NAIVE_VS_MEMORY_CD4_TCELL_DN

TPM4 IQGAP2 TNIP1 NOD2 OSBPL3 GOLGB1

2.45e-041981156M3119
CoexpressionHE_LIM_SUN_FETAL_LUNG_C4_CYCLING_T_CELL

ATAD5 POLH SREBF1 G2E3 ACTN1 KIF20B RIF1 TOB1 BRCA1 KIF15 N4BP2 CEP135 POLD3

2.47e-0493911513M45768
CoexpressionGSE9988_ANTI_TREM1_VS_LPS_MONOCYTE_DN

RIPOR2 TNIP3 TLR7 ACVR2A SFR1 RBM17

2.52e-041991156M5845
CoexpressionHALLMARK_MITOTIC_SPINDLE

DOCK4 CLIP1 KIF20B KIF15 ARHGEF2 CEP57

2.52e-041991156M5893
CoexpressionGSE43863_TFH_VS_LY6C_INT_CXCR5POS_EFFECTOR_CD4_TCELL_DN

TLR7 CLIP1 CDK5R1 LACC1 DDX18 RBM17

2.52e-041991156M9749
CoexpressionGSE3982_NEUTROPHIL_VS_NKCELL_DN

CPA4 BBS9 LRRC47 BLMH PPP1R7 OSBPL3

2.52e-041991156M5531
CoexpressionGSE3720_VD1_VS_VD2_GAMMADELTA_TCELL_WITH_LPS_STIM_DN

LRRC57 G2E3 USO1 OSBPL3 ARHGEF2 ANAPC5

2.58e-042001156M6354
CoexpressionGSE15330_WT_VS_IKAROS_KO_MEGAKARYOCYTE_ERYTHROID_PROGENITOR_UP

ADAM10 BLMH RIF1 ZNF277 ARHGEF2 ANGPTL7

2.58e-042001156M7039
CoexpressionGSE360_CTRL_VS_B_MALAYI_HIGH_DOSE_MAC_DN

SREBF1 ACTN1 TSC22D2 BBS9 CLIP1 ANGPTL7

2.58e-042001156M5167
CoexpressionGSE44649_NAIVE_VS_ACTIVATED_CD8_TCELL_MIR155_KO_DN

RIPOR2 ATAD5 ACVR2A PARP1 RIF1 PKN2

2.58e-042001156M9777
CoexpressionGSE12392_CD8A_POS_VS_NEG_SPLEEN_DC_DN

IQGAP2 ARHGEF18 BRCA1 POLD3 ANAPC5 SNX1

2.58e-042001156M7143
CoexpressionGSE40225_WT_VS_RIP_B7X_DIABETIC_MOUSE_PANCREATIC_CD8_TCELL_DN

TICRR IQGAP2 NOD2 BRCA1 USO1 N4BP2

2.58e-042001156M9240
CoexpressionGSE40666_WT_VS_STAT1_KO_CD8_TCELL_UP

IPPK NRIP1 RIPOR2 ACTN1 BBS9 N4BP2

2.58e-042001156M9205
CoexpressionGSE2770_UNTREATED_VS_IL12_TREATED_ACT_CD4_TCELL_2H_UP

HDAC5 IQGAP2 TOB1 PKN2 ANAPC5 VBP1

2.58e-042001156M6090
CoexpressionGSE20198_IL12_VS_IL12_IL18_TREATED_ACT_CD4_TCELL_UP

CWH43 LDAF1 PPP1R7 ZNF277 CEP135 ZNF292

2.58e-042001156M7380
CoexpressionGSE34515_CD16_POS_MONOCYTE_VS_DC_UP

NRIP1 TNIP1 SFR1 RIF1 CDK5R1 YME1L1

2.58e-042001156M8765
CoexpressionGSE6674_ANTI_IGM_VS_CPG_STIM_BCELL_UP

NRIP1 RIPOR2 ARHGEF18 TNIP1 SFR1 TOB1

2.58e-042001156M6927
CoexpressionHE_LIM_SUN_FETAL_LUNG_C5_PRO_B_CELL

NRIP1 ATAD5 KIF20B RIF1 BRCA1 KIF15 N4BP2 AMOTL1 POLD3

2.64e-044781159M45785
CoexpressionMANNO_MIDBRAIN_NEUROTYPES_HNBGABA

DOCK4 RIPOR2 CTTNBP2 ERC1 ARFGEF3 TBC1D32 CDK5R1 LRRTM4 ANKRD12 SNX1 ZNF292

2.72e-0470311511M39070
CoexpressionGSE34217_MIR17_92_OVEREXPRESS_VS_WT_ACT_CD8_TCELL_DN

CWH43 HDAC5 PPP1R7 RNF220 RAPGEFL1

3.51e-041371155M8915
CoexpressionLAKE_ADULT_KIDNEY_C2_PODOCYTES

DOCK4 CTTNBP2 IQGAP2 ERC1 MACF1 ANKRD12

3.53e-042121156M39221
CoexpressionSENGUPTA_NASOPHARYNGEAL_CARCINOMA_WITH_LMP1_UP

CTTNBP2 SMCHD1 G2E3 RIF1 USO1 ZNF277 PKN2 CEP57

4.19e-044041158M19488
CoexpressionDODD_NASOPHARYNGEAL_CARCINOMA_UP

DOCK4 TICRR CDK12 TNIP3 LAMB1 KIF20B BLMH RIF1 GRPEL1 BRCA1 KIF15 DDX18 AMOTL1 CEP135 CCAR1 ANAPC5

4.30e-04140711516M14427
CoexpressionAtlasFacebaseRNAseq_e8.5_Hind Brain Neural Epithelium_top-relative-expression-ranked_2500_k-means-cluster#3

TPM4 ATAD5 CDK12 USP25 TSC22D2 KIF20B PPP1R7 RIF1 BRCA1 KIF15 N4BP2 CEP135 CEP57 RBM17

1.14e-0653211514Facebase_RNAseq_e8.5_Hind Brain Neural Epithelium_2500_K3
CoexpressionAtlasFacebaseRNAseq_e8.5_Floor Plate_top-relative-expression-ranked_2500_k-means-cluster#1

ATAD5 CDK12 USP25 TNIP1 KIF20B RIF1 KIF15 CEP135 CCAR1 CEP57 YME1L1 ZNF292 RBM17

1.59e-0646911513Facebase_RNAseq_e8.5_Floor Plate_2500_K1
CoexpressionAtlasfacebase_RNAseq_e10.5_Emin_LatNas_2500

TPM4 CERKL TICRR ATAD5 SMCHD1 G2E3 TLR7 CLIP1 KIF20B RIF1 BRCA1 KIF15 CEP135 CCAR1 ANP32E MACF1 CEP57 USP3 VBP1 DEUP1 DNMT3L ZNF292 RBM17

2.97e-06145911523facebase_RNAseq_e10.5_Emin_LatNas_2500
CoexpressionAtlasfacebase_RNAseq_e10.5_Emin_LatNas_2500_K3

TPM4 TICRR ATAD5 SMCHD1 G2E3 TLR7 CLIP1 KIF20B RIF1 BRCA1 KIF15 CEP135 CCAR1 ANP32E MACF1 CEP57 USP3 VBP1 DNMT3L ZNF292 RBM17

3.52e-06125711521facebase_RNAseq_e10.5_Emin_LatNas_2500_K3
CoexpressionAtlasfacebase_RNAseq_e10.5_Emin_MedNas_2500_K1

TICRR RIPOR2 IQGAP2 ATAD5 ERC1 G2E3 CLIP1 KIF20B RIF1 BRCA1 KIF15 LRRTM4 CEP135 CCAR1 ANP32E MACF1 USP3 DEUP1 ZNF292

4.02e-06106011519facebase_RNAseq_e10.5_Emin_MedNas_2500_K1
CoexpressionAtlasfacebase_RNAseq_e10.5_Emin_MedNas_2500

TICRR KRT78 RIPOR2 IQGAP2 ATAD5 ERC1 G2E3 CLIP1 KIF20B RIF1 BRCA1 KIF15 SLIT1 LRRTM4 CEP135 CCAR1 ANP32E MACF1 USP3 DEUP1 DNMT3L ZNF292

6.25e-06141411522facebase_RNAseq_e10.5_Emin_MedNas_2500
CoexpressionAtlasFacebaseRNAseq_e10.5_Neural Epithelium Flanking Eminence_top-relative-expression-ranked_1000_k-means-cluster#2

ATAD5 ADAM10 CLIP1 KIF20B RIF1 BRCA1 KIF15 CEP135 CCAR1 ZNF292

7.54e-0631111510Facebase_RNAseq_e10.5_Neural Epithelium Flanking Eminence_1000_K2
CoexpressionAtlasFacebaseRNAseq_e10.5_Neural Epithelium Flanking Eminence_top-relative-expression-ranked_500_k-means-cluster#3

ATAD5 CLIP1 KIF20B RIF1 BRCA1 KIF15 CEP135 CCAR1

1.00e-051921158Facebase_RNAseq_e10.5_Neural Epithelium Flanking Eminence_500_K3
CoexpressionAtlasfacebase_RNAseq_e10.5_MandArch_2500_K1

TPM4 TICRR ATAD5 SMCHD1 G2E3 KIF20B LRIG3 RIF1 BRCA1 KIF15 CEP135 CCAR1 ANP32E MACF1 CEP57 USP3 VBP1 ZNF292 RBM17

3.67e-05124111519facebase_RNAseq_e10.5_MandArch_2500_K1
CoexpressionAtlasFacebaseRNAseq_e10.5_Neural Epithelium Flanking Eminence_top-relative-expression-ranked_2500_k-means-cluster#5

ATAD5 ERC1 ARMC10 ACVR2A ADAM10 CLIP1 KIF20B RIF1 BRCA1 KIF15 CEP89 CEP135 CCAR1 ANAPC5 ZNF292

4.27e-0583111515Facebase_RNAseq_e10.5_Neural Epithelium Flanking Eminence_2500_K5
CoexpressionAtlasFacebaseRNAseq_e10.5_Neural Epithelium Overlying Lateral Eminence_top-relative-expression-ranked_2500_k-means-cluster#5

ATAD5 USP25 BBS9 KIF20B RIF1 BRCA1 KIF15 LRRTM2 CEP135 ANKRD12 POLD3 CEP57 HOMER2

5.46e-0565411513Facebase_RNAseq_e10.5_Neural Epithelium Overlying Lateral Eminence_2500_K5
CoexpressionAtlasDevelopingLowerUrinaryTract_e14.5_ Genital tubercle M_emap-6706_M-2fold-vs-F_top305_305

G2E3 ADAM10 CLIP1 OSBPL3 N4BP2 AMOTL1 POLD3 ZNF292

1.02e-042661158gudmap_developingLowerUrinaryTract_e14.5_ Genital tubercle M_250_M-vs-F-2X
CoexpressionAtlasfacebase_RNAseq_e10.5_MandArch_2500

TPM4 CERKL TICRR ATAD5 SMCHD1 G2E3 KIF20B LRIG3 RIF1 BRCA1 KIF15 CEP135 CCAR1 ANP32E MACF1 CEP57 USP3 VBP1 ZNF292 RBM17

1.13e-04146811520facebase_RNAseq_e10.5_MandArch_2500
CoexpressionAtlasFacebaseRNAseq_e10.5_Maxillary Arch_top-relative-expression-ranked_1000_k-means-cluster#3

TICRR ATAD5 CLIP1 KIF20B RIF1 CCAR1 MACF1 ARHGEF2 GOLGB1 ZNF292

1.22e-0443211510Facebase_RNAseq_e10.5_Maxillary Arch_1000_K3
CoexpressionAtlasFacebaseRNAseq_e10.5_Lateral Nasal Eminence_top-relative-expression-ranked_1000_k-means-cluster#5

ERC1 ARMC10 ACVR2A NPHP3 TOB1 CEP89 LRRTM4

2.04e-042211157Facebase_RNAseq_e10.5_Lateral Nasal Eminence_1000_K5
CoexpressionAtlasFacebaseRNAseq_e10.5_Neural Epithelium Overlying Lateral Eminence_top-relative-expression-ranked_500_k-means-cluster#5

ATAD5 KIF20B RIF1 BRCA1 KIF15 CEP135 HOMER2

2.74e-042321157Facebase_RNAseq_e10.5_Neural Epithelium Overlying Lateral Eminence_500_K5
CoexpressionAtlasFacebaseRNAseq_e10.5_Neural Epithelium Overlying Lateral Eminence_top-relative-expression-ranked_500

ATAD5 USP25 KIF20B RIF1 BRCA1 KIF15 CEP135 HOMER2 DEUP1 DNMT3L

3.52e-0449311510Facebase_RNAseq_e10.5_Neural Epithelium Overlying Lateral Eminence_500
CoexpressionAtlasFacebaseRNAseq_e10.5_Neural Epithelium Overlying Lateral Eminence_top-relative-expression-ranked_1000_k-means-cluster#2

ATAD5 USP25 ACVR2A BRCA1 KIF15 POLD3 CEP57 HOMER2

4.20e-043281158Facebase_RNAseq_e10.5_Neural Epithelium Overlying Lateral Eminence_1000_K2
CoexpressionAtlasB cells, proB.FrA.FL, CD19- IgM- CD43+ CD24intermediate AA4.1+ CD45R+ CD, Fetal Liver, avg-2

TICRR ATAD5 G2E3 TLR7 KIF20B PARP1 BRCA1 KIF15 ANP32E

4.88e-044221159GSM538355_500
CoexpressionAtlasDevelopingKidney_e15.5_ureter tip_flank cortic collct_emap-27752_k-means-cluster#5_top-relative-expression-ranked_1000

IQGAP2 CDK12 LAMB1 CLIP1 KIF20B RIF1 PKN2 POLD3

5.23e-043391158gudmap_developingKidney_e15.5_ureter tip_flank cortic collct_1000_k5
ToppCelldroplet-Bladder-nan|Bladder / Skin_Bladder_Kidney_Mammary_Gland - method, tissue, subtissue, age, lineage, cell ontology and free annotation

NRIP1 CDK12 SFR1 CLIP1 TRIP11 TOB1 PKN2 ANKRD12 GOLGB1

1.59e-091871169663991a8afe652e92363b64bcbd68c14d0307f0e
ToppCell(04)_Interm._basal>secr.-(2)_GFP_FOXI1|(04)_Interm._basal>secr. / shred by cell type by condition

NRIP1 IQGAP2 CLIP1 TRIP11 TOB1 ANKRD12 GOLGB1 ZNF292

5.37e-08199116853ca3861f9e00dab3f3fbefb0837857ee39ab084
ToppCell(09)_Interm._secr.>cil.-(2)_GFP_FOXI1|(09)_Interm._secr.>cil. / shred by cell type by condition

NRIP1 IQGAP2 CLIP1 TRIP11 TOB1 ANKRD12 GOLGB1 ZNF292

5.37e-081991168fc680f85ebd3bab4c72876a19a461b0afb5f51ce
ToppCell(08)_Brush+PNEC-(2)_GFP_FOXI1|(08)_Brush+PNEC / shred by cell type by condition

TPM4 NRIP1 TRIP11 TOB1 ANKRD12 GOLGB1 ZNF292

7.73e-081381167817e3f639604ea95adae01e8685ffaa2e0aff7a8
ToppCellfacs-Trachea-nan-3m-Myeloid-lymphocyte_of_B_lineage|Trachea / Lung_Trachea - method, tissue, subtissue, age, lineage, cell ontology and free annotation

CERKL ATAD5 ARHGEF18 ODAD2 KIF20B KIF15 ZNF292

1.87e-0715711670fecc14959c4c9efc19d5c06475a890e0a30f148
ToppCelldroplet-Limb_Muscle-MUSCLE|Limb_Muscle / Tongue_Heart_Limb_Muscle_Aorta_Diaphragm - method, tissue, subtissue, age, lineage, cell ontology and free annotation

CDK12 ERC1 TRIP11 MACF1 PKN2 ANKRD12 TET3

7.80e-071941167e3d63874111d1e8da3977329426e4dcf68d6de87
ToppCellPCW_13-14-Mesenchymal-Mesenchymal_cycling-mes_proliferating1_(3)|PCW_13-14 / Celltypes from embryonic and fetal-stage human lung

TICRR ATAD5 KIF20B PARP1 BRCA1 KIF15 POLD3

8.35e-071961167df366d76ea55f49e349d622effa57c1535df8400
ToppCell(00)_Basal-(2)_GFP_FOXI1|(00)_Basal / shred by cell type by condition

NRIP1 ACTN1 TRIP11 TOB1 ANKRD12 GOLGB1 ZNF292

9.24e-07199116719674e1eaeb51e4196d847cb62aa437c852951d3
ToppCell(05)_Secretory-(2)_GFP_FOXI1|(05)_Secretory / shred by cell type by condition

NRIP1 CLIP1 TRIP11 TOB1 ANKRD12 GOLGB1 ZNF292

9.24e-071991167d72d87e1e530ed894c0ad5e7b5b2b1d6b59fa098
ToppCellLPS_anti-TNF-Endothelial-Endothelial-FOXM1|LPS_anti-TNF / Treatment groups by lineage, cell group, cell type

CERKL TICRR ATAD5 KIF20B BRCA1 KIF15 ANP32E

9.24e-07199116798575fcce726589e93fbb4df1aab03e57cb56076
ToppCellFetal_brain-fetalBrain_Zhong_nature-GW08-Stem_cells|GW08 / Sample Type, Dataset, Time_group, and Cell type.

ATAD5 POLH KIF20B RIF1 BRCA1 KIF15 MOCS3

9.56e-072001167691b3edf7d8449556e8bf611662eb85772959f0f
ToppCellFetal_brain-fetalBrain_Zhong_nature-GW08-Stem_cells-Stem_cells|GW08 / Sample Type, Dataset, Time_group, and Cell type.

ATAD5 POLH KIF20B RIF1 BRCA1 KIF15 MOCS3

9.56e-07200116736a110aa91a791fdf1142e7869e8aa0d342402d0
ToppCellFetal_brain-organoid_Tanaka_cellReport-GW08-Stem_cells-Neuroepithelial_cell|GW08 / Sample Type, Dataset, Time_group, and Cell type.

ATAD5 POLH KIF20B RIF1 BRCA1 KIF15 MOCS3

9.56e-0720011674e077aa7faddcebdfc54667f8b3990704441005b
ToppCellCOVID-19|World / Disease, condition lineage and cell class

TPM4 IQGAP2 SMCHD1 MACF1 ANKRD12 YME1L1 GOLGB1

9.56e-0720011677dec470c379cd89f05a0f37c8628b21f136e52f0
ToppCellFetal_brain-organoid_Tanaka_cellReport-GW08-Stem_cells|GW08 / Sample Type, Dataset, Time_group, and Cell type.

ATAD5 POLH KIF20B RIF1 BRCA1 KIF15 MOCS3

9.56e-072001167d17ba4239e1fd702a3d757687110f0f2c6f91ef7
ToppCellPND14-Immune-Immune_Myeloid-DC-cDC2-cDC2_G2M|PND14 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif

IQGAP2 TNIP3 G2E3 KIF20B KIF15 ANP32E

5.24e-061681166b7cd33f5da4f37b9384fc3bd3ca01fbc790accfc
ToppCellPND14-Endothelial-Endothelial_blood-vessel-Microvascular_EC-EPC-EPC_prolif|PND14 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif

ATAD5 KIF20B RIF1 KIF15 CEP135 ANAPC5

5.99e-0617211662b6cd84c946b1e800caba452ae70145ea285fec1
ToppCellPBMC_fresh-frozen-Severe-critical_progression_d12-22_no-steroids-Lymphocytic-Lymphocytic_T-CD8-positive,_alpha-beta_T_cell-T_CD8_c05-ZNF683|Severe-critical_progression_d12-22_no-steroids / Compartment, severity and other cell annotations on 10x 3' data (130k)

IPPK IQGAP2 ODAD2 OSBPL3 ANGPTL7 AGAP1

6.84e-0617611665914e7635474e7cf24d446bdb1423bc0807ee9c6
ToppCellLPS-IL1RA-Endothelial-Endothelial-FOXM1|LPS-IL1RA / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2

TICRR ATAD5 DGKH KIF20B BRCA1 KIF15

7.77e-061801166334e2b1f6eb7d4ece20b1c7b02107863f913237f
ToppCell367C-Lymphocytic-NK_cells-Proliferating_NK_cell|NK_cells / Donor, Lineage, Cell class and subclass (all cells)

ATAD5 DGKH KIF20B KIF15 CEP135 CCAR1

8.54e-061831166a716b446c2bf5aa294b8f580aa845098fae76354
ToppCellrenal_cortex_nuclei-Renal_AKI_(acute_kidney_injury)-Epithelial-Proximal_tubule_epithelial_cell-kidney_proximal_tubule_epithelial_cell_cycling-Cycling_Proximal_Tubule_Epithelial_Cell_G2M|Renal_AKI_(acute_kidney_injury) / Celltypes from Cells and Nuclei per compartment and clinical group

TICRR ATAD5 POLH KIF20B BRCA1 KIF15

9.09e-06185116630e041d6f6e310d64809e9d6d93cd30052972f3b
ToppCellrenal_cortex_nuclei-Renal_AKI_(acute_kidney_injury)-Mesenchymal-Myocytic_interstitial_cell-Cycling_Myofibroblast-|Renal_AKI_(acute_kidney_injury) / Celltypes from Cells and Nuclei per compartment and clinical group

TICRR ATAD5 ACTN1 KIF20B BRCA1 KIF15

9.66e-061871166e41e39fd3791acf8ae5376cc5061e196d96868ae
ToppCellrenal_cortex_nuclei-Renal_AKI_(acute_kidney_injury)-Mesenchymal-Myocytic_interstitial_cell-Cycling_Myofibroblast|Renal_AKI_(acute_kidney_injury) / Celltypes from Cells and Nuclei per compartment and clinical group

TICRR ATAD5 ACTN1 KIF20B BRCA1 KIF15

9.66e-061871166cefa211ef224e803ea9467882e2ca74d0b1492f1
ToppCellrenal_cortex_nuclei-Renal_AKI_(acute_kidney_injury)-Epithelial-Proximal_tubule_epithelial_cell-kidney_proximal_tubule_epithelial_cell_cycling|Renal_AKI_(acute_kidney_injury) / Celltypes from Cells and Nuclei per compartment and clinical group

TICRR ATAD5 POLH KIF20B BRCA1 KIF15

9.66e-0618711669351fa87b69a951af85b10bf91fe9b1cce8c0517
ToppCellrenal_cortex_nuclei-Renal_AKI_(acute_kidney_injury)-Epithelial-Collecting_tubule_epithelial_cell-kidney_connecting_tubule_epithelial_cell_cycling|Renal_AKI_(acute_kidney_injury) / Celltypes from Cells and Nuclei per compartment and clinical group

TICRR ATAD5 POLH KIF20B BRCA1 KIF15

9.66e-061871166057569c9437219ecc396aa6e673b1178a2273837
ToppCellControl-Endothelial-Endothelial-FOXM1|Control / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2

TICRR ATAD5 KIF20B BRCA1 KIF15 ANP32E

1.03e-0518911661e1499b062d9c647c8f38b0c4e0d871d159be5dd
ToppCellBALF-PFMC-Severe-critical_progression_d12-22_with-steroid-Lymphocytic-Lymphocytic_T-mature_alpha-beta_T_cell-T_CD4_c03-ITGA4|Severe-critical_progression_d12-22_with-steroid / Compartment, severity and other cell annotations on 10x 3' data (130k)

CERKL IQGAP2 ACVR2A MACF1 GOLGB1 ZNF292

1.06e-05190116691ba66d4b56c59523485b17738e93f14bb00afa4
ToppCellpdx-Tumor_cells-T1|Tumor_cells / Sample and Cell Type and Tumor Cluster (all cells)

TICRR ATAD5 KIF20B BRCA1 KIF15 POLD3

1.06e-051901166d06ee5f89f1cec8db6897fe3b2a890a07cd3697b
ToppCell3'_v3-bone_marrow-Lymphocytic_T_CD4/8-lo-Cycling_T|bone_marrow / Manually curated celltypes from each tissue

LAMB4 ATAD5 KIF20B BRCA1 KIF15 ANP32E

1.09e-051911166210a0f1a71df2508cbfc73d6868a2122338b9a1c
ToppCellPCW_05-06-Mesenchymal-Mesenchymal_cycling-mes_proliferating2_(11)|PCW_05-06 / Celltypes from embryonic and fetal-stage human lung

TICRR POLH G2E3 KIF20B KIF15 CEP135

1.09e-0519111660ba5b112a82e489f5a21966f78a403a7436ce73b
ToppCelldroplet-Lung-30m-Hematologic-myeloid-classical_monocyte_proliferating-classical_monocyte_proliferating_l12-14|30m / method, tissue, age, lineage, sublineage, cell ontologies, cell type and subtype

G2E3 KIF20B ARFGEF3 BRCA1 KIF15 ANP32E

1.12e-05192116652d0aa51e3b6ab3608a5f40bdde9f8134b3afd94
ToppCellsevere-low-quality_cells|severe / Cohort 1 (10x PBMC) with disease condition, cell group and cell class

SMCHD1 DGKH TBC1D32 MACF1 ANKRD12 ZNF292

1.16e-0519311669337bc93e3904c7fc7c93c328518bcd6453b1e8c
ToppCell3'-Broncho-tracheal-Immune_Lymphocytic-Lymphocytic_T/NK-T_cell-T_cells_proliferating-T_cells_proliferating_L.1.1.3.1|3' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5

ATAD5 KIF20B PARP1 BRCA1 KIF15 ANP32E

1.16e-051931166b835d28de9daeec5213172c96f62b332cda53bb5
ToppCellPCW_13-14-Mesenchymal-Mesenchymal_cycling-mes_proliferating3_(7)|PCW_13-14 / Celltypes from embryonic and fetal-stage human lung

TICRR ATAD5 POLH KIF20B BRCA1 KIF15

1.19e-051941166f9070035553bc68106a9e0bdf4b507715a138aba
ToppCellmoderate-Epithelial-FOXN4+|Epithelial / Severity, Lineage and Cell class of Nasopharyngeal (NS) Samples from Patients and Controls

G2E3 ACTN1 KIF20B BRCA1 CEP135 DEUP1

1.19e-051941166dff3fb10372053951d41e0ccd41aac3ece6009bd
ToppCell3'-Broncho-tracheal-Immune_Lymphocytic-Lymphocytic_T/NK-T_cell-T_cells_proliferating|3' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5

ATAD5 KIF20B PARP1 BRCA1 KIF15 ANP32E

1.23e-05195116667670d16ddd5d5ab7bc2254df329f5a7b2581556
ToppCellPCW_10-12-Mesenchymal-Mesenchymal_cycling-mes_proliferating1_(3)|PCW_10-12 / Celltypes from embryonic and fetal-stage human lung

ATAD5 KIF20B PARP1 BRCA1 KIF15 POLD3

1.23e-051951166cec7df321f372d05c94f97d6bb18891a5cc3dec3
ToppCell3'-Broncho-tracheal-Immune_Lymphocytic-Lymphocytic_T/NK-T_cell|3' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5

ATAD5 KIF20B PARP1 BRCA1 KIF15 ANP32E

1.23e-05195116623dc2f8a3a038195a31feee7e3a51094a7a7c23e
ToppCellPCW_07-8.5-Mesenchymal-Mesenchymal_cycling-mes_proliferating1_(3)|PCW_07-8.5 / Celltypes from embryonic and fetal-stage human lung

TICRR ATAD5 KIF20B BRCA1 KIF15 POLD3

1.23e-051951166b65463a804fed2d9a3be9e528ca8b9c98469bc86
ToppCellPCW_05-06-Mesenchymal-Mesenchymal_cycling|PCW_05-06 / Celltypes from embryonic and fetal-stage human lung

TICRR ATAD5 KIF20B BRCA1 KIF15 ANP32E

1.23e-051951166926eb3fc5d028be936885bea0654a77db3107234
ToppCell(1)_T_cells-(1)_T_CD4_naive|(1)_T_cells / Spleen cell shreds - cell class (v1) and cell subclass (v1)

RIPOR2 ERC1 SMCHD1 ACTN1 TRIP11 N4BP2

1.23e-051951166d3fa551bc6f5ee5890af1040415e61ecd5d46201
ToppCelldroplet-Tongue-TONGUE|Tongue / Tongue_Heart_Limb_Muscle_Aorta_Diaphragm - method, tissue, subtissue, age, lineage, cell ontology and free annotation

CWH43 USP25 AMOTL1 ANKRD12 TET3 RAPGEFL1

1.26e-05196116644a30b1a5f3d8c845e5f3bd17d8102a7449f555b
ToppCelldroplet-Tongue-TONGUE-1m|Tongue / Tongue_Heart_Limb_Muscle_Aorta_Diaphragm - method, tissue, subtissue, age, lineage, cell ontology and free annotation

CWH43 USP25 AMOTL1 ANKRD12 TET3 RAPGEFL1

1.26e-0519611669935bdb10789e8cfc922dca526ca3bf8317fe270
ToppCelldroplet-Tongue-TONGUE-1m-Epithelial|Tongue / Tongue_Heart_Limb_Muscle_Aorta_Diaphragm - method, tissue, subtissue, age, lineage, cell ontology and free annotation

CWH43 USP25 AMOTL1 ANKRD12 TET3 RAPGEFL1

1.26e-051961166a85f5f1e6acc798e9e02b1a21e0ffe87a323c333
ToppCellPCW_07-8.5-Mesenchymal-Mesenchymal_cycling-mes_proliferating3_(7)|PCW_07-8.5 / Celltypes from embryonic and fetal-stage human lung

TICRR ATAD5 POLH KIF20B BRCA1 KIF15

1.26e-0519611661964c5003a0cb84539850a7cfe3bbb0e23a61d2d
ToppCellPCW_07-8.5-Mesenchymal-Mesenchymal_cycling|PCW_07-8.5 / Celltypes from embryonic and fetal-stage human lung

TICRR ATAD5 KIF20B BRCA1 KIF15 ANP32E

1.26e-05196116673f951f7712e0aa3323676b9a4b7944d21d347c4
ToppCellnormal_Lung-T/NK_cells-Undetermined|normal_Lung / Location, Cell class and cell subclass

TICRR ATAD5 KIF20B BRCA1 KIF15 ANP32E

1.34e-051981166c65cdb54409087014125a76627e5efb5fe8dabc9
ToppCell(10)_Ciliated-(2)_GFP_FOXI1|(10)_Ciliated / shred by cell type by condition

NRIP1 CLIP1 TRIP11 TOB1 ANKRD12 GOLGB1

1.38e-05199116661b1ed2db71b96157b92b7535d1955a4033098da
ToppCellCOVID-19-Lymphoid-Proliferating_CD4_T_cells|Lymphoid / Condition, Lineage and Cell class

ATAD5 KIF20B BRCA1 KIF15 ANP32E POLD3

1.38e-0519911662e9ee10a069afca5dbd9f0863cf90a66db1a6ffb
ToppCell(03)_KRT6B+-(2)_GFP_FOXI1|(03)_KRT6B+ / shred by cell type by condition

USP25 CLIP1 TRIP11 ANKRD12 GOLGB1 ZNF292

1.38e-051991166c425e7975f492ed5cfcca022248adb627e1d27d4
ToppCellLPS_IL1RA-Endothelial-Endothelial-FOXM1|LPS_IL1RA / Treatment groups by lineage, cell group, cell type

TICRR ATAD5 G2E3 KIF20B BRCA1 KIF15

1.38e-051991166be2276c9a1994579ba1d2998b49bf549c1324d44
ToppCellLPS_IL1RA_TNF-Endothelial-Endothelial-FOXM1|LPS_IL1RA_TNF / Treatment groups by lineage, cell group, cell type

TICRR ATAD5 KIF20B BRCA1 KIF15 ANP32E

1.41e-0520011664cfe08878a6981bf7b3567f9e82192d8f060ddde
ToppCellBrain_organoid-organoid_Tanaka_cellReport-2m-Stem_cells-Neuroepithelial_cell|2m / Sample Type, Dataset, Time_group, and Cell type.

ATAD5 KIF20B BRCA1 KIF15 CEP135 ANP32E

1.41e-0520011660d9b8d51a7630e70e60c76c763ff82df4c559152
ToppCellControl_saline-Endothelial-Endothelial-FOXM1|Control_saline / Treatment groups by lineage, cell group, cell type

TICRR ATAD5 KIF20B BRCA1 KIF15 ANP32E

1.41e-0520011669bbc7b5561151f6ff65f40b3226271def732e5d9
ToppCellBrain_organoid-organoid_Tanaka_cellReport-2m-Stem_cells|2m / Sample Type, Dataset, Time_group, and Cell type.

ATAD5 KIF20B BRCA1 KIF15 CEP135 ANP32E

1.41e-0520011660675f580ccef705875854247bbfd4ee2bcf126a1
ToppCellmild|World / Cohort 1 (10x PBMC) with disease condition, cell group and cell class

SMCHD1 MACF1 PKN2 ANKRD12 GOLGB1 ZNF292

1.41e-05200116612f1685ce8f218433068e090c9d839cd5a1910bf
ToppCell3'-GW_trimst-1.5-SmallIntestine-Mesenchymal-immature_mesenchymal_cell-cycling_stromal|GW_trimst-1.5 / Celltypes from developing, pediatric, Crohn's, & adult GI tract

ATAD5 KIF20B BRCA1 KIF15 ANP32E POLD3

1.41e-05200116638665128b54f4a81b53c961427aed67bf4e2510b
ToppCellTCGA-Cervix-Primary_Tumor-Cervical_Carcinoma-Keratinizing_Cervical_Squamous_Cell_Carcinoma-3|TCGA-Cervix / Sample_Type by Project: Shred V9

IPPK NRIP1 KRT78 TSC22D2 CLIP1

5.53e-051561165ffb9249a115ce31f50b99a7a3d40bf48b9d7f2b0
ToppCell10x5'-bone_marrow-Lymphocytic_T_CD4-T_CD4/CD8|bone_marrow / Manually curated celltypes from each tissue

SMCHD1 DGKH LRRTM4 MACF1 ANKRD12

5.53e-0515611651545169694f686d28648a68b552c2ae606599d66
ToppCellPND28-Immune-Immune_Lymphocytic_T/NK-Lymphocytic_T-CD8_T-CD8_T_prolif|PND28 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif

KIF20B CDK5R1 KIF15 OSBPL3 USP3

7.01e-0516411655621c2e3fae84d5a2e4f1595e454bcb3a2b3f93c
ToppCellPND03-Immune-Immune_Lymphocytic_T/NK-Lymphocytic_ILC-NK-ILC-ILC_G2M|PND03 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif

TICRR IQGAP2 KIF20B KIF15 OSBPL3

7.21e-05165116526c750f10f6401752e2e63d91dc844c81b29d735
ToppCellrenal_cortex_nuclei-Renal_AKI_(acute_kidney_injury)-Epithelial-Collecting_tubule_epithelial_cell-kidney_connecting_tubule_epithelial_cell_cycling-Cycling_Connecting_Tubule_Cell_S-high|Renal_AKI_(acute_kidney_injury) / Celltypes from Cells and Nuclei per compartment and clinical group

TICRR ATAD5 BRCA1 KIF15 DCLRE1A

7.63e-051671165108ae6221c6edc63c0ec42c42471b3a15a594043
ToppCellPND07-Immune-Immune_Lymphocytic_T/NK-Lymphocytic_T-CD4_T-CD4_T_G2M|PND07 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif

TICRR ARHGEF18 KIF20B KIF15 CEP57

7.63e-051671165754e6412d3b9cc0b126e59593df2f5956b4712ef
ToppCellrenal_cortex_nuclei-Hypertensive_with+without-CKD-Epithelial-Proximal_tubule_epithelial_cell-kidney_proximal_tubule_epithelial_cell_cycling-Cycling_Proximal_Tubule_Epithelial_Cell_G2M|Hypertensive_with+without-CKD / Celltypes from Cells and Nuclei per compartment and clinical group

ATAD5 POLH KIF20B BRCA1 KIF15

8.07e-051691165b253a4a50c06d36228fcd5d856c57202cbac158f
ToppCellrenal_cortex_nuclei-Adult_normal_reference-Epithelial-Proximal_tubule_epithelial_cell-kidney_proximal_tubule_epithelial_cell_cycling|Adult_normal_reference / Celltypes from Cells and Nuclei per compartment and clinical group

TICRR ATAD5 KIF20B BRCA1 KIF15

9.26e-05174116584da9faff088d05233183b425385beb054c92d1b
ToppCellThalamus-Neuronal-Excitatory|Thalamus / BrainAtlas - Mouse McCarroll V32

CTTNBP2 CDK5R1 OSBPL3 AMOTL1 HOMER2

9.77e-051761165d2bbf13d21fb7582d7e5f90cd61a4ebe1cfccd66
ToppCellPND10-Immune-Immune_Myeloid-Monocytic-Macrophage-iMON-iMON_G2M|PND10 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif

TNIP3 TNIP1 KIF15 ANP32E POLD3

9.77e-05176116590f8bb11f339f67f08692a0c33dd420f5cda2861
ToppCellPND01-Endothelial-Endothelial_blood-vessel-Microvascular_EC-EPC-EPC_G2M|PND01 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif

G2E3 KIF20B KIF15 CEP89 ANP32E

9.77e-0517611658385435074cc5235b7af7424974f609388fc2cff
ToppCellPND14-Endothelial-Endothelial_blood-vessel-Microvascular_EC-EPC|PND14 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif

G2E3 KIF20B BRCA1 KIF15 ANP32E

1.06e-04179116554191c00b29f53b520cd3243b5791daa4a2c72d7
ToppCellPND14-Endothelial-Endothelial_blood-vessel-Microvascular_EC-EPC-EPC_G2M|PND14 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif

G2E3 KIF20B BRCA1 KIF15 ANP32E

1.09e-0418011655e1680088065be14447d5d5465f91f7edd071a1e
ToppCell10x5'-Liver-Lymphocytic_T_CD4-T_CD4/CD8|Liver / Manually curated celltypes from each tissue

SMCHD1 DGKH OSBPL3 MACF1 ANKRD12

1.11e-041811165f2315414e714ac86211546a935660c4be6e85f1b
ToppCellrenal_cortex_nuclei-Renal_AKI_(acute_kidney_injury)-Epithelial-Collecting_tubule_epithelial_cell-kidney_connecting_tubule_epithelial_cell_cycling-Cycling_Connecting_Tubule_Cell_G2M|Renal_AKI_(acute_kidney_injury) / Celltypes from Cells and Nuclei per compartment and clinical group

TICRR POLH G2E3 KIF20B KIF15

1.14e-041821165336cd05e46a741185ce3c59ee67a4b07fa6a5101
ToppCelldroplet-Marrow-nan-3m-Myeloid-promonocyte|Marrow / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation

TPM4 IQGAP2 SMCHD1 KCNK12 KIF15

1.14e-041821165bc8d621be57f76d718d9b0f11e023b0f4dcb668d
ToppCellCalu_3-infected|Calu_3 / Cell line, Condition and Strain

CDK12 SMCHD1 RIF1 PKN2 ZNF292

1.17e-0418311658f7f5000645f24f20a8d7700c4df1f8953a1780b
ToppCellBALF-PFMC-Severe-critical_progression_d12-22_with-steroid-Lymphocytic-Lymphocytic_T-mature_alpha-beta_T_cell-T_CD4_c02-AQP3|Severe-critical_progression_d12-22_with-steroid / Compartment, severity and other cell annotations on 10x 3' data (130k)

RIPOR2 ACVR2A PPP1R7 CDK5R1 ZNF292

1.17e-041831165317b756378a9efd8ecb754acf7273f83f996e106
ToppCellDividing_Macrophages-IPF_01|World / lung cells shred on cell class, cell subclass, sample id

TICRR ATAD5 KIF20B BRCA1 KIF15

1.20e-041841165f15ce786d25c6546804a6d1efcc2ad645f2ef54e
ToppCell3'-Broncho-tracheal-Immune_Lymphocytic-Lymphocytic_T/NK-T_cell-T_cells_proliferating-T_cells_proliferating_L.1.1.3.0|3' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5

TICRR KIF20B BRCA1 KIF15 ANP32E

1.20e-0418411658260e688ec42a1374727bc85dceb7edd19a8b662
ToppCellPND10-Immune-Immune_Lymphocytic_T/NK-Lymphocytic_B-B-B_G2M|PND10 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif

RIPOR2 KIF20B PARP1 KIF15 ANP32E

1.20e-0418411658f40093de5bb978f046d66e8f05f333686a009a4
ToppCellCV-Moderate-7|Moderate / Virus stimulation, Condition and Cluster

SMCHD1 ADAM10 OSBPL3 MACF1 ZNF292

1.23e-041851165a6c9203ce6c2892a4a369c9bcfb85720f01cbb3f
ToppCelldroplet-Marrow-nan-3m-Myeloid|Marrow / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation

SMCHD1 CLIP1 TRIP11 PARP1 MACF1

1.23e-0418511657adfa929930cfa795cbfbd9f1a0b439e08aa765d
ToppCell10x_3'_v3-spleen_(10x_3'_v3)-lymphocytic-T_lymphocytic-CD8-positive,_alpha-beta_T_cell|spleen_(10x_3'_v3) / Per Platform+tissue_group, by lineage_subgroup, cell_group, cell_type

ATAD5 KIF20B BRCA1 KIF15 ANP32E

1.23e-0418511659d424a8608b339dd6129c58d87626678d4ec4af7
ToppCell10x5'-bone_marrow-Myeloid_Dendritic-Cycling_Dendritic|bone_marrow / Manually curated celltypes from each tissue

TICRR ATAD5 ODAD2 BRCA1 KIF15

1.23e-0418511659d3168c7f0b1d739f78b368969cf5c77ce202b97
ToppCellfacs-Skin-Telogen-3m-Epithelial-actively_dividing_stem_cell|Skin / Skin_Bladder_Kidney_Mammary_Gland - method, tissue, subtissue, age, lineage, cell ontology and free annotation

TICRR G2E3 KIF20B BRCA1 KIF15

1.27e-0418611659feef5936985e936b3d88f9d1bb012abb6468570
ToppCellCV-Moderate-7|CV / Virus stimulation, Condition and Cluster

SMCHD1 ADAM10 OSBPL3 MACF1 ZNF292

1.27e-0418611658571956890fc9894d766ba294a28e376b4aba428
ToppCellfacs-Skin-Telogen-3m-Epithelial-keratinocyte_stem_cell|Skin / Skin_Bladder_Kidney_Mammary_Gland - method, tissue, subtissue, age, lineage, cell ontology and free annotation

TICRR G2E3 KIF20B BRCA1 KIF15

1.27e-04186116589f5b06bc56674af304912d481ac697c7c870904
ToppCell10x5'-GI_small-bowel-Lymphocytic_T_CD4-T_CD4/CD8|GI_small-bowel / Manually curated celltypes from each tissue

SMCHD1 DGKH MACF1 ANKRD12 GOLGB1

1.33e-041881165ab9b725d6e0cdab8e9ddda6dee09e14730e9a578
ToppCell10x_3'_v2v3-Neoplastic-Stem-like-NPC-like-NPC-like_neural-C|10x_3'_v2v3 / Platform, Oncotype, Lineage, Cell_class, celltype (level4), mutation group

CTTNBP2 AARSD1 LRRTM4 LRRTM2 ZNF292

1.33e-041881165e239bcdbd210a398a5850cb6fbf171d402f45a4f
ToppCell367C-Lymphocytic-CD4_T-cell-Proliferating_T_cell|CD4_T-cell / Donor, Lineage, Cell class and subclass (all cells)

ATAD5 SREBF1 BRCA1 KIF15 POLD3

1.33e-041881165f5102e8d95506c25c675094b86162a6a50087b64
ToppCellfacs-Skin-Anagen-3m-Epithelial-actively_dividing_stem_cell|Skin / Skin_Bladder_Kidney_Mammary_Gland - method, tissue, subtissue, age, lineage, cell ontology and free annotation

TICRR G2E3 KIF20B BRCA1 KIF15

1.36e-041891165bfa3ed1360991a3e32fad133017c413f8adc1eba
ToppCellfacs-Skin-Anagen-3m-Epithelial-keratinocyte_stem_cell|Skin / Skin_Bladder_Kidney_Mammary_Gland - method, tissue, subtissue, age, lineage, cell ontology and free annotation

TICRR G2E3 KIF20B BRCA1 KIF15

1.36e-04189116596f10c63656e446b4bb712f012e91ae986f8c2d0
ToppCellnormal_Pleural_Fluid-T/NK_cells-Undetermined|normal_Pleural_Fluid / Location, Cell class and cell subclass

ATAD5 KIF20B BRCA1 KIF15 ANP32E

1.40e-041901165165c61443ff0c8efbdad3b052bb00f46d81c5203
ToppCell5'-GW_trimst-1.5-LargeIntestine-Mesenchymal-immature_mesenchymal_cell-cycling_stromal|GW_trimst-1.5 / Celltypes from developing, pediatric, Crohn's, & adult GI tract

TICRR G2E3 KIF20B KIF15 ANP32E

1.40e-041901165cd37ccd30c27cf65eda0a9165f35b7672f5acaf6
ToppCelldroplet-Lung-21m-Hematologic-lymphocytic-Proliferating_T_cell-proliferating_T|21m / method, tissue, age, lineage, sublineage, cell ontologies, cell type and subtype

TICRR ATAD5 KIF20B BRCA1 KIF15

1.43e-04191116515dbc5a03bfab8931c0fd385b0f25874736ae874
ToppCelldroplet-Large_Intestine-COLON_PROXIMAL|Large_Intestine / Large_Intestine_Pancreas_Liver - method, tissue, subtissue, age, lineage, cell ontology and free annotation

NRIP1 ADAM10 TRIP11 PKN2 GOLGB1

1.43e-04191116560c986d2dcbc19d9338c03da6cb5e1d92fd48f8e
ToppCellrenal_medulla_nuclei-Renal_AKI_(acute_kidney_injury)-Epithelial-Intermediate_tubule_epithelial_cell|Renal_AKI_(acute_kidney_injury) / Celltypes from Cells and Nuclei per compartment and clinical group

RIPOR2 CTTNBP2 LAMB1 DGKH ADAM10

1.43e-041911165d0e9afe7b6334dd515d3e68892efdc76347a55e5
ToppCellSmart-start-Cell-Wel_seq-Non-neoplastic-Lymphoid-CD4/CD8-Prolif_T-G|Smart-start-Cell-Wel_seq / Platform, Oncotype, Lineage, Cell_class, celltype (level4), mutation group

ATAD5 SMCHD1 KIF20B KIF15 ANP32E

1.43e-041911165912e2d10d3423aa7f708fcf2b11da1845f12d7d3
ToppCellCD8+_Memory_T_cell-CV-7|CD8+_Memory_T_cell / cell class, Virus stimulation and cluster

SMCHD1 ADAM10 OSBPL3 MACF1 ZNF292

1.43e-0419111659454f642c3621370fa23640b631301346b300950
ToppCelldroplet-Lung-21m-Hematologic-lymphocytic-Proliferating_T_cell|21m / method, tissue, age, lineage, sublineage, cell ontologies, cell type and subtype

TICRR ATAD5 KIF20B BRCA1 KIF15

1.43e-04191116545c15f5ce4a207ac944bed65d45f06c1657d1a6d
ToppCellSmart-start-Cell-Wel_seq-Non-neoplastic-Lymphoid-CD4/CD8-Prolif_T|Smart-start-Cell-Wel_seq / Platform, Oncotype, Lineage, Cell_class, celltype (level4), mutation group

ATAD5 SMCHD1 KIF20B KIF15 ANP32E

1.43e-04191116577a2746b6d9c53b08d4405411c16fcc5a6c734ce
ToppCelldroplet-Large_Intestine-COLON_PROXIMAL-30m|Large_Intestine / Large_Intestine_Pancreas_Liver - method, tissue, subtissue, age, lineage, cell ontology and free annotation

NRIP1 ADAM10 TRIP11 PKN2 GOLGB1

1.43e-041911165973117730d6ba5f127e7a0bfabfd0ff2ca7ac131
ComputationalGenes upregulated in subsets of cells of a given type within various tumors

ATAD5 SMCHD1 TRIP11 RIF1 MACF1 GOLGB1

7.13e-0750696GAVISH_3CA_MALIGNANT_METAPROGRAM_4_CHROMATIN
ComputationalGenes upregulated in subsets of cells of a given type within various tumors

SMCHD1 MACF1 GOLGB1 ZNF292

2.65e-0449694GAVISH_3CA_METAPROGRAM_CD8_T_CELLS_CHROMATIN
ComputationalGenes upregulated in subsets of cells of a given type within various tumors

LAMB1 RIF1 MACF1 GOLGB1

2.87e-0450694GAVISH_3CA_METAPROGRAM_FIBROBLASTS_CAF_4
DrugClorgyline

NRIP1 SMCHD1 CLIP1 TRIP11 CEP135 ANKRD12 GOLGB1 ZNF292

2.40e-061681168ctd:D003010
DiseaseMalignant neoplasm of breast

TPM4 NRIP1 POLH TNIP1 ADAM10 CLIP1 PARP1 RIF1 BRCA1 ZNF277 N4BP2 DDX18 ZNF432 MACF1 ANAPC5 GOLGB1

2.70e-06107411116C0006142
DiseaseAlzheimer disease, diastolic blood pressure

DOCK4 ADAM10

4.20e-0531112EFO_0006336, MONDO_0004975
DiseaseGrowth abnormality

TET3 ZNF292

4.20e-0531112C0262361
Diseaseresponse to silica exposure, pneumoconiosis

LAMB4 LAMB1

1.39e-0451112EFO_0005853, MONDO_0015926
DiseaseMacrothrombocytopenia

TPM4 ACTN1

1.39e-0451112C2751260
Diseaseeosinophil count

CPA4 NRIP1 SREBF1 ARHGEF18 TNIP1 DGKH ACVR2A GRPEL1 BRCA1 PKN2 USP3 TET3 LRRC36 DNMT3L RAPGEFL1 ZNF292

1.42e-04148811116EFO_0004842
Diseasecortical surface area measurement

CPA4 TICRR CTTNBP2 IQGAP2 SREBF1 TSC22D2 ACVR2A BBS9 KIF20B GATAD2B CCAR1 MACF1 PKN2 POLD3 AGAP1

1.57e-04134511115EFO_0010736
DiseaseLissencephaly

LAMB1 MACF1

2.08e-0461112C0266463
Diseasemean corpuscular hemoglobin concentration

TICRR IQGAP2 CDK12 RIF1 NPHP3 MACF1 PKN2 ANKRD12 FKBP8 CEP57 GOLGB1 AGAP1 XPO7

2.67e-04110511113EFO_0004528
Diseasecortical thickness

CPA4 RIPOR2 CTTNBP2 SREBF1 TSC22D2 ADAM10 BBS9 KIF20B GATAD2B CCAR1 MACF1 HOMER2 AGAP1

2.86e-04111311113EFO_0004840
DiseaseAutosomal dominant macrothrombocytopenia

TPM4 ACTN1

2.91e-0471112C4304021
Diseaseautoimmune disease (is_implicated_in)

NOD2 PARP1

3.87e-0481112DOID:417 (is_implicated_in)
Diseasemiddle cerebral artery infarction (biomarker_via_orthology)

HDAC5 NOD2 PARP1 GRPEL1

4.28e-04931114DOID:3525 (biomarker_via_orthology)
DiseaseAbnormality of the face

TET3 ZNF292

4.96e-0491112C4025871
Diseaseindoleacetate measurement

LRRTM4 AGAP1

6.19e-04101112EFO_0021015
DiseaseBardet-Biedl syndrome (implicated_via_orthology)

BBS9 TBC1D32

7.54e-04111112DOID:1935 (implicated_via_orthology)
Diseasemethionine sulfone measurement

CDK12 CEP89

9.03e-04121112EFO_0800072
Diseasedisease recurrence, colon carcinoma

AMOTL1 LRRTM4 MACF1

9.46e-04511113EFO_0004952, EFO_1001950
DiseaseDermatitis

NOD2 PARP1

1.63e-03161112C0011603
Diseaserespiratory symptom change measurement, response to placebo

BBS9 PKN2

1.84e-03171112EFO_0008344, EFO_0010068
Diseaseperinatal necrotizing enterocolitis (biomarker_via_orthology)

TLR7 PARP1

1.84e-03171112DOID:8677 (biomarker_via_orthology)
DiseaseSystemic Scleroderma

HDAC5 TNIP1

2.30e-03191112C0036421
Diseaseevent free survival time, urinary bladder cancer

G2E3 LRRC31

2.30e-03191112EFO_0000482, MONDO_0001187
Diseaseleprosy, Crohn's disease

NOD2 LACC1

2.55e-03201112EFO_0000384, EFO_0001054
Diseasebody weight

IPPK CWH43 ATAD5 SMCHD1 DGKH TSC22D2 CLIP1 SLIT1 POLD3 AGAP1 RAPGEFL1 XPO7

2.83e-03126111112EFO_0004338
DiseaseSensorineural Hearing Loss (disorder)

RIPOR2 YME1L1

3.37e-03231112C0018784

Protein segments in the cluster

PeptideGeneStartEntry
TKLNLQKSNRNSLLA

USP26

776

Q9BXU7
NDDLLKVSSLCNNNK

ATAD5

546

Q96QE3
SSASFDLKQQLLLNK

ARHGEF18

1261

Q6ZSZ5
KCSNILLNNSGQIKL

CDK12

861

Q9NYV4
KCQLEINFNTLQTKL

ACTN1

331

P12814
LSNCRKLKKLNLNAS

AMN1

81

Q8IY45
QILASLQSCESSKNK

AGAP1

586

Q9UPQ3
LNNENLKKSLSCANL

CDK5R1

81

Q15078
EELSLLAQNKQSSKL

DNMT3L

341

Q9UJW3
KQQQTSIKSSLLCLQ

TBC1D32

1046

Q96NH3
EKTILNLENSNKSLS

CCAR1

1066

Q8IX12
KLNNNKFSLCSIRNI

ADAM10

426

O14672
AALLKNNTALQSVSL

ARHGEF2

96

Q92974
KNVLLKNNLTACIAD

ACVR2A

326

P27037
QTSNNCKNSLTELLL

ANKRD18B

986

A2A2Z9
SQLLAAENKCNLLEK

CEP57

131

Q86XR8
STKILQKNNLNLLRD

AARSD1

281

Q9BTE6
KLQQALTQLQSACEK

AMOTL1

611

Q8IY63
NLKNLKSLDLFNCEI

ANP32E

111

Q9BTT0
SLLQAKEKTQQSLAA

ANKRD12

1801

Q6UB98
SLDAQQKLLSEKCNQ

DEUP1

166

Q05D60
NQSIKEKALNALNNL

ARMC10

151

Q8N2F6
AQLNKLTQLATKCLE

ERVK-16

51

P61578
LNDSSQQLQDSLRKK

ERC1

821

Q8IUD2
ALKSLLQEAQNNLKI

IPPK

196

Q9H8X2
CSTNDLKELLIFNKQ

PARP1

256

P09874
FTLLKSLSLNNNKLT

LRRC57

61

Q8N9N7
ICNLKKLETLSLNNN

LRRC57

81

Q8N9N7
VANLSSLLSELNKKQ

ANGPTL7

56

O43827
LSQQASLLKNDETKA

ANAPC5

216

Q9UJX4
NNKLNSLDSKILNSL

LRRTM2

286

O43300
CLFANTEKLKAQLLQ

KIF15

576

Q9NS87
KLNLDSNKLTNISQE

LRRTM4

281

Q86VH4
KNLCLNKSSLDFSAN

LRIG3

1011

Q6UXM1
LLCTATKQKNSGQNL

GRPEL1

26

Q9HAV7
LASLKTLDLSNNQLS

LRRC47

201

Q8N1G4
NDKLKIALTQSAANV

HOMER2

166

Q9NSB8
KLNDQANTLTDLAKT

KCNN1

446

Q92952
SGKTNLCQLSLSKLN

FSIP2

1986

Q5CZC0
QALLEKNLSTATKNL

VBP1

141

P61758
ASNKVSLALLQKQLS

KCNK12

376

Q9HB15
LQKKLSLLIDSFQNN

LDAF1

16

Q96B96
QVACLNQELAQLKKL

LRRC36

656

Q1X8D7
LLSNLQELDLSANKK

LRRC31

336

Q6UY01
QQELSLSEKKNLTLS

KIF20B

916

Q96Q89
LKKQNASLQAAITDA

KRT78

346

Q8N1N4
SQKNCHQTLLKTLNA

LACC1

16

Q8IV20
KSFNVLKQLLLSENC

NRIP1

931

P48552
AKTLLAQANSKLQLL

LAMB1

1726

P07942
ANSQAAAKLALRKQL

GATAD2B

346

Q8WXI9
SLCNLVNENTLKAIK

DDX18

181

Q9NVP1
KCSVLNEKLEQLLQA

DGKH

546

Q86XP1
LKNLSLKLDDLSTCN

OSBP2

306

Q969R2
KSSKEQALNLNSQLN

BBS9

786

Q3SYG4
LNCEEKLTLAKNTLQ

MACF1

441

Q9UPN3
SQACSNKNLEKLRAQ

MACF1

5046

Q9UPN3
KNDNLLKALQLNELT

POTEE

686

Q6S8J3
CLSKNTEENLLSLKN

BRCA1

1251

P38398
LSLKNSLNDCSNQVI

BRCA1

1261

P38398
VNLSNKNEKLCQELT

CEP135

306

Q66GS9
SKNLSLNSQALKENL

G2E3

431

Q7L622
QLLQLKVKCLNNLAA

FKBP8

266

Q14318
LENKNQQLKTLISQC

DOCK4

1476

Q8N1I0
QLNCNRNASLSKQKS

CTTNBP2

1491

Q8WZ74
SKQKSLENDLSLTLN

CTTNBP2

1501

Q8WZ74
SLLLEKNSLTEQNKA

CEP89

551

Q96ST8
AALSLKLLKNQEADQ

ARFGEF3

656

Q5TH69
EISKLSQLVNSNNLK

CPA4

36

Q9UI42
NKLKNSTLDLINLSE

CERKL

131

Q49MI3
LNSEKVAALIQKLNS

BLMH

6

Q13867
KAANILLNLDKTLNQ

LAMB4

1561

A4D0S4
IRKLSSENLNAKNNT

DCLRE1A

486

Q6PJP8
NSVAITAKLLQQKLN

HDAC5

846

Q9UQL6
LVNNKISKIENLSNL

PPP1R7

171

Q15435
NDSQKAVKILQSLSA

MOCS3

416

O95396
LQLKLTKANENASFL

CLIP1

961

P30622
LKQAAAQKSQQLSAL

CLIP1

1161

P30622
KNALSSALAQNTDLK

OSBPL3

381

Q9H4L5
NLDLLLQTKNSSKVL

CWH43

371

Q9H720
DNLNKLKNLCSKTIG

SARS1

51

P49591
DCLILLQNLLKNNNS

USO1

231

O60763
VCKLDSVNKDLNSQL

SMCHD1

1916

A6NHR9
SLLGQLQNITKKENC

TCP11X2

311

Q5H9J9
ALLKSLSSNDQLSQL

TSC22D2

731

O75157
ALIAVNLKNSLKQLT

SLC26A9

436

Q7LBE3
QSLNNLAALCNEKKQ

NPHP3

1136

Q7Z494
NALELLSKLNDTIKN

RIF1

96

Q5UIP0
AELAKLQQTLNALNK

IQGAP2

1416

Q13576
LLSKLANTNNNKLRH

ODAD2

926

Q5T2S8
FLNNSTSLLKCQSDK

SIMC1

746

Q8NDZ2
KNDNLLKALQLNELT

POTEI

686

P0CG38
SLLLKQKQLNNSSVS

POLH

536

Q9Y253
QLAQLPSSKNSLLKD

RNF220

246

Q5VTB9
ILKSNLQNCSKFSAI

POLD3

121

Q15054
CSTSNNRLKALQKQL

PKN2

131

Q16513
ENTNLKNTLKNLNVC

SFR1

111

Q86XK3
KNTLKNLNVCESQSL

SFR1

116

Q86XK3
LTKTNLQLQKAACLA

RIPOR2

986

Q9Y4F9
SNQKLKQENLSLRTA

SREBF1

376

P36956
KLQAQVTLSNAQLKA

TNIP1

496

Q15025
NCLNQVKSSLLKTSK

TICRR

686

Q7Z2Z1
LKNVTNNLKSLEAAS

TPM4

161

P67936
RLNKALQDALNIKCS

TNIP3

161

Q96KP6
KNSSLKILKLSNNCI

NOD2

981

Q9HC29
LSLDSTQNNQKKVLA

SNX1

96

Q13596
NCQDLESLLLFLQKS

TRPV1

126

Q8NER1
LQSQLQVKKAALTQA

RBM17

26

Q96I25
KTNQLSQATALAKLC

ZNF292

201

O60281
QLAQKALQEKLLASQ

USP25

706

Q9UHP3
QSALSIAKEKNISLQ

TET3

341

O43151
CSRSLKNLILKNNQI

TLR7

721

Q9NYK1
LNVNDLLKQKAISSS

TOB1

211

P50616
FLKAQALTQKTNDSL

YME1L1

276

Q96TA2
LLENSTLNSKLLKVN

USP3

136

Q9Y6I4
NEFLCTLQKKLDNLQ

ZNF277

211

Q9NRM2
LNQDSNSNFKDTLLK

TRIP11

631

Q15643
TLKSNLSLVNQNKSC

ZNF432

136

O94892
TLSCNLLKQASGKNL

XPO7

191

Q9UIA9
KLNENTLKLNQTIAS

TRIM4

231

Q9C037
KIAALCKQNQDLLSF

RAPGEFL1

501

Q9UHV5
ATDLKNLQLDKNQIS

SLIT1

156

O75093
LQSACDALKDQNSKL

GOLGB1

391

Q14789
IAGCSSLNQKQKELL

N4BP2

256

Q86UW6