Cluster composition

Functions

Category	Name	IntersectionWithQuery	PValue	GenesInTerm	GenesInQuery	GenesInTermInQuery	ID
GeneOntologyBiologicalProcess	developmental growth	PLXNA3 SEMA4F MYCBP2 KIF26B SEMA5A NCOR1 KMT2C PPP2R3A SLC12A2 ALMS1 BRCA2 GLI3 ARID2 KCNJ8 PAFAH1B1 ASPM AFDN ATM NIPBL PLXNA1 KDM1A	7.98e-06	911	160	21	GO:0048589
GeneOntologyBiologicalProcess	epithelium development	RAPGEF6 ARID4A KIF26B NUP210L SEMA5A TSC2 ITGA2 RFX3 ST14 MAP3K1 NCOR1 KRT39 PPP2R3A CELSR1 KRT76 SLC12A2 ALMS1 BRCA2 RAPGEF3 GLI3 PAFAH1B1 PKHD1 AFDN CEP152 ATM ADAMTSL4 PLXNA1	2.34e-05	1469	160	27	GO:0060429
GeneOntologyBiologicalProcess	epithelial cell development	RAPGEF6 ARID4A NUP210L RFX3 ST14 MAP3K1 RAPGEF3 PKHD1 AFDN ADAMTSL4	4.93e-05	269	160	10	GO:0002064
GeneOntologyBiologicalProcess	negative regulation of TORC1 signaling	SZT2 PELI1 TSC2 ATM WDR24	5.11e-05	52	160	5	GO:1904262
GeneOntologyBiologicalProcess	olfactory nerve formation	PLXNA3 PLXNA1	5.98e-05	2	160	2	GO:0021628
GeneOntologyBiologicalProcess	regulation of GTPase activity	PLXNA3 RAPGEF6 MYO9B TSC2 ARHGAP11A TBC1D8B TBC1D4 RAPGEF3 PAFAH1B1 CD40 PLXNA1	6.36e-05	335	160	11	GO:0043087
GeneOntologyBiologicalProcess	developmental growth involved in morphogenesis	PLXNA3 SEMA4F KIF26B SEMA5A PPP2R3A SLC12A2 PAFAH1B1 AFDN PLXNA1 KDM1A	1.18e-04	299	160	10	GO:0060560
GeneOntologyBiologicalProcess	pentose metabolic process	DHDH DCXR OTOG	1.24e-04	13	160	3	GO:0019321
GeneOntologyBiologicalProcess	regulation of TORC1 signaling	GPR137 SZT2 PELI1 TSC2 ATM WDR24	1.45e-04	102	160	6	GO:1903432
GeneOntologyCellularComponent	DNA repair complex	BRCA2 FANCI ATM KDM1A	2.61e-05	23	160	4	GO:1990391
Domain	ATM/Tel1	SMG1 ATM	6.93e-05	2	156	2	IPR015519
Domain	-	PLXNA3 SEMA4F MED16 SEMA5A WDCP TLE2 PAFAH1B1 KCTD3 PLXNA1 WDR24 BRWD1	1.15e-04	333	156	11	2.130.10.10
Domain	WD40/YVTN_repeat-like_dom	PLXNA3 SEMA4F MED16 SEMA5A WDCP TLE2 PAFAH1B1 KCTD3 PLXNA1 WDR24 BRWD1	1.21e-04	335	156	11	IPR015943
Domain	Semap_dom	PLXNA3 SEMA4F SEMA5A PLXNA1	1.24e-04	31	156	4	IPR001627
Domain	SEMA	PLXNA3 SEMA4F SEMA5A PLXNA1	1.24e-04	31	156	4	PS51004
Domain	Sema	PLXNA3 SEMA4F SEMA5A PLXNA1	1.24e-04	31	156	4	SM00630
Domain	Sema	PLXNA3 SEMA4F SEMA5A PLXNA1	1.24e-04	31	156	4	PF01403
Domain	Plexin_repeat	PLXNA3 SEMA4F SEMA5A PLXNA1	1.40e-04	32	156	4	IPR002165
Domain	PSI	PLXNA3 SEMA4F SEMA5A PLXNA1	1.40e-04	32	156	4	PF01437
Domain	ALMS_motif	ALMS1 CEP295	2.07e-04	3	156	2	IPR029299
Domain	ALMS_motif	ALMS1 CEP295	2.07e-04	3	156	2	PF15309
Domain	Ig_E-set	PLXNA3 MYCBP2 KCNJ8 KCNJ15 PKHD1 PLXNA1	2.39e-04	104	156	6	IPR014756
Domain	Integrin_alpha_C_CS	ITGA1 ITGA2 ITGAE	2.96e-04	16	156	3	IPR018184
Domain	Integrin_alpha-2	ITGA1 ITGA2 ITGAE	4.25e-04	18	156	3	IPR013649
Domain	INTEGRIN_ALPHA	ITGA1 ITGA2 ITGAE	4.25e-04	18	156	3	PS00242
Domain	Integrin_alpha2	ITGA1 ITGA2 ITGAE	4.25e-04	18	156	3	PF08441
Domain	Integrin_alpha	ITGA1 ITGA2 ITGAE	4.25e-04	18	156	3	IPR000413
Domain	PSI	PLXNA3 SEMA4F SEMA5A PLXNA1	4.90e-04	44	156	4	IPR016201
Domain	Int_alpha	ITGA1 ITGA2 ITGAE	5.02e-04	19	156	3	SM00191
Domain	Int_alpha_beta-p	ITGA1 ITGA2 ITGAE	5.02e-04	19	156	3	IPR013519
Domain	ARM-type_fold	SMG1 TSC2 ARMCX3 MAP3K1 RIF1 ARID2 ASPM ATM NIPBL ARMC8	5.74e-04	339	156	10	IPR016024
Domain	PSI	PLXNA3 SEMA4F SEMA5A PLXNA1	5.82e-04	46	156	4	SM00423
Domain	IQ	MYO9B OBSCN SCN7A SCN8A ASPM	5.86e-04	81	156	5	SM00015
Domain	FATC	SMG1 ATM	6.82e-04	5	156	2	PF02260
Domain	FG_GAP	ITGA1 ITGA2 ITGAE	7.83e-04	22	156	3	PS51470
Domain	IQ_motif_EF-hand-BS	MYO9B OBSCN SCN7A SCN8A ASPM	9.47e-04	90	156	5	IPR000048
Domain	FG-GAP	ITGA1 ITGA2 ITGAE	1.02e-03	24	156	3	PF01839
Domain	FG-GAP	ITGA1 ITGA2 ITGAE	1.02e-03	24	156	3	IPR013517
Domain	FAT	SMG1 ATM	1.02e-03	6	156	2	PS51189
Domain	FATC	SMG1 ATM	1.02e-03	6	156	2	PS51190
Domain	FATC_dom	SMG1 ATM	1.02e-03	6	156	2	IPR003152
Domain	PIK_FAT	SMG1 ATM	1.02e-03	6	156	2	IPR014009
Domain	FATC	SMG1 ATM	1.02e-03	6	156	2	SM01343
Domain	Integrin_dom	ITGA1 ITGA2 ITGAE	1.15e-03	25	156	3	IPR032695
Domain	IPT	PLXNA3 PKHD1 PLXNA1	1.44e-03	27	156	3	SM00429
Domain	ARM-like	SMG1 TSC2 ARMCX3 RIF1 ARID2 ASPM NIPBL ARMC8	1.98e-03	270	156	8	IPR011989
Domain	RA	RAPGEF6 MYO9B AFDN	2.16e-03	31	156	3	SM00314
Domain	TIG	PLXNA3 PKHD1 PLXNA1	2.16e-03	31	156	3	PF01833
Domain	FHA_DOMAIN	PHF12 FHAD1 AFDN	2.16e-03	31	156	3	PS50006
Domain	IPT	PLXNA3 PKHD1 PLXNA1	2.37e-03	32	156	3	IPR002909
Domain	Plexin_cytopl	PLXNA3 PLXNA1	2.40e-03	9	156	2	PF08337
Domain	ZF_SWIM	ZSWIM8 MAP3K1	2.40e-03	9	156	2	PS50966
Domain	Plexin_cytoplasmic_RasGAP_dom	PLXNA3 PLXNA1	2.40e-03	9	156	2	IPR013548
Domain	Plexin	PLXNA3 PLXNA1	2.40e-03	9	156	2	IPR031148
Domain	RFX_DNA_binding	RFX3 ARID2	2.40e-03	9	156	2	PF02257
Domain	DNA-bd_RFX	RFX3 ARID2	2.40e-03	9	156	2	IPR003150
Domain	Znf_SWIM	ZSWIM8 MAP3K1	2.40e-03	9	156	2	IPR007527
Domain	RFX_DBD	RFX3 ARID2	2.40e-03	9	156	2	PS51526
Domain	IQ	MYO9B OBSCN SCN8A ASPM	2.95e-03	71	156	4	PF00612
Domain	Na_channel_asu	SCN7A SCN8A	2.99e-03	10	156	2	IPR001696
Domain	Na_trans_assoc	SCN7A SCN8A	2.99e-03	10	156	2	IPR010526
Domain	Na_trans_assoc	SCN7A SCN8A	2.99e-03	10	156	2	PF06512
Domain	-	PHF12 FHAD1 AFDN	3.33e-03	36	156	3	2.60.200.20
Domain	FHA_dom	PHF12 FHAD1 AFDN	3.33e-03	36	156	3	IPR000253
Domain	RA	RAPGEF6 MYO9B AFDN	3.33e-03	36	156	3	PF00788
Domain	RA	RAPGEF6 MYO9B AFDN	3.61e-03	37	156	3	PS50200
Domain	Ribosomal_L7Ae	SECISBP2L RPL7A	3.63e-03	11	156	2	PF01248
Domain	Ribosomal_L7Ae/L30e/S12e/Gad45	SECISBP2L RPL7A	4.33e-03	12	156	2	IPR004038
Domain	RA_dom	RAPGEF6 MYO9B AFDN	4.50e-03	40	156	3	IPR000159
Domain	VWFA	ITGA1 ITGA2 ITGAE HMCN2	4.94e-03	82	156	4	PS50234
Domain	VWA	ITGA1 ITGA2 ITGAE HMCN2	5.39e-03	84	156	4	SM00327
Domain	PLAC	ADAMTS17 ADAMTSL4	5.91e-03	14	156	2	PF08686
Domain	Rho_GTPase_activation_prot	PLXNA3 MYO9B ARHGAP11A PLXNA1	6.34e-03	88	156	4	IPR008936
Domain	-	ARID4A ARID2	6.78e-03	15	156	2	1.10.150.60
Domain	BRIGHT	ARID4A ARID2	6.78e-03	15	156	2	SM00501
Domain	ARID_dom	ARID4A ARID2	6.78e-03	15	156	2	IPR001606
Domain	ARID	ARID4A ARID2	6.78e-03	15	156	2	PS51011
Domain	-	SECISBP2L RPL7A	6.78e-03	15	156	2	3.30.1330.30
Domain	PI3/4_kinase_CS	SMG1 ATM	6.78e-03	15	156	2	IPR018936
Domain	L30e-like	SECISBP2L RPL7A	6.78e-03	15	156	2	IPR029064
Domain	ARID	ARID4A ARID2	6.78e-03	15	156	2	PF01388
Domain	IQ	MYO9B OBSCN SCN8A ASPM	7.69e-03	93	156	4	PS50096
Domain	-	SMG1 ATM	7.70e-03	16	156	2	1.10.1070.11
Domain	IRK	KCNJ8 KCNJ15	7.70e-03	16	156	2	PF01007
Domain	PI3Kc	SMG1 ATM	7.70e-03	16	156	2	SM00146
Domain	K_chnl_inward-rec_Kir_cyto	KCNJ8 KCNJ15	7.70e-03	16	156	2	IPR013518
Domain	-	KCNJ8 KCNJ15	7.70e-03	16	156	2	2.60.40.1400
Domain	K_chnl_inward-rec_Kir	KCNJ8 KCNJ15	7.70e-03	16	156	2	IPR016449
Pubmed	Identification of motif-based interactions between SARS-CoV-2 protein domains and human peptide ligands pinpoint antiviral targets.	SEMA4F HIVEP1 ANKHD1 TBC1D8B AKAP12 NCOR1 KMT2C RIF1 ALMS1 GLI3 CEP295 ZNF292	1.31e-09	233	164	12	37704626
Pubmed	Proximity-dependent biotin identification (BioID) reveals a dynamic LSD1-CoREST interactome during embryonic stem cell differentiation.	RAPGEF6 HIVEP1 MYCBP2 PHF12 ZNF507 ICE1 ANKHD1 NCOR1 TBC1D4 FAM193A ALMS1 BRCA2 WDCP ZBTB21 KDM1A	1.59e-09	418	164	15	34709266
Pubmed	A dual-activity topoisomerase complex regulates mRNA translation and turnover.	PLXNA3 SEMA4F RAPGEF6 SH3RF1 MYCBP2 SZT2 MYO9B INPP5E PHF12 OBSCN TSC2 ICE1 ANKHD1 ST14 NCOR1 KMT2C CELSR1 FANCI FURIN SCN8A DHX34 PLXNA1 WDR24	2.66e-09	1105	164	23	35748872
Pubmed	Human transcription factor protein interaction networks.	SMG1 EYA4 HIVEP1 ARID4A DHX40 PHF12 ZNF507 HIPK2 SLC5A9 ANKHD1 FHAD1 NCOR1 KMT2C RIF1 ALMS1 WDCP GLI3 ARID2 ZBTB21 MARF1 CEP152 QSER1 USP27X NIPBL KDM1A	1.63e-08	1429	164	25	35140242
Pubmed	Prediction of the coding sequences of mouse homologues of KIAA gene: III. the complete nucleotide sequences of 500 mouse KIAA-homologous cDNAs identified by screening of terminal sequences of cDNA clones randomly sampled from size-fractionated libraries.	SMG1 SZT2 INPP5E PHF12 ZNF507 ICE1 FASTKD2 ARHGAP11A ANKHD1 KMT2C HECW2 ZBTB21 CEP126 DHX34 KDM1A	3.67e-08	529	164	15	14621295
Pubmed	E3 ubiquitin ligase RNF123 targets lamin B1 and lamin-binding proteins.	SEMA4F KIF26B OBSCN RNF213 PCARE TSC2 ICE1 ARHGAP11A ITGAE KMT2C TBC1D4 HECW2 SCN8A PKHD1 USP17L3 CEP295 ATM	8.48e-08	736	164	17	29676528
Pubmed	Genome-wide CRISPR screens identify novel regulators of wild-type and mutant p53 stability.	ZSWIM8 HIVEP1 SH3RF1 MYO9B DHX40 ZNF507 HIPK2 NCOR1 TBC1D4 ALMS1 BRCA2 WDCP ARID2 ASPM KDM1A	1.44e-07	588	164	15	38580884
Pubmed	Interaction network of human early embryonic transcription factors.	EYA4 HIVEP1 ARID4A PHF12 NCOR1 KMT2C ALMS1 ARID2 QSER1 NIPBL KDM1A	9.83e-07	351	164	11	38297188
Pubmed	Semaphorin 5A inhibits synaptogenesis in early postnatal- and adult-born hippocampal dentate granule cells.	PLXNA3 SEMA5A PLXNA1	1.02e-06	5	164	3	25313870
Pubmed	Functional interaction of monoubiquitinated FANCD2 and BRCA2/FANCD1 in chromatin.	BRCA2 FANCI ATM	1.02e-06	5	164	3	15199141
Pubmed	An organelle-specific protein landscape identifies novel diseases and molecular mechanisms.	SECISBP2L EYA4 MYCBP2 INPP5E PCARE TSC2 RFX3 AKAP12 RIF1 TBC1D4 WDCP GLI3 PAFAH1B1 KCTD3 ZBTB21 MARF1 AFDN QSER1 KDM1A WDR24 ARMC8	1.20e-06	1321	164	21	27173435
Pubmed	Protein interaction network of the mammalian Hippo pathway reveals mechanisms of kinase-phosphatase interactions.	RAPGEF6 CTTNBP2 SH3RF1 TSC2 FBXL16 TBC1D4 FAM193A ALMS1 ACAD11 AFDN CEP295 CEP152	1.54e-06	446	164	12	24255178
Pubmed	A central chaperone-like role for 14-3-3 proteins in human cells.	RAPGEF6 HIVEP1 SH3RF1 MYCBP2 KIF26B INPP5E TSC2 CEP350 TBC1D4 SLC12A2 ALMS1 IKBKE ZBTB21 AFDN CEP152 OTOG	3.53e-06	861	164	16	36931259
Pubmed	A semaphorin code defines subpopulations of spinal motor neurons during mouse development.	PLXNA3 SEMA4F SEMA5A PLXNA1	4.70e-06	24	164	4	15869472
Pubmed	The in vivo Interaction Landscape of Histones H3.1 and H3.3.	HIVEP1 ARID4A PHF12 ARHGAP11A RIF1 FANCI ARID2 ZBTB21 QSER1 NIPBL KDM1A ZNF292 BRWD1	6.92e-06	608	164	13	36089195
Pubmed	Proximity interactions among centrosome components identify regulators of centriole duplication.	MYCBP2 KIZ CEP350 ALMS1 CEP295 CEP152	8.78e-06	101	164	6	24613305
Pubmed	Exome sequencing identifies breast cancer susceptibility genes and defines the contribution of coding variants to breast cancer risk.	MAP3K1 BRCA2 ATM	1.21e-05	10	164	3	37592023
Pubmed	Shotgun sequencing of the human transcriptome with ORF expressed sequence tags.	PLXNA3 SMG1 ZSWIM8 FSTL3 SZT2 MYO9B RNF213 ITGA2 FAM193A USP27X DHX34 ADAMTSL4	1.34e-05	552	164	12	10737800
Pubmed	The human cytoplasmic dynein interactome reveals novel activators of motility.	DHX40 KIZ PHF12 PRDX4 ZNF507 CEP350 NCOR1 PPP2R3A ALMS1 BRCA2 WDCP AFDN CEP295 CEP152 BRWD1	1.38e-05	853	164	15	28718761
Pubmed	Identifications of novel host cell factors that interact with the receptor-binding domain of the SARS-CoV-2 spike protein.	SECISBP2L SMG1 EYA4 RAPGEF6 DHX40 ANKHD1 ACAD11 WDCP MARF1 AFDN QSER1 DHX34 COG4	1.40e-05	650	164	13	38777146
Pubmed	USP7 Regulates Cytokinesis through FBXO38 and KIF20B.	HIVEP1 DHX40 ZNF507 ARHGAP11A ZBTB21 QSER1	1.94e-05	116	164	6	30804394
Pubmed	Large-scale characterization of HeLa cell nuclear phosphoproteins.	RAPGEF6 HIVEP1 MYCBP2 ARID4A PHF12 ZNF507 SEMA5A NCOR1 RIF1 TBC1D4 ZBTB21 AFDN ATM NIPBL	1.99e-05	774	164	14	15302935
Pubmed	USP7 represses lineage differentiation genes in mouse embryonic stem cells by both catalytic and noncatalytic activities.	ANKRD31 USP17L4 EYA4 COL26A1 SPP2 PRDX4 SIGLEC14 TBC1D8B ARMCX3 GFRA2 NANOGP1 IKBKE USP17L3	2.05e-05	674	164	13	37196079
Pubmed	A human MAP kinase interactome.	HIVEP1 SH3RF1 KIF26B HIPK2 CEP350 KMT2C RIF1 ARID2 KIAA1328 COG4 RPL7A	2.14e-05	486	164	11	20936779
Pubmed	Cell cycle-dependent expression of Dub3, Nanog and the p160 family of nuclear receptor coactivators (NCoAs) in mouse embryonic stem cells.	USP17L4 NANOGP1 USP17L3	2.20e-05	12	164	3	24695638
Pubmed	SMG1 heterozygosity exacerbates haematopoietic cancer development in Atm null mice by increasing persistent DNA damage and oxidative stress.	SMG1 ATM	2.21e-05	2	164	2	31565865
Pubmed	TNF-α promotes cerebral pericyte remodeling in vitro, via a switch from α1 to α2 integrins.	ITGA1 ITGA2	2.21e-05	2	164	2	23448258
Pubmed	The effects of inhibition and siRNA knockdown of collagen-binding integrins on human umbilical vein endothelial cell migration and tube formation.	ITGA1 ITGA2	2.21e-05	2	164	2	36517525
Pubmed	hSMG-1 and ATM sequentially and independently regulate the G1 checkpoint during oxidative stress.	SMG1 ATM	2.21e-05	2	164	2	18332866
Pubmed	TRM integrins CD103 and CD49a differentially support adherence and motility after resolution of influenza virus infection.	ITGA1 ITGAE	2.21e-05	2	164	2	32439709
Pubmed	Metastatic Prostate Cancers with BRCA2 versus ATM Mutations Exhibit Divergent Molecular Features and Clinical Outcomes.	BRCA2 ATM	2.21e-05	2	164	2	37126020
Pubmed	Acquired Cystic Kidney Disease-associated Renal Cell Carcinoma (ACKD-RCC) Harbor Recurrent Mutations in KMT2C and TSC2 Genes.	TSC2 KMT2C	2.21e-05	2	164	2	32604168
Pubmed	TSRC1, a widely expressed gene containing seven thrombospondin type I repeats.	SCN8A ADAMTSL4	2.21e-05	2	164	2	12706885
Pubmed	The interleukin-2 receptor α chain (CD25) plays an important role in regulating monocyte-derived CD40 expression during anti-porcine cellular responses.	CD40 IL2RA	2.21e-05	2	164	2	22564647
Pubmed	Collagen receptors α(1)β(1) and α(2)β(1) integrins are involved in transmigration of peripheral blood eosinophils, but not mononuclear cells through human microvascular endothelial cells monolayer.	ITGA1 ITGA2	2.21e-05	2	164	2	23070086
Pubmed	[Study of C807T polymorphism of the platelet collagen receptor alpha2 gene coding sequence in Suzhou Han population].	ITGA1 ITGA2	2.21e-05	2	164	2	11877061
Pubmed	Extreme Response to High-dose Testosterone in BRCA2- and ATM-mutated Prostate Cancer.	BRCA2 ATM	2.21e-05	2	164	2	27692705
Pubmed	Influence of collagen-based integrin α1 and α2 mediated signaling on human mesenchymal stem cell osteogenesis in three dimensional contexts.	ITGA1 ITGA2	2.21e-05	2	164	2	29761640
Pubmed	Association between pathogenic germline mutations in BRCA2 and ATM and tumor-infiltrating lymphocytes in primary prostate cancer.	BRCA2 ATM	2.21e-05	2	164	2	34533610
Pubmed	Androgens and integrins in salivary glands in Sjogren's syndrome.	ITGA1 ITGA2	2.21e-05	2	164	2	20436081
Pubmed	Prostaglandin E2 inhibits the proliferation of human gingival fibroblasts via the EP2 receptor and Epac.	PTGER2 RAPGEF3	2.21e-05	2	164	2	19582788
Pubmed	ALMS1 and Alström syndrome: a recessive form of metabolic, neurosensory and cardiac deficits.	ALMS1 CEP295	2.21e-05	2	164	2	30421101
Pubmed	Systematic bromodomain protein screens identify homologous recombination and R-loop suppression pathways involved in genome integrity.	ZSWIM8 PHF12 RNF213 ANKHD1 SP110 HMCN2 ALMS1 ACAD11 GLI3 ARID2 ZBTB21 ASPM CEP295 DHX34 KDM1A ALPL BRWD1	2.30e-05	1116	164	17	31753913
Pubmed	Prediction of the coding sequences of mouse homologues of KIAA gene: IV. The complete nucleotide sequences of 500 mouse KIAA-homologous cDNAs identified by screening of terminal sequences of cDNA clones randomly sampled from size-fractionated libraries.	SECISBP2L CTTNBP2 SH3RF1 RNF213 ZNF407 GPRIN3 CEP350 ALMS1 ARID2 ATP11A CEP152	2.44e-05	493	164	11	15368895
Pubmed	FBXO22 promotes leukemogenesis by targeting BACH1 in MLL-rearranged acute myeloid leukemia.	IGKV1-33 DCHS2 OBSCN KMT2C IKBKE ARID2 ATM RMND1 IGKV1D-33 KDM1A ZNF292	2.62e-05	497	164	11	36774506
Pubmed	Proteome-scale mapping of binding sites in the unstructured regions of the human proteome.	DLGAP2 RAPGEF6 TSC22D2 MAP3K1 NCOR1 KRT76 FAM193A SLC12A2 ARID2 ATM	4.07e-05	430	164	10	35044719
Pubmed	Proximity-dependent Mapping of the Androgen Receptor Identifies Kruppel-like Factor 4 as a Functional Partner.	HIVEP1 MED16 PHF12 NCOR1 ZBTB21 QSER1 NIPBL KDM1A	4.34e-05	268	164	8	33640491
Pubmed	Integrin requirement for hippocampal synaptic plasticity and spatial memory.	ITGA1 ITGA2 ITGAE	5.51e-05	16	164	3	12904471
Pubmed	Aurora B opposes PP1 function in mitosis by phosphorylating the conserved PP1-binding RVxF motif in PP1 regulatory proteins.	TSC2 RIF1 ASPM	5.51e-05	16	164	3	29764992
Pubmed	Interactomes of Glycogen Synthase Kinase-3 Isoforms.	RAPGEF6 KIF26B CEP350 TBC1D4 FAM193A ALMS1 CEP152	6.42e-05	209	164	7	36779422
Pubmed	Transcriptome characterization elucidates signaling networks that control human ES cell growth and differentiation.	PLXNA3 CTTNBP2 MYCBP2 MYO9B OBSCN HIPK2 ITGA2 RAPGEF3 FANCI FER1L4 ARID2 MARF1 CEP152 DHX34 KLKB1 NIPBL ALPL	6.60e-05	1215	164	17	15146197
Pubmed	Stromal C-type lectin receptor COLEC12 integrates H. pylori, PGE2-EP2/4 axis and innate immunity in gastric diseases.	PTGER2 COLEC12	6.61e-05	3	164	2	29491476
Pubmed	TSC2 modulates cell adhesion and migration via integrin-α1β1.	TSC2 ITGA1	6.61e-05	3	164	2	22923640
Pubmed	BRCA2 is required for neurogenesis and suppression of medulloblastoma.	BRCA2 ATM	6.61e-05	3	164	2	17476307
Pubmed	Study design: evaluating gene-environment interactions in the etiology of breast cancer - the WECARE study.	BRCA2 ATM	6.61e-05	3	164	2	15084244
Pubmed	Multigenerational autosomal dominant inheritance of 5p chromosomal deletions.	SEMA5A ICE1	6.61e-05	3	164	2	26601658
Pubmed	Mutations in ATM, NBN and BRCA2 predispose to aggressive prostate cancer in Poland.	BRCA2 ATM	6.61e-05	3	164	2	32875559
Pubmed	Androgen receptor acetylation governs trans activation and MEKK1-induced apoptosis without affecting in vitro sumoylation and trans-repression function.	MAP3K1 NCOR1	6.61e-05	3	164	2	11971970
Pubmed	Transcriptional and epigenetic regulation of the integrin collagen receptor locus ITGA1-PELO-ITGA2.	ITGA1 ITGA2	6.61e-05	3	164	2	17669516
Pubmed	BRCA2, ATM, and CDK12 Defects Differentially Shape Prostate Tumor Driver Genomics and Clinical Aggression.	BRCA2 ATM	6.61e-05	3	164	2	33414135
Pubmed	Type VIII collagen stimulates smooth muscle cell migration and matrix metalloproteinase synthesis after arterial injury.	ITGA1 ITGA2	6.61e-05	3	164	2	10666376
Pubmed	Screening for ATM sequence alterations in African-American women diagnosed with breast cancer.	BRCA2 ATM	6.61e-05	3	164	2	17333338
Pubmed	Vimocin and vidapin, cyclic KTS peptides, are dual antagonists of α1β1/α2β1 integrins with antiangiogenic activity.	ITGA1 ITGA2	6.61e-05	3	164	2	24939421
Pubmed	Expression of beta 1 integrins in human dental pulp in vivo: a comparative immunohistochemical study on healthy and chronic marginal periodontitis samples.	ITGA1 ITGA2	6.61e-05	3	164	2	11307375
Pubmed	The crucial role of collagen-binding integrins in maintaining the mechanical properties of human scleral fibroblasts-seeded collagen matrix.	ITGA1 ITGA2	6.61e-05	3	164	2	21647271
Pubmed	Integrins alpha1beta1 and alpha2beta1 are receptors for the rotavirus enterotoxin.	ITGA1 ITGA2	6.61e-05	3	164	2	18587047
Pubmed	Mechanism of RAD51-dependent DNA interstrand cross-link repair.	BRCA2 FANCI	6.61e-05	3	164	2	21719678
Pubmed	Variants in the ATM-BRCA2-CHEK2 axis predispose to chronic lymphocytic leukemia.	BRCA2 ATM	6.61e-05	3	164	2	16574953
Pubmed	Ligand recognition by the I domain-containing integrins.	ITGA2 ITGAE	6.61e-05	3	164	2	9676575
Pubmed	Identification of plexin family molecules in mice.	PLXNA3 PLXNA1	6.61e-05	3	164	2	8806646
Pubmed	Is olaparib cost effective in metastatic castration-resistant prostate cancer patients with at least one favorable gene mutation in BRCA1, BRCA2 or ATM?	BRCA2 ATM	6.61e-05	3	164	2	34517749
Pubmed	Expression and functional importance of collagen-binding integrins, alpha 1 beta 1 and alpha 2 beta 1, on virus-activated T cells.	ITGA1 ITGA2	6.61e-05	3	164	2	12960301
Pubmed	Determination of the ligand-binding specificities of the alpha2beta1 and alpha1beta1 integrins in a novel 3-dimensional in vitro model of pancreatic cancer.	ITGA1 ITGA2	6.61e-05	3	164	2	17312461
Pubmed	Differential expression of plexin-A subfamily members in the mouse nervous system.	PLXNA3 PLXNA1	6.61e-05	3	164	2	11241833
Pubmed	Rare germline variants in DNA repair genes and the angiogenesis pathway predispose prostate cancer patients to develop metastatic disease.	BRCA2 ATM	6.61e-05	3	164	2	29915322
Pubmed	DNA Repair Deficiency Is Common in Advanced Prostate Cancer: New Therapeutic Opportunities.	BRCA2 ATM	6.61e-05	3	164	2	27317574
Pubmed	Clonal characterization of the human IgG antibody repertoire to Haemophilus influenzae type b polysaccharide. IV. The less frequently expressed VL are heterogeneous.	IGKV1-33 IGKV1D-33	6.61e-05	3	164	2	1940382
Pubmed	Centriolar association of ALMS1 and likely centrosomal functions of the ALMS motif-containing proteins C10orf90 and KIAA1731.	ALMS1 CEP295	6.61e-05	3	164	2	20844083
Pubmed	Association between mitogen-activated protein kinase kinase kinase 1 rs889312 polymorphism and breast cancer risk: evidence from 59,977 subjects.	MAP3K1 BRCA2	6.61e-05	3	164	2	20809358
Pubmed	Homeodomain-interacting protein kinase-2 phosphorylates p53 at Ser 46 and mediates apoptosis.	HIPK2 ATM	6.61e-05	3	164	2	11780126
Pubmed	Vascular collagens: spotlight on the role of type VIII collagen in atherogenesis.	ITGA1 ITGA2	6.61e-05	3	164	2	12482545
Pubmed	SCART scavenger receptors identify a novel subset of adult gammadelta T cells.	SCART1 IL2RA	6.61e-05	3	164	2	18641307
Pubmed	Studies of protein-protein interactions in Fanconi anemia pathway to unravel the DNA interstrand crosslink repair mechanism.	BRCA2 FANCI	6.61e-05	3	164	2	28684355
Pubmed	The ATM-related kinase, hSMG-1, bridges genome and RNA surveillance pathways.	SMG1 ATM	6.61e-05	3	164	2	15279777
Pubmed	Integrin α1/β1 and α2/β1 as a receptor for IgA1 in human glomerular mesangial cells in IgA nephropathy.	ITGA1 ITGA2	6.61e-05	3	164	2	22298882
Pubmed	Myeloid translocation gene 16b is a dual A-kinase anchoring protein that interacts selectively with plexins in a phospho-regulated manner.	PLXNA3 PLXNA1	6.61e-05	3	164	2	20138877
Pubmed	alpha11beta1 integrin is a receptor for interstitial collagens involved in cell migration and collagen reorganization on mesenchymal nonmuscle cells.	ITGA1 ITGA2	6.61e-05	3	164	2	11518510
Pubmed	ATM signals to TSC2 in the cytoplasm to regulate mTORC1 in response to ROS.	TSC2 ATM	6.61e-05	3	164	2	20160076
Pubmed	A direct physical interaction between Nanog and Sox2 regulates embryonic stem cell self-renewal.	NCOR1 KMT2C NANOGP1 BRCA2 QSER1 KDM1A	7.05e-05	146	164	6	23892456
Pubmed	Defining the proximal interaction networks of Arf GTPases reveals a mechanism for the regulation of PLD1 and PI4KB.	RNF213 GPRIN3 ARMCX3 AKAP12 CEP350 NCOR1 RIF1 PPP2R3A SLC12A2 GLI3 FURIN AFDN RPL7A	8.71e-05	777	164	13	35844135
Pubmed	Comprehensive Interactome Mapping of the DNA Repair Scaffold SLX4 Using Proximity Labeling and Affinity Purification.	DHX40 ARHGAP11A ACAD11 BRCA2 FANCI ZBTB21 NIPBL	9.36e-05	222	164	7	37071664
Pubmed	CDK4/6-dependent activation of DUB3 regulates cancer metastasis through SNAIL1.	USP17L4 USP17L3 ATM	9.44e-05	19	164	3	28067227
Pubmed	Cellular mechanisms of fatal early-onset autoimmunity in mice with the T cell-specific targeting of transforming growth factor-beta receptor.	ITGA1 ITGA2 IL2RA	9.44e-05	19	164	3	16973387
Pubmed	An extracellular biochemical screen reveals that FLRTs and Unc5s mediate neuronal subtype recognition in the retina.	PLXNA3 SEMA4F SEMA5A PLXNA1	1.08e-04	52	164	4	26633812
Pubmed	Genetic nomenclature for loci controlling surface antigens of mouse hemopoietic cells.	ITGA1 ITGA2 CD40 IL2RA	1.17e-04	53	164	4	1431091
Pubmed	Class 5 transmembrane semaphorins control selective Mammalian retinal lamination and function.	PLXNA3 SEMA5A PLXNA1	1.29e-04	21	164	3	21835343
Pubmed	A novel binding site in collagen type III for integrins alpha1beta1 and alpha2beta1.	ITGA1 ITGA2	1.32e-04	4	164	2	16043429
Pubmed	Discoidin domain receptors promote α1β1- and α2β1-integrin mediated cell adhesion to collagen by enhancing integrin activation.	ITGA1 ITGA2	1.32e-04	4	164	2	23284937
Pubmed	Interaction between BRCA1/BRCA2 and ATM/ATR associate with breast cancer susceptibility in a Chinese Han population.	BRCA2 ATM	1.32e-04	4	164	2	20513533
Pubmed	VEGF-A promotes tissue repair-associated lymphatic vessel formation via VEGFR-2 and the alpha1beta1 and alpha2beta1 integrins.	ITGA1 ITGA2	1.32e-04	4	164	2	15132990
Interaction	SERPINI1 interactions	TSC2 ST14 FURIN PLAT	7.74e-07	10	160	4	int:SERPINI1
Interaction	CEP85 interactions	EYA4 MAP3K1 CEP350 FAM193A ALMS1 WDCP GLI3 TLE2 MARF1 CEP152	1.02e-06	169	160	10	int:CEP85
Interaction	PHF21A interactions	RAPGEF6 HIVEP1 MYCBP2 PHF12 ZNF507 ICE1 ANKHD1 TBC1D4 FAM193A ALMS1 BRCA2 WDCP KDM1A	3.72e-06	343	160	13	int:PHF21A
Interaction	TRIM52 interactions	MYO9B DHX40 CEP350 NCOR1 ALMS1 BRCA2 ASPM CEP295	1.12e-05	133	160	8	int:TRIM52
Interaction	SEMA5A interactions	PLXNA3 SEMA5A PLXNA1	1.68e-05	7	160	3	int:SEMA5A
Interaction	CEP120 interactions	RAPGEF6 CEP350 ALMS1 FANCI WDCP CEP295 CEP152	2.20e-05	106	160	7	int:CEP120
Interaction	CFAP299 interactions	ANKRD30B ACAD11 BRCA2	2.67e-05	8	160	3	int:CFAP299
Interaction	EN1 interactions	HIVEP1 NCOR1 KMT2C RIF1 TLE2 QSER1 NIPBL	2.80e-05	110	160	7	int:EN1
Interaction	GATA2 interactions	EYA4 HIVEP1 NCOR1 KMT2C ARID2 QSER1 ADAMTSL4 NIPBL KDM1A	3.11e-05	199	160	9	int:GATA2
Interaction	AMOT interactions	EYA4 CEP350 RIF1 FAM193A ALMS1 ACAD11 HECW2 WDCP KIAA1328 CEP152 KDM1A	4.12e-05	312	160	11	int:AMOT
Interaction	RCOR1 interactions	RAPGEF6 HIVEP1 MYCBP2 ARID4A PHF12 ICE1 ANKHD1 NCOR1 FAM193A ALMS1 BRCA2 WDCP ZBTB21 KDM1A	4.14e-05	494	160	14	int:RCOR1
Interaction	IRF5 interactions	HIVEP1 PELI1 NCOR1 IKBKE CEP152	6.84e-05	54	160	5	int:IRF5
Interaction	HNF4A interactions	HIVEP1 MED16 PHF12 NCOR1 KMT2C ARID2 ZBTB21 QSER1 NIPBL KDM1A	7.18e-05	275	160	10	int:HNF4A
Interaction	FHL3 interactions	EYA4 MYCBP2 OBSCN HIPK2 ANKHD1 RFX3 KCTD3 ZBTB21 QSER1 ADAMTSL4	7.39e-05	276	160	10	int:FHL3
Interaction	TNRC6B interactions	DLGAP2 EYA4 KIZ FAM193A ALMS1 GLI3 MARF1 AFDN CEP152 KDM1A	8.84e-05	282	160	10	int:TNRC6B
GeneFamily	CD molecules\|Integrin alpha subunits	ITGA1 ITGA2 ITGAE	1.42e-04	18	104	3	1160
GeneFamily	Components of oligomeric golgi complex	COG3 COG4	8.97e-04	8	104	2	493
GeneFamily	Zinc fingers SWIM-type\|Mitogen-activated protein kinase kinase kinases	ZSWIM8 MAP3K1	1.15e-03	9	104	2	90
GeneFamily	Plexins	PLXNA3 PLXNA1	1.15e-03	9	104	2	683
GeneFamily	AT-rich interaction domain containing	ARID4A ARID2	3.28e-03	15	104	2	418
GeneFamily	DEAH-box helicases	DHX40 DHX34	3.73e-03	16	104	2	500
GeneFamily	Potassium voltage-gated channel subfamily J	KCNJ8 KCNJ15	3.73e-03	16	104	2	276
GeneFamily	Armadillo repeat containing\|Protein phosphatase 1 regulatory subunits	TSC2 PPP1R3A NCOR1 SLC12A2 MARF1	3.94e-03	181	104	5	694
Coexpression	BUSSLINGER_GASTRIC_IMMUNE_CELLS	SMG1 RAPGEF6 MYCBP2 ARID4A MYO9B RNF213 GPRIN3 ICE1 ITGA1 ITGAE PTGER2 SP110 EPG5 CD84 CEP350 NCOR1 KMT2C RIF1 TBC1D4 SYTL3 ARID2 PAFAH1B1 ATM NIPBL RPL7A ZNF292 BRWD1	4.77e-07	1492	162	27	M40023
Coexpression	HAMAI_APOPTOSIS_VIA_TRAIL_UP	RAPGEF6 CTTNBP2 MYCBP2 HIPK2 ZNF407 ARHGAP11A ANKHD1 ARMCX3 TTLL7 CEP350 RIF1 PPP2R3A ASPM ATM QSER1 NIPBL	3.36e-06	656	162	16	M18979
Coexpression	BOSCO_ALLERGEN_INDUCED_TH2_ASSOCIATED_MODULE	HIPK2 SEMA5A PTGER2 CD84 SLC12A2 SYTL3 FURIN IL2RA	4.48e-06	150	162	8	M2526
Coexpression	CUI_TCF21_TARGETS_2_DN	SECISBP2L HIVEP1 CTTNBP2 ARID4A GPRIN3 SEMA5A ITGA2 ARMCX3 TTLL7 COLEC12 NCOR1 KMT2C SLC12A2 RAPGEF3 HECW2 SCN7A PLAT ARMC8	6.11e-06	854	162	18	M1533
Coexpression	GSE15330_HSC_VS_MEGAKARYOCYTE_ERYTHROID_PROGENITOR_DN	RAPGEF6 MYCBP2 ARID4A PELI1 ITGAE IKBKE ATM QSER1	1.03e-05	168	162	8	M7007
Coexpression	CUI_TCF21_TARGETS_2_DN	SECISBP2L HIVEP1 CTTNBP2 ARID4A GPRIN3 SEMA5A ITGA2 ARMCX3 TTLL7 COLEC12 NCOR1 KMT2C SLC12A2 RAPGEF3 HECW2 SCN7A PLAT ARMC8	1.04e-05	888	162	18	MM1018
Coexpression	GSE27241_WT_VS_RORGT_KO_TH17_POLARIZED_CD4_TCELL_TREATED_WITH_DIGOXIN_UP	SMG1 MYO9B TSC2 CEP350 NCOR1 KMT2C RIF1 ATM	1.70e-05	180	162	8	M8239
Coexpression	GSE21670_UNTREATED_VS_TGFB_TREATED_STAT3_KO_CD4_TCELL_DN	HIPK2 SEMA5A PTGER2 CD84 SLC12A2 SYTL3 FURIN IL2RA	3.49e-05	199	162	8	M7463
CoexpressionAtlas	FacebaseRNAseq_e10.5_Neural Epithelium Flanking Eminence_top-relative-expression-ranked_1000_k-means-cluster#2	EYA4 ARID4A KIZ ANKHD1 CD84 NCOR1 RIF1 FAM193A ALMS1 BRCA2 GLI3 ASPM CEP295 NIPBL ZNF292	1.22e-08	311	158	15	Facebase_RNAseq_e10.5_Neural Epithelium Flanking Eminence_1000_K2
CoexpressionAtlas	alpha beta T cells, T.8Nve.PP, TCRb+ CD8+ CD44low CD62L high, Peyer's Patch, avg-1	SMG1 RAPGEF6 PELI1 GPRIN3 ITGAE RFX3 CEP350 KMT2C RIF1 SYTL3 IKBKE ATM ZNF292 BRWD1	2.32e-07	336	158	14	GSM538413_500
CoexpressionAtlas	DevelopingKidney_e15.5_anlage of loop of Henle_emap-31283_top-relative-expression-ranked_1000	SMG1 EYA4 RAPGEF6 SH3RF1 MYCBP2 SPP2 HIPK2 PELI1 SEMA5A ST14 CEP350 NCOR1 CELSR1 FAM193A WDCP ARID2 SCN7A SCN8A PKHD1 BRWD1	1.96e-06	795	158	20	gudmap_developingKidney_e15.5_anlage of loop of Henle_1000
CoexpressionAtlas	facebase_RNAseq_e10.5_Emin_LatNas_2500_K3	EYA4 ARID4A DHX40 HIPK2 GFRA2 CEP350 RIF1 FAM193A DHDH ALMS1 BRCA2 GLI3 KCNJ15 SCN8A KIAA1328 ASPM CEP295 ATM QSER1 CEP126 ERMARD USP27X NIPBL KDM1A ZNF292 BRWD1	2.00e-06	1257	158	26	facebase_RNAseq_e10.5_Emin_LatNas_2500_K3
CoexpressionAtlas	facebase_RNAseq_e10.5_MaxArch_2500_K3	AMD1 EYA4 ARID4A HIPK2 SEMA5A TSC22D2 SP110 RFX3 GFRA2 RIF1 DHDH ALMS1 BRCA2 WDCP GLI3 KCNJ15 ASPM CEP295 ATM QSER1 CEP126 USP27X NIPBL KDM1A ZNF292	6.01e-06	1252	158	25	facebase_RNAseq_e10.5_MaxArch_2500_K3
CoexpressionAtlas	DevelopingLowerUrinaryTract_e14.5_ bladder_emap-6668_k-means-cluster#1_top-relative-expression-ranked_1000	SEMA4F SH3RF1 ARID4A SEMA5A ARHGAP11A NCOR1 HECW2 GLI3 ZBTB21 USP27X ZNF292 BRWD1	1.24e-05	349	158	12	DevelopingLowerUrinaryTract_e14.5_ bladder_emap-6668_k1_1000
CoexpressionAtlas	DevelopingKidney_e15.5_cortic collect duct_emap-28132_top-relative-expression-ranked_1000	SMG1 RAPGEF6 MYCBP2 HIPK2 PELI1 SEMA5A ST14 TTLL7 CEP350 PPP2R3A CELSR1 WDCP ARID2 SCN8A PKHD1 FAM110C ZNF292 BRWD1	1.92e-05	774	158	18	gudmap_developingKidney_e15.5_cortic collect duct_1000
CoexpressionAtlas	DevelopingKidney_e15.5_anlage of loop of Henle_emap-31283_k-means-cluster#3_top-relative-expression-ranked_1000	SMG1 SH3RF1 MYCBP2 HIPK2 PELI1 SEMA5A CEP350 NCOR1 FAM193A WDCP ARID2 BRWD1	2.79e-05	379	158	12	gudmap_developingKidney_e15.5_1000_k3
CoexpressionAtlas	facebase_RNAseq_e10.5_Emin_LatNas_2500	EYA4 ARID4A DHX40 HIPK2 GFRA2 CEP350 RIF1 FAM193A DHDH ALMS1 BRCA2 GLI3 KCNJ15 SCN8A KIAA1328 ASPM CEP295 ATM QSER1 CEP126 ERMARD USP27X NIPBL KDM1A ZNF292 BRWD1	2.81e-05	1459	158	26	facebase_RNAseq_e10.5_Emin_LatNas_2500
CoexpressionAtlas	DevelopingLowerUrinaryTract_e14.5_ urethra_emap-30892_top-relative-expression-ranked_1000	SMG1 SEMA4F EYA4 CTTNBP2 MYCBP2 SZT2 KIF26B HIPK2 PELI1 SEMA5A PTGER2 ST14 GFRA2 CEP350 CELSR1 FAM193A WDCP GLI3	3.26e-05	806	158	18	gudmap_developingLowerUrinaryTract_e14.5_ urethra_1000
CoexpressionAtlas	DevelopingKidney_e15.5_cortic collect duct_emap-28132_top-relative-expression-ranked_500	SMG1 RAPGEF6 MYCBP2 HIPK2 PELI1 SEMA5A ST14 CEP350 CELSR1 ARID2 SCN8A PKHD1	3.69e-05	390	158	12	gudmap_developingKidney_e15.5_cortic collect duct_500
CoexpressionAtlas	facebase_RNAseq_e10.5_Emin_MedNas_2500_K1	EYA4 DHX40 HIPK2 RFX3 GFRA2 RIF1 DHDH ALMS1 BRCA2 WDCP GLI3 KCNJ15 SCN8A ASPM CEP295 ATM QSER1 CEP126 NIPBL ZNF292 BRWD1	4.05e-05	1060	158	21	facebase_RNAseq_e10.5_Emin_MedNas_2500_K1
CoexpressionAtlas	DevelopingLowerUrinaryTract_e14.5_ bladder_emap-6668_top-relative-expression-ranked_1000	SEMA4F SH3RF1 ARID4A SEMA5A ITGA1 ARHGAP11A PTGER2 AKAP12 TTLL7 NCOR1 HECW2 GLI3 PAFAH1B1 SCN7A ZBTB21 USP27X ZNF292 BRWD1	4.49e-05	826	158	18	DevelopingLowerUrinaryTract_e14.5_ bladder_emap-6668_1000
CoexpressionAtlas	DevelopingKidney_e15.5_anlage of loop of Henle_emap-31283_top-relative-expression-ranked_500	MYCBP2 SPP2 HIPK2 PELI1 SEMA5A CEP350 NCOR1 CELSR1 WDCP ARID2 SCN8A PKHD1	4.94e-05	402	158	12	gudmap_developingKidney_e15.5_anlage of loop of Henle_500
CoexpressionAtlas	FacebaseRNAseq_e8.5_Floor Plate_top-relative-expression-ranked_2500_k-means-cluster#1	ARID4A KIZ FASTKD2 RIF1 ALMS1 BRCA2 RAPGEF3 GLI3 ASPM CEP126 USP27X NIPBL ZNF292	5.11e-05	469	158	13	Facebase_RNAseq_e8.5_Floor Plate_2500_K1
CoexpressionAtlas	DevelopingLowerUrinaryTract_e14.5_ Genital tubercle M_emap-6706_k-means-cluster#5_top-relative-expression-ranked_1000	CTTNBP2 ARID4A KIF26B SEMA5A ICE1 COG3 TBC1D8B NCOR1 RIF1 SLC12A2 HECW2 PAFAH1B1 ZNF292	8.28e-05	492	158	13	gudmap_developingLowerUrinaryTract_e14.5_ Genital tubercle M_1000_k5
CoexpressionAtlas	FacebaseRNAseq_e10.5_Neural Epithelium Flanking Eminence_top-relative-expression-ranked_500_k-means-cluster#3	ARID4A RIF1 ALMS1 BRCA2 GLI3 ASPM CEP295 NIPBL	9.78e-05	192	158	8	Facebase_RNAseq_e10.5_Neural Epithelium Flanking Eminence_500_K3
CoexpressionAtlas	FacebaseRNAseq_e10.5_Maxillary Arch_top-relative-expression-ranked_1000_k-means-cluster#3	ARID4A KIF26B RNF213 RIF1 BRCA2 GLI3 CEP295 QSER1 USP27X NIPBL ZNF292 BRWD1	9.80e-05	432	158	12	Facebase_RNAseq_e10.5_Maxillary Arch_1000_K3
CoexpressionAtlas	DevelopingLowerUrinaryTract_e14.5_ Genital tubercle M_emap-6706_k-means-cluster#4_top-relative-expression-ranked_500	EYA4 KIF26B SEMA5A TBC1D8B NCOR1 RIF1 HECW2 PAFAH1B1 ZNF292	1.00e-04	247	158	9	gudmap_developingLowerUrinaryTract_e14.5_ Genital tubercle M_500_k4
CoexpressionAtlas	DevelopingLowerUrinaryTract_e14.5_ urethra_emap-30902_top-relative-expression-ranked_1000	SEMA4F EYA4 CTTNBP2 MYCBP2 KIF26B SLC5A9 PELI1 SEMA5A PTGER2 GFRA2 CEP350 FAM193A SLC12A2 WDCP KCNJ8 ASPM ZNF292	1.10e-04	806	158	17	DevelopingLowerUrinaryTract_e14.5_ urethra_emap-30902_1000
CoexpressionAtlas	DevelopingLowerUrinaryTract_e14.5_ urethra_emap-30892_k-means-cluster#2_top-relative-expression-ranked_1000	SMG1 EYA4 MYCBP2 HIPK2 PELI1 SEMA5A CEP350 FAM193A WDCP GLI3	1.20e-04	312	158	10	gudmap_developingLowerUrinaryTract_e14.5_ urethra_1000_k2
CoexpressionAtlas	facebase_RNAseq_e10.5_Emin_MedNas_2500	EYA4 DHX40 HIPK2 RFX3 GFRA2 RIF1 DHDH ALMS1 BRCA2 SYTL3 WDCP GLI3 FER1L4 KCNJ15 SCN8A ASPM PKHD1 CEP295 ATM QSER1 CEP126 NIPBL ZNF292 BRWD1	1.26e-04	1414	158	24	facebase_RNAseq_e10.5_Emin_MedNas_2500
CoexpressionAtlas	DevelopingKidney_e15.5_anlage of loop of Henle_emap-31283_k-means-cluster#3_top-relative-expression-ranked_500	MYCBP2 HIPK2 PELI1 SEMA5A CEP350 NCOR1 WDCP ARID2	1.34e-04	201	158	8	gudmap_developingKidney_e15.5_500_k3
CoexpressionAtlas	DevelopingKidney_e15.5_stage III -IV renal corpusc_emap-27945_k-means-cluster#4_top-relative-expression-ranked_500	MYCBP2 HIPK2 PELI1 SEMA5A PTGER2 WDCP	1.43e-04	106	158	6	gudmap_developingKidney_e15.5_stage III -IV renal corpusc_500_k4
CoexpressionAtlas	DevelopingLowerUrinaryTract_e14.5_ urogenital sinus_emap-5517_k-means-cluster#2_top-relative-expression-ranked_500	SMG1 EYA4 HIPK2 PELI1 SEMA5A PTGER2 CEP350 WDCP	1.76e-04	209	158	8	gudmap_developingLowerUrinaryTract_e14.5_ urogenital sinus_500_k2
CoexpressionAtlas	DevelopingLowerUrinaryTract_e14.5_ Genital tubercle_emap-6706_k-means-cluster#1_top-relative-expression-ranked_1000	HIPK2 PELI1 SEMA5A GFRA2 CEP350 FAM193A WDCP GLI3	1.76e-04	209	158	8	gudmap_developingLowerUrinaryTract_e14.5_ Genital tubercle_1000_k1
CoexpressionAtlas	DevelopingLowerUrinaryTract_e14.5_ urogenital sinus_emap-6689_k-means-cluster#2_top-relative-expression-ranked_1000	SMG1 EYA4 MYCBP2 PELI1 SEMA5A CEP350 RIF1 WDCP PAFAH1B1 ASPM	1.88e-04	330	158	10	DevelopingLowerUrinaryTract_e14.5_ urogenital sinus_emap-6689_k2_1000
CoexpressionAtlas	DevelopingKidney_e15.5_cortic collect duct_emap-28132_k-means-cluster#4_top-relative-expression-ranked_500	SMG1 MYCBP2 HIPK2 PELI1 SEMA5A CEP350 ARID2	2.23e-04	163	158	7	gudmap_developingKidney_e15.5_cortic collect duct_500_k4
CoexpressionAtlas	DevelopingLowerUrinaryTract_e14.5_ urethra_emap-30892_top-relative-expression-ranked_500	SEMA4F EYA4 CTTNBP2 KIF26B HIPK2 SEMA5A PTGER2 GFRA2 CEP350 FAM193A WDCP	2.43e-04	407	158	11	gudmap_developingLowerUrinaryTract_e14.5_ urethra_500
CoexpressionAtlas	DevelopingLowerUrinaryTract_e14.5_ urogenital sinus_emap-5517_top-relative-expression-ranked_200	SEMA4F KIF26B PELI1 SEMA5A PTGER2 GFRA2 CEP350	2.49e-04	166	158	7	gudmap_developingLowerUrinaryTract_e14.5_ urogenital sinus_200
CoexpressionAtlas	DevelopingLowerUrinaryTract_e14.5_ urogenital sinus_emap-5517_top-relative-expression-ranked_500	SMG1 SEMA4F EYA4 KIF26B HIPK2 PELI1 SEMA5A PTGER2 GFRA2 CEP350 WDCP	2.93e-04	416	158	11	gudmap_developingLowerUrinaryTract_e14.5_ urogenital sinus_500
CoexpressionAtlas	CD positive, T.8Nve.Sp.OT1, CD8+ CD45.1+, Spleen, avg-3	SEMA4F RAPGEF6 RNF213 PELI1 GPRIN3 ITGAE SYTL3 IKBKE ATM RPL7A	3.60e-04	358	158	10	GSM605909_500
CoexpressionAtlas	facebase_RNAseq_e10.5_MandArch_2500_K1	EYA4 PRDX4 HIPK2 FASTKD2 SP110 GFRA2 RIF1 ALMS1 BRCA2 GLI3 ARID2 ASPM CEP295 QSER1 CEP126 USP27X NIPBL RPL7A KDM1A ZNF292 BRWD1	3.61e-04	1241	158	21	facebase_RNAseq_e10.5_MandArch_2500_K1
CoexpressionAtlas	DevelopingLowerUrinaryTract_e14.5_ urogenital sinus_emap-6689_top-relative-expression-ranked_1000	SMG1 SEMA4F EYA4 MYCBP2 KIF26B PELI1 SEMA5A PTGER2 GFRA2 CEP350 RIF1 SLC12A2 WDCP PAFAH1B1 ASPM USP27X	4.08e-04	818	158	16	DevelopingLowerUrinaryTract_e14.5_ urogenital sinus_emap-6689_1000
CoexpressionAtlas	DevelopingLowerUrinaryTract_e14.5_ urogenital sinus_emap-5517_top-relative-expression-ranked_1000	SMG1 SEMA4F EYA4 MYCBP2 KIF26B HIPK2 PELI1 SEMA5A PTGER2 GFRA2 CEP350 FBXL16 FAM193A SLC12A2 WDCP GLI3	4.08e-04	818	158	16	gudmap_developingLowerUrinaryTract_e14.5_ urogenital sinus_1000
CoexpressionAtlas	DevelopingLowerUrinaryTract_e14.5_ urogenital sinus_emap-5517_top-relative-expression-ranked_100	KIF26B PELI1 SEMA5A PTGER2 GFRA2	4.59e-04	86	158	5	gudmap_developingLowerUrinaryTract_e14.5_ urogenital sinus_100
CoexpressionAtlas	FacebaseRNAseq_e10.5_Neural Epithelium Flanking Eminence_top-relative-expression-ranked_2500_k-means-cluster#5	ARID4A INPP5E KIZ COG3 ANKHD1 TMEM179B NCOR1 RIF1 FAM193A ALMS1 BRCA2 GLI3 ASPM CEP295 NIPBL ZNF292	4.84e-04	831	158	16	Facebase_RNAseq_e10.5_Neural Epithelium Flanking Eminence_2500_K5
CoexpressionAtlas	DevelopingKidney_e15.5_cortic collect duct_emap-28132_k-means-cluster#4_top-relative-expression-ranked_1000	SMG1 MYCBP2 HIPK2 PELI1 SEMA5A CEP350 PPP2R3A WDCP ARID2 ZNF292	5.18e-04	375	158	10	gudmap_developingKidney_e15.5_cortic collect duct_1000_k4
CoexpressionAtlas	DevelopingLowerUrinaryTract_e14.5_ Genital tubercle_emap-6706_k-means-cluster#2_top-relative-expression-ranked_500	HIPK2 PELI1 GFRA2 WDCP GLI3	5.37e-04	89	158	5	gudmap_developingLowerUrinaryTract_e14.5_ Genital tubercle_500_k2
CoexpressionAtlas	gamma delta T cells, Tgd.vg2-.act.Sp, TCRd+ Vg2- CD44+, Spleen, avg-3	RAPGEF6 GPRIN3 ITGA1 ITGA2 CELSR1 SLC12A2 SYTL3 IKBKE SCART1 IL2RA	5.39e-04	377	158	10	GSM476681_500
CoexpressionAtlas	DevelopingLowerUrinaryTract_e14.5_ urogenital sinus_emap-5517_k-means-cluster#4_top-relative-expression-ranked_1000	SMG1 EYA4 MYCBP2 HIPK2 PELI1 SEMA5A CEP350 FAM193A WDCP GLI3	6.34e-04	385	158	10	gudmap_developingLowerUrinaryTract_e14.5_ urogenital sinus_1000_k4
CoexpressionAtlas	DevelopingKidney_e15.5_Medullary collecting duct_emap-28063_k-means-cluster#4_top-relative-expression-ranked_1000	SMG1 RAPGEF6 MYCBP2 HIPK2 PELI1 CEP350 WDCP ARID2	7.72e-04	261	158	8	gudmap_developingKidney_e15.5_Medullary collecting duct_1000_k4
CoexpressionAtlas	gamma delta T cells, Tgd.vg2+.act.Sp, TCRd+ Vg2+ CD44+, Spleen, avg-3	SEMA4F GPRIN3 ITGA1 ITGA2 ITGAE CELSR1 SYTL3 IKBKE SCART1 IL2RA	7.72e-04	395	158	10	GSM476678_500
ToppCell	severe-low-quality_cells\|World / Cohort 1 (10x PBMC) with disease condition, cell group and cell class	SMG1 RNF213 GPRIN3 RFX3 AKAP12 CD84 KMT2C ATM IL2RA ZNF292	3.37e-09	197	164	10	57ebd552f10d6278623b52a3d484d4b91ae1d028
ToppCell	TCGA-Pancreas-Primary_Tumor-Pancreatic_Adenocarcinoma-Ductal_Adenocarcinoma-1\|TCGA-Pancreas / Sample_Type by Project: Shred V9	SMG1 ARID4A ITGA1 MAP3K1 CEP350 ALMS1 ARID2 MARF1 CEP295	3.17e-08	186	164	9	03db813598b67b1e08f759758a1c2023396921fa
ToppCell	10x5'-GI_small-bowel-Lymphocytic_T_CD4-T_CD4/CD8\|GI_small-bowel / Manually curated celltypes from each tissue	SMG1 RNF213 ZNF407 ITGA1 EPG5 CD84 KMT2C ARID2 NIPBL	3.47e-08	188	164	9	ab9b725d6e0cdab8e9ddda6dee09e14730e9a578
ToppCell	renal_cortex_nuclei-Hypertensive_with+without-CKD-Epithelial-Proximal_tubule_epithelial_cell-kidney_proximal_tubule_epithelial_cell-Adaptive_/_Maladaptive_/_Repairing_Proximal_Tubule_Epithelial_Cell\|Hypertensive_with+without-CKD / Celltypes from Cells and Nuclei per compartment and clinical group	FSTL3 KIF26B SEMA5A AKAP12 MAP3K1 TTLL7 KCNJ15 PKHD1 ATP11A	3.98e-08	191	164	9	1cb02007adb344f17ef73d58890f91298c7cf5a1
ToppCell	severe-low-quality_cells\|severe / Cohort 1 (10x PBMC) with disease condition, cell group and cell class	SMG1 RNF213 GPRIN3 RFX3 AKAP12 CD84 ATM ZNF292 BRWD1	4.35e-08	193	164	9	9337bc93e3904c7fc7c93c328518bcd6453b1e8c
ToppCell	moderate-Epithelial-FOXN4+\|moderate / Severity, Lineage and Cell class of Nasopharyngeal (NS) Samples from Patients and Controls	SEMA5A RFX3 ALMS1 BRCA2 FANCI ZBTB21 CEP295 CEP152 CEP126	4.55e-08	194	164	9	5dffa578149104dda33774361e9e77b227b5f1ce
ToppCell	mild\|World / Cohort 1 (10x PBMC) with disease condition, cell group and cell class	SMG1 MYCBP2 RNF213 SP110 CEP350 KMT2C ATM NIPBL ZNF292	5.91e-08	200	164	9	12f1685ce8f218433068e090c9d839cd5a1910bf
ToppCell	critical-Epithelial-FOXN4+\|Epithelial / Severity, Lineage and Cell class of Nasopharyngeal (NS) Samples from Patients and Controls	AMD1 SEMA5A ARHGAP11A CEP350 BRCA2 FANCI ZBTB21 CEP295 CEP152	5.91e-08	200	164	9	f39db4250ce220a3eb58edee3f7fc3671701d46f
ToppCell	10x5'-bone_marrow-Lymphocytic_T_CD4-T_CD4/CD8\|bone_marrow / Manually curated celltypes from each tissue	SMG1 RAPGEF6 RNF213 GPRIN3 KMT2C SYTL3 KIF4B ATM	1.20e-07	156	164	8	1545169694f686d28648a68b552c2ae606599d66
ToppCell	AT1_cells-HP_01\|World / lung cells shred on cell class, cell subclass, sample id	EYA4 FSTL3 ARID4A SEMA5A ITGA2 TTLL7 PLXNA1 SERTM1	3.04e-07	176	164	8	458720776b0151cd55acc352d509599cb62f0ca8
ToppCell	renal_medulla_nuclei-Adult_normal_reference-Epithelial-Intermediate_tubule_epithelial_cell-kidney_loop_of_Henle_thin_descending_limb_epithelial_cell\|Adult_normal_reference / Celltypes from Cells and Nuclei per compartment and clinical group	CTTNBP2 COL26A1 HIPK2 MAP3K1 CELSR1 TBC1D4 KCNJ15 PKHD1	4.08e-07	183	164	8	738e94b50c4c08c727d4eed0708dda08aa6891b4
ToppCell	renal_medulla_nuclei-Adult_normal_reference-Epithelial-Intermediate_tubule_epithelial_cell\|Adult_normal_reference / Celltypes from Cells and Nuclei per compartment and clinical group	CTTNBP2 COL26A1 HIPK2 MAP3K1 CELSR1 TBC1D4 KCNJ15 PKHD1	4.08e-07	183	164	8	92fbd83a9d13ee91065cbd479fb298f1fd564568
ToppCell	renal_cortex_nuclei-Adult_normal_reference-Epithelial-Proximal_tubule_epithelial_cell-kidney_proximal_tubule_epithelial_cell-Adaptive_/_Maladaptive_/_Repairing_Proximal_Tubule_Epithelial_Cell\|Adult_normal_reference / Celltypes from Cells and Nuclei per compartment and clinical group	FSTL3 KIF26B SEMA5A AKAP12 TTLL7 KCNJ15 PKHD1 ATP11A	5.22e-07	189	164	8	3b48b0d220cc24d5170713d61fa91f5bb6c21841
ToppCell	NS-moderate-d_16-33-Epithelial-FOXN4+\|d_16-33 / Location, Severity, dps_group, Lineage and Cell class of Upper airway (combined)	SEMA5A RFX3 ALMS1 BRCA2 FANCI ZBTB21 CEP295 CEP152	5.43e-07	190	164	8	250ca4a605c1cccd77d23383e4fe6f91cf3609ba
ToppCell	moderate-Epithelial-FOXN4+\|Epithelial / Severity, Lineage and Cell class of Nasopharyngeal (NS) Samples from Patients and Controls	CEP350 ALMS1 BRCA2 FANCI ZBTB21 ASPM CEP295 CEP152	6.36e-07	194	164	8	dff3fb10372053951d41e0ccd41aac3ece6009bd
ToppCell	10x_3'_v2v3-Non-neoplastic-Lymphoid-CD4/CD8-CD8_cytotoxic-C\|10x_3'_v2v3 / Platform, Oncotype, Lineage, Cell_class, celltype (level4), mutation group	RAPGEF6 MYCBP2 RNF213 ITGA1 ANKHD1 NCOR1 ACAD11 RMND1	6.61e-07	195	164	8	83c125223e7ca0f08a31414b3a16347912564765
ToppCell	critical-Epithelial-FOXN4+\|critical / Severity, Lineage and Cell class of Nasopharyngeal (NS) Samples from Patients and Controls	SEMA5A SLC12A2 BRCA2 FANCI ZBTB21 CEP295 CEP152 KDM1A	7.41e-07	198	164	8	6b160b3d6a2c1b1641c2c7dcec1a7ef38411fec9
ToppCell	PBMC_fresh-frozen-Severe-critical_progression_d12-22_with-steroid-Lymphocytic-Lymphocytic_T-mature_alpha-beta_T_cell-T_CD4_c03-ITGA4\|Severe-critical_progression_d12-22_with-steroid / Compartment, severity and other cell annotations on 10x 3' data (130k)	RAPGEF6 HIVEP1 GPRIN3 MAP3K1 TBC1D4 PLAT IL2RA	2.92e-06	167	164	7	ced6ed9b412739c6ced622523347c10295edbf53
ToppCell	3'_v3-lymph-node_spleen-Lymphocytic_T_CD4-T_CD4/CD8\|lymph-node_spleen / Manually curated celltypes from each tissue	SMG1 RAPGEF6 RNF213 ZNF407 GPRIN3 SYTL3 ATM	3.41e-06	171	164	7	2e9a20f8980b78325c52065a9c14ab3656267c05
ToppCell	PND10-Mesenchymal-Mesenchymal_structural-Fibroblastic-AF1-AF1_prolif\|PND10 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif	GFRA2 AKAP12 COLEC12 FBXL16 BRCA2 FANCI ADAMTS17	4.13e-06	176	164	7	d30241fb8119834d6e7b59efec3f92fc7a3d1247
ToppCell	CV-Severe-7\|CV / Virus stimulation, Condition and Cluster	SMG1 RNF213 ZNF407 ARHGAP11A ARID2 KCNJ5-AS1 IL2RA	4.13e-06	176	164	7	3de0c7d77210049e5616db21eed1490a17a5ec2d
ToppCell	CV-Severe-7\|Severe / Virus stimulation, Condition and Cluster	SMG1 RNF213 ZNF407 ARHGAP11A ARID2 KCNJ5-AS1 IL2RA	4.28e-06	177	164	7	82fdd6185b368f54f03de389427cbe3071d21a99
ToppCell	renal_medulla_nuclei-CKD+DKD_normotensive-Epithelial-Intermediate_tubule_epithelial_cell-kidney_loop_of_Henle_thin_descending_limb_epithelial_cell\|CKD+DKD_normotensive / Celltypes from Cells and Nuclei per compartment and clinical group	CTTNBP2 COL26A1 HIPK2 MAP3K1 TBC1D4 KCNJ15 PKHD1	4.45e-06	178	164	7	c20f050344a2e120e685e2a7fe36c6dfc1dc37b6
ToppCell	COVID-19-kidney-Epi_(Mes)\|COVID-19 / Disease (COVID-19 only), tissue and cell type	DCHS2 CTTNBP2 COL26A1 KIF26B PPP2R3A RAPGEF3 PKHD1	4.45e-06	178	164	7	544379f5a6145429762258d426b876bb36c112f5
ToppCell	severe-Myeloid-Eosinophils\|Myeloid / Cohort 2 (Rhapsody WB + PBMC) with disease condition, lineage and cell classs	AKAP12 TTLL7 CD84 SYTL3 SCN7A IL2RA IL5RA	4.78e-06	180	164	7	ac03812b1409435c55d323a7516deeac82bd3509
ToppCell	renal_medulla_nuclei-Adult_normal_reference-Epithelial-Intermediate_tubule_epithelial_cell-kidney_loop_of_Henle_thin_descending_limb_epithelial_cell-Descending_Thin_Limb_Cell_Type_1\|Adult_normal_reference / Celltypes from Cells and Nuclei per compartment and clinical group	CTTNBP2 COL26A1 HIPK2 CELSR1 TBC1D4 KCNJ15 PKHD1	4.96e-06	181	164	7	071f9bb5d39070cdc473d9b0e094d196bc702b56
ToppCell	renal_medulla_nuclei-Renal_AKI_(acute_kidney_injury)-Epithelial-Intermediate_tubule_epithelial_cell-kidney_loop_of_Henle_thin_descending_limb_epithelial_cell-Descending_Thin_Limb_Cell_Type_1\|Renal_AKI_(acute_kidney_injury) / Celltypes from Cells and Nuclei per compartment and clinical group	CTTNBP2 COL26A1 HIPK2 MAP3K1 CELSR1 TBC1D4 PKHD1	5.53e-06	184	164	7	da06ff24ee2b2cf4715fdfce43030b2da9e0aaf8
ToppCell	COVID-19-Heart-Pericyte\|Heart / Disease (COVID-19 only), tissue and cell type	SH3RF1 HIPK2 GPRIN3 SEMA5A ITGA1 SLC12A2 KCNJ8	5.53e-06	184	164	7	21790cdfa3b4036ad413fd44b94e31563116f25f
ToppCell	nucseq-Immune-Immune_Myeloid-Myeloid_Dendritic-maDC\|nucseq / Celltype signatures by Technology, Lineage, Lineage_subclass, Celltype_group, Cell_type2	DLGAP2 EYA4 HIVEP1 PELI1 TBC1D4 CD40 IL2RA	5.73e-06	185	164	7	7e3d9f5050e71e91021245c11101e994ae41d22b
ToppCell	LA-07._Pericyte\|LA / Chamber and Cluster_Paper	SH3RF1 HIPK2 GPRIN3 SEMA5A ITGA1 SLC12A2 KCNJ8	5.73e-06	185	164	7	ba5baa4d7f097108622674de5b7f4fd279843d24
ToppCell	droplet-Bladder-nan\|Bladder / Skin_Bladder_Kidney_Mammary_Gland - method, tissue, subtissue, age, lineage, cell ontology and free annotation	MYCBP2 ITGA2 ANKHD1 NCOR1 PAFAH1B1 NIPBL ALPL	6.15e-06	187	164	7	663991a8afe652e92363b64bcbd68c14d0307f0e
ToppCell	renal_cortex_nuclei-Renal_AKI_(acute_kidney_injury)-Epithelial-Proximal_tubule_epithelial_cell-kidney_proximal_tubule_epithelial_cell-Adaptive_/_Maladaptive_/_Repairing_Proximal_Tubule_Epithelial_Cell\|Renal_AKI_(acute_kidney_injury) / Celltypes from Cells and Nuclei per compartment and clinical group	SEMA5A AKAP12 TTLL7 CELSR1 KCNJ15 PKHD1 ATP11A	6.15e-06	187	164	7	9d77ca45f7563bd6f2a0c1be5d99d93ad30983f7
ToppCell	BALF-PFMC-Severe-critical_progression_d12-22_with-steroid-Lymphocytic-Lymphocytic_T-mature_alpha-beta_T_cell-T_CD4_c03-ITGA4\|Severe-critical_progression_d12-22_with-steroid / Compartment, severity and other cell annotations on 10x 3' data (130k)	PHF12 PELI1 GPRIN3 MAP3K1 FURIN KIAA1328 ZNF292	6.82e-06	190	164	7	91ba66d4b56c59523485b17738e93f14bb00afa4
ToppCell	PBMC-Severe-Myeloid-Neutrophil-Neutrophil-Neu_4\|Severe / Location, Disease Group, Cell group, Cell class and sub_cluster (2021.03.09)	ZSWIM8 RBM44 SIGLEC14 FASTKD2 BRCA2 KCNJ15 ASPM	6.82e-06	190	164	7	3f0c7d130f66faea778fe567604edf1b4cdf85b3
ToppCell	COPD-Lymphoid-T_Regulatory\|Lymphoid / Disease state, Lineage and Cell class	RAPGEF6 HIVEP1 PELI1 GPRIN3 TBC1D4 IL2RA ZNF292	7.06e-06	191	164	7	3ae18bc4e3dff49b5d5958da8ebc3f747274b69c
ToppCell	RV-08._Macrophage\|World / Chamber and Cluster_Paper	RNF213 PELI1 CD84 COLEC12 BRCA2 ASPM IL2RA	7.30e-06	192	164	7	a1b5dc5beb97a23729b97b54fb4574d10d8fbfb3
ToppCell	10x5'-lymph-node_spleen-Lymphocytic_T_CD4-T_CD4/CD8\|lymph-node_spleen / Manually curated celltypes from each tissue	SMG1 RAPGEF6 RNF213 GPRIN3 KMT2C SYTL3 ATM	7.30e-06	192	164	7	47646d7e4990be85072987f92bf18d52f8da752e
ToppCell	PBMC-Severe-Myeloid-Neutrophil-Neutrophil-Neu_4\|Severe / Location, Disease Group, Cell group, Cell class and sub_cluster (2021.03.01)	ZSWIM8 RBM44 SIGLEC14 FASTKD2 BRCA2 KCNJ15 ASPM	7.30e-06	192	164	7	c09dcc73ff9c3855a0f3d7bfa0d5c99c09a117f2
ToppCell	human_hepatoblastoma\|World / Sample and Cell Type and Tumor Cluster (all cells)	HIVEP1 KIZ RFX3 ARID2 AFDN NIPBL ZNF292	7.55e-06	193	164	7	e6a688bc834f845ff64dae1be64f073eec5091a1
ToppCell	NS-moderate-d_16-33-Lymphoid-CTL\|d_16-33 / Location, Severity, dps_group, Lineage and Cell class of Upper airway (combined)	RNF213 GPRIN3 ITGA1 ITGAE CD84 SYTL3 ATM	7.81e-06	194	164	7	6b2bb3dd11fd53fa9ab4d66c18b0714f96f99288
ToppCell	normal_Lung-Epithelial_cells-AT2\|Epithelial_cells / Location, Cell class and cell subclass	SECISBP2L COLEC12 KCNJ8 KCNJ15 ATP11A DCXR ALPL	8.08e-06	195	164	7	81e13fe337f1d0a83d0deb86a0df797d306cd24d
ToppCell	3'-Parenchyma_lung-Epithelial-Alveolar_epithelium-type_I_pneumocyte-AT1\|3' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5	FSTL3 SLC5A9 TTLL7 AFDN ATP11A PLXNA1 SERTM1	8.08e-06	195	164	7	68f4cc84b5ae7f4159b780c78e4b66c94211779a
ToppCell	3'-Parenchyma_lung-Epithelial-Alveolar_epithelium-type_I_pneumocyte\|3' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5	FSTL3 SLC5A9 TTLL7 AFDN ATP11A PLXNA1 SERTM1	8.08e-06	195	164	7	2a1863f4b9fe73c30b0b1acf9b12fc98ef65040f
ToppCell	distal-Hematologic-Plasma-1\|distal / Location, Lineage, Cell class (ontology) and Donor from 10X sequencing (macrophage renamed)	NUP210L PRDX4 TTLL7 KISS1R FER1L4 DPEP3 IL5RA	8.35e-06	196	164	7	8201aded3c7109fae5e6ca12bac2076acc7bf070
ToppCell	Brain_organoid-organoid_Paulsen_bioRxiv-3.5_mon-Proliferating-Cycling_Progenitors\|3.5_mon / Sample Type, Dataset, Time_group, and Cell type.	ITGA2 ARHGAP11A BRCA2 FANCI GLI3 ASPM CEP152	8.35e-06	196	164	7	5905f0e3061a6b98b7a33d64c782c3dda2cd51ef
ToppCell	Epithelial_cells-AT1_cells\|Epithelial_cells / lung cells shred on cell class, cell subclass, sample id	EYA4 FSTL3 ARID4A SEMA5A TTLL7 PLXNA1 SERTM1	8.35e-06	196	164	7	6c99d29162848161c1f166a032320f87a5d5a631
ToppCell	3'-Parenchyma_lung-Epithelial-Alveolar_epithelium-type_I_pneumocyte-AT1-AT1_L.0.5.0.0\|3' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5	FSTL3 SLC5A9 TTLL7 AFDN ATP11A PLXNA1 SERTM1	8.35e-06	196	164	7	eb68f7954e7c2f86d05e740e95b6e74805a6053f
ToppCell	mild-low-quality_cells\|mild / Cohort 1 (10x PBMC) with disease condition, cell group and cell class	PLXNA3 SMG1 ZNF507 RNF213 GPRIN3 ATM ZNF292	8.63e-06	197	164	7	e4331969bd911d1ebb5453f40a7057297b5389b4
ToppCell	356C-Epithelial_cells-Epithelial-I_(AT1)-\|Epithelial_cells / Donor, Lineage, Cell class and subclass (all cells)	EYA4 FSTL3 SEMA5A ITGA2 TTLL7 PLXNA1 SERTM1	8.63e-06	197	164	7	69d5b8588046d119b5dff9a7fd6f49e97e00a5b7
ToppCell	356C-Epithelial_cells-Epithelial-I_(AT1)\|Epithelial_cells / Donor, Lineage, Cell class and subclass (all cells)	EYA4 FSTL3 SEMA5A ITGA2 TTLL7 PLXNA1 SERTM1	8.63e-06	197	164	7	e6cbfa267eb2e05b441fd034786faae07bb0e081
ToppCell	5'-GW_trimst-2-SmallIntestine-Mesenchymal-fibroblastic-Stromal_3_(KCNN3+)\|GW_trimst-2 / Celltypes from developing, pediatric, Crohn's, & adult GI tract	DCHS2 GFRA2 COLEC12 HMCN2 KCNJ8 SCN7A PLAT	8.92e-06	198	164	7	12cd9f0bbad8dce5199ebfed1c4a8080710ca055
ToppCell	Tracheal-NucSeq-Epithelial-Epi_airway_basal\|NucSeq / Cell types per location group and 10X technology with lineage, and cell group designations	EYA4 OBSCN SEMA5A ITGA2 CELSR1 GLI3 KCNJ15	8.92e-06	198	164	7	5374b0e98d669f36a0571d3c006c7bd5e3c8e87f
ToppCell	mild-low-quality_cells\|World / Cohort 1 (10x PBMC) with disease condition, cell group and cell class	SMG1 RNF213 ZNF407 GPRIN3 SYTL3 ATM ZNF292	9.22e-06	199	164	7	f0b0097df0026496470a80d8cc9375ffd8389b00
ToppCell	Tracheal-NucSeq-Epithelial-Epi_airway_basal-Basal\|NucSeq / Cell types per location group and 10X technology with lineage, and cell group designations	EYA4 OBSCN SEMA5A ITGA2 CELSR1 GLI3 KCNJ15	9.22e-06	199	164	7	94a7867e800df352731796de8c24cba133c29622
ToppCell	kidney_cells-CKD+DKD_normotensive-Epithelial-Proximal_tubule_epithelial_cell-kidney_proximal_tubule_epithelial_cell-Adaptive_/_Maladaptive_/_Repairing_Proximal_Tubule_Epithelial_Cell\|CKD+DKD_normotensive / Celltypes from Cells and Nuclei per compartment and clinical group	CTTNBP2 SEMA5A ITGA1 AKAP12 TTLL7 PKHD1 AFDN	9.22e-06	199	164	7	174f6013af6eafa577f84205a62927f2b367fda3
ToppCell	Smart-start-Cell-Wel_seq-Non-neoplastic-Myeloid-TAM-BDM-TAM-BDM_INF-Z\|Smart-start-Cell-Wel_seq / Platform, Oncotype, Lineage, Cell_class, celltype (level4), mutation group	SIGLEC14 GPRIN3 TBC1D8B CD84 IKBKE KIAA1328	1.45e-05	142	164	6	f720f13b339589fa924a42e89393e5db0b26300b
ToppCell	Smart-seq2-lymph_node_(Smart-seq2)-myeloid-myeloid_granulocytic\|lymph_node_(Smart-seq2) / Per Platform+tissue_group, by lineage_subgroup, cell_group, cell_type	CTTNBP2 AKAP12 TTLL7 SCN7A PLAT ADAMTSL4	2.14e-05	152	164	6	32634195048858ae84605c61e43c542d90f7cab5
ToppCell	Smart-seq2-lymph_node_(Smart-seq2)-myeloid-myeloid_granulocytic-mast_cell\|lymph_node_(Smart-seq2) / Per Platform+tissue_group, by lineage_subgroup, cell_group, cell_type	CTTNBP2 AKAP12 TTLL7 SCN7A PLAT ADAMTSL4	2.14e-05	152	164	6	0eb185b2404f015efff1bd140e0c502d714720fb
ToppCell	AT1-AT2_cells-SSc-ILD_02\|World / lung cells shred on cell class, cell subclass, sample id	EYA4 FSTL3 SLC5A9 SEMA5A ITGA2 SERTM1	2.39e-05	155	164	6	010e45ef4b505bf419ea41e4d1619521d1c78319
ToppCell	renal_cortex_nuclei-Hypertensive_with+without-CKD-Endothelial-blood_vessel_endothelial_cell_of_kidney-capillary-immature_endothelial_cell-Cycling_Endothelial_Cell\|Hypertensive_with+without-CKD / Celltypes from Cells and Nuclei per compartment and clinical group	ARHGAP11A GFRA2 BRCA2 FANCI ASPM KIF4B	2.39e-05	155	164	6	969fc4c98a96bf2f436e8e63d4deb2183ef3b864
ToppCell	droplet-Liver-Hepatocytes-24m-Myeloid-Kupffer_cell\|Liver / Large_Intestine_Pancreas_Liver - method, tissue, subtissue, age, lineage, cell ontology and free annotation	RBM44 PTGER2 GFRA2 COLEC12 SLC12A2 PLXNA1	3.17e-05	163	164	6	8dc0128eeede933537e3bcc5d6ec0322711552f3
ToppCell	droplet-Liver-Hepatocytes-24m-Myeloid-Kupffer_cell\|Liver / Large_Intestine_Pancreas_Liver - method, tissue, subtissue, age, lineage, cell ontology and free annotation	RBM44 PTGER2 GFRA2 COLEC12 SLC12A2 PLXNA1	3.17e-05	163	164	6	fd243ca223079033be480a24817a399f281fa4d4
ToppCell	droplet-Lung-3m-Mesenchymal-fibroblast-adventitial_fibroblast-adventitial_fibroblast_l49\|3m / method, tissue, age, lineage, sublineage, cell ontologies, cell type and subtype	OBSCN COLEC12 GLI3 KCNJ8 SCN7A ALPL	3.75e-05	168	164	6	d2b91f2adc95dcfa623f8d7ca2df1c6f884da988
ToppCell	5'-Adult-Appendix-Hematopoietic-T_cells-TRGV2_gdT\|Adult / Celltypes from developing, pediatric, Crohn's, & adult GI tract	ITGA1 ITGAE PTGER2 SYTL3 ADAMTS17 ERMARD	3.88e-05	169	164	6	8caf7996796a2e2716e3855de855c903d6126bf2
ToppCell	PBMC_fresh-frozen-Mild-Moderate_progression_d12-25-Lymphocytic-Lymphocytic_T-mature_alpha-beta_T_cell-T_CD4_c04-ANXA2\|Mild-Moderate_progression_d12-25 / Compartment, severity and other cell annotations on 10x 3' data (130k)	GPRIN3 PTGER2 EPG5 FBXL16 FURIN AFDN	3.88e-05	169	164	6	01a24a8817628125bd004b2be68ffa62c7111f6e
ToppCell	3'-Parenchyma_lung-Epithelial-Alveolar_epithelium-type_I_pneumocyte-AT1-AT1_L.0.5.1.0\|3' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5	FSTL3 SLC5A9 TTLL7 AFDN PLXNA1 SERTM1	3.88e-05	169	164	6	cd16e8462ee09877be962fbd9a3badcb825820b0
ToppCell	renal_medulla_nuclei-Adult_normal_reference-Epithelial-Intermediate_tubule_epithelial_cell-kidney_loop_of_Henle_thin_descending_limb_epithelial_cell-Descending_Thin_Limb_Cell_Type_3\|Adult_normal_reference / Celltypes from Cells and Nuclei per compartment and clinical group	CTTNBP2 COL26A1 KIF26B MAP3K1 KCNJ15 PKHD1	4.01e-05	170	164	6	5d5f208682be21ed58320f5fc083a7898f8712da
ToppCell	normal-na-Lymphocytic_T-T4_em-male\|normal / PBMC cell types (v2) per disease, treatment status, and sex	GPRIN3 SEMA5A ARHGAP11A AKAP12 AFDN IL2RA	4.14e-05	171	164	6	61318a7aaf3bd8bdd28f8a8614ab4fdf2964b3a3
ToppCell	droplet-Trachea-3m-Endothelial-endothelial_cell_of_trachea-tracheal_endothelial_cell-tracheal_endothelial_cell_28\|3m / method, tissue, age, lineage, sublineage, cell ontologies, cell type and subtype	NUP210L ITGA2 FBXL16 RAPGEF3 HECW2 ALPL	4.42e-05	173	164	6	66488d01e03264fb193285470901c9c4182fbae8
ToppCell	5'-Parenchyma_lung-Immune_Myeloid-Myeloid_macrophage-alveolar_macrophage-Alveolar_macrophages-Alveolar_macrophages_L.1.0.5.0\|5' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5	MYO9B NUP210L SIGLEC14 RNF213 GPRIN3 ADAMTSL4	4.56e-05	174	164	6	d5c22b43531414951666ee7542a66ed9380e2d14
ToppCell	Control-Epithelial_cells-AT1\|Control / group, cell type (main and fine annotations)	EYA4 SH3RF1 SEMA5A TTLL7 AFDN ATP11A	4.56e-05	174	164	6	548d7f2b958a2bfd2c95eb049ceaab55a559c77d
ToppCell	368C-Lymphocytic-CD4_T-cell-Treg_cell_1\|Lymphocytic / Donor, Lineage, Cell class and subclass (all cells)	INPP5E ASPHD2 FBXL16 KIAA1328 ASPM DHX34	4.56e-05	174	164	6	58300d64d3b6fd9ba1b6c87ea83b2777eb6be2f4
ToppCell	facs-Marrow-Granulocytes-3m-Myeloid-basophil\|Marrow / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation	ITGA1 ST14 TBC1D4 SYTL3 HECW2 FAM110C	4.71e-05	175	164	6	1b35acece23712ab7e3f92d9d68266efd38b3ef5
ToppCell	Dividing_Macrophages-IPF_03\|World / lung cells shred on cell class, cell subclass, sample id	DLGAP2 BRCA2 FANCI ASPM CEP295 IGKV1D-33	4.71e-05	175	164	6	0a8bf455babb3271aa00642199fb58b0b02dc3ac
ToppCell	facs-Marrow-Granulocytes-3m-Myeloid-basophil\|Marrow / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation	ITGA1 ST14 TBC1D4 SYTL3 HECW2 FAM110C	4.71e-05	175	164	6	a9f88054e2c28d604c65ed785f63021aadb7f4c8
ToppCell	renal_medulla_nuclei-Hypertensive_with+without-CKD-Epithelial-Intermediate_tubule_epithelial_cell-kidney_loop_of_Henle_thin_descending_limb_epithelial_cell\|Hypertensive_with+without-CKD / Celltypes from Cells and Nuclei per compartment and clinical group	CTTNBP2 COL26A1 HIPK2 MAP3K1 TBC1D4 PKHD1	4.86e-05	176	164	6	327a3e81b724252e36d786de92a3ffd721ea6d7b
ToppCell	droplet-Thymus-nan-21m-Lymphocytic-DN3_thymocyte\|Thymus / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation	SLC5A9 EPG5 TBC1D4 RAPGEF3 ADAMTS17 IL2RA	4.86e-05	176	164	6	d43d9e86c4d4fa1e88fbf2b899ac7143717aac90
ToppCell	renal_medulla_nuclei-Hypertensive_with+without-CKD-Epithelial-Intermediate_tubule_epithelial_cell-kidney_loop_of_Henle_thin_descending_limb_epithelial_cell-Descending_Thin_Limb_Cell_Type_1\|Hypertensive_with+without-CKD / Celltypes from Cells and Nuclei per compartment and clinical group	CTTNBP2 COL26A1 HIPK2 CELSR1 TBC1D4 PKHD1	5.02e-05	177	164	6	da8802a6351d3e510822f82e2fde8a4314a2216e
ToppCell	facs-Marrow-T-cells-3m-Myeloid-basophil\|Marrow / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation	ITGA1 ITGA2 ST14 TBC1D4 SYTL3 FAM110C	5.18e-05	178	164	6	41745a589567ca5ea6d06331f4c8da03595b5f5c
ToppCell	facs-Marrow-T-cells-3m-Myeloid-basophil\|Marrow / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation	ITGA1 ITGA2 ST14 TBC1D4 SYTL3 FAM110C	5.18e-05	178	164	6	eb940dd64c973f68bcaad6069d3bd56383329db5
ToppCell	droplet-Tongue-nan-24m-Myeloid-nan\|Tongue / Tongue_Heart_Limb_Muscle_Aorta_Diaphragm - method, tissue, subtissue, age, lineage, cell ontology and free annotation	SEMA4F ITGAE PTGER2 SP110 CD84 SYTL3	5.34e-05	179	164	6	1b079d80f789473701c781f3431ad306e9766797
ToppCell	AT1_cells-Cryobiopsy_01\|World / lung cells shred on cell class, cell subclass, sample id	EYA4 FSTL3 SEMA5A TTLL7 PLXNA1 SERTM1	5.34e-05	179	164	6	1603117b52623663458a977c94bf7f9f6c1114b8
ToppCell	droplet-Spleen-SPLEEN-30m-Lymphocytic-T_cell\|Spleen / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation	RAPGEF6 PELI1 GPRIN3 PTGER2 TBC1D4 IKBKE	5.51e-05	180	164	6	978728c89497d26287f73974fb738ad9fde61415
ToppCell	droplet-Marrow-nan-21m-Lymphocytic-naive_B_cell\|Marrow / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation	ITGA2 ST14 TBC1D4 SYTL3 RAPGEF3 HECW2	5.51e-05	180	164	6	41e8155cc7b3dac9d496e4077845ca6af1591a5c
ToppCell	renal_papilla_nuclei-Adult_normal_reference-Epithelial-Intermediate_tubule_epithelial_cell-kidney_loop_of_Henle_thin_descending_limb_epithelial_cell\|Adult_normal_reference / Celltypes from Cells and Nuclei per compartment and clinical group	CTTNBP2 COL26A1 HIPK2 MAP3K1 KCNJ15 PKHD1	5.68e-05	181	164	6	9d782ba5cf5a172cb4f447763fc50e5b13ef7dd9
ToppCell	10x5'-Liver-Lymphocytic_T_CD4-T_CD4/CD8\|Liver / Manually curated celltypes from each tissue	SMG1 RAPGEF6 RNF213 GPRIN3 ARID2 ATM	5.68e-05	181	164	6	f2315414e714ac86211546a935660c4be6e85f1b
ToppCell	renal_cortex_nuclei-Adult_normal_reference-Epithelial-Renal_corpuscle_epithelial_cell-parietal_epithelial_cell\|Adult_normal_reference / Celltypes from Cells and Nuclei per compartment and clinical group	DCHS2 CTTNBP2 COL26A1 KIF26B ITGA1 RAPGEF3	5.68e-05	181	164	6	5f2d3a08577c440c944778d07aa993c6e7873f3d
ToppCell	renal_cortex_nuclei-Adult_normal_reference-Epithelial-Renal_corpuscle_epithelial_cell-parietal_epithelial_cell-Parietal_Epithelial_Cell\|Adult_normal_reference / Celltypes from Cells and Nuclei per compartment and clinical group	DCHS2 CTTNBP2 COL26A1 KIF26B ITGA1 RAPGEF3	5.68e-05	181	164	6	c7c5f7d4c397b4613c772413a0a679377efffff3
ToppCell	renal_medulla_nuclei-Hypertensive_with+without-CKD-Epithelial-Intermediate_tubule_epithelial_cell-kidney_loop_of_Henle_thin_descending_limb_epithelial_cell-Descending_Thin_Limb_Cell_Type_2\|Hypertensive_with+without-CKD / Celltypes from Cells and Nuclei per compartment and clinical group	CTTNBP2 COL26A1 SEMA5A MAP3K1 TBC1D4 PKHD1	5.86e-05	182	164	6	5e1b316599436740f1b30875f0ebd33c3edfb2b6
ToppCell	renal_papilla_nuclei-Adult_normal_reference-Epithelial-Intermediate_tubule_epithelial_cell-kidney_loop_of_Henle_thin_descending_limb_epithelial_cell-Descending_Thin_Limb_Cell_Type_3\|Adult_normal_reference / Celltypes from Cells and Nuclei per compartment and clinical group	CTTNBP2 COL26A1 HIPK2 MAP3K1 KCNJ15 PKHD1	5.86e-05	182	164	6	eb138aa1dca9373f1586600f258df06dcf56d81f
ToppCell	343B-Lymphocytic-CD4_T-cell-Treg_cell_1\|Lymphocytic / Donor, Lineage, Cell class and subclass (all cells)	HIVEP1 MRPL53 TBC1D4 FAM193A LRRC37B COG4	6.04e-05	183	164	6	807d64deaf4e50dccf6f831f88578a6d903c1421
ToppCell	LA-07._Pericyte\|World / Chamber and Cluster_Paper	SH3RF1 GPRIN3 SEMA5A ITGA1 SLC12A2 KCNJ8	6.04e-05	183	164	6	e3835db4795362b0442d5893baf2a78efcc20428
ToppCell	Calu_3-infected\|Calu_3 / Cell line, Condition and Strain	RNF213 SP110 CEP350 KMT2C RIF1 ZNF292	6.04e-05	183	164	6	8f7f5000645f24f20a8d7700c4df1f8953a1780b
ToppCell	LV-07._Pericyte\|World / Chamber and Cluster_Paper	SH3RF1 GPRIN3 SEMA5A SLC12A2 KCNJ8 SCN7A	6.04e-05	183	164	6	273db6a3b00a93ca852498471187b642b5368185
ToppCell	renal_cortex_nuclei-Adult_normal_reference-Epithelial-Intermediate_tubule_epithelial_cell-kidney_loop_of_Henle_thin_descending_limb_epithelial_cell-Descending_Thin_Limb_Cell_Type_1\|Adult_normal_reference / Celltypes from Cells and Nuclei per compartment and clinical group	CTTNBP2 COL26A1 HIPK2 PTGER2 MAP3K1 TBC1D4	6.04e-05	183	164	6	cfae90c309622b5d499e62a3a8a8b9746478d28d
ToppCell	NS-critical-d_0-4-Lymphoid-Treg\|d_0-4 / Location, Severity, dps_group, Lineage and Cell class of Upper airway (combined)	ZNF507 GPRIN3 ITGA1 FBXL16 ATM IL2RA	6.04e-05	183	164	6	f478dfa231fc1b12ead0183cc9d22077cdf43d1f
ToppCell	nucseq-Epithelial-Epithelial_Alveolar-AT1-AT1\|nucseq / Celltype signatures by Technology, Lineage, Lineage_subclass, Celltype_group, Cell_type2	EYA4 SH3RF1 SEMA5A TTLL7 AFDN ATP11A	6.22e-05	184	164	6	57c792e6e2fedba25d3350ffe649fd74750b579d
ToppCell	droplet-Marrow-nan-3m\|Marrow / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation	SMG1 MYCBP2 AKAP12 CEP350 NCOR1 NIPBL	6.22e-05	184	164	6	1154a5ad7b8512272b7476f949ddac350910bfb7
ToppCell	control-Myeloid-Eosinophils\|Myeloid / Cohort 2 (Rhapsody WB + PBMC) with disease condition, lineage and cell classs	AKAP12 TTLL7 CD84 SYTL3 IL2RA IL5RA	6.22e-05	184	164	6	fad517d047e8eaeaa5bd4f311d770880568dd13c
ToppCell	PBMC_fresh-frozen-Severe-critical_progression_d03-09-Lymphocytic-Lymphocytic_T-mature_alpha-beta_T_cell-T_CD4_c01-LEF1\|Severe-critical_progression_d03-09 / Compartment, severity and other cell annotations on 10x 3' data (130k)	RAPGEF6 ZNF507 OBSCN GPRIN3 TBC1D4 ATM	6.22e-05	184	164	6	5350b58aa9979631228835d11eb45ddf81d08bff
Computational	Genes upregulated in subsets of cells of a given type within various tumors	SMG1 GPRIN3 CEP350 ATM ZNF292	8.28e-05	49	99	5	GAVISH_3CA_METAPROGRAM_CD8_T_CELLS_CHROMATIN
Drug	17-AAG; Down 200; 1uM; MCF7; HT_HG-U133A	GPR137 SEMA4F FSTL3 MYCBP2 MED16 TBC1D4 IKBKE WDCP ATP11A ATM DHX34	1.53e-07	198	159	11	1650_DN
Disease	Malignant neoplasm of breast	OBSCN COG3 ARHGAP11A SP110 AKAP12 MAP3K1 EPG5 PPP1R3A NCOR1 RIF1 KRT76 BRCA2 WDCP KCNJ15 CD40 ATM RMND1 NIPBL	2.10e-05	1074	159	18	C0006142
Disease	cortical surface area measurement	DCHS2 CTTNBP2 COL26A1 MYCBP2 MYO9B KIF26B INPP5E HIPK2 SEMA5A TSC22D2 MAP3K1 COLEC12 NCOR1 CELSR1 ACAD11 GLI3 PAFAH1B1 PKHD1 QSER1 KDM1A	3.93e-05	1345	159	20	EFO_0010736
Disease	Hypopigmentation disorder	EPG5 GLI3	8.63e-05	3	159	2	C0162835
Disease	prostate carcinoma	SH3RF1 MYO9B PRR20G RNF213 RFX3 GFRA2 MAP3K1 CEP350 RIF1 PKHD1 CEP152 ATM QSER1 KLKB1 ADAMTSL4	1.01e-04	891	159	15	EFO_0001663
Disease	cortical thickness	EYA4 CTTNBP2 COL26A1 MYCBP2 NUP210L INPP5E TSC22D2 MAD2L1BP GFRA2 MAP3K1 CELSR1 GLI3 FURIN PAFAH1B1 KCTD3 PKHD1 QSER1	1.12e-04	1113	159	17	EFO_0004840
Disease	Prostatic Neoplasms	ARID4A ST14 MAP3K1 NCOR1 KMT2C DHDH SLC12A2 BRCA2 ARID2 ATM DCXR ZNF292	1.36e-04	616	159	12	C0033578
Disease	Malignant neoplasm of prostate	ARID4A ST14 MAP3K1 NCOR1 KMT2C DHDH SLC12A2 BRCA2 ARID2 ATM DCXR ZNF292	1.36e-04	616	159	12	C0376358
Disease	colorectal cancer, inflammatory bowel disease	DLGAP2 SP110 ALMS1	1.40e-04	19	159	3	EFO_0003767, MONDO_0005575
Disease	von Willebrand's disease 1 (is_implicated_in)	ITGA2 PLAT	1.72e-04	4	159	2	DOID:0060573 (is_implicated_in)
Disease	Impaired glucose tolerance	PRDX4 SLC12A2 RAPGEF3	3.24e-04	25	159	3	C0271650
Disease	Miller Dieker syndrome	BRCA2 FANCI PAFAH1B1	5.06e-04	29	159	3	C0265219
Disease	infertility (implicated_via_orthology)	BRCA2 ATM	5.95e-04	7	159	2	DOID:5223 (implicated_via_orthology)
Disease	neuroimaging measurement	SECISBP2L DCHS2 CTTNBP2 COL26A1 SZT2 KIF26B TSC22D2 MAP3K1 NCOR1 CELSR1 ACAD11 GLI3 FURIN PKHD1 QSER1	6.96e-04	1069	159	15	EFO_0004346
Disease	female breast cancer (is_implicated_in)	FANCI ATM	7.91e-04	8	159	2	DOID:0050671 (is_implicated_in)
Disease	neuroticism measurement, cognitive function measurement	HIVEP1 CTTNBP2 NUP210L ZNF507 TSC22D2 GFRA2 FAM193A FURIN PAFAH1B1 KIAA1328	1.04e-03	566	159	10	EFO_0007660, EFO_0008354
Disease	medulloblastoma (is_implicated_in)	TSC2 BRCA2	1.26e-03	10	159	2	DOID:0050902 (is_implicated_in)
Disease	generalized epilepsy with febrile seizures plus 2 (implicated_via_orthology)	SCN7A SCN8A	1.26e-03	10	159	2	DOID:0111294 (implicated_via_orthology)
Disease	dipeptidase 2 measurement	DPEP3 KLKB1	1.26e-03	10	159	2	EFO_0801528
Disease	Dravet syndrome (implicated_via_orthology)	SCN7A SCN8A	1.26e-03	10	159	2	DOID:0080422 (implicated_via_orthology)
Disease	Fanconi anemia (is_implicated_in)	BRCA2 FANCI	1.26e-03	10	159	2	DOID:13636 (is_implicated_in)
Disease	body weight	SECISBP2L GPR137 HIVEP1 SH3RF1 KIZ TSC22D2 RFX3 PPP1R3A NCOR1 SLC12A2 KCNJ15 KIAA1328 ADAMTS17 NIPBL COG4 PLXNA1	1.33e-03	1261	159	16	EFO_0004338
Disease	central corneal thickness	FSTL3 COL26A1 ZNF407 ITGA2 ACAD11 GLI3 ADAMTS17	1.48e-03	309	159	7	EFO_0005213
Disease	worry measurement	HIVEP1 CTTNBP2 MYCBP2 COLEC12 PPP2R3A	1.51e-03	154	159	5	EFO_0009589
Disease	peptidyl-glycine alpha-amidating monooxygenase measurement	MYCBP2 KLKB1	1.54e-03	11	159	2	EFO_0801871
Disease	N-acetylhistidine measurement	COL26A1 ALMS1	1.54e-03	11	159	2	EFO_0800022
Disease	Pulmonary Thromboembolisms	PLAT KLKB1	1.84e-03	12	159	2	C0524702
Disease	Pulmonary Embolism	PLAT KLKB1	1.84e-03	12	159	2	C0034065
Disease	generalized epilepsy with febrile seizures plus (implicated_via_orthology)	SCN7A SCN8A	1.84e-03	12	159	2	DOID:0060170 (implicated_via_orthology)
Disease	esophagus squamous cell carcinoma (is_implicated_in)	MAP3K1 KMT2C BRCA2	1.85e-03	45	159	3	DOID:3748 (is_implicated_in)
Disease	coronary artery disease	ANKRD31 ARID4A MYO9B RNF213 SEMA5A ITGA1 AKAP12 MAP3K1 EPG5 PPP2R3A ACAD11 FURIN PKHD1 KIF4B DEFB126	2.07e-03	1194	159	15	EFO_0001645
Disease	autoimmune thrombocytopenic purpura (is_marker_for)	CD40 PLAT	2.16e-03	13	159	2	DOID:8924 (is_marker_for)
Disease	Fanconi anemia	BRCA2 FANCI	2.52e-03	14	159	2	cv:C0015625
Disease	episodic memory	FASTKD2 CEP350 SERTM1	2.80e-03	52	159	3	EFO_0004333
Disease	Autosomal recessive primary microcephaly	ASPM CEP152	2.89e-03	15	159	2	cv:C3711387
Disease	health literacy measurement	SMG1 DLGAP2 GLI3	2.95e-03	53	159	3	EFO_0010104
Disease	total blood protein measurement	ZSWIM8 INPP5E ITGA1 COLEC12 IKBKE PKHD1 AFDN IL2RA	3.11e-03	449	159	8	EFO_0004536
Disease	breast cancer (is_marker_for)	TSC2 ITGA1 MAP3K1 KISS1R KDM1A	3.35e-03	185	159	5	DOID:1612 (is_marker_for)
Disease	Sjogren's syndrome (implicated_via_orthology)	ST14 IL2RA	3.72e-03	17	159	2	DOID:12894 (implicated_via_orthology)
Disease	Astrocytosis	ITGA1 ITGA2	3.72e-03	17	159	2	C3887640
Disease	pre-malignant neoplasm (biomarker_via_orthology)	GLI3 ATM	3.72e-03	17	159	2	DOID:0060071 (biomarker_via_orthology)
Disease	Gliosis	ITGA1 ITGA2	3.72e-03	17	159	2	C0017639
Disease	lymphocyte measurement	ITGA1 SP110 ARID2 IL2RA	3.75e-03	117	159	4	EFO_0803546
Disease	Polydactyly	INPP5E ALMS1 GLI3 ARMC8	3.75e-03	117	159	4	C0152427
Disease	adverse effect, response to xenobiotic stimulus	EYA4 ST14 PAFAH1B1	4.00e-03	59	159	3	EFO_0009658, GO_0009410
Disease	smoking status measurement	CTTNBP2 ZNF407 RFX3 COLEC12 FBXL16 ALMS1 HECW2 KIAA1328 PKHD1 CEP295 QSER1 WDR24 SERTM1 BRWD1	4.15e-03	1160	159	14	EFO_0006527
Disease	Bone marrow hypocellularity	BRCA2 FANCI	4.17e-03	18	159	2	C1855710
Disease	diet measurement	SECISBP2L DLGAP2 CTTNBP2 SH3RF1 KIF26B NUP210L RFX3 HECW2 ARID2 FURIN KIAA1328 PKHD1 NIPBL	4.58e-03	1049	159	13	EFO_0008111
Disease	citrulline measurement	KIF26B HMCN2	5.14e-03	20	159	2	EFO_0009777
Disease	Adenocarcinoma of prostate	BRCA2 ATM	5.14e-03	20	159	2	C0007112

Protein segments in the cluster

Peptide	Gene	Start	Entry
ATKCIRVSSTATTQD	AFDN	56	P55196
ALEDTCRQIQVISSS	ERVPABLB-1	416	P60509
TSLTISNEESLTCNT	EPG5	86	Q9HCE0
CIESKSNSVNTITRT	CEP152	1391	O94986
SNSVNTITRTLCEQA	CEP152	1396	O94986
TNVASGTCSIIVQER	ARID4A	1051	P29374
FGTRTIENSQCTKVE	ANKRD30B	421	Q9BXX2
QTREVQCLSTNQTLS	ADAMTSL4	991	Q6UY14
VCTKIQVQSSEASFT	AKAP12	1406	Q02952
VTLNNVEVCSENIST	COG4	546	Q9H9E3
QSITDAEATTARCLQ	ASB10	261	Q8WXI3
SRTQISDTNVVCLET	ALMS1	126	Q8TCU4
SDTNVVCLETTAQRG	ALMS1	131	Q8TCU4
SDVRSTNGTAECKTV	ARID2	1501	Q68CP9
RAVSTLSQASCVSQV	DLGAP2	516	Q9P1A6
LSQASCVSQVSEAEI	DLGAP2	521	Q9P1A6
NTVTSVLSAKVSCQR	CELSR1	2626	Q9NYQ6
DQCSLNTRVTVATKI	CCDC180	891	Q9P1Z9
CTATTVQSSNSQFRV	FAM193A	621	P78312
TQTVECTQTGSVVLN	ASPM	1166	Q8IZT6
QVCDDTITSRLNSSV	ARMCX3	206	Q9UH62
SCTRIVNKTTTLVND	ADAMTS17	826	Q8TE56
VASSDATNIECSIQR	ACAD11	511	Q709F0
EVKVTAESLTNSCQV	RAD51AP2	836	Q09MP3
DAASCTVTINQTVDV	RBM44	456	Q6ZP01
VVNFQETTRQSSLSC	QSER1	221	Q2KHR3
GTLIASCSNDQTVRV	PAFAH1B1	246	P43034
QSAVCISVVSNVTST	KRT76	501	Q01546
SVTNSSDQETACVLR	ANKRD31	371	Q8N7Z5
NESVTTQLSSVDTRC	HECW2	646	Q9P2P5
SQCSQSLSVSQVHVD	FANCI	556	Q9NVI1
SVGDRVTITCQASQD	IGKV1D-33	36	P01593
VENSIVKCSTRTDVS	GLI3	16	P10071
VSCVSVSTQTASDDQ	KMT2C	206	Q8NEZ4
ESTVCVTNVRSFTSA	KCNJ8	116	Q15842
QHQSSVRNVSTCEVS	HIPK2	806	Q9H2X6
VRNVSTCEVSSSQAI	HIPK2	811	Q9H2X6
TTEVSSRKCQQALAE	MAD2L1BP	116	Q15013
SEVECSTVTTRIVSQ	INPP5E	386	Q9NRR6
CQNCSRITNVSTISS	KRT39	16	Q6A163
ESTRCQDQAATTTVS	GPR137	341	Q96N19
EEVTVNASSTVSLQC	HMCN2	2861	Q8NDA2
TNATIVATLTAACAQ	MDH2	116	P40926
AIVTRTCESVLSSAV	KCNJ5-AS1	71	Q8TAV5
SEFVSSLQNTAVVCR	KIF26B	1316	Q2KJY2
STQCQTTRVLEQTLS	FER1L4	791	A9Z1Z3
LSRCSQNITETQESL	IKBKE	506	Q14164
VNVRLCFEISSVTTA	ITGAE	701	P38570
NSITDACLSVVAQTF	PLXNA1	1766	Q9UIW2
RGIETTNTCQVINDT	PLXNA3	1061	P51805
NSITDACLSVVAQTF	PLXNA3	1741	P51805
LRTQDATQTSCSTQS	PTGER2	336	P43116
VSTDCQTVVRNIQSF	PGLYRP3	216	Q96LB9
TSNLNEVRTTCTDTL	COLEC12	361	Q5KU26
SADVISTVVANLSAC	CES2	266	O00748
IVNVSSQCSQRAVTN	DCXR	131	Q7Z4W1
VLLNATVESTSAVCQ	KCNJ15	281	Q99712
SRTTECKQNESTIVE	NIPBL	656	Q6KC79
IQQVSVQATCATLTA	KISS1R	121	Q969F8
EQKASTSTNICELCT	LRRC37B	511	Q96QE4
TCNLTSSDISQVNVS	ITGA1	1071	P56199
SNVTDSCVVQTSNDT	KIZ	201	Q2M2Z5
TEVTCQVAASQKSVA	ITGA2	861	P17301
QETLTTSSQANLSVC	PPP2R3A	626	Q06190
QQVSSRKSTLQCSSV	KIAA1328	191	Q86T90
SEQVLLCASSQTSSI	MED16	291	Q9Y2X0
QEVRCAALSTQTTSD	DCHS2	3211	Q6V1P9
ISTKSENICNSTREI	PPP1R3A	946	Q16821
ATLSCEVAQAQTEVT	OBSCN	1276	Q5VST9
SATLSCEVAQAQTEV	OBSCN	1551	Q5VST9
RSRCNTTQGNEVTSI	ALPL	136	P05186
LCVTTAQTNTVSFRA	ATM	906	Q13315
QQETSSTELKTECAV	ARMC8	71	Q8IUR7
QSVRDCDTTAVITVA	ASPHD2	51	Q6ICH7
ISTRSNCINVLVTTT	EYA4	536	O95677
VLCQTLSERNSEITS	FHAD1	316	B1AJZ9
ETTFQCQIATVTSEV	ICE1	1391	Q9Y2F5
GTSIVNLTCTTNTTE	IL5RA	126	Q01344
TASGCEVIAVNTRST	KDM1A	596	O60341
CTTSLIKEQESSQAS	BRCA2	3386	P51587
TSVITTCTSVQEQGL	GFRA2	396	O00451
VTRSVACQTDLVTEN	CTTNBP2	301	Q8WZ74
ATCSLVLQTDVTRAE	FSTL3	46	O95633
SNIISVSTCAVNSAD	CEP126	671	Q9P2H0
SIACTVAELTSQNNR	COG3	346	Q96JB2
VSRTLQVLDAATCSS	FRMPD3	1571	Q5JV73
VEQTCSRQSQSSRES	FURIN	671	P09958
VTTLFVNQSSKCRTV	AMD1	281	P17707
TCKIAAQQSETARLT	CEP350	1431	Q5VT06
RVCSSDSDSSLQVVK	BRWD1	1901	Q9NSI6
QCTSSATRNTTKQVT	IL2RA	81	P01589
TSCLVTTTDFQIQTE	IL2RA	211	P01589
LDSQSTRTITCQVGS	MARF1	136	Q9Y4F3
FTCSITVQLSNTASV	DHDH	226	Q9UQ10
QLITQLSDETVACTA	KIF4B	471	Q2VIQ3
NTGDNSVCTTKTSTR	KLKB1	376	P03952
SVGDRVTITCQASQD	IGKV1-33	36	P01594
EQCRRVSSQVTVASE	ERMARD	541	Q5T6L9
FCVQTKTTRISTVTA	DEFB126	71	Q9BYW3
SASVSCQSQDQTAVR	DPEP3	141	Q9H4B8
TAIDQISISACSQAE	GPRIN3	466	Q6ZVF9
VSSEQVCSSSFVSQV	CEP295	1541	Q9C0D2
CILSTNIAETSVTID	DHX34	436	Q14147
CVISTNISATSLTID	DHX40	341	Q8IX18
SDCVTLKVRSVSVAT	FAM110C	241	Q1W6H9
QAVDCTTISSFTVRE	KCTD3	526	Q9Y597
TRTVSCQVQNGSETV	COL26A1	61	Q96A83
INISCVLTSQSEAVV	NUP210L	1771	Q5VU65
QTRSQSESCLQSHVE	PCARE	591	A6NGG8
DTQSVQSTISRFACR	PELI1	126	Q96FA3
TSDVSFSVIVENVNC	OTOG	1016	Q6ZRI0
TILVKCADANSRTSQ	MAP3K1	686	Q13233
SARITSLSVSDCINV	FBXL16	241	Q8N461
CVGQTERRSQSDTAV	SYTL3	221	Q4VX76
QSVTSQDLLTAVDAC	SZT2	1316	Q5T011
QSLETCEKTVSESSQ	ARHGAP11A	786	Q6P4F7
SIISLNTTISCSEAQ	TMEM179B	131	Q7Z7N9
TVSSEKVRSTNLNCS	MRPL53	36	Q96EL3
CLAVSSSVSNEEISQ	RAPGEF6	1336	Q8TEU7
SRTEVTQVNTTNCGR	SEMA4F	501	O95754
INTEVVACSVDSQFT	PRDX4	141	Q13162
CFQITSVTTAQVATS	TSC22D2	11	O75157
RKTCTTVAFTQVNSE	RPL7A	196	P62424
SEHIVTSTQTIRQCS	RFX3	726	P48380
NTVICQDSTVTSDLL	RIF1	1626	Q5UIP0
TSATDIQRVAVLCVS	FASTKD2	626	Q9NYY8
TLCIVQTSNSTIVQS	PRR20G	186	P0DPQ3
VSQCESVASTVSAQE	NCOR1	696	O75376
CSSALENTVSNRLST	SMG1	1356	Q96Q15
SCASIENTSTLQRKT	PHF12	631	Q96QT6
VSRVSDQQCSDTTLA	SPPL2C	121	Q8IUH8
VSTAVCRSTVKVSAQ	SPP2	111	Q13103
NSTCNVTLTCSVEKE	CD84	146	Q9UIB8
CTDQVIVQRSLSAKS	SLC5A9	296	Q2M3M2
FENTTCSTLTIRQSL	RMND1	36	Q9NWS8
AANTVNAITTECTER	SECISBP2L	136	Q93073
EVVEVCTSSTLKTNS	MYCBP2	2931	O75592
SCAINVATSNSSRIQ	PKHD1	1056	P08F94
RNSVIVATSSSFDCI	PKHD1	3201	P08F94
SFTNLEVCSISSQRS	SERTM1	86	A2A2V5
EVCSISSQRSTFSNL	SERTM1	91	A2A2V5
TCNSTVETRAQKART	SP110	326	Q9HB58
TNCTNALRSQSSTVA	SH3RF1	91	Q7Z6J0
IFTTNVNSIAASAVC	SEMA5A	306	Q13591
TVSSVVAASQQLCVT	ANKHD1	1936	Q8IWZ3
ERVQTKSQCLSVEQS	ATP11A	1106	P98196
EQVTNVSCLETSSSA	C17orf64	16	Q86WR6
EAVSSACQSQTSILQ	RNF213	1001	Q63HN8
DAEVTVCSITSVLSQ	USP17L3	351	A6NCW0
DSQVARISTCSEQSL	RAPGEF3	876	O95398
QASTSTEVSHQQCSV	USP27X	26	A6NNY8
ENSSQKRSVIVCQSR	ZBTB21	141	Q9ULJ3
QLKSDSSRCAQESSV	PLAT	411	P00750
SSRCAQESSVVRTVC	PLAT	416	P00750
DAEVTVCSITSVLSQ	USP17L4	351	A6NCW7
TSNVILTESIHVCSQ	TBC1D8B	211	Q0IIM8
EVQSLTSQRECSKTV	TBC1D8B	416	Q0IIM8
TSQRECSKTVNTEAL	TBC1D8B	421	Q0IIM8
NVNDTIVTELTNCTS	SLC12A2	551	P55011
TDSKTVQRTQDNSCS	ST14	201	Q9Y5Y6
SLQVITVTSEQCNTN	ZNF292	2056	O60281
SVKRNSTVDCNGVVS	SCN8A	636	Q9UQD0
TETRLTQCNVSATLQ	SCART1	506	Q4G0T1
QSSSEQCSNLSSVRR	TBC1D4	671	O60343
TRTVFSSTQLCVLND	NANOGP1	41	Q8N7R0
DELLSSQSTAINTVC	ZSWIM8	256	A7E2V4
SVQVQICSSEQLSSS	ZNF507	321	Q8TCN5
IKQSSSSECSTVDIA	SCN7A	866	Q01118
EACSSVQRVCVTTSE	ZNF407	481	Q9C0G0
VQRVCVTTSETQEAE	ZNF407	486	Q9C0G0
TSRAVSCLNQASTTL	WDR24	701	Q96S15
VCSITATVDSQVAIA	WDCP	206	Q9H6R7
ESSSVLSCDISRNNK	TLE2	711	Q04725
QTSQELVAESQSSCT	HIVEP1	246	P15822
VQRSSSSCICVTEKQ	SIGLEC14	336	Q08ET2
VQQKGTSETDTICTC	CD40	91	P25942
DACSTNSQVSESLRQ	TTLL7	656	Q6ZT98
CVRTASSVDIEVSLQ	TSC2	206	P49815
STTESQASCRVTATK	MYO9B	26	Q13459