Cluster composition

Functions

CategoryNameIntersectionWithQueryPValueGenesInTermGenesInQueryGenesInTermInQueryID
GeneOntologyBiologicalProcesspositive regulation of mRNA splicing, via spliceosome

RBMXL3 RBM3

1.98e-0444102GO:0048026
GeneOntologyBiologicalProcesspositive regulation of mRNA processing

RBMXL3 RBM3

2.46e-0449102GO:0050685
GeneOntologyBiologicalProcesspositive regulation of RNA splicing

RBMXL3 RBM3

4.07e-0463102GO:0033120
GeneOntologyBiologicalProcessmRNA splicing, via spliceosome

HNRNPUL2 RBMXL3 RBM3

5.68e-04358103GO:0000398
GeneOntologyBiologicalProcessRNA splicing, via transesterification reactions with bulged adenosine as nucleophile

HNRNPUL2 RBMXL3 RBM3

5.68e-04358103GO:0000377
GeneOntologyBiologicalProcessRNA splicing, via transesterification reactions

HNRNPUL2 RBMXL3 RBM3

5.87e-04362103GO:0000375
GeneOntologyBiologicalProcessRNA splicing

HNRNPUL2 RBMXL3 RBM3

1.51e-03502103GO:0008380
GeneOntologyBiologicalProcessregulation of mRNA splicing, via spliceosome

RBMXL3 RBM3

1.69e-03129102GO:0048024
GeneOntologyBiologicalProcessmRNA processing

HNRNPUL2 RBMXL3 RBM3

1.98e-03551103GO:0006397
GeneOntologyBiologicalProcessbone mineralization

STATH LOX

2.25e-03149102GO:0030282
GeneOntologyBiologicalProcessregulation of mRNA processing

RBMXL3 RBM3

2.52e-03158102GO:0050684
GeneOntologyBiologicalProcessbiomineral tissue development

STATH LOX

4.12e-03203102GO:0031214
GeneOntologyBiologicalProcessregulation of RNA splicing

RBMXL3 RBM3

4.28e-03207102GO:0043484
MousePhenoabnormal lung development

BCLAF1 LOX

1.50e-0314262MP:0001176
MousePhenoabnormal respiratory system development

BCLAF1 LOX

1.89e-0316062MP:0003115
DomainBAT2_N

PRRC2A PRRC2C

9.46e-073112IPR009738
DomainPRRC2

PRRC2A PRRC2C

9.46e-073112IPR033184
DomainBAT2_N

PRRC2A PRRC2C

9.46e-073112PF07001
DomainRRM_1

RBMXL3 RBM3

6.35e-03208112PF00076
DomainRRM

RBMXL3 RBM3

6.90e-03217112SM00360
DomainRRM_dom

RBMXL3 RBM3

7.53e-03227112IPR000504
DomainRRM

RBMXL3 RBM3

7.72e-03230112PS50102
Domain-

RBMXL3 RBM3

8.65e-032441123.30.70.330
DomainNucleotide-bd_a/b_plait

RBMXL3 RBM3

9.63e-03258112IPR012677
PathwayWP_MRNA_PROCESSING

BCLAF1 RBMXL3 RBM3

1.03e-0345173MM15946
PathwayWP_VEGFAVEGFR2_SIGNALING

FAM120A PRRC2C

1.77e-0243172M39729
Pubmed

Global analysis of TDP-43 interacting proteins reveals strong association with RNA splicing and translation machinery.

HNRNPUL2 FAM120A PRRC2A BCLAF1 PRRC2C

4.64e-0922311520020773
Pubmed

SND1 binds SARS-CoV-2 negative-sense RNA and promotes viral RNA synthesis through NSP9.

HNRNPUL2 FAM120A PRRC2A BCLAF1 PRRC2C

9.63e-0925811537794589
Pubmed

PTPN14 regulates Roquin2 stability by tyrosine dephosphorylation.

HNRNPUL2 FAM120A PRRC2A BCLAF1 PRRC2C RBM3

2.28e-0867811630209976
Pubmed

RNA-binding proteins with basic-acidic dipeptide (BAD) domains self-assemble and aggregate in Alzheimer's disease.

HNRNPUL2 FAM120A PRRC2A BCLAF1 PRRC2C RBM3

3.08e-0871311629802200
Pubmed

HDLBP Promotes Hepatocellular Carcinoma Proliferation and Sorafenib Resistance by Suppressing Trim71-dependent RAF1 Degradation.

FAM120A PRRC2A BCLAF1 RBMXL3 LOX PRRC2C RBM3

4.18e-08137111736244648
Pubmed

The mRNA-bound proteome and its global occupancy profile on protein-coding transcripts.

HNRNPUL2 FAM120A PRRC2A BCLAF1 PRRC2C RBM3

6.41e-0880711622681889
Pubmed

TERRA transcripts are bound by a complex array of RNA-binding proteins.

HNRNPUL2 PRRC2A BCLAF1

7.68e-082811320975687
Pubmed

The PRMT5/WDR77 complex regulates alternative splicing through ZNF326 in breast cancer.

HNRNPUL2 FAM120A PRRC2A PRRC2C

9.88e-0814711428977470
Pubmed

A protein-RNA interaction atlas of the ribosome biogenesis factor AATF.

HNRNPUL2 PRRC2A BCLAF1 PRRC2C

1.46e-0716211431363146
Pubmed

Beads-free protein immunoprecipitation for a mass spectrometry-based interactome and posttranslational modifications analysis.

HNRNPUL2 FAM120A BCLAF1 RBM3

1.86e-0717211426336360
Pubmed

Arginine methylation and ubiquitylation crosstalk controls DNA end-resection and homologous recombination repair.

HNRNPUL2 FAM120A PRRC2A BCLAF1 PRRC2C

4.19e-0755111534728620
Pubmed

Interactome analyses revealed that the U1 snRNP machinery overlaps extensively with the RNAP II machinery and contains multiple ALS/SMA-causative proteins.

HNRNPUL2 FAM120A PRRC2A BCLAF1

7.50e-0724411429884807
Pubmed

SMYD3 Impedes Small Cell Lung Cancer Sensitivity to Alkylation Damage through RNF113A Methylation-Phosphorylation Cross-talk.

HNRNPUL2 FAM120A PRRC2A BCLAF1 PRRC2C

9.81e-0765511535819319
Pubmed

mTORC1 activity regulates post-translational modifications of glycine decarboxylase to modulate glycine metabolism and tumorigenesis.

HNRNPUL2 FAM120A PRRC2A BCLAF1

1.19e-0627411434244482
Pubmed

Anticancer sulfonamides target splicing by inducing RBM39 degradation via recruitment to DCAF15.

HNRNPUL2 FAM120A PRRC2A BCLAF1 PRRC2C

1.50e-0671411528302793
Pubmed

Characterizing ZC3H18, a Multi-domain Protein at the Interface of RNA Production and Destruction Decisions.

HNRNPUL2 PRRC2A BCLAF1 PRRC2C RBM3

1.68e-0673111529298432
Pubmed

A protein-interaction network of interferon-stimulated genes extends the innate immune system landscape.

HNRNPUL2 FAM120A PRRC2A BCLAF1 PRRC2C RBM3

1.93e-06144011630833792
Pubmed

Spatiotemporal-resolved protein networks profiling with photoactivation dependent proximity labeling.

PRRC2A BCLAF1 PRRC2C RBM3

5.28e-0639911435987950
Pubmed

Spatiotemporal profile of postsynaptic interactomes integrates components of complex brain disorders.

HNRNPUL2 FAM120A PRRC2A BCLAF1 PRRC2C

6.48e-0696311528671696
Pubmed

Elucidation of the 14-3-3ζ interactome reveals critical roles of RNA-splicing factors during adipogenesis.

FAM120A LOX PRRC2C

6.81e-0612211329530978
Pubmed

LINC00240 in the 6p22.1 risk locus promotes gastric cancer progression through USP10-mediated DDX21 stabilization.

PRRC2A PRRC2C

1.23e-051711237072811
Pubmed

PRISMA and BioID disclose a motifs-based interactome of the intrinsically disordered transcription factor C/EBPα.

FAM120A PRRC2A BCLAF1 PRRC2C RBM3

1.25e-05110311534189442
Pubmed

A probability-based approach for high-throughput protein phosphorylation analysis and site localization.

HNRNPUL2 FAM120A PRRC2A BCLAF1

1.32e-0550311416964243
Pubmed

PRRC2B modulates oligodendrocyte progenitor cell development and myelination by stabilizing Sox2 mRNA.

PRRC2A PRRC2C

2.09e-052211238507412
Pubmed

CHD3 and CHD4 form distinct NuRD complexes with different yet overlapping functionality.

HNRNPUL2 FAM120A BCLAF1 PRRC2C

2.72e-0560511428977666
Pubmed

LGALS3BP regulates centriole biogenesis and centrosome hypertrophy in cancer cells.

HNRNPUL2 FAM120A PRRC2A PRRC2C

3.36e-0563911423443559
Pubmed

Identifying and quantifying in vivo methylation sites by heavy methyl SILAC.

FAM120A RBM3

3.94e-053011215782174
Pubmed

BioID-based Identification of Skp Cullin F-box (SCF)β-TrCP1/2 E3 Ligase Substrates.

HNRNPUL2 FAM120A PRRC2A

4.30e-0522611325900982
Pubmed

KCTD13-mediated ubiquitination and degradation of GluN1 regulates excitatory synaptic transmission and seizure susceptibility.

HNRNPUL2 FAM120A PRRC2A BCLAF1 PRRC2C

4.40e-05143111537142655
Pubmed

A Degradation Motif in STAU1 Defines a Novel Family of Proteins Involved in Inflammation.

FAM120A PRRC2A BCLAF1 PRRC2C

5.47e-0572411436232890
Pubmed

Prohibitin 1 regulates tumor cell apoptosis via the interaction with X-linked inhibitor of apoptosis protein.

HNRNPUL2 PRRC2A PRRC2C RBM3

5.50e-0572511427025967
Pubmed

SETD1A Methyltransferase Is Physically and Functionally Linked to the DNA Damage Repair Protein RAD18.

FAM120A BCLAF1 PRRC2C

5.87e-0525111331076518
Pubmed

Circular RNA circPVT1 promotes nasopharyngeal carcinoma metastasis via the β-TrCP/c-Myc/SRSF1 positive feedback loop.

HNRNPUL2 FAM120A BCLAF1

6.52e-0526011336199071
Pubmed

The E3 ubiquitin ligase HECTD1 contributes to cell proliferation through an effect on mitosis.

HNRNPUL2 FAM120A PRRC2A PRRC2C

6.57e-0575911435915203
Pubmed

Prediction of the coding sequences of unidentified human genes. V. The coding sequences of 40 new genes (KIAA0161-KIAA0200) deduced by analysis of cDNA clones from human cell line KG-1.

FAM120A BCLAF1

7.41e-05411128724849
Pubmed

Virus-Host Interactome and Proteomic Survey Reveal Potential Virulence Factors Influencing SARS-CoV-2 Pathogenesis.

HNRNPUL2 FAM120A RBMXL3

8.56e-0528511332838362
Pubmed

ATPase-Modulated Stress Granules Contain a Diverse Proteome and Substructure.

FAM120A PRRC2A PRRC2C

1.15e-0431511326777405
Pubmed

Interactome of vertebrate GAF/ThPOK reveals its diverse functions in gene regulation and DNA repair.

HNRNPUL2 FAM120A PRRC2A

1.22e-0432111332098917
Pubmed

Analysis of HIV-1 Gag protein interactions via biotin ligase tagging.

PRRC2A PRRC2C

1.29e-045411225631074
Pubmed

Elucidation of the BMI1 interactome identifies novel regulatory roles in glioblastoma.

FAM120A PRRC2A PRRC2C

1.31e-0432911334316702
Pubmed

Global phosphoproteome of HT-29 human colon adenocarcinoma cells.

PRRC2A BCLAF1

1.54e-045911216083285
Pubmed

The Nse5/6-like SIMC1-SLF2 complex localizes SMC5/6 to viral replication centers.

PRRC2A BCLAF1 PRRC2C RBM3

1.59e-0495411436373674
Pubmed

Cold-inducible RBM3 inhibits PERK phosphorylation through cooperation with NF90 to protect cells from endoplasmic reticulum stress.

FAM120A RBM3

1.59e-046011226472337
Pubmed

In silico APC/C substrate discovery reveals cell cycle-dependent degradation of UHRF1 and other chromatin regulators.

FAM120A PRRC2A PRRC2C RBM3

1.70e-0497111433306668
Pubmed

N-Terminomics for the Identification of In Vitro Substrates and Cleavage Site Specificity of the SARS-CoV-2 Main Protease.

PRRC2A BCLAF1 PRRC2C

1.71e-0436011333111431
Pubmed

SR protein kinases promote splicing of nonconsensus introns.

PRRC2A BCLAF1 PRRC2C

1.72e-0436111326167880
Pubmed

Autoubiquitination of the 26S proteasome on Rpn13 regulates breakdown of ubiquitin conjugates.

PRRC2A PRRC2C

1.93e-046611224811749
Pubmed

Identification of a USP9X Substrate NFX1-123 by SILAC-Based Quantitative Proteomics.

PRRC2A BCLAF1 PRRC2C

2.06e-0438411331059266
Pubmed

WWP1 upregulation predicts poor prognosis and promotes tumor progression by regulating ubiquitination of NDFIP1 in intrahepatic cholangiocarcinoma.

FAM120A BCLAF1

2.11e-046911235264565
Pubmed

Targeting SKA3 suppresses the proliferation and chemoresistance of laryngeal squamous cell carcinoma via impairing PLK1-AKT axis-mediated glycolysis.

HNRNPUL2 FAM120A

2.30e-047211233106477
Pubmed

The SARS-CoV-2 RNA interactome.

FAM120A RBM3

2.43e-047411233989516
Pubmed

Transcription factor protein interactomes reveal genetic determinants in heart disease.

HNRNPUL2 BCLAF1 RBM3

2.52e-0441111335182466
Pubmed

TRIM28-mediated nucleocapsid protein SUMOylation enhances SARS-CoV-2 virulence.

HNRNPUL2 BCLAF1 RBM3

2.88e-0443011338172120
InteractionPRMT8 interactions

HNRNPUL2 FAM120A BCLAF1 PRRC2C RBM3

1.50e-09104115int:PRMT8
InteractionDMRT2 interactions

HNRNPUL2 PRRC2A BCLAF1

3.93e-0728113int:DMRT2
InteractionRC3H2 interactions

HNRNPUL2 FAM120A PRRC2A BCLAF1 PRRC2C RBM3

5.15e-07667116int:RC3H2
InteractionRC3H1 interactions

HNRNPUL2 FAM120A PRRC2A BCLAF1 PRRC2C RBM3

5.62e-07677116int:RC3H1
InteractionIGF2BP2 interactions

HNRNPUL2 FAM120A PRRC2A PRRC2C RBM3

7.18e-07357115int:IGF2BP2
InteractionCASC3 interactions

HNRNPUL2 FAM120A PRRC2A RBM3

7.50e-07142114int:CASC3
InteractionMKRN2 interactions

HNRNPUL2 FAM120A PRRC2A BCLAF1 PRRC2C

1.04e-06385115int:MKRN2
InteractionRBMXL1 interactions

KRTAP19-7 HNRNPUL2 FAM120A BCLAF1

1.07e-06155114int:RBMXL1
InteractionALG13 interactions

FAM120A PRRC2A LOX PRRC2C

2.07e-06183114int:ALG13
InteractionCIT interactions

HNRNPUL2 FAM120A PRRC2A BCLAF1 RBMXL3 PRRC2C RBM3

2.51e-061450117int:CIT
InteractionPAIP2B interactions

FAM120A BCLAF1 RBM3

2.63e-0652113int:PAIP2B
InteractionPRMT1 interactions

HNRNPUL2 FAM120A PRRC2A BCLAF1 PRRC2C RBM3

3.57e-06929116int:PRMT1
InteractionTARDBP interactions

HNRNPUL2 FAM120A PRRC2A BCLAF1 PRRC2C

4.56e-06520115int:TARDBP
InteractionSNRNP70 interactions

HNRNPUL2 FAM120A PRRC2A BCLAF1 PRRC2C RBM3

4.99e-06984116int:SNRNP70
InteractionLARP4B interactions

FAM120A PRRC2A BCLAF1 PRRC2C

6.06e-06240114int:LARP4B
InteractionPUM1 interactions

HNRNPUL2 FAM120A PRRC2A PRRC2C

1.23e-05287114int:PUM1
InteractionFXR1 interactions

HNRNPUL2 FAM120A PRRC2A BCLAF1 PRRC2C

1.67e-05679115int:FXR1
InteractionRNF113A interactions

HNRNPUL2 FAM120A PRRC2A BCLAF1 PRRC2C

1.83e-05692115int:RNF113A
InteractionGLDC interactions

HNRNPUL2 FAM120A PRRC2A BCLAF1

1.91e-05321114int:GLDC
InteractionCEBPA interactions

HNRNPUL2 FAM120A PRRC2A BCLAF1 PRRC2C RBM3

1.94e-051245116int:CEBPA
InteractionRBM42 interactions

HNRNPUL2 FAM120A PRRC2A PRRC2C

2.15e-05331114int:RBM42
InteractionMOV10 interactions

HNRNPUL2 FAM120A PRRC2A BCLAF1 PRRC2C RBM3

2.45e-051297116int:MOV10
InteractionFUS interactions

HNRNPUL2 STATH FAM120A PRRC2A BCLAF1

2.82e-05757115int:FUS
InteractionWDR77 interactions

HNRNPUL2 FAM120A PRRC2A PRRC2C

3.03e-05361114int:WDR77
InteractionLINC00240 interactions

PRRC2A PRRC2C

3.24e-0516112int:LINC00240
InteractionMYCN interactions

HNRNPUL2 FAM120A PRRC2A BCLAF1 PRRC2C RBM3

3.39e-051373116int:MYCN
InteractionAATF interactions

HNRNPUL2 PRRC2A BCLAF1 PRRC2C

3.55e-05376114int:AATF
InteractionMRPS9 interactions

HNRNPUL2 FAM120A PRRC2A RBM3

3.77e-05382114int:MRPS9
InteractionR3HDM2 interactions

FAM120A PRRC2A PRRC2C

4.07e-05129113int:R3HDM2
InteractionTRIM56 interactions

FAM120A PRRC2A PRRC2C

4.87e-05137113int:TRIM56
InteractionSUPV3L1 interactions

HNRNPUL2 FAM120A RBM3

5.09e-05139113int:SUPV3L1
InteractionPTCD1 interactions

HNRNPUL2 FAM120A RBM3

5.42e-05142113int:PTCD1
InteractionZC3H18 interactions

HNRNPUL2 PRRC2A BCLAF1 PRRC2C RBM3

5.72e-05877115int:ZC3H18
InteractionDAZL interactions

FAM120A PRRC2A PRRC2C

5.77e-05145113int:DAZL
InteractionSEC16A interactions

HNRNPUL2 FAM120A PRRC2A PRRC2C

5.77e-05426114int:SEC16A
InteractionCPEB1 interactions

FAM120A PRRC2A PRRC2C

5.89e-05146113int:CPEB1
InteractionCAND1 interactions

HNRNPUL2 FAM120A PRRC2A BCLAF1 RBM3

6.28e-05894115int:CAND1
InteractionCPEB4 interactions

FAM120A PRRC2A PRRC2C

7.17e-05156113int:CPEB4
InteractionRPA4 interactions

FAM120A PRRC2A BCLAF1 PRRC2C

7.27e-05452114int:RPA4
InteractionHNRNPCL1 interactions

HNRNPUL2 FAM120A BCLAF1

7.88e-05161113int:HNRNPCL1
InteractionHNRNPA1 interactions

HNRNPUL2 FAM120A PRRC2A BCLAF1 RBM3

8.18e-05945115int:HNRNPA1
InteractionSNRPA interactions

HNRNPUL2 BCLAF1 PRRC2C RBM3

9.33e-05482114int:SNRPA
InteractionZCCHC3 interactions

FAM120A PRRC2A RBM3

9.42e-05171113int:ZCCHC3
InteractionZFP36 interactions

FAM120A PRRC2A PRRC2C

1.11e-04181113int:ZFP36
InteractionIGF2BP1 interactions

HNRNPUL2 FAM120A PRRC2A PRRC2C

1.14e-04508114int:IGF2BP1
InteractionPSPC1 interactions

HNRNPUL2 FAM120A PRRC2A PRRC2C

1.21e-04515114int:PSPC1
InteractionELAVL2 interactions

HNRNPUL2 FAM120A RBM3

1.25e-04188113int:ELAVL2
InteractionCDKN2AIPNL interactions

BCLAF1 RBM3

1.25e-0431112int:CDKN2AIPNL
InteractionRBM39 interactions

HNRNPUL2 FAM120A PRRC2A BCLAF1 PRRC2C

1.30e-041042115int:RBM39
InteractionFAM120C interactions

FAM120A PRRC2A PRRC2C

1.31e-04191113int:FAM120C
InteractionFMR1 interactions

FAM120A PRRC2A BCLAF1 PRRC2C

1.41e-04536114int:FMR1
InteractionRBM47 interactions

FAM120A PRRC2A PRRC2C

1.59e-04204113int:RBM47
InteractionRBMS1 interactions

FAM120A PRRC2A PRRC2C

1.66e-04207113int:RBMS1
InteractionTDRD3 interactions

FAM120A PRRC2A PRRC2C

1.78e-04212113int:TDRD3
InteractionMRPL15 interactions

HNRNPUL2 FAM120A PRRC2A

1.83e-04214113int:MRPL15
InteractionZC3H11A interactions

HNRNPUL2 FAM120A BCLAF1

1.85e-04215113int:ZC3H11A
InteractionZC3H7A interactions

FAM120A PRRC2A PRRC2C

1.85e-04215113int:ZC3H7A
InteractionUPF1 interactions

HNRNPUL2 FAM120A PRRC2A RBM3

1.92e-04581114int:UPF1
InteractionMEX3B interactions

FAM120A PRRC2A PRRC2C

2.04e-04222113int:MEX3B
InteractionRPL5 interactions

HNRNPUL2 PRRC2A BCLAF1 PRRC2C

2.26e-04606114int:RPL5
InteractionFZR1 interactions

HNRNPUL2 FAM120A PRRC2A PRRC2C RBM3

2.27e-041172115int:FZR1
InteractionNGRN interactions

HNRNPUL2 FAM120A RBM3

2.41e-04235113int:NGRN
InteractionOTUD4 interactions

KRTAP19-7 PRRC2A PRRC2C

2.44e-04236113int:OTUD4
InteractionYTHDF3 interactions

FAM120A PRRC2A PRRC2C

2.76e-04246113int:YTHDF3
InteractionPRR3 interactions

HNRNPUL2 FAM120A RBM3

2.76e-04246113int:PRR3
InteractionCHCHD2 interactions

PRRC2A BCLAF1 PRRC2C

2.82e-04248113int:CHCHD2
InteractionMATR3 interactions

HNRNPUL2 FAM120A BCLAF1 RBM3

3.04e-04655114int:MATR3
InteractionBMI1 interactions

FAM120A PRRC2A BCLAF1 PRRC2C

3.11e-04659114int:BMI1
InteractionHELZ interactions

KRTAP19-7 PRRC2A PRRC2C

3.14e-04257113int:HELZ
InteractionLSM14A interactions

FAM120A PRRC2A PRRC2C

3.24e-04260113int:LSM14A
InteractionCAMK2A interactions

KRTAP19-7 HNRNPUL2 FAM120A

3.99e-04279113int:CAMK2A
InteractionCSDE1 interactions

FAM120A PRRC2A PRRC2C

4.20e-04284113int:CSDE1
InteractionSRPK2 interactions

HNRNPUL2 PRRC2A BCLAF1 PRRC2C

4.29e-04717114int:SRPK2
InteractionDDX21 interactions

HNRNPUL2 FAM120A BCLAF1 PRRC2C

4.32e-04718114int:DDX21
InteractionCELF1 interactions

FAM120A PRRC2A PRRC2C

4.38e-04288113int:CELF1
InteractionSYNCRIP interactions

HNRNPUL2 FAM120A PRRC2A PRRC2C

4.38e-04721114int:SYNCRIP
InteractionMRPS2 interactions

HNRNPUL2 FAM120A BCLAF1

4.47e-04290113int:MRPS2
InteractionKLF15 interactions

HNRNPUL2 PRRC2A PRRC2C

4.47e-04290113int:KLF15
InteractionZFAND2B interactions

PRRC2A PRRC2C

4.71e-0460112int:ZFAND2B
InteractionFUBP3 interactions

FAM120A PRRC2A PRRC2C

4.79e-04297113int:FUBP3
InteractionUBAP2L interactions

FAM120A PRRC2A PRRC2C

4.84e-04298113int:UBAP2L
InteractionEIF4ENIF1 interactions

FAM120A PRRC2A PRRC2C

4.93e-04300113int:EIF4ENIF1
InteractionYTHDF1 interactions

FAM120A PRRC2A PRRC2C

5.03e-04302113int:YTHDF1
InteractionDHX36 interactions

HNRNPUL2 FAM120A RBM3

5.08e-04303113int:DHX36
InteractionKCTD13 interactions

HNRNPUL2 FAM120A PRRC2A BCLAF1 PRRC2C

5.10e-041394115int:KCTD13
InteractionHNRNPA2B1 interactions

HNRNPUL2 FAM120A BCLAF1 RBM3

5.20e-04754114int:HNRNPA2B1
InteractionCHD3 interactions

HNRNPUL2 FAM120A BCLAF1 PRRC2C

5.28e-04757114int:CHD3
InteractionMRPS31 interactions

FAM120A PRRC2A RBM3

5.43e-04310113int:MRPS31
InteractionYTHDF2 interactions

FAM120A PRRC2A PRRC2C

5.53e-04312113int:YTHDF2
InteractionATXN2 interactions

HNRNPUL2 FAM120A PRRC2A

5.53e-04312113int:ATXN2
InteractionBTRC interactions

HNRNPUL2 FAM120A PRRC2A BCLAF1

5.77e-04775114int:BTRC
InteractionDAP3 interactions

FAM120A PRRC2A RBM3

6.17e-04324113int:DAP3
InteractionMAD2L2 interactions

FAM120A PRRC2A LOX

6.23e-04325113int:MAD2L2
InteractionKLF8 interactions

HNRNPUL2 PRRC2A PRRC2C

6.45e-04329113int:KLF8
InteractionCHCHD10 interactions

PRRC2A PRRC2C

7.35e-0475112int:CHCHD10
InteractionFAM120A interactions

HNRNPUL2 FAM120A RBM3

7.66e-04349113int:FAM120A
InteractionHNRNPK interactions

HNRNPUL2 FAM120A BCLAF1 RBM3

8.28e-04853114int:HNRNPK
InteractionHDLBP interactions

FAM120A PRRC2A RBMXL3 RBM3

8.36e-04855114int:HDLBP
InteractionDUSP11 interactions

HNRNPUL2 FAM120A

8.78e-0482112int:DUSP11
InteractionZBTB7B interactions

HNRNPUL2 FAM120A PRRC2A

8.80e-04366113int:ZBTB7B
GeneFamilyRNA binding motif containing

RBMXL3 RBM3

1.35e-0321352725
CoexpressionGSE25146_UNSTIM_VS_HELIOBACTER_PYLORI_LPS_STIM_AGS_CELL_DN

FAM120A BCLAF1 PRRC2C

3.97e-05166113M8129
CoexpressionMCDOWELL_ACUTE_LUNG_INJURY_UP

LOX RBM3

1.71e-0447112M1527
CoexpressionMCDOWELL_ACUTE_LUNG_INJURY_UP

LOX RBM3

1.79e-0448112MM1169
ToppCelldroplet-Limb_Muscle-MUSCLE-30m-Mesenchymal-mesenchymal_stem_cell|Limb_Muscle / Tongue_Heart_Limb_Muscle_Aorta_Diaphragm - method, tissue, subtissue, age, lineage, cell ontology and free annotation

BCLAF1 LOX PRRC2C

1.23e-0519211311088878043a6ff95ba1970361256a82e434b80a
ToppCelldroplet-Limb_Muscle-MUSCLE-30m-Mesenchymal|Limb_Muscle / Tongue_Heart_Limb_Muscle_Aorta_Diaphragm - method, tissue, subtissue, age, lineage, cell ontology and free annotation

BCLAF1 LOX PRRC2C

1.29e-051951135c86fddd6d0530beecf45ea5ba6b823123847696
ToppCell(05)_Secretory-(2)_GFP_FOXI1|(05)_Secretory / shred by cell type by condition

FAM120A BCLAF1 PRRC2C

1.37e-05199113d72d87e1e530ed894c0ad5e7b5b2b1d6b59fa098
ToppCell(03)_KRT6B+-(2)_GFP_FOXI1|(03)_KRT6B+ / shred by cell type by condition

FAM120A BCLAF1 PRRC2C

1.37e-05199113c425e7975f492ed5cfcca022248adb627e1d27d4
ToppCell(02)_MMP9/10+-(2)_GFP_FOXI1|(02)_MMP9/10+ / shred by cell type by condition

FAM120A BCLAF1 LOX

1.37e-0519911318a7f9ced4364f45b184bd529f32ef02c27779d3
ToppCell(10)_Ciliated-(2)_GFP_FOXI1|(10)_Ciliated / shred by cell type by condition

FAM120A BCLAF1 PRRC2C

1.37e-0519911361b1ed2db71b96157b92b7535d1955a4033098da
ToppCell(04)_Interm._basal>secr.-(2)_GFP_FOXI1|(04)_Interm._basal>secr. / shred by cell type by condition

FAM120A BCLAF1 PRRC2C

1.37e-0519911353ca3861f9e00dab3f3fbefb0837857ee39ab084
ToppCell(00)_Basal-(2)_GFP_FOXI1|(00)_Basal / shred by cell type by condition

FAM120A BCLAF1 PRRC2C

1.37e-0519911319674e1eaeb51e4196d847cb62aa437c852951d3
ToppCell(09)_Interm._secr.>cil.-(2)_GFP_FOXI1|(09)_Interm._secr.>cil. / shred by cell type by condition

FAM120A BCLAF1 PRRC2C

1.37e-05199113fc680f85ebd3bab4c72876a19a461b0afb5f51ce
ToppCell(01)_IL1RL1+-(2)_GFP_FOXI1|(01)_IL1RL1+ / shred by cell type by condition

FAM120A BCLAF1 PRRC2C

1.37e-05199113a2f7d0cabf35b80fe239fae34a77bf9344d5d743
ToppCellCOVID-19-COVID-19_Mild|COVID-19 / Disease, condition lineage and cell class

BCLAF1 PRRC2C RBM3

1.39e-0520011362c25042086f1afd1102e0720e933c2e476468fd
ToppCellTCGA-Bone_and_Soft_Tissue-Primary_Tumor-Sarcoma-Undifferentiated_Pleomorphic_Sarcoma-3|TCGA-Bone_and_Soft_Tissue / Sample_Type by Project: Shred V9

STATH RBMXL3

2.25e-0492112f646685fd9c6601b48f1855b6edc47626ea666b0
ToppCellnormal_Lymph_Node-B_lymphocytes-Undetermined|normal_Lymph_Node / Location, Cell class and cell subclass

FAM120A PRRC2C

6.94e-0416211291ac35ae7fde411cd6a44e715a33dac62419cab8
ToppCellTCGA-Stomach-Primary_Tumor-Stomach_Adenocarcinoma-Stomach_Adenocarcinoma_-_Diffuse-6|TCGA-Stomach / Sample_Type by Project: Shred V9

FAM120A RBM3

7.02e-04163112c1a98d6776b685f20dde049715233e5c73ce3244
ToppCellNS-critical-d_0-4-Epithelial-Secretory|d_0-4 / Location, Severity, dps_group, Lineage and Cell class of Upper airway (combined)

STATH LOX

7.54e-04169112aec97583b23112060437b619cb429dc32f29285f
ToppCellE17.5-Mesenchymal-developing_mesenchymal_cell-mesenchymal_immature_unknown_1|E17.5 / developmental_time, Lineage, Cell group, Cell type, Cell type_cellcyc-phase

TMC3 LOX

7.63e-041701127fa022471e14ac8a3bc147c793368a4d56a8e591
ToppCell5'-Airway_Nasal-Epithelial-Epithelial_transtional-secretory-nasal_mucosa_goblet_cell-Goblet_(nasal)-Goblet_(nasal)_L.0.2.0.4|5' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5

STATH LOX

7.90e-04173112176b956e71d98e8275d698b39437fc326e5fe449
ToppCelldroplet-Lung-18m-Hematologic-myeloid-classical_monocyte-classical_monocyte_l14|18m / method, tissue, age, lineage, sublineage, cell ontologies, cell type and subtype

FAM120A RBM3

7.99e-0417411202ab165b064acb91f2d3f59cc5be195899d61a83
ToppCell(00)_Basal-(2)_48hpi|(00)_Basal / shred by cell type and Timepoint

FAM120A RBM3

8.18e-041761120f6770296d7fa453ffbf6ca6d5fdebc888f6eb60
ToppCelldroplet-Limb_Muscle-MUSCLE-30m|Limb_Muscle / Tongue_Heart_Limb_Muscle_Aorta_Diaphragm - method, tissue, subtissue, age, lineage, cell ontology and free annotation

BCLAF1 PRRC2C

8.36e-0417811201dafd19de04eff459253eaa9a35debf8f3deedf
ToppCellNS|World / Location, Severity, dps_group, Lineage and Cell class of Upper airway (combined)

STATH RBM3

8.55e-041801128472dcce7bc0b7ce428ec17ddf0018f3258f78d2
ToppCelldroplet-Marrow-nan-3m|Marrow / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation

BCLAF1 PRRC2C

8.93e-041841121154a5ad7b8512272b7476f949ddac350910bfb7
ToppCelldroplet-Heart-HEART_(ALL_MINUS_AORTA)-30m|Heart / Tongue_Heart_Limb_Muscle_Aorta_Diaphragm - method, tissue, subtissue, age, lineage, cell ontology and free annotation

LOX RBM3

9.42e-04189112562f8bf5a7d38afb4a8f2415d617d5f79cfb7e3f
ToppCelldroplet-Heart-HEART_(ALL_MINUS_AORTA)|Heart / Tongue_Heart_Limb_Muscle_Aorta_Diaphragm - method, tissue, subtissue, age, lineage, cell ontology and free annotation

LOX RBM3

9.42e-04189112270dd4a0fc5260288fe6829837942c78b40ecec4
ToppCell10x_3'_v2v3-Non-neoplastic-Myeloid-Mono-Mono_anti-infl-A|10x_3'_v2v3 / Platform, Oncotype, Lineage, Cell_class, celltype (level4), mutation group

HNRNPUL2 FAM120A

9.52e-0419011263018acb7ad80415e861643162abdc2e55968ee4
ToppCelldroplet-Limb_Muscle-MUSCLE-30m-Mesenchymal-nan|Limb_Muscle / Tongue_Heart_Limb_Muscle_Aorta_Diaphragm - method, tissue, subtissue, age, lineage, cell ontology and free annotation

BCLAF1 PRRC2C

9.62e-041911127d1595e616f6f111fc2f5bc1b179c5d67d624cc9
ToppCellPBMC_fresh-frozen-Mild-Moderate_progression_d12-25|PBMC_fresh-frozen / Compartment, severity and other cell annotations on 10x 3' data (130k)

BCLAF1 PRRC2C

9.62e-041911121ecd9849d14d5ebf3daf610e83fb50820cafd3ed
ToppCelldroplet-Tongue-TONGUE-1m-Epithelial-suprabasal_differentiating|Tongue / Tongue_Heart_Limb_Muscle_Aorta_Diaphragm - method, tissue, subtissue, age, lineage, cell ontology and free annotation

BCLAF1 PRRC2C

9.82e-0419311249f4fbec91acda4727703e0e359ed780eefb8a22
ToppCellCOVID-19_Mild|World / Disease condition and Cell class

BCLAF1 PRRC2C

9.82e-041931127256a5a491536c525b31ae96d47ab5c6303cb73a
ToppCellTCGA-Prostate-Primary_Tumor-Prostate_Adenocarcinoma-Acinar_Adenocarcinoma-6|TCGA-Prostate / Sample_Type by Project: Shred V9

FAM120A BCLAF1

9.82e-04193112abd71b2cf667ef2b1c4d88acd0c1dd19a12ff659
ToppCelldroplet-Limb_Muscle-MUSCLE|Limb_Muscle / Tongue_Heart_Limb_Muscle_Aorta_Diaphragm - method, tissue, subtissue, age, lineage, cell ontology and free annotation

BCLAF1 PRRC2C

9.92e-04194112e3d63874111d1e8da3977329426e4dcf68d6de87
ToppCelldroplet-Pancreas-PANCREAS-30m-Epithelial-pancreatic_B_cell|Pancreas / Large_Intestine_Pancreas_Liver - method, tissue, subtissue, age, lineage, cell ontology and free annotation

FAM120A PRRC2C

1.00e-031951127796ea9247f4c63762f0de8490fed08b9717fa23
ToppCelldroplet-Pancreas-PANCREAS-30m-Epithelial-pancreatic_B_cell|Pancreas / Large_Intestine_Pancreas_Liver - method, tissue, subtissue, age, lineage, cell ontology and free annotation

FAM120A PRRC2C

1.00e-031951123e519cffa6144a62b06124642a14c9ff39b76554
ToppCellControl-Classical_Monocyte-cMono_2|Classical_Monocyte / Disease condition and Cell class

BCLAF1 PRRC2C

1.02e-03197112eb7610c9496a95a5fd866e16abcbc39b83abe617
ToppCellCOVID-19_Mild|World / Disease group, lineage and cell class

BCLAF1 PRRC2C

1.02e-031971125c33454b10023decd2f5ccda9229b6512659711e
ToppCellH1299-infected-SARSCoV2|infected / Cell line, Condition and Strain

PRRC2A PRRC2C

1.02e-031971120fa3e4cf93e77d78b1f97b906c5b13ca741ae17e
ToppCellCOVID-19_Mild|World / Disease condition and Cell class

BCLAF1 PRRC2C

1.03e-0319811261ceb2245b6cb58e308b999a61d218c89dbc615e
ToppCellLAM-Endothelial-LymEndo|Endothelial / Condition, Lineage and Cell class

LOX RBM3

1.03e-03198112ba64b1c95dfaa995045239d412e725596f6c482e
ToppCellPBMC_fresh-frozen|World / Compartment, severity and other cell annotations on 10x 3' data (130k)

PRRC2C RBM3

1.03e-03198112dcc223a0396b8b673e4ed8c6733ec6cd74e9a03a
ToppCellPBMC-Mild|PBMC / Location, Disease Group, Cell group, Cell class (2021.03.09)

BCLAF1 PRRC2C

1.03e-0319811244417089b62056269cac38d3134ff209c05b7007
ToppCellNeuron-Postmitotic-Excitatory_Neuron_-Newborn-35|World / Primary Cells by Cluster

BCLAF1 PRRC2C

1.03e-03198112de5214a85fe017eb23d4aa8af624464f062ec57e
ToppCellPBMC|World / Compartment, Disease Groups and Clusters

BCLAF1 RBM3

1.03e-0319811284f5b43dad0c57556171dbc0b799735654582ecf
ToppCellPBMC-Mild|PBMC / Location, Disease Group, Cell group, Cell class and sub_cluster (2021.03.01)

BCLAF1 PRRC2C

1.03e-0319811228ef3fc4c17dcb765537b75917f7db78baa522db
ToppCellmegakaryocytic-CD34+_Megakaryoblast|megakaryocytic / Lineage and Cell class

BCLAF1 PRRC2C

1.04e-0319911299a65887d3c8a2cde26693dd74404b101bba9d58
ToppCellsevere|World / Cohort 1 (10x PBMC) with disease condition, cell group and cell class

BCLAF1 PRRC2C

1.05e-03200112accc618d6b960bff30cb531c1226295bfc8650f6
ToppCellTCGA-Bile_Duct-Primary_Tumor-Cholangiocarcinoma|TCGA-Bile_Duct / Sample_Type by Project: Shred V9

HNRNPUL2 RBM3

1.05e-03200112ad2a6da0b1ae7a9212a3c91e5eec4baa7481d8dc
ToppCellTCGA-Bile_Duct-Primary_Tumor|TCGA-Bile_Duct / Sample_Type by Project: Shred V9

HNRNPUL2 RBM3

1.05e-032001120350e5ffd36033099b7e32a1fdd790fff99790dc
ToppCellmild|World / Cohort 1 (10x PBMC) with disease condition, cell group and cell class

BCLAF1 PRRC2C

1.05e-0320011212f1685ce8f218433068e090c9d839cd5a1910bf
ToppCellBrain_organoid-organoid_Tanaka_cellReport-6m-Neuronal-Intermediate|6m / Sample Type, Dataset, Time_group, and Cell type.

BCLAF1 PRRC2C

1.05e-032001127c261e39ac30b318511373ab7302aa53b8b81b9c
ToppCellSigmoid-Macrophage-LYVE1_Macrophage|Macrophage / Region, Cell class and subclass

PRRC2A RBM3

1.05e-03200112cdb3f242d0c80b4eb9044f59156443e77fb81a1d
ToppCellCOVID-19|World / Disease, condition lineage and cell class

BCLAF1 PRRC2C

1.05e-032001127dec470c379cd89f05a0f37c8628b21f136e52f0
ComputationalNeighborhood of BNIP2

FAM120A RBM3

1.45e-043462GNF2_BNIP2
ComputationalNeighborhood of PPP6C

FAM120A RBM3

1.91e-043962GNF2_PPP6C
ComputationalNeighborhood of DDX5

BCLAF1 RBM3

5.32e-046562GCM_DDX5
Drug3-(2-hydroxy-4-(2-methylnonan-2-yl)phenyl)cyclohexan-1-ol

HNRNPUL2 BCLAF1 LOX RBM3

6.98e-06314104ctd:C572491
DrugFCE 22101

STATH BCLAF1

1.14e-0512102CID000065633
Drug12-MTA

STATH LOX

1.35e-0513102CID000021672
Drugbenzalkonium

STATH BCLAF1 LOX

3.12e-05148103CID000007681
DrugNorethynodrel [68-23-5]; Up 200; 13.4uM; MCF7; HT_HG-U133A

HNRNPUL2 LOX PRRC2C

6.78e-051921031696_UP
DrugFlutamide [13311-84-7]; Down 200; 14.4uM; MCF7; HT_HG-U133A

HNRNPUL2 FAM120A PRRC2C

6.99e-051941034361_DN
Drugpropyl gallate

BCLAF1 LOX

2.55e-0455102CID000004947
Drugpenicillin

STATH BCLAF1

2.64e-0456102CID000002349
DrugAC1L1GIB

STATH BCLAF1

6.66e-0489102CID000003695
Drughygromycin A

STATH LOX

8.40e-04100102CID006433481
Drugdhpta

BCLAF1 LOX

9.08e-04104102CID000018465
DrugAlstonine hydrochloride

HNRNPUL2 STATH

1.13e-03116102CID000023039
Drugpotassium phosphate

STATH LOX

1.23e-03121102CID000024450
Drugtetradecylthioacetic acid

STATH LOX

1.37e-03128102CID000114924
Drug(+/-)-Jasmonic Acid

STATH LOX

2.08e-03158102CID000105087
Drughydroxyapatite

STATH BCLAF1

2.43e-03171102CID000014781
DrugCortisporin

STATH LOX

2.60e-03177102CID000004454
Diseaseanxiety measurement

FAM120A PRRC2A

3.66e-0410882EFO_0009863
Diseaseirritable bowel syndrome

FAM120A PRRC2A

5.38e-0413182EFO_0000555
Diseasehealth study participation

FAM120A PRRC2A

1.19e-0319582EFO_0010130
DiseaseInguinal hernia

PRRC2A LOX

2.54e-0328782HP_0000023
Diseaseplatelet component distribution width

PRRC2A PRRC2C

1.65e-0275582EFO_0007984
DiseaseLiver Cirrhosis, Experimental

LOX RBM3

1.73e-0277482C0023893

Protein segments in the cluster

PeptideGeneStartEntry
RPGGYGYGYGRSRDY

RBM3

121

P98179
PGNRGGYRNFYDRYR

HNRNPUL2

681

Q1KMD3
TFGRGGRYYGRGYKN

FAM120A

996

Q9NZB2
GMRRPYGYRGRGRGY

BCLAF1

66

Q9NYF8
GGRYRPGYGTGYFQY

LOX

196

P28300
SFRRLGYGCGYGGYR

KRTAP19-7

31

Q3SYF9
FLRRIGRFGYGYGPY

STATH

26

P02808
GYYGRERKIGRAGYR

TMC3

211

Q7Z5M5
PDQGYRGRGRGEYYS

PRRC2C

1181

Q9Y520
YFARGRGFRGTYGGR

PRRC2A

1031

P48634
HRYGGGGRYEEYRGR

RBMXL3

771

Q8N7X1