Cluster composition

Functions

CategoryNameIntersectionWithQueryPValueGenesInTermGenesInQueryGenesInTermInQueryID
GeneOntologyCellularComponentSWI/SNF superfamily-type complex

BCL11B EP400 BCL11A DEK

1.57e-0496594GO:0070603
GeneOntologyCellularComponentsarcoplasmic reticulum lumen

CALR HRC

2.78e-049592GO:0033018
GeneOntologyCellularComponentsmooth endoplasmic reticulum

PDIA4 CALR RYR1

2.97e-0446593GO:0005790
GeneOntologyCellularComponentATPase complex

BCL11B EP400 BCL11A DEK

4.84e-04129594GO:1904949
GeneOntologyCellularComponentchromatin

ATP1B4 BCL11B NEUROD1 BBX EP400 ATRX TSHZ2 SUPT16H BCL11A KAT6B NEUROD6 DEK

7.53e-0414805912GO:0000785
HumanPhenoFacial palsy

BCL11B PIEZO2 AMER1 SUPT16H PEX14 AK9 RYR1

3.52e-05232227HP:0010628
HumanPhenoAbnormal seventh cranial physiology

BCL11B PIEZO2 AMER1 SUPT16H PEX14 AK9 RYR1

3.62e-05233227HP:0010827
HumanPhenoWeakness of facial musculature

BCL11B PIEZO2 AMER1 SUPT16H PEX14 AK9 RYR1

9.10e-05269227HP:0030319
HumanPhenoEpicanthus

BCL11B PIEZO2 AMER1 ATRX SUPT16H FGD1 PEX14 BCL11A KAT6B RYR1

1.00e-046142210HP:0000286
HumanPhenoAbnormal cranial nerve morphology

BCL11B PIEZO2 AMER1 ATRX SUPT16H PEX14 AK9 RYR1

1.02e-04375228HP:0001291
MousePhenoabsent sperm axonemal central pair

CFAP43 CFAP44 CFAP65

1.79e-0515493MP:0031352
DomainNeurogenic_DUF

NEUROD1 NEUROD6

6.06e-054602IPR022575
DomainNeuro_bHLH

NEUROD1 NEUROD6

6.06e-054602PF12533
DomainTF_bHLH_NeuroD

NEUROD1 NEUROD6

6.06e-054602IPR016637
DomainSAP

ACIN1 DEK

2.25e-0322602PF02037
DomainSAP

ACIN1 DEK

2.46e-0323602SM00513
DomainSAP

ACIN1 DEK

2.90e-0325602PS50800
DomainSAP_dom

ACIN1 DEK

2.90e-0325602IPR003034
DomainSNF2_N

EP400 ATRX

4.73e-0332602IPR000330
DomainSNF2_N

EP400 ATRX

4.73e-0332602PF00176
DomainER_TARGET

PDIA4 CALR

1.00e-0247602PS00014
DomainWD40

GRWD1 WDR87 CFAP43 CFAP44

1.08e-02268604SM00320
DomainWD40_repeat

GRWD1 WDR87 CFAP43 CFAP44

1.13e-02272604IPR001680
Pubmed

The in vivo Interaction Landscape of Histones H3.1 and H3.3.

PCGF6 BBX HIRIP3 ATRX SLC4A1AP CALR SUPT16H GPATCH11 HMGB3 BOD1L1 DEK DNTTIP2

5.84e-10608611236089195
Pubmed

Mapping the Ku Interactome Using Proximity-Dependent Biotin Identification in Human Cells.

BBX EP400 ATRX SUPT16H GPATCH11 ACIN1 BOD1L1 NCL DNTTIP2

1.65e-0928361930585729
Pubmed

The Nse5/6-like SIMC1-SLF2 complex localizes SMC5/6 to viral replication centers.

ZNF777 BBX EP400 ATRX SLC4A1AP NOC3L SUPT16H ACIN1 HMGB3 BOD1L1 NCL DEK DNTTIP2

8.92e-09954611336373674
Pubmed

Bcl11a (Ctip1) Controls Migration of Cortical Projection Neurons through Regulation of Sema3c.

BCL11B NEUROD1 BCL11A NEUROD6

6.12e-082261426182416
Pubmed

MYC Protein Interactome Profiling Reveals Functionally Distinct Regions that Cooperate to Drive Tumorigenesis.

PCGF6 BBX GRWD1 EP400 NOC3L NCL CLSPN DNTTIP2

1.41e-0733961830415952
Pubmed

The functional interactome of PYHIN immune regulators reveals IFIX is a sensor of viral DNA.

PDIA4 BCL11B GRWD1 ATRX NOC3L SUPT16H BCL11A DNTTIP2

1.76e-0734961825665578
Pubmed

Dab1 contributes differently to the morphogenesis of the hippocampal subdivisions.

BCL11B NEUROD1 NEUROD6

6.11e-071061328945921
Pubmed

A novel cell migratory zone in the developing hippocampal formation.

BCL11B NEUROD1 NEUROD6

6.11e-071061324771490
Pubmed

Defining the proximal interaction networks of Arf GTPases reveals a mechanism for the regulation of PLD1 and PI4KB.

AMER1 BBX HIRIP3 EP400 NOC3L PEX14 PODXL2 NCL CLSPN IGSF3

9.43e-07777611035844135
Pubmed

In vitro nuclear interactome of the HIV-1 Tat protein.

BCL11B EP400 SUPT16H ACIN1 NCL DNTTIP2

1.24e-0619561619454010
Pubmed

A dual function of Bcl11b/Ctip2 in hippocampal neurogenesis.

BCL11B NEUROD1 NEUROD6

1.45e-061361322588081
Pubmed

Comprehensive interactome profiling of the human Hsp70 network highlights functional differentiation of J domains.

PDIA4 PCGF6 FAM193A GRWD1 ATRX SLC4A1AP CALR NOC3L SUPT16H NCL DEK NBR1 DNTTIP2

1.46e-061487611333957083
Pubmed

Novel Mutations in CFAP44 and CFAP43 Cause Multiple Morphological Abnormalities of the Sperm Flagella (MMAF).

CFAP43 CFAP44

3.03e-06261229277146
Pubmed

COUP-TF (chicken ovalbumin upstream promoter transcription factor)-interacting protein 1 (CTIP1) is a sequence-specific DNA binding protein.

BCL11B BCL11A

3.03e-06261212196208
Pubmed

Neuronal basic helix-loop-helix proteins (NEX and BETA2/Neuro D) regulate terminal granule cell differentiation in the hippocampus.

NEUROD1 NEUROD6

3.03e-06261210804213
Pubmed

The BCL11 gene family: involvement of BCL11A in lymphoid malignancies.

BCL11B BCL11A

3.03e-06261211719382
Pubmed

CTIP1 and CTIP2 are differentially expressed during mouse embryogenesis.

BCL11B BCL11A

3.03e-06261215465497
Pubmed

Mutations in CFAP43 and CFAP44 cause male infertility and flagellum defects in Trypanosoma and human.

CFAP43 CFAP44

3.03e-06261229449551
Pubmed

NovelCFAP43 andCFAP44 mutations cause male infertility with multiple morphological abnormalities of the sperm flagella (MMAF).

CFAP43 CFAP44

3.03e-06261230904354
Pubmed

Biallelic Mutations in CFAP43 and CFAP44 Cause Male Infertility with Multiple Morphological Abnormalities of the Sperm Flagella.

CFAP43 CFAP44

3.03e-06261228552195
Pubmed

DCAF8, a novel MuRF1 interaction partner, promotes muscle atrophy.

PCGF6 BBX SHFL USP35 FAM9A ITGAE DEK

3.49e-0636461731391242
Pubmed

SETD1A Methyltransferase Is Physically and Functionally Linked to the DNA Damage Repair Protein RAD18.

HIRIP3 SLC4A1AP SUPT16H ACIN1 BOD1L1 NCL

5.30e-0625161631076518
Pubmed

FOXG1 Orchestrates Neocortical Organization and Cortico-Cortical Connections.

BCL11B NEUROD1 NEUROD6

5.73e-062061330392794
Pubmed

Gain of Additional BIRC3 Protein Functions through 3'-UTR-Mediated Protein Complex Formation.

PDIA4 GRWD1 ATRX CALR NOC3L SUPT16H ACIN1 BOD1L1 NCL DEK NBR1 DNTTIP2

5.79e-061425611230948266
Pubmed

HIV-1 Vpr induces cell cycle arrest and enhances viral gene expression by depleting CCDC137.

ATRX NOC3L ACIN1 NCL DNTTIP2

6.40e-0614861532538781
Pubmed

Ctip1 Regulates the Balance between Specification of Distinct Projection Neuron Subtypes in Deep Cortical Layers.

BCL11B BCL11A NEUROD6

7.72e-062261327117402
Pubmed

MYC multimers shield stalled replication forks from RNA polymerase.

GRWD1 SLC4A1AP NOC3L SUPT16H ACIN1 BOD1L1 NCL CLSPN DEK DNTTIP2

8.00e-06989611036424410
Pubmed

Creation of knock out and knock in mice by CRISPR/Cas9 to validate candidate genes for human male infertility, interest, difficulties and feasibility.

CFAP43 CFAP44

9.07e-06361229522859
Pubmed

Regulation of pulmonary fibrosis by chemokine receptor CXCR3.

BCL11B BCL11A

9.07e-06361215254596
Pubmed

Proteomic Analysis of the EWS-Fli-1 Interactome Reveals the Role of the Lysosome in EWS-Fli-1 Turnover.

PDIA4 GRWD1 SLC4A1AP CALR SUPT16H GPATCH11 HMGB3

9.57e-0642561724999758
Pubmed

A bead-based approach for large-scale identification of in vitro kinase substrates.

HIRIP3 SLC4A1AP ACIN1 NCL DEK

1.02e-0516361522113938
Pubmed

Zbtb20 modulates the sequential generation of neuronal layers in developing cortex.

BCL11B NEUROD1 NEUROD6

1.15e-052561327282384
Pubmed

H4K20me0 recognition by BRCA1-BARD1 directs homologous recombination to sister chromatids.

PCGF6 BBX GRWD1 HIRIP3 EP400 ATRX SUPT16H ACIN1 NCL DEK DNTTIP2

1.37e-051294611130804502
Pubmed

Histone methylation mediated by NSD1 is required for the establishment and maintenance of neuronal identities.

BCL11B NEUROD6 RYR1

1.46e-052761337995181
Pubmed

Conditional Inactivation of Pen-2 in the Developing Neocortex Leads to Rapid Switch of Apical Progenitors to Basal Progenitors.

BCL11B NEUROD1 NEUROD6

1.46e-052761330692224
Pubmed

Regulation of archicortical arealization by the transcription factor Zbtb20.

BCL11B NEUROD1 NEUROD6

1.63e-052861322689450
Pubmed

Dynamic Protein Interactions of the Polycomb Repressive Complex 2 during Differentiation of Pluripotent Cells.

EP400 ATRX SUPT16H GPATCH11 ACIN1 BOD1L1 DEK

1.80e-0546961727634302
Pubmed

Systemic and intrinsic functions of ATRX in glial cell fate and CNS myelination in male mice.

ATRX NEUROD6

1.81e-05461237925436
Pubmed

NeuroD factors regulate cell fate and neurite stratification in the developing retina.

NEUROD1 NEUROD6

1.81e-05461221593321
Pubmed

p57Kip2 is a repressor of Mash1 activity and neuronal differentiation in neural stem cells.

NEUROD1 NEUROD6

1.81e-05461219590511
Pubmed

Human very-long-chain acyl-CoA synthetase: cloning, topography, and relevance to branched-chain fatty acid metabolism.

CALR PEX14

1.81e-05461210198260
Pubmed

Developmental cell death of cortical projection neurons is controlled by a Bcl11a/Bcl6-dependent pathway.

BCL11B BCL11A

1.81e-05461235766181
Pubmed

Oligogenic heterozygous inheritance of sperm abnormalities in mouse.

CFAP43 CFAP44

1.81e-05461235451961
Pubmed

Stimulation of NeuroD activity by huntingtin and huntingtin-associated proteins HAP1 and MLK2.

NEUROD1 HAP1

1.81e-05461212881483
Pubmed

Isolation of a novel family of C(2)H(2) zinc finger proteins implicated in transcriptional repression mediated by chicken ovalbumin upstream promoter transcription factor (COUP-TF) orphan nuclear receptors.

BCL11B BCL11A

1.81e-05461210744719
Pubmed

The protein interaction landscape of the human CMGC kinase group.

HIRIP3 EP400 SLC4A1AP NOC3L SUPT16H ACIN1 NCL GOLGA2

2.83e-0569561823602568
Pubmed

Menin and Menin-Associated Proteins Coregulate Cancer Energy Metabolism.

GRWD1 EP400 NOC3L SUPT16H ACIN1 KAT6B

3.00e-0534161632971831
Pubmed

Sip1 downstream Effector ninein controls neocortical axonal growth, ipsilateral branching, and microtubule growth and stability.

BCL11B NEUROD6

3.02e-05561225741725
Pubmed

Enhanced Axonal Extension of Subcortical Projection Neurons Isolated from Murine Embryonic Cortex using Neuropilin-1.

BCL11B NEUROD1

3.02e-05561228507510
Pubmed

A novel von Willebrand disease-causing mutation (Arg273Trp) in the von Willebrand factor propeptide that results in defective multimerization and secretion.

PDIA4 CALR

3.02e-05561210887119
Pubmed

Loss of BETA2/NeuroD leads to malformation of the dentate gyrus and epilepsy.

NEUROD1 NEUROD6

3.02e-05561210639171
Pubmed

NuRD subunit CHD4 regulates super-enhancer accessibility in rhabdomyosarcoma and represents a general tumor dependency.

BCL11B SUPT16H ACIN1 BCL11A

3.32e-0510361432744500
Pubmed

N-Terminal Acetyltransferase Naa40p Whereabouts Put into N-Terminal Proteoform Perspective.

FAM193A EP400 ATRX NOC3L ACIN1 PEX14 BOD1L1 NCL DNTTIP2

3.47e-0593461933916271
Pubmed

Interaction network of human early embryonic transcription factors.

PDIA4 PCGF6 BCL11B EP400 CALR BCL11A

3.52e-0535161638297188
Pubmed

In-Depth In Vivo Crosslinking in Minutes by a Compact, Membrane-Permeable, and Alkynyl-Enrichable Crosslinker.

PDIA4 AMER1 BBX ATRX NOC3L SUPT16H ACIN1 HMGB3 BOD1L1 NCL DNTTIP2

3.72e-051442611135575683
Pubmed

Interactome Rewiring Following Pharmacological Targeting of BET Bromodomains.

BBX ATRX SUPT16H ACIN1 HMGB3 DEK DNTTIP2

4.07e-0553361730554943
Pubmed

Multiple molecular chaperones interact with apolipoprotein B during its maturation. The network of endoplasmic reticulum-resident chaperones (ERp72, GRP94, calreticulin, and BiP) interacts with apolipoprotein b regardless of its lipidation state.

PDIA4 CALR

4.52e-0566129694898
Pubmed

Proteomic and bioinformatic analysis of mammalian SWI/SNF complexes identifies extensive roles in human malignancy.

BCL11B BCL11A

4.52e-05661223644491
Pubmed

Delayed cortical development in mice with a neural specific deletion of β1 integrin.

BCL11A NEUROD6

4.52e-05661237250402
Pubmed

Proteomic mapping of the human mitochondrial intermembrane space in live cells via ratiometric APEX tagging.

CALR NBR1

4.52e-05661225002142
Pubmed

Strict in vivo specificity of the Bcl11a erythroid enhancer.

BCL11B BCL11A

6.32e-05761227707736
Pubmed

Wdr47 Controls Neuronal Polarization through the Camsap Family Microtubule Minus-End-Binding Proteins.

BCL11B NEUROD6

6.32e-05761232320668
Pubmed

Nascent lipidated apolipoprotein B is transported to the Golgi as an incompletely folded intermediate as probed by its association with network of endoplasmic reticulum molecular chaperones, GRP94, ERp72, BiP, calreticulin, and cyclophilin B.

PDIA4 CALR

6.32e-05761212397072
Pubmed

Spatiotemporal-resolved protein networks profiling with photoactivation dependent proximity labeling.

SLC4A1AP ACIN1 HMGB3 BOD1L1 NCL DEK

7.16e-0539961635987950
Pubmed

Identification of proteins associated with ligand-activated estrogen receptor α in human breast cancer cell nuclei by tandem affinity purification and nano LC-MS/MS.

EP400 SUPT16H NCL DEK GOLGA2

7.18e-0524561521182205
Pubmed

Therapeutic targeting of the USP2-E2F4 axis inhibits autophagic machinery essential for zinc homeostasis in cancer progression.

PDIA4 GRWD1 CALR SUPT16H ACIN1 PEX14

7.56e-0540361635253629
Pubmed

The mRNA-bound proteome and its global occupancy profile on protein-coding transcripts.

GRWD1 NOC3L SUPT16H ACIN1 HMGB3 NCL DEK DNTTIP2

8.07e-0580761822681889
Pubmed

Wnt regulation: exploring Axin-Disheveled interactions and defining mechanisms by which the SCF E3 ubiquitin ligase is recruited to the destruction complex.

AMER1 GRWD1 NOC3L ACIN1 PEX14 BOD1L1 NCL GOLGA2

8.21e-0580961832129710
Pubmed

Dlx1&2 and Mash1 transcription factors control MGE and CGE patterning and differentiation through parallel and overlapping pathways.

BCL11B TSHZ2 BCL11A NEUROD6

8.25e-0513061419386638
Pubmed

Ntf3 acts downstream of Sip1 in cortical postmitotic neurons to control progenitor cell fate through feedback signaling.

BCL11B NEUROD6

8.42e-05861225085976
Pubmed

Cohesin-dependence of neuronal gene expression relates to chromatin loop length.

BCL11B NEUROD6

8.42e-05861235471149
Pubmed

CHD3 and CHD4 form distinct NuRD complexes with different yet overlapping functionality.

BCL11B NOC3L SUPT16H ACIN1 NCL BCL11A DEK

9.01e-0560561728977666
Pubmed

Dlx1&2 and Mash1 transcription factors control striatal patterning and differentiation through parallel and overlapping pathways.

BCL11B TSHZ2 BCL11A NEUROD6

9.27e-0513461419030180
Pubmed

The Specification of Cortical Subcerebral Projection Neurons Depends on the Direct Repression of TBR1 by CTIP1/BCL11a.

BCL11B BCL11A

1.08e-04961225972180
Pubmed

Survival of a Novel Subset of Midbrain Dopaminergic Neurons Projecting to the Lateral Septum Is Dependent on NeuroD Proteins.

NEUROD1 NEUROD6

1.08e-04961228130357
Pubmed

ATRX is required for maintenance of the neuroprogenitor cell pool in the embryonic mouse brain.

BCL11B ATRX

1.08e-04961225395668
Pubmed

Neural-specific deletion of the focal adhesion adaptor protein paxillin slows migration speed and delays cortical layer formation.

BCL11B BCL11A

1.08e-04961228935710
Pubmed

Reciprocal interaction between SIRT6 and APC/C regulates genomic stability.

EP400 ATRX NOC3L SUPT16H NCL DNTTIP2

1.22e-0444061634244565
Pubmed

The CB(1) cannabinoid receptor drives corticospinal motor neuron differentiation through the Ctip2/Satb2 transcriptional regulation axis.

BCL11B NEUROD6

1.35e-041061223175820
Pubmed

ADF/cofilin-mediated actin retrograde flow directs neurite formation in the developing brain.

BCL11B NEUROD6

1.35e-041061223259946
Pubmed

Human antigen R-regulated mRNA metabolism promotes the cell motility of migrating mouse neurons.

BCL11B NEUROD6

1.35e-041061232098764
Pubmed

BCL11B functionally associates with the NuRD complex in T lymphocytes to repress targeted promoter.

BCL11B BCL11A

1.35e-041061216091750
Pubmed

Functional proteomics establishes the interaction of SIRT7 with chromatin remodeling complexes and expands its role in regulation of RNA polymerase I transcription.

PDIA4 CALR NOC3L CUL9 ACIN1 NCL DNTTIP2

1.44e-0465361722586326
Pubmed

The functional interactome landscape of the human histone deacetylase family.

BCL11B BBX ACIN1 BCL11A DNTTIP2

1.56e-0428961523752268
Pubmed

Conservation of the Notch signalling pathway in mammalian neurogenesis.

NEUROD1 NCL

1.65e-04116129102301
Pubmed

Suppression of DNA Double-Strand Break Formation by DNA Polymerase β in Active DNA Demethylation Is Required for Development of Hippocampal Pyramidal Neurons.

BCL11B NEUROD6

1.65e-041161233087478
Pubmed

Oxidative stress regulates progenitor behavior and cortical neurogenesis.

BCL11B NEUROD6

1.65e-041161232041791
Pubmed

Long non-coding RNA LncKdm2b regulates cortical neuronal differentiation by cis-activating Kdm2b.

BCL11B NEUROD1

1.65e-041161231317506
Pubmed

Targeted ubiquitination and degradation of G-protein-coupled receptor kinase 5 by the DDB1-CUL4 ubiquitin ligase complex.

GRWD1 CALR ACIN1 NCL

1.67e-0415661422952844
Pubmed

The Epigenetic Factor Landscape of Developing Neocortex Is Regulated by Transcription Factors Pax6→ Tbr2→ Tbr1.

BCL11B EP400 ATRX KAT6B

1.71e-0415761430186101
Pubmed

Multiplexed kinase interactome profiling quantifies cellular network activity and plasticity.

PCGF6 HIRIP3 ATRX SUPT16H CLSPN DEK GOLGA2 DNTTIP2

1.84e-0491061836736316
Pubmed

Mapping the Hrc gene to proximal mouse chromosome 7: delineation of a conserved linkage group with human 19q.

HRC RYR1

1.97e-04126128288260
Pubmed

In vivo Atoh1 targetome reveals how a proneural transcription factor regulates cerebellar development.

NEUROD1 NEUROD6

1.97e-041261221300888
Pubmed

Ezh2, the histone methyltransferase of PRC2, regulates the balance between self-renewal and differentiation in the cerebral cortex.

BCL11B SHFL BCAN

1.98e-046461320798045
Pubmed

Loss of BAF (mSWI/SNF) Complexes Causes Global Transcriptional and Chromatin State Changes in Forebrain Development.

BCL11B NEUROD1 NEUROD6

2.08e-046561326655900
Pubmed

Myotubularin-related proteins 3 and 4 interact with polo-like kinase 1 and centrosomal protein of 55 kDa to ensure proper abscission.

SLC4A1AP SUPT16H ACIN1 CLSPN

2.16e-0416761425659891
Pubmed

UIF, a New mRNA export adaptor that works together with REF/ALY, requires FACT for recruitment to mRNA.

SUPT16H NCL

2.33e-041361219836239
Pubmed

Usp11 controls cortical neurogenesis and neuronal migration through Sox11 stabilization.

BCL11B NEUROD6

2.33e-041361233579706
Pubmed

Lifelong persistence of nuclear RNAs in the mouse brain.

BCL11B NEUROD1

2.33e-041361238574132
Pubmed

Temporal Control of Mammalian Cortical Neurogenesis by m6A Methylation.

BCL11B NEUROD1

2.33e-041361228965759
InteractionCBX3 interactions

PCGF6 AMER1 BBX EP400 ATRX SLC4A1AP CALR SUPT16H HMGB3 CLSPN DEK DNTTIP2

4.40e-076466112int:CBX3
InteractionH3-3A interactions

PCGF6 BBX HIRIP3 ATRX SLC4A1AP SUPT16H GPATCH11 HMGB3 BOD1L1 NCL DEK DNTTIP2

2.08e-067496112int:H3-3A
InteractionSMC5 interactions

ZNF777 BBX EP400 ATRX SLC4A1AP NOC3L SUPT16H ACIN1 HMGB3 BOD1L1 NCL DEK DNTTIP2

7.29e-0610006113int:SMC5
InteractionH3C1 interactions

PCGF6 PIEZO2 BBX GRWD1 ATRX WDR87 NOC3L SUPT16H HMGB3 KAT6B DEK DNTTIP2

1.36e-059016112int:H3C1
InteractionPOLR1G interactions

BBX GRWD1 EP400 SLC4A1AP NOC3L SUPT16H NCL CLSPN DNTTIP2

1.53e-05489619int:POLR1G
InteractionH3C3 interactions

PCGF6 BBX ATRX CALR SUPT16H HMGB3 BOD1L1 DEK DNTTIP2

1.69e-05495619int:H3C3
InteractionH2AB2 interactions

ZNF777 BBX NOC3L SUPT16H NCL

1.80e-05107615int:H2AB2
InteractionH1-2 interactions

PDIA4 GRWD1 EP400 ATRX SLC4A1AP NOC3L BOD1L1 NCL DNTTIP2 IGSF3

2.86e-056666110int:H1-2
InteractionTEX15 interactions

SUPT16H NCL GOLGA2

4.48e-0523613int:TEX15
InteractionNOP56 interactions

PDIA4 HIRIP3 ATRX CALR NOC3L SUPT16H NCL DEK DNTTIP2

5.09e-05570619int:NOP56
InteractionH2BC8 interactions

BBX HIRIP3 EP400 ATRX SLC4A1AP SUPT16H HMGB3 DEK DNTTIP2

5.51e-05576619int:H2BC8
InteractionH2BC9 interactions

HIRIP3 ATRX SUPT16H CUL9 KAT6B CFAP44 DEK GOLGA2

5.70e-05446618int:H2BC9
InteractionZNF330 interactions

BBX SLC4A1AP NOC3L SUPT16H HMGB3 NCL DEK DNTTIP2

5.70e-05446618int:ZNF330
InteractionCENPA interactions

BBX HIRIP3 ATRX NOC3L SUPT16H DEK DNTTIP2

1.39e-04377617int:CENPA
InteractionEGR2 interactions

PCGF6 BCL11B EP400 BCL11A GOLGA2

1.68e-04171615int:EGR2
CoexpressionMENON_FETAL_KIDNEY_0_CAP_MESENCHYME_CELLS

ATRX SUPT16H NCL KAT6B DEK

2.18e-0690615M39250
CoexpressionBENPORATH_ES_CORE_NINE_CORRELATED

BCL11B CALR HMGB3 BCL11A DEK

3.67e-06100615M14079
CoexpressionZHONG_PFC_C5_BCL11B_CALB2_POS_INP

BCL11B KAT6B NEUROD6

1.79e-0522613M39085
CoexpressionAtlasFacebaseRNAseq_e10.5_Neural Epithelium Flanking Eminence_top-relative-expression-ranked_1000_k-means-cluster#2

FAM193A HIRIP3 ATRX SUPT16H BOD1L1 NCL BCL11A CLSPN DEK

2.46e-07311619Facebase_RNAseq_e10.5_Neural Epithelium Flanking Eminence_1000_K2
CoexpressionAtlasFacebaseRNAseq_e10.5_Neural Epithelium Flanking Eminence_top-relative-expression-ranked_2500_k-means-cluster#5

FAM193A HIRIP3 ATRX SLC4A1AP SUPT16H GPATCH11 FGD1 BOD1L1 NCL BCL11A CLSPN DEK

3.55e-068316112Facebase_RNAseq_e10.5_Neural Epithelium Flanking Eminence_2500_K5
CoexpressionAtlasFacebaseRNAseq_e10.5_Neural Epithelium Flanking Eminence_top-relative-expression-ranked_1000

PKNOX2 PCGF6 FAM193A HIRIP3 ATRX HAP1 SUPT16H BOD1L1 NCL BCL11A CLSPN DEK

2.05e-059896112Facebase_RNAseq_e10.5_Neural Epithelium Flanking Eminence_1000
CoexpressionAtlasfacebase_RNAseq_e10.5_Emin_LatNas_2500_K3

PKNOX2 FAM193A HIRIP3 ATRX SLC4A1AP SUPT16H HMGB3 BOD1L1 NCL BCL11A CLSPN DEK DNTTIP2

4.71e-0512576113facebase_RNAseq_e10.5_Emin_LatNas_2500_K3
CoexpressionAtlasFacebaseRNAseq_e8.5_Floor Plate_top-relative-expression-ranked_2500_k-means-cluster#1

BBX ATRX SUPT16H HMGB3 NCL CLSPN DEK DNTTIP2

5.63e-05469618Facebase_RNAseq_e8.5_Floor Plate_2500_K1
CoexpressionAtlasFacebaseRNAseq_e10.5_Lateral Nasal Eminence_top-relative-expression-ranked_2500_k-means-cluster#1

FAM193A ATRX SLC4A1AP CALR SUPT16H GPATCH11 FGD1 NCL BCL11A CLSPN

6.98e-057806110Facebase_RNAseq_e10.5_Lateral Nasal Eminence_2500_K1
CoexpressionAtlasFacebaseRNAseq_e10.5_Neural Epithelium Overlying Central Eminence_top-relative-expression-ranked_1000

PKNOX2 PCGF6 BCL11B HIRIP3 ATRX POLR3GL HAP1 SUPT16H BCL11A CLSPN DEK

1.01e-049866111Facebase_RNAseq_e10.5_Neural Epithelium Overlying Central Eminence_1000
CoexpressionAtlasFacebaseRNAseq_e10.5_Maxillary Arch_top-relative-expression-ranked_1000

ZMYND15 BCL11B BBX ATRX POLR3GL HAP1 BOD1L1 NCL BCL11A CLSPN DEK

1.04e-049896111Facebase_RNAseq_e10.5_Maxillary Arch_1000
CoexpressionAtlasFacebaseRNAseq_e10.5_Medial Nasal Eminence_top-relative-expression-ranked_1000_k-means-cluster#4

ATRX TSHZ2 POLR3GL NCL BCL11A CLSPN

2.11e-04298616Facebase_RNAseq_e10.5_Medial Nasal Eminence_1000_K4
CoexpressionAtlasfacebase_RNAseq_e10.5_Emin_LatNas_2500

PKNOX2 FAM193A HIRIP3 ATRX SLC4A1AP SUPT16H HMGB3 BOD1L1 NCL BCL11A CLSPN DEK DNTTIP2

2.12e-0414596113facebase_RNAseq_e10.5_Emin_LatNas_2500
CoexpressionAtlasFacebaseRNAseq_e10.5_Neural Epithelium Flanking Eminence_top-relative-expression-ranked_500_k-means-cluster#3

ATRX SUPT16H NCL CLSPN DEK

2.26e-04192615Facebase_RNAseq_e10.5_Neural Epithelium Flanking Eminence_500_K3
CoexpressionAtlasFacebaseRNAseq_e10.5_Lateral Nasal Eminence_top-relative-expression-ranked_500_k-means-cluster#4

ATRX SUPT16H NCL BCL11A CLSPN

2.26e-04192615Facebase_RNAseq_e10.5_Lateral Nasal Eminence_500_K4
ToppCellPND03-Immune-Immune_Myeloid-DC-cDC1-cDC1_prolif|PND03 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif

ZMYND15 CLSPN ITGAE NACAD RYR1

2.39e-06156615af47a4b17342bdb3cb62d7e2d52a81168e588629
ToppCellfacs-Brain_Non-Myeloid-Cortex-24m-Epithelial|Brain_Non-Myeloid / Brain_Non-Myeloid_Brain_Myeloid - method, tissue, subtissue, age, lineage, cell ontology and free annotation

BCL11A CFAP43 CLSPN CFAP44 CCDC180

4.56e-061786156178706db4a855d72abc156537604d575624df56
ToppCellfacs-Brain_Non-Myeloid-Cortex-24m-Epithelial-nan|Brain_Non-Myeloid / Brain_Non-Myeloid_Brain_Myeloid - method, tissue, subtissue, age, lineage, cell ontology and free annotation

BCL11A CFAP43 CLSPN CFAP44 CCDC180

4.56e-06178615f02076ece0fa899e620971c887ad4da7f48684ed
ToppCellE18.5-Epithelial-Epithelial_Airway-Ciliated/Deuterosomal-Ciliated|E18.5 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif

AK9 CFAP43 CFAP44 CCDC180 CFAP65

5.35e-06184615797b6a6d6f6aafae98f75ca8bffe8263f8d3ff9b
ToppCellE18.5-Epithelial-Epithelial_Airway-Ciliated/Deuterosomal-Ciliated-Ciliated_mature|E18.5 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif

AK9 CFAP43 CFAP44 CCDC180 CFAP65

5.35e-0618461577d5b60a20b277f589b18f7a131142a7ef2dac17
ToppCellPND28-Epithelial-Epithelial_Airway|PND28 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif

AK9 CFAP43 CFAP44 CCDC180 CFAP65

5.79e-06187615f777dd5eb5ccd554ebe1ed60a738b5dd45e18bb9
ToppCellEpithelial-Epithelial-D_(Ciliated)|Epithelial / shred on cell class and cell subclass (v4)

AK9 CFAP43 CFAP44 CCDC180 CFAP65

5.94e-061886158f30535a32968a81a304315a49c0d90a77d36948
ToppCellPND01-Epithelial-Epithelial_Airway-Ciliated/Deuterosomal-Ciliated-Ciliated_mature|PND01 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif

AK9 CFAP43 CFAP44 CCDC180 CFAP65

6.10e-06189615b55de812043b670cbde810d7d42f45909b6d66ef
ToppCellPND10-Epithelial-Epithelial_Airway-Ciliated/Deuterosomal-Ciliated-Ciliated_mature|PND10 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif

AK9 CFAP43 CFAP44 CCDC180 CFAP65

6.10e-0618961502c6128a9ab5818e0881dcadafdad5f08b9a67cf
ToppCellPND28-Epithelial-Epithelial_Airway-Ciliated/Deuterosomal-Ciliated-Ciliated_mature|PND28 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif

AK9 CFAP43 CFAP44 CCDC180 CFAP65

6.10e-06189615fa1ff8b7fa53f3148d9117d6e598097f03af5eb2
ToppCellPND10-Epithelial-Epithelial_Airway-Ciliated/Deuterosomal-Ciliated|PND10 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif

AK9 CFAP43 CFAP44 CCDC180 CFAP65

6.10e-06189615164ea92ff6a1aa2ead1c9b8f64f99a9d65437232
ToppCellPND10-Epithelial-Epithelial_Airway|PND10 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif

AK9 CFAP43 CFAP44 CCDC180 CFAP65

6.10e-06189615407d8a59969d83f014600aae1a55092283a13970
ToppCellEpithelial-D_(Ciliated)|World / shred on cell class and cell subclass (v4)

AK9 CFAP43 CFAP44 CCDC180 CFAP65

6.10e-061896150bf560b595c7a8450a46bc821b742b67965bd9f9
ToppCellPND28-Epithelial-Epithelial_Airway-Ciliated/Deuterosomal|PND28 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif

AK9 CFAP43 CFAP44 CCDC180 CFAP65

6.10e-06189615565063f9e3dd79164321f8a394bd12c176baf202
ToppCellPND10-Epithelial-Epithelial_Airway-Ciliated/Deuterosomal|PND10 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif

AK9 CFAP43 CFAP44 CCDC180 CFAP65

6.10e-06189615a85099bd598a27ee64ee0664d051d89fa8d62fc9
ToppCellPND28-Epithelial-Epithelial_Airway-Ciliated/Deuterosomal-Ciliated|PND28 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif

AK9 CFAP43 CFAP44 CCDC180 CFAP65

6.10e-06189615497be236848ebf5ad75d1f0c71e6261f5d3521da
ToppCellPND01-Epithelial-Epithelial_Airway-Ciliated/Deuterosomal-Ciliated|PND01 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif

AK9 CFAP43 CFAP44 CCDC180 CFAP65

6.10e-061896154e83e49d1265ffe507fdb72924c77c4d1c73f0bd
ToppCellPND14-Epithelial-Epithelial_Airway-Ciliated/Deuterosomal-Ciliated|PND14 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif

AK9 CFAP43 CFAP44 CCDC180 CFAP65

6.26e-06190615088e3f39a1e5e11354d6e7458e8e6a39f14936b3
ToppCellPND14-Epithelial-Epithelial_Airway-Ciliated/Deuterosomal|PND14 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif

AK9 CFAP43 CFAP44 CCDC180 CFAP65

6.26e-0619061535248a8be476ea8d06d67c3d98a25be1f7c150b7
ToppCellPND14-Epithelial-Epithelial_Airway-Ciliated/Deuterosomal-Ciliated-Ciliated_mature|PND14 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif

AK9 CFAP43 CFAP44 CCDC180 CFAP65

6.26e-061906155f5206f9e725070d865f4c891ff08bb750e58582
ToppCellE18.5-Epithelial-Epithelial_Airway-Ciliated/Deuterosomal|E18.5 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif

AK9 CFAP43 CFAP44 CCDC180 CFAP65

6.42e-06191615acd844b477a069b2dcf07b2998e1b5c87dc0eb94
ToppCellPND03-Epithelial-Epithelial_Airway-Ciliated/Deuterosomal-Ciliated|PND03 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif

AK9 CFAP43 CFAP44 CCDC180 CFAP65

6.42e-06191615bda8faf92495c8b362850c0aff4fc6fbdd9c563b
ToppCellPND03-Epithelial-Epithelial_Airway-Ciliated/Deuterosomal-Ciliated-Ciliated_mature|PND03 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif

AK9 CFAP43 CFAP44 CCDC180 CFAP65

6.42e-061916156880fb348bb0915db9a5da4f3566ca9ff93ed258
ToppCellE16.5-Epithelial-Epithelial_Airway-Ciliated/Deuterosomal|E16.5 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif

AK9 CFAP43 CFAP44 CCDC180 CFAP65

6.42e-061916151e21de183a9c09cfb6aad3f9b948087fb6bad061
ToppCellE17.5-Epithelial-epithelial_progenitor_cell-epi_progenitor|E17.5 / developmental_time, Lineage, Cell group, Cell type, Cell type_cellcyc-phase

BCL11B HIRIP3 HAP1 CLSPN DEK

6.42e-06191615328b98d371a7d6b6a1adc61ded05a3e52a839894
ToppCellE16.5-Epithelial-Epithelial_Airway|E16.5 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif

AK9 CFAP43 CFAP44 CCDC180 CFAP65

6.58e-06192615bb7eb51bc079acacde42d8e55ba06d03eba2ea28
ToppCellPND03-Epithelial-Epithelial_Airway-Ciliated/Deuterosomal|PND03 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif

AK9 CFAP43 CFAP44 CCDC180 CFAP65

6.58e-06192615b5cdc2dae3154b1e4ade88f841f38584402ffe33
ToppCellE16.5-Epithelial-Epithelial_Airway-Ciliated/Deuterosomal-Deuterosomal|E16.5 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif

AK9 CFAP43 CFAP44 CCDC180 CFAP65

6.58e-06192615a50a6279371b3be682e334082637b7ab76b9a6e5
ToppCellPND03-Epithelial-Epithelial_Airway|PND03 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif

AK9 CFAP43 CFAP44 CCDC180 CFAP65

6.58e-061926152d8d5a38e205339eda9c8aca1ca9ba3dcbe5ae56
ToppCellChildren_(3_yrs)-Mesenchymal|Children_(3_yrs) / Lineage, Cell type, age group and donor

PKNOX2 VGLL3 PIEZO2 TSHZ2 PODN

7.28e-06196615bc94909f9b2dc08a59eef1914148b69720569c8f
ToppCell3'-Parenchyma_lung-Epithelial-Airway_ciliated-ciliated_columnar_cell_of_tracheobronchial_tree-Multiciliated_(non-nasal)-Multiciliated_(non-nasal)_L.0.3.2.2|3' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5

AK9 CFAP43 CFAP44 CCDC180 CFAP65

7.46e-0619761574a2c6cb8fcfe53dd9a2b36492a16c58f38e51c9
ToppCellBrain_organoid-organoid_Kanton_Nature-Organoid-2M-IPC_like|Organoid-2M / Sample Type, Dataset, Time_group, and Cell type.

BCL11B NEUROD1 BCL11A KAT6B NEUROD6

7.64e-061986156d12ecaa9532c134d9c4562534dcb59a6420b4d3
ToppCellCOVID-19-lung-Fibroblast|COVID-19 / Disease (COVID-19 only), tissue and cell type

PKNOX2 VGLL3 PIEZO2 TSHZ2 PODN

7.64e-061986153ec01a55ade5e1627258cc3cfebb2c3207a4cb43
ToppCellcritical-Epithelial-Ciliated|Epithelial / Severity, Lineage and Cell class of Nasopharyngeal (NS) Samples from Patients and Controls

AK9 CFAP43 CFAP44 CCDC180 CFAP65

7.64e-06198615ee2c8385c0bf4ea9f5c9517b52cf131af3fbdd40
ToppCell10x_3'_v2v3-Neoplastic-Stem-like-OPC-like-OPC-like_Prolif|10x_3'_v2v3 / Platform, Oncotype, Lineage, Cell_class, celltype (level4), mutation group

HMGB3 PODXL2 BCAN CLSPN DEK

7.64e-0619861506888fe2d42ac66ac12157608becd42764e0d034
ToppCellBrain_organoid-organoid_Kanton_Nature-Organoid-2M-IPC_like-IPs_and_early_cortical_neurons|Organoid-2M / Sample Type, Dataset, Time_group, and Cell type.

BCL11B NEUROD1 BCL11A KAT6B NEUROD6

7.64e-061986157943e4f67c3d6efb5c8b00aa0ff3cfe7be10c48d
ToppCellAdult-Mesenchymal|Adult / Lineage, Cell type, age group and donor

PKNOX2 VGLL3 PIEZO2 TSHZ2 PODN

7.64e-0619861526e55b409db2a1637c95fae7c54b0abea1ef550c
ToppCellCOVID-19-lung-Fibroblast|lung / Disease (COVID-19 only), tissue and cell type

PKNOX2 VGLL3 PIEZO2 TSHZ2 PODN

7.64e-06198615df3de77216f5c5d6141ec44d01c56b942f611838
ToppCell10x3'2.3-week_17-19-Lymphocytic_B-B_lineage-pre_pro_B_progenitor|week_17-19 / cell types per 3 fetal stages;per 3',per 5'

HIRIP3 HMGB3 BCL11A CLSPN DEK

7.83e-0619961599778178e3ec121802db938db8c5475d19b43fec
ToppCellFetal_brain-fetalBrain_Zhong_nature-GW10|fetalBrain_Zhong_nature / Sample Type, Dataset, Time_group, and Cell type.

BCL11B NEUROD1 HMGB3 CLSPN NEUROD6

7.83e-061996158e72efcd421639ac36ed036ee13f13de070d361f
ToppCellFetal_brain-organoid_Tanaka_cellReport-GW10|organoid_Tanaka_cellReport / Sample Type, Dataset, Time_group, and Cell type.

BCL11B NEUROD1 HMGB3 CLSPN NEUROD6

8.02e-062006157c495030e6566b81d97b5516d1972e335ce5ed8c
ToppCellBronchial-NucSeq-Stromal|NucSeq / Cell types per location group and 10X technology with lineage, and cell group designations

PKNOX2 VGLL3 PIEZO2 TSHZ2 PODN

8.02e-06200615389cc775c8419d90fb77cd794376d2160a7bf44e
ToppCellParenchymal-NucSeq-Stromal|NucSeq / Cell types per location group and 10X technology with lineage, and cell group designations

PKNOX2 VGLL3 PIEZO2 TSHZ2 PODN

8.02e-06200615cf433f9b43d7db07acaf70e060f8f77c974e72f3
ToppCellBronchial-NucSeq-Stromal-Fibroblastic|NucSeq / Cell types per location group and 10X technology with lineage, and cell group designations

PKNOX2 VGLL3 PIEZO2 TSHZ2 PODN

8.02e-06200615cae972324d1dfea6efeaf6013f265c7c6bb48db4
ToppCellParenchymal-NucSeq-Stromal-Fibroblastic|NucSeq / Cell types per location group and 10X technology with lineage, and cell group designations

PKNOX2 VGLL3 PIEZO2 TSHZ2 PODN

8.02e-06200615311fab076f2ceb258e3970eb21e39344b894042a
ToppCellBrain_organoid-organoid_Tanaka_cellReport-2m-Neuronal-Neuron|2m / Sample Type, Dataset, Time_group, and Cell type.

BCL11B NEUROD1 HMGB3 KAT6B NEUROD6

8.02e-06200615a581f1704a87b0390e1e2ff85053367d85247755
ToppCellCerebellum-Endothelial-MURAL-M1(Rgs5Acta2)-M1_3|Cerebellum / BrainAtlas - Mouse McCarroll V32

VGLL3 PIEZO2 HRC CFAP43

3.44e-051346148a3acf32cabc37b49d6488d43cdaae7cec79d119
ToppCellCerebellum-Endothelial-MURAL-M1(Rgs5Acta2)-M1_3-MURAL_Mural.Acta2Rgs5.Rgs5_(Mural.Acta2Rgs5.Rgs5)|Cerebellum / BrainAtlas - Mouse McCarroll V32

VGLL3 PIEZO2 HRC CFAP43

3.44e-051346141fa13185a4dfb4563473184c0c4f449011d88631
ToppCellCerebellum-Endothelial-MURAL-M1(Rgs5Acta2)-M1_3-MURAL_Mural.Acta2Rgs5.Rgs5_(Mural.Acta2Rgs5.Rgs5)-|Cerebellum / BrainAtlas - Mouse McCarroll V32

VGLL3 PIEZO2 HRC CFAP43

3.44e-051346141ab99a22d0d7657f62f8ea7d96bb24e88de54fd4
ToppCellPosterior_cortex-Neuronal-Excitatory-eN1(Slc17a7)-eN1_1|Posterior_cortex / BrainAtlas - Mouse McCarroll V32

NEUROD1 CFAP44 RYR1 CFAP65

4.44e-051436145fb5a4ea93e5cce55d427e3b4a50a979504fad3c
ToppCellPosterior_cortex-Neuronal-Excitatory-eN1(Slc17a7)-eN1_1-Bcl6|Posterior_cortex / BrainAtlas - Mouse McCarroll V32

VGLL3 BCL11B RYR1 CFAP65

4.56e-0514461408005be9e3367f78ef27e125d9cce5ca53f4bd2d
ToppCellfrontal_cortex-Neuronal-glutamatergic_neuron-NP-L5_NP_ALM_Trhr_Nefl|frontal_cortex / Per Region, Lineage, Cell class, Cell type, Cell subtype

BCL11B TSHZ2 ARID3C NEUROD6

5.21e-05149614558a441804dbcd5b5f39a3b1933b48976711ff15
ToppCellfrontal_cortex-Neuronal-glutamatergic_neuron-NP|frontal_cortex / Per Region, Lineage, Cell class, Cell type, Cell subtype

BCL11B TSHZ2 ARID3C NEUROD6

5.34e-051506142ba55e51877e2e749cccdae7df5d885dc55b2587
ToppCellPND28-Immune-Immune_Lymphocytic_T/NK-Lymphocytic_T-CD4_T-CD4_T_prolif|PND28 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif

BCL11B ATRX PEX14 CLSPN

5.77e-051536145ac4b97d35c1029a5fc625239f92e35136c4d832
ToppCellLPS_only-Epithelial_airway-Ciliated_cells-Ciliated|LPS_only / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2

CFAP43 CFAP44 CCDC180 CFAP65

5.92e-051546149ca71d440c4f87781e6525b8141e7d8d470b6a8e
ToppCellLPS_only-Epithelial_airway-Ciliated_cells|LPS_only / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2

CFAP43 CFAP44 CCDC180 CFAP65

5.92e-0515461458072ce422d09f2de602580325eaac6c4ec6c136
ToppCellLPS-IL1RA+antiTNF-Epithelial_airway-Ciliated_cells|LPS-IL1RA+antiTNF / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2

CFAP43 CFAP44 CCDC180 CFAP65

6.07e-051556145f1e2195a6b831e1b636f5cc3a282ca423721822
ToppCellLPS-IL1RA+antiTNF-Epithelial_airway-Ciliated_cells-Ciliated|LPS-IL1RA+antiTNF / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2

CFAP43 CFAP44 CCDC180 CFAP65

6.07e-051556140944429459f642a1bcc56edc1ec28aaecde3e2dc
ToppCellfacs-Brain_Non-Myeloid-Striatum-24m|Brain_Non-Myeloid / Brain_Non-Myeloid_Brain_Myeloid - method, tissue, subtissue, age, lineage, cell ontology and free annotation

BCL11B CCDC180 RYR1 CFAP65

6.70e-0515961400a157d033627d0e65c3fbd38d652c4cf56b47f6
ToppCellfacs-Brain_Non-Myeloid-Cerebellum_-18m-Neuronal-SPN_Neuron_STR|Brain_Non-Myeloid / Brain_Non-Myeloid_Brain_Myeloid - method, tissue, subtissue, age, lineage, cell ontology and free annotation

BCL11B HAP1 BCL11A RYR1

7.73e-051656141b7dfa173e83aa8c46a3153a3261866c065c3b73
ToppCellfacs-Brain_Non-Myeloid-Cerebellum_-18m-Neuronal-medium_spiny_neuron|Brain_Non-Myeloid / Brain_Non-Myeloid_Brain_Myeloid - method, tissue, subtissue, age, lineage, cell ontology and free annotation

BCL11B HAP1 BCL11A RYR1

7.73e-05165614b4f7d33af7d053ec07b01bd67d861600a9c4822e
ToppCelllung-Ciliated_Epithelia|lung / shred on tissue and cell subclass

AK9 CFAP43 CFAP44 CCDC180

8.10e-0516761426cf1cfa58ee74794449a87eb19cd896e1ec8892
ToppCellE16.5-Epithelial-Epithelial_Airway-Ciliated/Deuterosomal-Ciliated-Ciliated_mature|E16.5 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif

AK9 CFAP43 CCDC180 CFAP65

8.29e-05168614fa7c0303918cea04e3f4c4f3cb079be19004d214
ToppCelldroplet-Lung-1m-Hematologic-myeloid-myeloid_dendritic_cell|1m / method, tissue, age, lineage, sublineage, cell ontologies, cell type and subtype

ZMYND15 BCL11A ITGAE RYR1

8.29e-0516861499148986aa5628f67d85258c171b254be77a071c
ToppCellE16.5-Epithelial-Epithelial_Airway-Ciliated/Deuterosomal-Ciliated|E16.5 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif

AK9 CFAP43 CCDC180 CFAP65

8.29e-051686147edcab103c69e928d5c19a0d218ffb3ae32f9e70
ToppCellPND10-Immune-Immune_Lymphocytic_T/NK-Lymphocytic_ILC-NK-ILC-ILC_prolif|PND10 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif

BCL11B CLSPN ITGAE DEK

8.48e-0516961420fbf78382fb0ba9a63ab1aa0abc615476994ac5
ToppCell3'-Broncho-tracheal-Epithelial-Airway_ciliated-ciliated_columnar_cell_of_tracheobronchial_tree-Multiciliated_(non-nasal)-Multiciliated_(non-nasal)_L.0.3.0.2|3' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5

AK9 CFAP43 CFAP44 CFAP65

8.48e-0516961414aadc2d1bf66eb47dac33b4d61ddb3c942caa4f
ToppCellfacs-Large_Intestine-Distal-18m-Epithelial-epithelial_cell_of_large_intestine|Large_Intestine / Large_Intestine_Pancreas_Liver - method, tissue, subtissue, age, lineage, cell ontology and free annotation

HIRIP3 ATRX NCL CLSPN

9.29e-05173614a5172dee859bf6c2eed46c48bd64dfef0ff9f28f
ToppCellfacs-Large_Intestine-Distal-18m-Epithelial-Lgr5-_amplifying_undifferentiated_cell|Large_Intestine / Large_Intestine_Pancreas_Liver - method, tissue, subtissue, age, lineage, cell ontology and free annotation

HIRIP3 ATRX NCL CLSPN

9.29e-05173614639b5b0b33ce5aa0bc26363c059717012ddc14c0
ToppCellfacs-Brain_Non-Myeloid-Cerebellum_-18m-Epithelial-neuronal_stem_cell|Brain_Non-Myeloid / Brain_Non-Myeloid_Brain_Myeloid - method, tissue, subtissue, age, lineage, cell ontology and free annotation

PIEZO2 HMGB3 BCL11A IGSF3

9.29e-05173614f38bf7584e08d15a6e2c116b7c3551ba475a5e14
ToppCellPND14-Immune-Immune_Myeloid-DC-cDC1-cDC1_prolif|PND14 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif

ZNF777 HIRIP3 CLSPN ITGAE

9.50e-0517461409b091e24317c3f7bac043f04762a533e30793de
ToppCellPND28-Immune-Immune_Myeloid-DC|PND28 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif

ZMYND15 ITGAE DEK RYR1

9.50e-05174614cfb4947caf7b1a856df246023fc6e5bfcc97ad36
ToppCellPND07-Endothelial-Endothelial_blood-vessel-Microvascular_EC-EPC-EPC_prolif|PND07 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif

HIRIP3 HAP1 CLSPN DEK

9.50e-0517461466555c610251ea04f968c258e312d720c18e7cde
ToppCelldroplet-Heart-HEART_(ALL_4:4:4:1:1)-30m-Hematologic-nan|Heart / Tongue_Heart_Limb_Muscle_Aorta_Diaphragm - method, tissue, subtissue, age, lineage, cell ontology and free annotation

ZNF777 BCL11A CLSPN RYR1

9.71e-051756143bca1aac2a2a1f46753b5f9462888f144ed8327b
ToppCellfacs-Trachea-nan-18m-Epithelial-ciliated_columnar_cell_of_tracheobronchial_tree|Trachea / Lung_Trachea - method, tissue, subtissue, age, lineage, cell ontology and free annotation

CFAP43 CFAP44 CCDC180 CFAP65

9.92e-05176614ed788a5969edfd1199828ca5b0dd34e7f29c4d30
ToppCell3'-Broncho-tracheal-Epithelial-Epithelial_transtional-secretory-nasal_mucosa_goblet_cell-Goblet_(nasal)-Goblet_(nasal)_L.0.2.2.1|3' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5

AK9 CFAP43 CFAP44 CFAP65

9.92e-05176614dee780cfa85234a7cd7bf440b66b84cec959893e
ToppCellPBMC-Convalescent-Lymphocyte-B-B_cell-B_naive-B_naive-11|Convalescent / Location, Disease Group, Cell group, Cell class and sub_cluster (2021.03.01)

AMER1 GPATCH11 BCL11A CFAP44

1.01e-041776143535575686c9700ab72700aae6f2070ebbb50044
ToppCellPND28-Immune-Immune_Myeloid-DC-cDC1-cDC1_prolif|PND28 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif

CLSPN ITGAE DEK RYR1

1.06e-041796149dea57494d59abd6e8abf34e31faf53462ea0fa0
ToppCellfacs-Trachea-18m-Epithelial-airway_epithelial-tracheobronchial_ciliated_cell-ciliated_cell|18m / method, tissue, age, lineage, sublineage, cell ontologies, cell type and subtype

CFAP43 CFAP44 CCDC180 CFAP65

1.06e-04179614d4efbc34f52136039b96451fd0b0a0ad164197c6
ToppCellfacs-Trachea-18m-Epithelial-airway_epithelial-tracheobronchial_ciliated_cell|18m / method, tissue, age, lineage, sublineage, cell ontologies, cell type and subtype

CFAP43 CFAP44 CCDC180 CFAP65

1.06e-041796148a66d197a2f55d763ff7ef0bec89ee96f59c3937
ToppCell3'-Parenchyma_lung-Epithelial-Airway_ciliated-ciliated_columnar_cell_of_tracheobronchial_tree-Multiciliated_(non-nasal)-Multiciliated_(non-nasal)_L.0.3.3.0|3' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5

NEUROD1 CFAP43 CFAP44 CCDC180

1.08e-0418061492fb01b91261b3103454924cde56add337b41844
ToppCellPND10-Immune-Immune_Lymphocytic_T/NK-Lymphocytic_B-B-B_prolif|PND10 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif

NCL BCL11A CLSPN DEK

1.15e-04183614956ff95aef9c5521b6a3ba7ac6df0aad242c1c35
ToppCellTCGA-Lung-Primary_Tumor-Lung_Carcinoma-Lung_Squamous_Cell_Carcinoma-3|TCGA-Lung / Sample_Type by Project: Shred V9

AMER1 HAP1 BCL11A IGSF3

1.18e-04184614ea4ccebe2d54279fcc517e4f0bfa652b91a808bb
ToppCellBrain_organoid-organoid_Kanton_Nature|Brain_organoid / Sample Type, Dataset, Time_group, and Cell type.

BBX TSHZ2 HMGB3 DEK

1.20e-04185614857c7ca8493e91ef1d0078ddafd6082020f9b169
ToppCellfacs-Brain_Non-Myeloid-Cerebellum-24m-Epithelial-neuroepithelial_cell|Brain_Non-Myeloid / Brain_Non-Myeloid_Brain_Myeloid - method, tissue, subtissue, age, lineage, cell ontology and free annotation

CFAP43 CFAP44 CCDC180 CFAP65

1.20e-0418561405bc89a566b0db90ae06506e067190a4739a0974
ToppCellNS-moderate-d_16-33-Epithelial-Ciliated|d_16-33 / Location, Severity, dps_group, Lineage and Cell class of Upper airway (combined)

CFAP43 CFAP44 CCDC180 CFAP65

1.20e-041856145e689c2fb36ce3ac2adc8d15f67107f21cf68868
ToppCellNS-critical-d_16-33-Epithelial-Ciliated|d_16-33 / Location, Severity, dps_group, Lineage and Cell class of Upper airway (combined)

CFAP43 CFAP44 CCDC180 CFAP65

1.23e-0418661476033438426d8f9c72cd6691a7baf92104c9f03d
ToppCellPND14-Epithelial-Epithelial_Airway|PND14 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif

AK9 CFAP43 CFAP44 CFAP65

1.25e-041876141399c703505211c510b3f14c7a2aa9930566c473
ToppCellfacs-Lung-EPCAM-3m-Epithelial-Ciliated_cell|Lung / Lung_Trachea - method, tissue, subtissue, age, lineage, cell ontology and free annotation

CFAP43 CFAP44 CCDC180 CFAP65

1.25e-0418761404dba2ed09ee4180830bdf0191921696697ea234
ToppCellfacs-Lung-EPCAM-3m-Epithelial-ciliated_columnar_cell_of_tracheobronchial_tree|Lung / Lung_Trachea - method, tissue, subtissue, age, lineage, cell ontology and free annotation

CFAP43 CFAP44 CCDC180 CFAP65

1.25e-04187614805dafe22f835ece4dd091d8030d0a63b52a48dd
ToppCellCiliated|World / Class top

CFAP43 CFAP44 CCDC180 CFAP65

1.28e-04188614cc9178361360b5800f96516ed6a65089c144b1ce
ToppCellHSPCs-Ery/Mk_prog.|World / Lineage and Cell class

HMGB3 NCL BCL11A DNTTIP2

1.28e-041886145390089213cd6ee90dcdfd3c3f5b6765376cccf2
ToppCell3'_v3-bone_marrow-Lymphocytic_B_plasma-Plasmablasts|bone_marrow / Manually curated celltypes from each tissue

PDIA4 CALR HMGB3 CLSPN

1.28e-041886144caae2acd9ec0eb79b7476a1e59f30f39afddcda
ToppCell10x_3'_v2v3-Neoplastic-Stem-like-OPC-like-OPC-like-D|10x_3'_v2v3 / Platform, Oncotype, Lineage, Cell_class, celltype (level4), mutation group

PODN HMGB3 PODXL2 BCAN

1.28e-041886144e1b9880b61c0a21beda6ce5e2c3523fd6adb51c
ToppCellPND07-Epithelial-Epithelial_Airway-Ciliated/Deuterosomal-Ciliated-Ciliated_mature|PND07 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif

AK9 CFAP43 CFAP44 CFAP65

1.31e-04189614057d7a03fdbe779122b203619a6f947f49b84d28
ToppCellfacs-Lung-24m-Epithelial-airway_epithelial-lung_ciliated_cell|24m / method, tissue, age, lineage, sublineage, cell ontologies, cell type and subtype

CFAP43 CFAP44 CCDC180 CFAP65

1.31e-041896141c28ad1263891d963e483b6847d8e89cc1b2d07e
ToppCellfacs-Lung-24m-Epithelial-airway_epithelial-lung_ciliated_cell-ciliated_cell|24m / method, tissue, age, lineage, sublineage, cell ontologies, cell type and subtype

CFAP43 CFAP44 CCDC180 CFAP65

1.31e-0418961400b20c2ed7876486c8e42e3a5b13023f44987a34
ToppCelldroplet-Marrow-BM_(NON-STC)-30m-Hematologic-nan|Marrow / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation

HMGB3 CLSPN DEK NACAD

1.31e-0418961416dfc37d8d390ed7f927bc844c47c9c5a89a0928
ToppCellFetal_brain-organoid_Tanaka_cellReport-GW09-Neuronal-Neuron|GW09 / Sample Type, Dataset, Time_group, and Cell type.

PDIA4 NEUROD1 TSHZ2 NEUROD6

1.31e-041896143717d1148e26ac78a26aea0ca1dbfbb9d3668877
ToppCelldroplet-Marrow-BM_(NON-STC)-30m-Hematologic|Marrow / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation

HMGB3 CLSPN DEK NACAD

1.31e-041896143ade3fa9369e85304b20d7233b581f18ad5ecc89
Diseaseattention deficit hyperactivity disorder

TSHZ2 NCL BCL11A CFAP43 ITGAE

6.57e-04354585EFO_0003888
Diseasetestosterone measurement

PKNOX2 VGLL3 BCL11B AMER1 BBX SLC4A1AP TSHZ2 FGD1 ARID3C

8.06e-041275589EFO_0004908
Diseaseexecutive function measurement

BCL11B PIEZO2 CUL9 BCL11A RYR1

8.61e-04376585EFO_0009332
DiseaseMental Retardation, X-Linked

ATRX FGD1

1.49e-0329582C1136249
DiseaseIntellectual Disability

BCL11B SUPT16H ACIN1 HMGB3 BCL11A

1.85e-03447585C3714756

Protein segments in the cluster

PeptideGeneStartEntry
NLKTEEEEEEEEEEE

ACIN1

266

Q9UKV3
EEEEEEEEEEEEKSE

EP400

426

Q96L91
EEDDEEEEEEDKTVK

CFAP43

956

Q8NDM7
EEEEEEDEEEDIDKV

BBX

41

Q8WY36
EEEEDAEEDEEKREE

ARID3C

51

A6NKF2
EEVELEEEEEEVKEE

AMER1

386

Q5JTC6
DEKEEEEEEEKLEEE

CCDC180

771

Q9P1Z9
EFQEEEEEKEEEEEE

CFAP44

721

Q96MT7
QRRREEEEDEEEEED

FAM193A

901

P78312
EEEDEEEEEDRFKEE

FAM193A

906

P78312
SEEEEEEEEKEEEEE

ATP1B4

51

Q9UN42
EEEEKEEEEEEEKEE

ATP1B4

56

Q9UN42
DLIKPEEEEEEEEEE

KAT6B

1346

Q8WYB5
EEKYEDEEEKEEEEE

BCAN

456

Q96GW7
DEEEKEEEEEEEEVE

BCAN

461

Q96GW7
REEEEEEEEEEEREK

PODXL2

161

Q9NZ53
EEEEEEEREKEEVEK

PODXL2

166

Q9NZ53
EEREKEEVEKQEEEE

PODXL2

171

Q9NZ53
GKEKEEEEEEEEEEE

PODN

596

Q7Z5L7
KEQREEEVEEEEKEE

HIRIP3

236

Q9BW71
EEEKEEREEEEEETQ

GLIPR1L2

321

Q4G1C9
EEEEDEEDEEERKPQ

GRWD1

126

Q9BQ67
EKGEEEEEELEEEEE

CFAP65

1766

Q6ZU64
EEEEEEEEELTESER

BCL11A

496

Q9H165
EKEEEEDKEEEEDEE

ITGAE

181

P38570
LDREEEEDEEEEEEE

GOLGA2

701

Q08379
DEEEEEEEEEEPVKE

NCL

261

P19338
DEEEEEKEEEEEKEE

FAM9A

221

Q8IZU1
EKEEEEEKEEEEEEG

FAM9A

226

Q8IZU1
KKEQESDEEEEEEEE

BOD1L1

2981

Q8NFC6
NSEEEEEEKEEEEEE

ATRX

1441

P46100
LEEQEEEREEEEEED

IGSF3

1006

O75054
LEEETEEDEEEKEQD

GPATCH11

216

Q8N954
EEEDEEEEEEEEELL

BCL11B

531

Q9C0K0
EDEDDEEEEEEEKEK

DEK

36

P35659
EEEEEEEKEAEEEQE

HAP1

266

P54257
EEKEAEEEQEEEEAE

HAP1

271

P54257
EEEEEEEEEEERKGL

IL27

166

Q8NEV9
KDEDEEDEEDKEEDE

CALR

391

P27797
ARKKVEEEDEEEEEE

HMGB3

176

O15347
EQEDEEEKRLEEEEE

CUL9

1661

Q8IWT3
EEKRLEEEEEEEEEE

CUL9

1666

Q8IWT3
EEEEEEEEEEEAEKE

CUL9

1671

Q8IWT3
EEDEEEKEEDEEETA

RYR1

1886

P21817
EEEEEEELEEEVDEL

PKNOX2

441

Q96KN3
DEELEEEEELEEEEE

PCGF6

81

Q9BYE7
DEEDQEEERELEEEI

NOC3L

176

Q8WTT2
KGEEEEEEEEQEEEE

AK9

196

Q5TCS8
DEEKEEEEEKEEEEE

POLR3GL

166

Q9BT43
EDEEDEEEEDELKDE

NBR1

706

Q14596
EEDDEEEEEEKDREI

FGD1

341

P98174
EEDDDEEEDDLEVKE

PDIA4

46

P13667
EEEEEEEDEERREER

HRC

541

P23327
EEEKREDKEDEEDEE

PEX14

316

O75381
DEEEEEEEKDEAEDL

SUPT16H

436

Q9Y5B9
EEELEEEEEKEEEEE

CLSPN

656

Q9HAW4
ELSRIEEEKEDEEEE

CNGB1

346

Q14028
IEEEKEEEEDEKSEE

DNTTIP2

516

Q5QJE6
DLKEEEEEEEEVEDE

SHFL

271

Q9NUL5
REKEEEVEEEEEKVE

USP35

706

Q9P2H5
KREEEEEEKEEFEEE

PIEZO2

461

Q9H5I5
LKEEEEIKEEEEEED

TSHZ2

21

Q9NRE2
SKQEEEDEEEEEEEK

VGLL3

61

A8MV65
IKTEEQDEEEEEEEE

ZNF777

451

Q9ULD5
EEEEEREEEEEREEE

WDR87

2246

Q6ZQQ6
REEEEEREEEEVREE

WDR87

2251

Q6ZQQ6
EREEEEVREEEEERK

WDR87

2256

Q6ZQQ6
EEEEEEDEEEEKRED

ZMYND15

116

Q9H091
ECKEEEEEEEEEVDE

NACAD

1506

O15069
EVEEEEEEEEEEEKE

SLC4A1AP

646

Q9BWU0
EEEEEEEEKEKEEHE

SLC4A1AP

651

Q9BWU0
LEEEEEEEEEDDDQK

NEUROD1

66

Q13562
TEKEEEEEDREEEDE

NEUROD6

56

Q96NK8