Cluster composition

Functions

Category	Name	IntersectionWithQuery	PValue	GenesInTerm	GenesInQuery	GenesInTermInQuery	ID
GeneOntologyMolecularFunction	extracellular matrix structural constituent conferring tensile strength	COL4A1 COL4A3 COL5A1 COL6A2 COL27A1	1.99e-07	46	57	5	GO:0030020
GeneOntologyMolecularFunction	cell adhesion molecule binding	PDIA4 COL4A3 COL5A1 FLNA USP8 EPS15L1 AHNAK EVPL PHLDB2	4.61e-05	599	57	9	GO:0050839
GeneOntologyMolecularFunction	SMAD binding	FLNA SKOR2 PRDM16 DDX5	1.06e-04	86	57	4	GO:0046332
GeneOntologyMolecularFunction	extracellular matrix structural constituent	COL4A1 COL4A3 COL5A1 COL6A2 COL27A1	1.98e-04	188	57	5	GO:0005201
GeneOntologyMolecularFunction	primary miRNA binding	SRF DDX5	3.55e-04	10	57	2	GO:0070878
GeneOntologyMolecularFunction	cadherin binding	FLNA USP8 EPS15L1 AHNAK EVPL PHLDB2	4.01e-04	339	57	6	GO:0045296
GeneOntologyMolecularFunction	platelet-derived growth factor binding	COL4A1 COL5A1	5.19e-04	12	57	2	GO:0048407
GeneOntologyMolecularFunction	structural molecule activity	COL4A1 COL4A3 COL5A1 COL6A2 AHNAK COL27A1 PCLO H2AX EVPL	8.82e-04	891	57	9	GO:0005198
GeneOntologyBiologicalProcess	morphogenesis of an epithelial sheet	COL5A1 FLNA SRF PHLDB2	4.87e-05	74	56	4	GO:0002011
GeneOntologyBiologicalProcess	negative regulation of DNA-templated transcription	ZNF512B FLNA MSC FEZF2 RBM10 SKOR2 SRF CDYL2 TWIST2 CC2D1B ZNF318 PRDM16 DDX5	7.36e-05	1399	56	13	GO:0045892
GeneOntologyBiologicalProcess	negative regulation of RNA biosynthetic process	ZNF512B FLNA MSC FEZF2 RBM10 SKOR2 SRF CDYL2 TWIST2 CC2D1B ZNF318 PRDM16 DDX5	8.15e-05	1413	56	13	GO:1902679
GeneOntologyCellularComponent	complex of collagen trimers	COL4A1 COL4A3 COL5A1 COL27A1	2.87e-07	21	57	4	GO:0098644
GeneOntologyCellularComponent	collagen trimer	COL4A1 COL4A3 COL5A1 COL6A2 COL27A1	4.15e-06	88	57	5	GO:0005581
GeneOntologyCellularComponent	endoplasmic reticulum lumen	PDIA4 COL4A1 COL4A3 COL5A1 COL6A2 SCG3 COL27A1	3.20e-05	332	57	7	GO:0005788
GeneOntologyCellularComponent	supramolecular polymer	COL4A1 COL4A3 COL5A1 FLNA MTMR12 INPP5D AHNAK COL27A1 PAFAH1B1 NAV3 EVPL KIFC1	6.97e-05	1187	57	12	GO:0099081
GeneOntologyCellularComponent	collagen type IV trimer	COL4A1 COL4A3	1.09e-04	6	57	2	GO:0005587
GeneOntologyCellularComponent	basement membrane collagen trimer	COL4A1 COL4A3	2.02e-04	8	57	2	GO:0098651
GeneOntologyCellularComponent	network-forming collagen trimer	COL4A1 COL4A3	2.02e-04	8	57	2	GO:0098642
GeneOntologyCellularComponent	collagen network	COL4A1 COL4A3	2.02e-04	8	57	2	GO:0098645
GeneOntologyCellularComponent	fibrillar collagen trimer	COL5A1 COL27A1	4.74e-04	12	57	2	GO:0005583
GeneOntologyCellularComponent	banded collagen fibril	COL5A1 COL27A1	4.74e-04	12	57	2	GO:0098643
GeneOntologyCellularComponent	cell cortex	FLNA INPP5D PCLO PAFAH1B1 NCL PHLDB2	5.08e-04	371	57	6	GO:0005938
GeneOntologyCellularComponent	supramolecular fiber	COL5A1 FLNA MTMR12 INPP5D AHNAK COL27A1 PAFAH1B1 NAV3 EVPL KIFC1	1.20e-03	1179	57	10	GO:0099512
MousePheno	irregularly shaped pupil	COL4A1 COL4A3 FLNA EPS15L1	1.09e-05	39	50	4	MP:0001319
Domain	Collagen	COL4A1 COL4A3 COL5A1 COL6A2 COL27A1	6.03e-06	85	57	5	IPR008160
Domain	Collagen	COL4A1 COL4A3 COL5A1 COL6A2 COL27A1	6.03e-06	85	57	5	PF01391
Domain	C4	COL4A1 COL4A3	1.36e-04	6	57	2	SM00111
Domain	-	COL4A1 COL4A3	1.36e-04	6	57	2	2.170.240.10
Domain	Collagen_VI_NC	COL4A1 COL4A3	1.36e-04	6	57	2	IPR001442
Domain	C4	COL4A1 COL4A3	1.36e-04	6	57	2	PF01413
Domain	NC1_IV	COL4A1 COL4A3	1.36e-04	6	57	2	PS51403
Domain	Fib_collagen_C	COL5A1 COL27A1	4.94e-04	11	57	2	IPR000885
Domain	COLFI	COL5A1 COL27A1	4.94e-04	11	57	2	PF01410
Domain	NC1_FIB	COL5A1 COL27A1	4.94e-04	11	57	2	PS51461
Domain	Fib_collagen_C	COL5A1 COL27A1	4.94e-04	11	57	2	PD002078
Domain	COLFI	COL5A1 COL27A1	4.94e-04	11	57	2	SM00038
Domain	CH	FLNA SPEF2 NAV3	1.44e-03	73	57	3	PS50021
Domain	CH-domain	FLNA SPEF2 NAV3	1.56e-03	75	57	3	IPR001715
Domain	TSPN	COL5A1 COL27A1	2.22e-03	23	57	2	SM00210
Domain	LisH	TCOF1 PAFAH1B1	3.29e-03	28	57	2	SM00667
Domain	LisH	TCOF1 PAFAH1B1	3.29e-03	28	57	2	IPR006594
Domain	LISH	TCOF1 PAFAH1B1	3.29e-03	28	57	2	PS50896
Domain	CTDL_fold	COL4A1 COL4A3 SUSD5	4.27e-03	107	57	3	IPR016187
Domain	LAM_G_DOMAIN	COL5A1 COL27A1	6.00e-03	38	57	2	PS50025
Pathway	REACTOME_NCAM1_INTERACTIONS	COL4A1 COL4A3 COL5A1 COL6A2 CACNA1H	1.83e-07	42	44	5	M7169
Pathway	REACTOME_COLLAGEN_CHAIN_TRIMERIZATION	COL4A1 COL4A3 COL5A1 COL6A2 COL27A1	2.32e-07	44	44	5	M27812
Pathway	REACTOME_NCAM1_INTERACTIONS	COL4A1 COL4A3 COL5A1 COL6A2	3.86e-07	20	44	4	MM15061
Pathway	REACTOME_ASSEMBLY_OF_COLLAGEN_FIBRILS_AND_OTHER_MULTIMERIC_STRUCTURES	COL4A1 COL4A3 COL5A1 COL6A2 COL27A1	1.22e-06	61	44	5	M27103
Pathway	REACTOME_NCAM_SIGNALING_FOR_NEURITE_OUT_GROWTH	COL4A1 COL4A3 COL5A1 COL6A2 CACNA1H	1.44e-06	63	44	5	M11187
Pathway	REACTOME_COLLAGEN_BIOSYNTHESIS_AND_MODIFYING_ENZYMES	COL4A1 COL4A3 COL5A1 COL6A2 COL27A1	1.96e-06	67	44	5	M26999
Pathway	REACTOME_NCAM_SIGNALING_FOR_NEURITE_OUT_GROWTH	COL4A1 COL4A3 COL5A1 COL6A2	5.64e-06	38	44	4	MM14969
Pathway	REACTOME_COLLAGEN_CHAIN_TRIMERIZATION	COL4A1 COL4A3 COL5A1 COL6A2	7.68e-06	41	44	4	MM15538
Pathway	REACTOME_COLLAGEN_FORMATION	COL4A1 COL4A3 COL5A1 COL6A2 COL27A1	8.46e-06	90	44	5	M631
Pathway	PID_SYNDECAN_1_PATHWAY	COL4A1 COL4A3 COL5A1 COL6A2	1.22e-05	46	44	4	M198
Pathway	REACTOME_ASSEMBLY_OF_COLLAGEN_FIBRILS_AND_OTHER_MULTIMERIC_STRUCTURES	COL4A1 COL4A3 COL5A1 COL6A2	1.71e-05	50	44	4	MM14796
Pathway	REACTOME_COLLAGEN_DEGRADATION	COL4A1 COL4A3 COL5A1 COL6A2	2.16e-05	53	44	4	MM14566
Pathway	REACTOME_SIGNALING_BY_PDGF	COL4A1 COL4A3 COL5A1 COL6A2	2.89e-05	57	44	4	MM14713
Pathway	REACTOME_SIGNALING_BY_PDGF	COL4A1 COL4A3 COL5A1 COL6A2	3.10e-05	58	44	4	M2049
Pathway	REACTOME_COLLAGEN_BIOSYNTHESIS_AND_MODIFYING_ENZYMES	COL4A1 COL4A3 COL5A1 COL6A2	3.78e-05	61	44	4	MM14637
Pathway	REACTOME_COLLAGEN_DEGRADATION	COL4A1 COL4A3 COL5A1 COL6A2	4.58e-05	64	44	4	M26953
Pathway	PID_INTEGRIN1_PATHWAY	COL4A1 COL4A3 COL5A1 COL6A2	5.17e-05	66	44	4	M18
Pathway	PID_AVB3_INTEGRIN_PATHWAY	COL4A1 COL4A3 COL5A1 COL6A2	8.10e-05	74	44	4	M160
Pathway	REACTOME_ECM_PROTEOGLYCANS	COL4A1 COL4A3 COL5A1 COL6A2	8.99e-05	76	44	4	M27219
Pathway	REACTOME_COLLAGEN_FORMATION	COL4A1 COL4A3 COL5A1 COL6A2	8.99e-05	76	44	4	MM14573
Pathway	REACTOME_INTEGRIN_CELL_SURFACE_INTERACTIONS	COL4A1 COL4A3 COL5A1 COL6A2	8.99e-05	76	44	4	MM14867
Pathway	REACTOME_NON_INTEGRIN_MEMBRANE_ECM_INTERACTIONS	COL4A1 COL4A3 COL5A1	1.32e-04	32	44	3	MM14924
Pathway	REACTOME_INTEGRIN_CELL_SURFACE_INTERACTIONS	COL4A1 COL4A3 COL5A1 COL6A2	1.39e-04	85	44	4	M16441
Pathway	REACTOME_SIGNALING_BY_RECEPTOR_TYROSINE_KINASES	COL4A1 COL4A3 COL5A1 COL6A2 USP8 EPS15L1 COL27A1 SRF	2.08e-04	532	44	8	M27870
Pathway	REACTOME_SIGNALING_BY_RECEPTOR_TYROSINE_KINASES	COL4A1 COL4A3 COL5A1 COL6A2 USP8 EPS15L1 SRF	2.84e-04	418	44	7	MM15587
Pathway	WP_MIRNA_TARGETS_IN_ECM_AND_MEMBRANE_RECEPTORS	COL4A1 COL5A1 COL6A2	3.21e-04	43	44	3	M39565
Pathway	BIOCARTA_NPP1_PATHWAY	COL4A1 COL4A3	4.22e-04	10	44	2	M22040
Pathway	BIOCARTA_NPP1_PATHWAY	COL4A1 COL4A3	4.22e-04	10	44	2	MM1560
Pathway	REACTOME_DEGRADATION_OF_THE_EXTRACELLULAR_MATRIX	COL4A1 COL4A3 COL5A1 COL6A2	4.29e-04	114	44	4	MM14571
Pathway	WP_PHOSPHOINOSITIDES_METABOLISM	MTMR12 INPP5D PIP4K2C	4.73e-04	49	44	3	M40046
Pathway	BIOCARTA_VITCB_PATHWAY	COL4A1 COL4A3	5.14e-04	11	44	2	M15422
Pathway	BIOCARTA_VITCB_PATHWAY	COL4A1 COL4A3	6.16e-04	12	44	2	MM1526
Pathway	BIOCARTA_ACE2_PATHWAY	COL4A1 COL4A3	7.27e-04	13	44	2	MM1347
Pathway	BIOCARTA_ACE2_PATHWAY	COL4A1 COL4A3	7.27e-04	13	44	2	M12950
Pathway	REACTOME_NON_INTEGRIN_MEMBRANE_ECM_INTERACTIONS	COL4A1 COL4A3 COL5A1	8.16e-04	59	44	3	M27218
Pathway	BIOCARTA_PLATELETAPP_PATHWAY	COL4A1 COL4A3	8.46e-04	14	44	2	MM1458
Pathway	BIOCARTA_PLATELETAPP_PATHWAY	COL4A1 COL4A3	8.46e-04	14	44	2	M6487
Pathway	REACTOME_DEGRADATION_OF_THE_EXTRACELLULAR_MATRIX	COL4A1 COL4A3 COL5A1 COL6A2	9.30e-04	140	44	4	M587
Pathway	REACTOME_LAMININ_INTERACTIONS	COL4A1 COL4A3	9.74e-04	15	44	2	MM14922
Pathway	REACTOME_ANCHORING_FIBRIL_FORMATION	COL4A1 COL4A3	9.74e-04	15	44	2	M27161
Pathway	REACTOME_NERVOUS_SYSTEM_DEVELOPMENT	COL4A1 COL4A3 COL5A1 COL6A2 RAP1GAP	1.26e-03	261	44	5	MM15676
Pathway	REACTOME_CROSSLINKING_OF_COLLAGEN_FIBRILS	COL4A1 COL4A3	1.41e-03	18	44	2	M27164
Pathway	REACTOME_CROSSLINKING_OF_COLLAGEN_FIBRILS	COL4A1 COL4A3	1.41e-03	18	44	2	MM14882
Pathway	BIOCARTA_AMI_PATHWAY	COL4A1 COL4A3	1.75e-03	20	44	2	M15394
Pathway	REACTOME_PI_METABOLISM	MTMR12 INPP5D PIP4K2C	1.77e-03	77	44	3	MM14590
Pathway	REACTOME_SIGNALING_BY_MET	COL5A1 USP8 COL27A1	1.90e-03	79	44	3	M27643
Pathway	REACTOME_PI_METABOLISM	MTMR12 INPP5D PIP4K2C	2.27e-03	84	44	3	M676
Pathway	KEGG_ECM_RECEPTOR_INTERACTION	COL4A1 COL5A1 COL6A2	2.27e-03	84	44	3	M7098
Pathway	BIOCARTA_INTRINSIC_PATHWAY	COL4A1 COL4A3	2.31e-03	23	44	2	M15997
Pathway	BIOCARTA_INTRINSIC_PATHWAY	COL4A1 COL4A3	2.31e-03	23	44	2	MM1427
Pathway	REACTOME_EXTRACELLULAR_MATRIX_ORGANIZATION	COL4A1 COL4A3 COL5A1 COL6A2 COL27A1	2.32e-03	300	44	5	M610
Pathway	WP_FOCAL_ADHESION	COL4A1 COL5A1 FLNA COL6A2	2.69e-03	187	44	4	MM15913
Pathway	REACTOME_PHOSPHOLIPID_METABOLISM	MTMR12 INPP5D PIP4K2C LIPI	3.19e-03	196	44	4	MM14591
Pathway	KEGG_FOCAL_ADHESION	COL4A1 COL5A1 FLNA COL6A2	3.36e-03	199	44	4	M7253
Pathway	REACTOME_MET_ACTIVATES_PTK2_SIGNALING	COL5A1 COL27A1	3.92e-03	30	44	2	M27772
Pathway	REACTOME_LAMININ_INTERACTIONS	COL4A1 COL4A3	3.92e-03	30	44	2	M27216
Pathway	REACTOME_PHOSPHOLIPID_METABOLISM	MTMR12 INPP5D PIP4K2C LIPI	4.15e-03	211	44	4	M649
Pathway	REACTOME_DEVELOPMENTAL_BIOLOGY	COL4A1 COL4A3 COL5A1 COL6A2 RAP1GAP EVPL	4.43e-03	502	44	6	MM14537
Pubmed	In-Depth In Vivo Crosslinking in Minutes by a Compact, Membrane-Permeable, and Alkynyl-Enrichable Crosslinker.	PDIA4 FLNA USP8 BRD2 SCG3 AHNAK SPEF2 PCLO H2AX TWNK CC2D1B NCL ZNF318 ERICH6 DDX5	7.31e-09	1442	57	15	35575683
Pubmed	Identifying biological pathways that underlie primordial short stature using network analysis.	ZNF512B PDIA4 FLNA BRD2 TCOF1 RBM10 AHNAK NCL ZNF318 SNRPA1 DDX5 PHLDB2 KIFC1	8.54e-09	1024	57	13	24711643
Pubmed	The PHLPP1 N-Terminal Extension Is a Mitotic Cdk1 Substrate and Controls an Interactome Switch.	FLNA EPS15L1 TCOF1 RBM10 AHNAK ZNF318 SNRPA1 KIFC1	9.35e-09	256	57	8	33397691
Pubmed	Unbiased Identification of trans Regulators of ADAR and A-to-I RNA Editing.	FLNA TCOF1 RBM10 AHNAK NCL ZNF318 SNRPA1 DDX5	1.46e-08	271	57	8	32433965
Pubmed	Proteomic characterization of human multiple myeloma bone marrow extracellular matrix.	COL4A1 COL4A3 COL5A1 COL6A2 COL27A1	5.95e-08	62	57	5	28344315
Pubmed	Identification of proteins associated with ligand-activated estrogen receptor α in human breast cancer cell nuclei by tandem affinity purification and nano LC-MS/MS.	ZNF512B FLNA TCOF1 AHNAK H2AX NCL DDX5	1.55e-07	245	57	7	21182205
Pubmed	Transcriptional repressor ZBTB1 promotes chromatin remodeling and translesion DNA synthesis.	FLNA RBM10 TWNK NCL SNRPA1	2.30e-07	81	57	5	24657165
Pubmed	Spatiotemporal-resolved protein networks profiling with photoactivation dependent proximity labeling.	FSIP2 BRD2 TCOF1 RBM10 AHNAK PAFAH1B1 NCL ZNF318	2.83e-07	399	57	8	35987950
Pubmed	N-Terminal Acetyltransferase Naa40p Whereabouts Put into N-Terminal Proteoform Perspective.	ZNF512B FLNA USP8 EPS15L1 TCOF1 RBM10 AHNAK KIAA1217 NCL ZNF318 DDX5	2.95e-07	934	57	11	33916271
Pubmed	The Nse5/6-like SIMC1-SLF2 complex localizes SMC5/6 to viral replication centers.	ZNF512B FLNA EPS15L1 BRD2 RBM10 AHNAK NCL ZNF318 SNRPA1 DDX5 KIFC1	3.64e-07	954	57	11	36373674
Pubmed	Muscle progenitor cells failing to respond to positional cues adopt non-myogenic fates in myf-5 null mice.	COL4A1 COL4A3 TWIST2	9.09e-07	12	57	3	8918877
Pubmed	The membrane-spanning proteoglycan NG2 binds to collagens V and VI through the central nonglobular domain of its core protein.	COL5A1 COL6A2	2.64e-06	2	57	2	9099729
Pubmed	Binding of USP4 to cortactin enhances cell migration in HCT116 human colon cancer cells.	FLNA AHNAK EVPL SNRPA1 DDX5	3.13e-06	137	57	5	37039823
Pubmed	SETD1A Methyltransferase Is Physically and Functionally Linked to the DNA Damage Repair Protein RAD18.	BRD2 RBM10 AHNAK NCL PIP4K2C SNRPA1	3.55e-06	251	57	6	31076518
Pubmed	Defining the NSD2 interactome: PARP1 PARylation reduces NSD2 histone methyltransferase activity and impedes chromatin binding.	ZNF512B FLNA TCOF1 NCL	6.14e-06	72	57	4	31248990
Pubmed	The ubiquitin E3 ligase ARIH1 regulates hnRNP E1 protein stability, EMT and breast cancer progression.	FLNA AHNAK NCL DDX5	6.85e-06	74	57	4	35102251
Pubmed	Targeted and Interactome Proteomics Revealed the Role of PHD2 in Regulating BRD4 Proline Hydroxylation.	FLNA BRD2 TCOF1 RBM10 NCL PIP4K2C DDX5	7.69e-06	441	57	7	31239290
Pubmed	A domain-specific usherin/collagen IV interaction may be required for stable integration into the basement membrane superstructure.	COL4A3 COL5A1	7.91e-06	3	57	2	14676276
Pubmed	Human collagen genes encoding basement membrane alpha 1 (IV) and alpha 2 (IV) chains map to the distal long arm of chromosome 13.	COL4A1 COL4A3	7.91e-06	3	57	2	3025878
Pubmed	Identification of an Altered Matrix Signature in Kidney Aging and Disease.	COL4A1 COL4A3	7.91e-06	3	57	2	34049963
Pubmed	Collagen Family Genes Associated with Risk of Recurrence after Radiation Therapy for Vestibular Schwannoma and Pan-Cancer Analysis.	COL4A1 COL5A1	7.91e-06	3	57	2	34691289
Pubmed	Filamin A interacts with the coactivator MKL1 to promote the activity of the transcription factor SRF and cell migration.	FLNA SRF	7.91e-06	3	57	2	26554816
Pubmed	Chd1 protects genome integrity at promoters to sustain hypertranscription in embryonic stem cells.	H2AX NCL	7.91e-06	3	57	2	34381042
Pubmed	LL5beta directs the translocation of filamin A and SHIP2 to sites of phosphatidylinositol 3,4,5-triphosphate (PtdIns(3,4,5)P3) accumulation, and PtdIns(3,4,5)P3 localization is mutually modified by co-recruited SHIP2.	FLNA PHLDB2	7.91e-06	3	57	2	20236936
Pubmed	Flotillin-2 regulates epidermal growth factor receptor activation, degradation by Cbl-mediated ubiquitination, and cancer growth.	COL4A1 FLNA EPS15L1 MTMR12 DDX5	8.97e-06	170	57	5	36470425
Pubmed	Combinatorial targeting of a chromatin complex comprising Dot1L, menin and the tyrosine kinase BAZ1B reveals a new therapeutic vulnerability of endocrine therapy-resistant breast cancer.	ZNF512B COL5A1 TCOF1 RBM10 TWNK EVPL NCL SNRPA1 DDX5	9.12e-06	847	57	9	35850772
Pubmed	Deubiquitinase FAM/USP9X interacts with the E3 ubiquitin ligase SMURF1 protein and protects it from ligase activity-dependent self-degradation.	FLNA RBM10 NCL SNRPA1 DDX5	9.49e-06	172	57	5	23184937
Pubmed	Quantitative proteomic profiling of the extracellular matrix of pancreatic islets during the angiogenic switch and insulinoma progression.	COL4A1 COL4A3 COL5A1 COL6A2 COL27A1	1.03e-05	175	57	5	28071719
Pubmed	Functional proteomics establishes the interaction of SIRT7 with chromatin remodeling complexes and expands its role in regulation of RNA polymerase I transcription.	PDIA4 COL5A1 FLNA TCOF1 AHNAK H2AX NCL ZNF318	1.09e-05	653	57	8	22586326
Pubmed	Functional specialization of beta-arrestin interactions revealed by proteomic analysis.	FLNA TCOF1 RBM10 H2AX NCL DDX5	1.34e-05	317	57	6	17620599
Pubmed	Inhibition of calpain 1 restores plasma membrane stability to pharmacologically rescued Phe508del-CFTR variant.	FLNA RAP1GAP TCOF1 AHNAK NCL DDX5 PHLDB2	1.48e-05	488	57	7	31324722
Pubmed	Nature and the multiple functions of the 67-kD elastin-/laminin binding protein.	COL4A1 COL4A3	1.58e-05	4	57	2	7827955
Pubmed	BRUCE regulates DNA double-strand break response by promoting USP8 deubiquitination of BRIT1.	USP8 H2AX	1.58e-05	4	57	2	25733871
Pubmed	CHK2-BRCA1 tumor-suppressor axis restrains oncogenic Aurora-A kinase to ensure proper mitotic microtubule assembly.	PDIA4 FLNA TCOF1 AHNAK NCL DDX5 KIFC1	1.60e-05	494	57	7	26831064
Pubmed	D-2-hydroxyglutarate produced by mutant IDH1 perturbs collagen maturation and basement membrane function.	PDIA4 COL4A1 COL4A3	1.82e-05	31	57	3	22925884
Pubmed	PRP19 transforms into a sensor of RPA-ssDNA after DNA damage and drives ATR activation via a ubiquitin-mediated circuitry.	FLNA TCOF1 RBM10 AHNAK NCL DDX5	1.99e-05	340	57	6	24332808
Pubmed	Identification of Redox and Glucose-Dependent Txnip Protein Interactions.	FLNA EPS15L1 AHNAK	2.00e-05	32	57	3	27437069
Pubmed	Proteomic analysis of complexes formed by human topoisomerase I.	TCOF1 NCL SNRPA1	2.00e-05	32	57	3	15848144
Pubmed	A high-throughput approach for measuring temporal changes in the interactome.	PDIA4 FLNA USP8 EPS15L1 AHNAK PAFAH1B1 CC2D1B NCL ASPSCR1 SNRPA1 DDX5	2.07e-05	1455	57	11	22863883
Pubmed	LCP1 preferentially binds clasped αMβ2 integrin and attenuates leukocyte adhesion under flow.	PDIA4 FLNA USP8 H2AX NCL DDX5	2.13e-05	344	57	6	30333137
Pubmed	Folate receptor α increases chemotherapy resistance through stabilizing MDM2 in cooperation with PHB2 that is overcome by MORAb-202 in gastric cancer.	FLNA TCOF1 AHNAK NCL DDX5	2.26e-05	206	57	5	34185411
Pubmed	The intracellular interactome of tetraspanin-enriched microdomains reveals their function as sorting machineries toward exosomes.	FLNA TCOF1 NCL SNRPA1 DDX5	2.60e-05	212	57	5	23463506
Pubmed	In vitro interactions of oxidatively modified LDL with type I, II, III, IV, and V collagen, laminin, fibronectin, and poly-D-lysine.	COL4A1 COL4A3	2.63e-05	5	57	2	9409248
Pubmed	N-Terminomics for the Identification of In Vitro Substrates and Cleavage Site Specificity of the SARS-CoV-2 Main Protease.	FLNA EPS15L1 TCOF1 AHNAK KIAA1217 EVPL	2.74e-05	360	57	6	33111431
Pubmed	Endogenous human MDM2-C is highly expressed in human cancers and functions as a p53-independent growth activator.	NCL ZNF318 DDX5	2.87e-05	36	57	3	24147044
Pubmed	MYC multimers shield stalled replication forks from RNA polymerase.	FLNA BRD2 TCOF1 RBM10 AHNAK NCL SNRPA1 DDX5 KIFC1	3.10e-05	989	57	9	36424410
Pubmed	Large-scale characterization of HeLa cell nuclear phosphoproteins.	FLNA EPS15L1 BRD2 TCOF1 RBM10 NCL ZNF318 PHLDB2	3.66e-05	774	57	8	15302935
Pubmed	E-cadherin interactome complexity and robustness resolved by quantitative proteomics.	FLNA USP8 EPS15L1 AHNAK KIAA1217 EVPL PHLDB2	3.77e-05	565	57	7	25468996
Pubmed	Stimulation of extracellular matrix components in the normal brain by invading glioma cells.	COL4A1 COL4A3	3.94e-05	6	57	2	9506531
Pubmed	HIV-1 gp160 protein-macrophage interactions modulate mesangial cell proliferation and matrix synthesis.	COL4A1 COL4A3	3.94e-05	6	57	2	7495302
Pubmed	Extracellular matrix of the human optic nerve head.	COL4A1 COL4A3	3.94e-05	6	57	2	2426947
Pubmed	Angiogenesis and collagen type IV expression in different endothelial cell culture systems.	COL4A1 COL4A3	3.94e-05	6	57	2	23551189
Pubmed	Monoclonal antibody to human basement membrane collagen type IV.	COL4A1 COL4A3	3.94e-05	6	57	2	6811420
Pubmed	Immunolocalization of collagen types, laminin and fibronectin in the normal human pancreas.	COL4A1 COL4A3	3.94e-05	6	57	2	6389236
Pubmed	Collagen IV in the developing lens capsule.	COL4A1 COL4A3	3.94e-05	6	57	2	12225806
Pubmed	Insertional mutation of the collagen genes Col4a3 and Col4a4 in a mouse model of Alport syndrome.	COL4A1 COL4A3	3.94e-05	6	57	2	10534397
Pubmed	Abnormal basement membrane in the inner ear and the kidney of the Mpv17-/- mouse strain: ultrastructural and immunohistochemical investigations.	COL4A1 COL4A3	3.94e-05	6	57	2	16041630
Pubmed	A tumor derived motility factor that stimulates cell migration on extracellular matrix.	COL4A1 COL4A3	3.94e-05	6	57	2	9673377
Pubmed	Interaction of human thrombospondin with types I-V collagen: direct binding and electron microscopy.	COL4A1 COL5A1	3.94e-05	6	57	2	3571333
Pubmed	Localization of type IV collagen a 1 to a 6 chains in basement membrane during mouse molar germ development.	COL4A1 COL4A3	3.94e-05	6	57	2	11732842
Pubmed	Developmental distribution of collagen IV isoforms and relevance to ocular diseases.	COL4A1 COL4A3	3.94e-05	6	57	2	19275937
Pubmed	Distribution of basement membrane proteins in normal and fibrotic human liver: collagen type IV, laminin, and fibronectin.	COL4A1 COL4A3	3.94e-05	6	57	2	6988303
Pubmed	Mouse HFM1/Mer3 is required for crossover formation and complete synapsis of homologous chromosomes during meiosis.	H2AX HFM1	3.94e-05	6	57	2	23555294
Pubmed	A comprehensive proteomics-based interaction screen that links DYRK1A to RNF169 and to the DNA damage response.	AHNAK KIAA1217 H2AX EVPL	4.33e-05	118	57	4	30979931
Pubmed	The Activation-Induced Assembly of an RNA/Protein Interactome Centered on the Splicing Factor U2AF2 Regulates Gene Expression in Human CD4 T Cells.	AHNAK NCL SNRPA1 DDX5 KIFC1	4.60e-05	239	57	5	26641092
Pubmed	SARS-CoV-2 N Protein Antagonizes Stress Granule Assembly and IFN Production by Interacting with G3BPs to Facilitate Viral Replication.	AHNAK H2AX TWNK NCL DDX5	5.17e-05	245	57	5	35652658
Pubmed	Prediction of the coding sequences of mouse homologues of KIAA gene: II. The complete nucleotide sequences of 400 mouse KIAA-homologous cDNAs identified by screening of terminal sequences of cDNA clones randomly sampled from size-fractionated libraries.	USP8 MTMR12 RBM10 PLCL2 NAV3 CACNA1H	5.43e-05	407	57	6	12693553
Pubmed	Nidogen-1. Expression and ultrastructural localization during the onset of mesoderm formation in the early mouse embryo.	COL4A1 COL4A3	5.51e-05	7	57	2	10639489
Pubmed	Interstitial collagens I, III, and VI sequester and modulate the multifunctional cytokine oncostatin M.	COL4A1 COL4A3	5.51e-05	7	57	2	11711546
Pubmed	Myc promotes polyploidy in murine trophoblast cells and suppresses senescence.	H2AX NCL	5.51e-05	7	57	2	37278344
Pubmed	Regulation of protease nexin-1 target protease specificity by collagen type IV.	COL4A1 COL4A3	5.51e-05	7	57	2	8006028
Pubmed	Amotl2 interacts with LL5β, localizes to podosomes and regulates postsynaptic differentiation in muscle.	FLNA PHLDB2	5.51e-05	7	57	2	23525008
Pubmed	Corneal cell proteins and ocular surface pathology.	COL4A1 COL4A3	5.51e-05	7	57	2	10416788
Pubmed	Hypoplastic basement membrane of the lens anlage in the inheritable lens aplastic mouse (lap mouse).	COL4A1 COL4A3	5.51e-05	7	57	2	10716744
Pubmed	Purification, partial characterization of rat kidney hyaluronic acid binding protein and its localization on the cell surface.	COL4A1 COL4A3	5.51e-05	7	57	2	1724753
Pubmed	Nucleolin participates in DNA double-strand break-induced damage response through MDC1-dependent pathway.	H2AX NCL	5.51e-05	7	57	2	23145133
Pubmed	Type VI collagen anchors endothelial basement membranes by interacting with type IV collagen.	COL4A1 COL6A2	5.51e-05	7	57	2	9334230
Pubmed	A high endothelial venule secretory protein, mac25/angiomodulin, interacts with multiple high endothelial venule-associated molecules including chemokines.	COL4A1 COL5A1	5.51e-05	7	57	2	12847218
Pubmed	Complex patterns of expression suggest extensive roles for the alpha 2 beta 1 integrin in murine development.	COL4A1 COL4A3	5.51e-05	7	57	2	7521231
Pubmed	Distinct target-derived signals organize formation, maturation, and maintenance of motor nerve terminals.	COL4A1 COL4A3	5.51e-05	7	57	2	17418794
Pubmed	CHD3 and CHD4 form distinct NuRD complexes with different yet overlapping functionality.	ZNF512B BRD2 TCOF1 RBM10 NCL SNRPA1 DDX5	5.79e-05	605	57	7	28977666
Pubmed	Integrated Proteomics-Based Physical and Functional Mapping of AXL Kinase Signaling Pathways and Inhibitors Define Its Role in Cell Migration.	FLNA EPS15L1 AHNAK	6.03e-05	46	57	3	35022314
Pubmed	Upregulation of RIN3 induces endosomal dysfunction in Alzheimer's disease.	FLNA EPS15L1 TCOF1 RBM10 H2AX NCL	6.29e-05	418	57	6	32552912
Pubmed	Tissue-Specific Regulation of the Wnt/β-Catenin Pathway by PAGE4 Inhibition of Tankyrase.	FLNA TCOF1 RBM10 NCL DDX5	6.37e-05	256	57	5	32698014
Pubmed	A Global Analysis of the Receptor Tyrosine Kinase-Protein Phosphatase Interactome.	TCOF1 RBM10 KIAA1217 H2AX NCL DDX5	6.46e-05	420	57	6	28065597
Pubmed	Proteome-wide identification of HSP70/HSC70 chaperone clients in human cells.	PDIA4 FLNA EPS15L1 TCOF1 AHNAK PAFAH1B1 NCL SNRPA1 DDX5 PHLDB2	6.82e-05	1367	57	10	32687490
Pubmed	Circular RNA circPVT1 promotes nasopharyngeal carcinoma metastasis via the β-TrCP/c-Myc/SRSF1 positive feedback loop.	BRD2 TCOF1 NCL DDX5 PHLDB2	6.85e-05	260	57	5	36199071
Pubmed	Molecular Characterization of the Oncogene BTF3 and Its Targets in Colorectal Cancer.	FLNA TCOF1 AHNAK KIAA1217 TWNK NCL DDX5	7.17e-05	626	57	7	33644029
Pubmed	Characterization of the Extracellular Matrix of Normal and Diseased Tissues Using Proteomics.	COL4A1 COL4A3 COL5A1 COL6A2	7.31e-05	135	57	4	28675934
Pubmed	Appearance and persistence of fibronectin in cartilage. Specific interaction of fibronectin with collagen type II.	COL4A1 COL4A3	7.34e-05	8	57	2	3997552
Pubmed	Type IV collagen α6 chain is a regulator of keratin 10 in keratinization of oral mucosal epithelium.	COL4A1 COL4A3	7.34e-05	8	57	2	29422532
Pubmed	Mice develop normally without tenascin.	COL4A1 COL4A3	7.34e-05	8	57	2	1383086
Pubmed	Short amino acid sequences derived from C1q receptor (C1q-R) show homology with the alpha chains of fibronectin and vitronectin receptors and collagen type IV.	COL4A1 COL4A3	7.34e-05	8	57	2	1377218
Pubmed	Molecular properties of wild-type and mutant betaIG-H3 proteins.	COL4A1 COL4A3	7.34e-05	8	57	2	11867580
Pubmed	Transforming growth factor-beta and p-21: multiple molecular targets of decorin-mediated suppression of neoplastic growth.	COL4A1 COL4A3	7.34e-05	8	57	2	10382266
Pubmed	USP11 Is a Negative Regulator to γH2AX Ubiquitylation by RNF8/RNF168.	USP8 H2AX	7.34e-05	8	57	2	26507658
Pubmed	Discoidin domain receptor 1 functions in axon extension of cerebellar granule neurons.	COL4A1 COL4A3	7.34e-05	8	57	2	10970885
Pubmed	MDM2 mediates nonproteolytic polyubiquitylation of the DEAD-Box RNA helicase DDX24.	RBM10 NCL PIP4K2C	7.74e-05	50	57	3	24980433
Pubmed	Comparative proteomic analysis of supportive and unsupportive extracellular matrix substrates for human embryonic stem cell maintenance.	COL4A1 COL5A1 COL6A2	7.74e-05	50	57	3	23658023
Pubmed	High-Confidence Interactome for RNF41 Built on Multiple Orthogonal Assays.	FLNA USP8 AHNAK	7.74e-05	50	57	3	29560723
Interaction	PHLPP1 interactions	FLNA EPS15L1 TCOF1 RBM10 AHNAK KIAA1217 ZNF318 SNRPA1 KIFC1	3.69e-07	333	57	9	int:PHLPP1
Interaction	DCN interactions	COL4A1 COL4A3 COL5A1 FLNA	6.54e-06	43	57	4	int:DCN
Interaction	LAIR2 interactions	PDIA4 COL4A1 COL5A1 COL6A2	1.11e-05	49	57	4	int:LAIR2
Interaction	HDGFL2 interactions	PDIA4 BRD2 TCOF1 H2AX NCL PIP4K2C	1.78e-05	194	57	6	int:HDGFL2
Interaction	OBSL1 interactions	PDIA4 FLNA BRD2 TCOF1 RBM10 AHNAK PCLO NCL SNRPA1 DDX5 PHLDB2	3.79e-05	902	57	11	int:OBSL1
Interaction	ZBTB1 interactions	FLNA RBM10 TWNK NCL SNRPA1	3.83e-05	134	57	5	int:ZBTB1
Interaction	MMP9 interactions	COL4A1 COL4A3 COL5A1 COL6A2	3.86e-05	67	57	4	int:MMP9
Interaction	ARRB2 interactions	FLNA BRD2 TCOF1 RBM10 H2AX NCL PRDM16 DDX5	3.92e-05	454	57	8	int:ARRB2
Interaction	DDX23 interactions	ZNF512B BRD2 TCOF1 RBM10 H2AX NCL PIP4K2C DDX5	5.80e-05	480	57	8	int:DDX23
Interaction	ADARB1 interactions	FLNA TCOF1 RBM10 AHNAK H2AX NCL SNRPA1 DDX5	6.60e-05	489	57	8	int:ADARB1
Interaction	NAA40 interactions	ZNF512B FLNA USP8 EPS15L1 TCOF1 RBM10 AHNAK KIAA1217 NCL ZNF318 DDX5	7.87e-05	978	57	11	int:NAA40
Interaction	HTATSF1 interactions	ZNF512B TCOF1 H2AX NCL SNRPA1	8.13e-05	157	57	5	int:HTATSF1
Interaction	CCDC8 interactions	ZNF512B PDIA4 FLNA AHNAK NCL ZNF318 DDX5 PHLDB2 KIFC1	8.64e-05	656	57	9	int:CCDC8
Interaction	SMC5 interactions	ZNF512B FLNA EPS15L1 BRD2 RBM10 AHNAK NCL ZNF318 SNRPA1 DDX5 KIFC1	9.60e-05	1000	57	11	int:SMC5
Interaction	H1-2 interactions	PDIA4 COL5A1 FLNA BRD2 TCOF1 AHNAK PAFAH1B1 H2AX NCL	9.70e-05	666	57	9	int:H1-2
Interaction	CUL7 interactions	PDIA4 FLNA TCOF1 RBM10 AHNAK COL27A1 NCL SNRPA1 DDX5 PHLDB2	1.15e-04	845	57	10	int:CUL7
Interaction	NSD2 interactions	ZNF512B FLNA BRD2 TCOF1 RBM10 NCL	1.31e-04	278	57	6	int:NSD2
Interaction	KCNA3 interactions	PDIA4 COL4A3 EPS15L1 TCOF1 AHNAK SPEF2 COL27A1 CC2D1B SNRPA1 DDX5	1.47e-04	871	57	10	int:KCNA3
Interaction	PLOD1 interactions	PDIA4 COL4A1 COL5A1 COL6A2 AHNAK H2AX	1.72e-04	292	57	6	int:PLOD1
Interaction	CHMP4B interactions	COL5A1 FLNA USP8 TCOF1 AHNAK CC2D1B NCL SNRPA1 DDX5	1.88e-04	727	57	9	int:CHMP4B
Interaction	MCPH1 interactions	FLNA USP8 COL27A1 H2AX	1.91e-04	101	57	4	int:MCPH1
Interaction	ARRB1 interactions	FLNA TCOF1 RBM10 H2AX NCL PRDM16	2.13e-04	304	57	6	int:ARRB1
Interaction	KCTD10 interactions	FLNA PCLO PAFAH1B1 NCL DDX5	2.41e-04	198	57	5	int:KCTD10
Interaction	CHD4 interactions	ZNF512B BRD2 TCOF1 RBM10 AHNAK H2AX NCL SNRPA1 PRDM16 DDX5	2.68e-04	938	57	10	int:CHD4
Interaction	CSNK2A1 interactions	BRD2 TCOF1 RBM10 PAFAH1B1 SRF H2AX NCL PIP4K2C PRDM16 FCHO1	3.12e-04	956	57	10	int:CSNK2A1
Interaction	H2BC13 interactions	PDIA4 TCOF1 PCLO H2AX NCL	3.16e-04	210	57	5	int:H2BC13
Interaction	C1QTNF1 interactions	COL4A1 COL5A1 COL6A2	3.18e-04	47	57	3	int:C1QTNF1
Interaction	H2BC5 interactions	PDIA4 TCOF1 PCLO H2AX CC2D1B NCL	3.36e-04	331	57	6	int:H2BC5
Cytoband	Ensembl 112 genes in cytogenetic band chr2q37	INPP5D TWIST2 NCL	2.83e-03	226	57	3	chr2q37
Cytoband	2q37.1	INPP5D NCL	3.18e-03	67	57	2	2q37.1
Cytoband	Ensembl 112 genes in cytogenetic band chr6p21	BRD2 SRF ZNF318 KIFC1	3.56e-03	503	57	4	chr6p21
Cytoband	19p13.11	EPS15L1 FCHO1	3.76e-03	73	57	2	19p13.11
GeneFamily	Collagens	COL4A1 COL4A3 COL5A1 COL6A2 COL27A1	6.76e-08	46	42	5	490
GeneFamily	DNA helicases	TWNK NCL	7.01e-04	17	42	2	1167
GeneFamily	Pleckstrin homology domain containing\|Rho guanine nucleotide exchange factors\|C2 domain containing	PCLO CC2D1B	3.16e-03	36	42	2	823
Coexpression	NABA_COLLAGENS	COL4A1 COL4A3 COL5A1 COL6A2 COL27A1	3.67e-08	43	57	5	MM17060
Coexpression	NABA_COLLAGENS	COL4A1 COL4A3 COL5A1 COL6A2 COL27A1	4.14e-08	44	57	5	M3005
Coexpression	HU_FETAL_RETINA_FIBROBLAST	COL4A1 IL11RA COL5A1 FLNA COL6A2 AHNAK COL27A1 PHLDB2	1.78e-06	385	57	8	M39264
Coexpression	BONOME_OVARIAN_CANCER_POOR_SURVIVAL_DN	TWNK ASPSCR1 FCHO1	1.46e-05	22	57	3	M15807
Coexpression	TABULA_MURIS_SENIS_LIVER_NK_CELL_AGEING	BRD2 AHNAK GZMH PAFAH1B1 H2AX NCL	3.79e-05	288	57	6	MM3751
Coexpression	DESCARTES_FETAL_EYE_STROMAL_CELLS	IL11RA COL5A1 COL6A2 TWIST2	4.66e-05	91	57	4	M40180
Coexpression	ROZANOV_MMP14_TARGETS_SUBSET	COL4A1 COL5A1 COL6A2	5.08e-05	33	57	3	M9167
Coexpression	CLASPER_LYMPHATIC_VESSELS_DURING_METASTASIS_DN	COL5A1 COL6A2 TWIST2	6.07e-05	35	57	3	M11788
Coexpression	CHARAFE_BREAST_CANCER_LUMINAL_VS_MESENCHYMAL_DN	COL4A1 COL5A1 COL6A2 PAFAH1B1 NAV3 TWIST2 PHLDB2	6.50e-05	465	57	7	M9192
Coexpression	CLASPER_LYMPHATIC_VESSELS_DURING_METASTASIS_DN	COL5A1 COL6A2 TWIST2	6.62e-05	36	57	3	MM1212
Coexpression	GSE43956_WT_VS_SGK1_KO_TH17_DIFFERENTIATED_CD4_TCELL_DN	SHD IL11RA AHNAK TWIST2 FCHO1	7.46e-05	200	57	5	M9628
Coexpression	NABA_BASEMENT_MEMBRANES	COL4A1 COL4A3 COL6A2	9.10e-05	40	57	3	M5887
Coexpression	BILD_MYC_ONCOGENIC_SIGNATURE	COL5A1 TCOF1 AHNAK TWNK NCL	9.19e-05	209	57	5	M2069
Coexpression	BURTON_ADIPOGENESIS_4	COL6A2 H2AX SNRPA1	1.30e-04	45	57	3	M1605
Coexpression	BURTON_ADIPOGENESIS_4	COL6A2 H2AX SNRPA1	1.39e-04	46	57	3	MM1187
Coexpression	TABULA_MURIS_SENIS_LIMB_MUSCLE_T_CELL_AGEING	BRD2 AHNAK PAFAH1B1 NCL DDX5	1.62e-04	236	57	5	MM3743
Coexpression	AIZARANI_LIVER_C33_STELLATE_CELLS_2	COL4A1 COL5A1 FLNA COL6A2	1.65e-04	126	57	4	M39132
Coexpression	GSE13522_WT_VS_IFNG_KO_SKING_T_CRUZI_Y_STRAIN_INF_DN	ZNF512B CDYL2 TWNK CC2D1B	1.70e-04	127	57	4	M2915
CoexpressionAtlas	BM Top 100 - endometrium	COL5A1 COL6A2 COL27A1 TWIST2	2.58e-05	66	55	4	BM Top 100 - endometrium
ToppCell	wk_08-11-Mesenchymal-Fibroblast-Adventitial_fibro\|wk_08-11 / Celltypes from embryonic and fetal-stage human lung	IL11RA COL5A1 COL6A2 MSC AHNAK NAV3 TWIST2	5.88e-09	196	57	7	eed9fe83ffc1f79493b70778962a671dd9f481e0
ToppCell	5'-GW_trimst-2-LargeIntestine-Mesenchymal-fibroblastic-Stromal_3_(C7+)\|GW_trimst-2 / Celltypes from developing, pediatric, Crohn's, & adult GI tract	IL11RA COL5A1 COL6A2 MSC AHNAK NAV3 TWIST2	6.09e-09	197	57	7	2744cc94883c5d0424677cf5093bbab622933e9b
ToppCell	5'-GW_trimst-2-SmallIntestine-Mesenchymal-fibroblastic-Stromal_3_(C7+)\|GW_trimst-2 / Celltypes from developing, pediatric, Crohn's, & adult GI tract	IL11RA COL5A1 COL6A2 MSC AHNAK NAV3 TWIST2	6.53e-09	199	57	7	103f657132e830a0e5efeb745afb4b77c208a1fa
ToppCell	Brain_organoid-organoid_Tanaka_cellReport-3m-Neuroepithelial-Proteoglycan-expressing_cell\|3m / Sample Type, Dataset, Time_group, and Cell type.	COL4A1 IL11RA COL5A1 COL6A2 MSC AHNAK TWIST2	6.76e-09	200	57	7	94ef227b2162ba77af33b8cc8aaa4a7e3bdf79a7
ToppCell	Brain_organoid-organoid_Tanaka_cellReport-3m-Neuroepithelial\|3m / Sample Type, Dataset, Time_group, and Cell type.	COL4A1 IL11RA COL5A1 COL6A2 MSC AHNAK TWIST2	6.76e-09	200	57	7	429028c3112d279b26abf3296e01b1884b4b7fcb
ToppCell	COVID-19-Heart-VSMC\|Heart / Disease (COVID-19 only), tissue and cell type	COL4A1 FLNA SUSD5 COL27A1 CACNA1H PRDM16	1.12e-07	179	57	6	a69ad6912b5c10bb9f9d800f724c792341e9bab1
ToppCell	-Donor_07\|World / lung cells shred on cell class, cell subclass, sample id	COL4A1 COL5A1 COL6A2 MSC GZMH NAV3	1.49e-07	188	57	6	038f48e8daaeb72716e975d22a6b004a90654960
ToppCell	5'-GW_trimst-1.5-LargeIntestine-Mesenchymal-fibroblastic\|GW_trimst-1.5 / Celltypes from developing, pediatric, Crohn's, & adult GI tract	IL11RA COL5A1 COL6A2 AHNAK NAV3 TWIST2	1.97e-07	197	57	6	05e303fff86db31f7b742324c64980eb2b9cff9a
ToppCell	3'-GW_trimst-1-SmallIntestine-Mesenchymal-fibroblastic-Stromal_3_(C7+)\|GW_trimst-1 / Celltypes from developing, pediatric, Crohn's, & adult GI tract	IL11RA COL5A1 COL6A2 AHNAK NAV3 TWIST2	2.03e-07	198	57	6	9541d68a1a6247dbd7161a62644eea6527c2c8ff
ToppCell	Tracheal-NucSeq-Stromal-Myofibroblastic-Muscle_smooth_systemic_arterial\|NucSeq / Cell types per location group and 10X technology with lineage, and cell group designations	COL4A1 FLNA COL6A2 CACNA1H PRDM16 PHLDB2	2.03e-07	198	57	6	7dd874b09c81cc512ccc1e9b65f290a5f94d736e
ToppCell	5'-GW_trimst-1.5-LargeIntestine-Mesenchymal-fibroblastic-Stromal_3_(C7+)\|GW_trimst-1.5 / Celltypes from developing, pediatric, Crohn's, & adult GI tract	IL11RA COL5A1 COL6A2 AHNAK NAV3 TWIST2	2.03e-07	198	57	6	cfe2d52b19a1b4c2c2076fa1d5a69baf21a49623
ToppCell	3'-GW_trimst-2-LargeIntestine-Mesenchymal-fibroblastic-Stromal_3_(C7+)\|GW_trimst-2 / Celltypes from developing, pediatric, Crohn's, & adult GI tract	IL11RA COL5A1 COL6A2 MSC AHNAK NAV3	2.09e-07	199	57	6	bfc157be6e9f84739848eb19b718de5b17f3fa88
ToppCell	Tracheal-10x5prime-Stromal-Myofibroblastic-Muscle_smooth_pulmonary\|10x5prime / Cell types per location group and 10X technology with lineage, and cell group designations	COL4A1 FLNA COL6A2 SUSD5 CACNA1H PRDM16	2.09e-07	199	57	6	8ff0fdcbe9661b013913731ec8b53d84836ca865
ToppCell	3'-GW_trimst-2-SmallIntestine-Mesenchymal-fibroblastic-Stromal_3_(C7+)\|GW_trimst-2 / Celltypes from developing, pediatric, Crohn's, & adult GI tract	IL11RA COL5A1 COL6A2 MSC AHNAK NAV3	2.09e-07	199	57	6	9846d6a31635fde759d55674631c11ab9270a603
ToppCell	5'-GW_trimst-2-LargeIntestine-Mesenchymal\|GW_trimst-2 / Celltypes from developing, pediatric, Crohn's, & adult GI tract	COL4A1 COL5A1 FLNA COL6A2 AHNAK TWIST2	2.09e-07	199	57	6	3d8c76e3d05acf72a35ca755b51579fc3ae63562
ToppCell	5'-GW_trimst-1.5-SmallIntestine-Mesenchymal-fibroblastic-Stromal_3_(C7+)\|GW_trimst-1.5 / Celltypes from developing, pediatric, Crohn's, & adult GI tract	IL11RA COL5A1 MSC AHNAK NAV3 TWIST2	2.09e-07	199	57	6	83383d9ae4f501754fd3da0215ce6f0e3c70562c
ToppCell	Tracheal-NucSeq-Stromal-Fibroblastic\|NucSeq / Cell types per location group and 10X technology with lineage, and cell group designations	COL4A1 COL5A1 COL6A2 NAV3 TWIST2 PHLDB2	2.15e-07	200	57	6	b4ccffdd79526c85e5273d27b668dbddcddba1ee
ToppCell	Tracheal-NucSeq-Stromal\|NucSeq / Cell types per location group and 10X technology with lineage, and cell group designations	COL4A1 COL5A1 COL6A2 NAV3 TWIST2 PHLDB2	2.15e-07	200	57	6	c318d14bd6fd6f42c597eb55ac9e2f48008aeb9b
ToppCell	Tracheal-NucSeq-Stromal-Fibroblastic-Fibro_adventitial\|NucSeq / Cell types per location group and 10X technology with lineage, and cell group designations	COL4A1 COL5A1 COL6A2 NAV3 TWIST2 PHLDB2	2.15e-07	200	57	6	0c25d56292b9e5fefa4521b72635449be1ffd6fe
ToppCell	Transplant_Alveoli_and_parenchyma-Epithelial-Type_1_alveolar\|Epithelial / Tissue, Lineage and Cell class of Lung Cells from 10X	COL4A1 COL4A3 AHNAK ERICH6 PHLDB2	1.93e-06	160	57	5	58ed3a074932ccc951e07868dfdc61b99ae1cc2b
ToppCell	primary_visual_cortex-Neuronal-glutamatergic_neuron-L6_CT\|primary_visual_cortex / Per Region, Lineage, Cell class, Cell type, Cell subtype	IL11RA COL5A1 FEZF2 SCG3 AHNAK	2.05e-06	162	57	5	58da6bc04cdac0002b0e6a751c96ff95e1a7f70f
ToppCell	Adult-Mesenchymal-chondrocyte-D175\|Adult / Lineage, Cell type, age group and donor	COL5A1 COL6A2 COL27A1 NAV3 TWNK	2.45e-06	168	57	5	14071b961c9bdb54a8259b12a88237b802cbde36
ToppCell	10x_3'_v3-blood_(10x_3'_v3)-hematologic-hematopoietic_progenitor-hematopoietic_stem_cell\|blood_(10x_3'_v3) / Per Platform+tissue_group, by lineage_subgroup, cell_group, cell_type	SHD COL5A1 PCLO HFM1 PRDM16	2.59e-06	170	57	5	5bb577e2c4bd275fbe4ee23ff8c007b2fcb90e56
ToppCell	10x_3'_v3-blood_(10x_3'_v3)-hematologic-hematopoietic_progenitor\|blood_(10x_3'_v3) / Per Platform+tissue_group, by lineage_subgroup, cell_group, cell_type	SHD COL5A1 PCLO HFM1 PRDM16	2.91e-06	174	57	5	66df78280f657978c4a568010ae7d7943869af90
ToppCell	COVID-19-Heart-VSMC\|COVID-19 / Disease (COVID-19 only), tissue and cell type	COL4A1 SUSD5 COL27A1 CACNA1H PRDM16	2.99e-06	175	57	5	1125f0d3a5b2388fa77a820dea0288e824d84a82
ToppCell	3'-GW_trimst-1.5-LargeIntestine-Mesenchymal-fibroblastic-Stromal_3_(C7+)\|GW_trimst-1.5 / Celltypes from developing, pediatric, Crohn's, & adult GI tract	IL11RA COL6A2 SUSD5 NAV3 TWIST2	3.16e-06	177	57	5	7af1a19692f7fe8f691178a4e57d62bc379e3d56
ToppCell	5'-Parenchyma_lung-Mesenchymal-Mesenchymal_Myocytic-pericyte_cell-Pericytes-Pericytes_L.2.3.3.0\|5' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5	COL4A1 COL5A1 COL6A2 HFM1 CACNA1H	3.34e-06	179	57	5	dc6cd46fa652b296ddbc41855f6377946d0a4cdc
ToppCell	PND14-Mesenchymal-Mesenchymal_structural-Fibroblastic-AF2\|PND14 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif	IL11RA COL5A1 COL6A2 NAV3 TWIST2	3.52e-06	181	57	5	3462aa1c08fbaf613b6278ab2c7a5a0940bf537d
ToppCell	PND14-Mesenchymal-Mesenchymal_structural-Fibroblastic-AF2-AF2_mature\|PND14 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif	IL11RA COL5A1 COL6A2 NAV3 TWIST2	3.52e-06	181	57	5	6730e249cac55ae892cc567d9211615882f3dab4
ToppCell	5'-Airway_Nasal-Mesenchymal-Fibroblastic-fibroblastic_type_2\|5' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5	COL5A1 COL6A2 MSC COL27A1 TWIST2	3.72e-06	183	57	5	803376f5260de83c48d4f7301278d078a32b3e6e
ToppCell	5'-Airway_Nasal-Mesenchymal-Fibroblastic-fibroblastic_type_2-Peribronchial_fibroblasts-Peribronchial_fibroblasts_L.2.1.3.1\|5' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5	COL5A1 COL6A2 MSC COL27A1 TWIST2	3.72e-06	183	57	5	6d98973098c6d20c5305bce6a83a549a7d8dbfba
ToppCell	5'-Airway_Nasal-Mesenchymal-Fibroblastic-fibroblastic_type_2-Peribronchial_fibroblasts\|5' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5	COL5A1 COL6A2 MSC COL27A1 TWIST2	3.72e-06	183	57	5	cc7f5a17b40e8d901885174922e5fa8877643071
ToppCell	5'-Adult-LargeIntestine-Mesenchymal-myocytic-myofibroblast\|Adult / Celltypes from developing, pediatric, Crohn's, & adult GI tract	COL4A1 COL5A1 FLNA COL6A2 PHLDB2	3.72e-06	183	57	5	af8d86f15a549064530d94bd47081daf59d58ecd
ToppCell	Control-Epithelial-ATI\|Epithelial / Disease state, Lineage and Cell class	COL4A1 COL4A3 FLNA AHNAK PHLDB2	4.13e-06	187	57	5	3a032432f780525f4f4c2a358897d9989b1ecae7
ToppCell	renal_cortex_nuclei-Renal_AKI_(acute_kidney_injury)-Mesenchymal-Fibroblast-kidney_interstitial_fibroblast-Adaptive_/_Maladaptive_/_Repairing_Fibroblast\|Renal_AKI_(acute_kidney_injury) / Celltypes from Cells and Nuclei per compartment and clinical group	COL5A1 COL6A2 KIAA1217 NAV3 TWIST2	4.24e-06	188	57	5	ce85a56ac27a6432421dde93a1bafa8b943244b9
ToppCell	5'-Adult-LargeIntestine-Mesenchymal-fibroblastic-Stromal_2_(NPY+)\|Adult / Celltypes from developing, pediatric, Crohn's, & adult GI tract	COL4A1 COL5A1 COL6A2 MSC COL27A1	4.24e-06	188	57	5	997dcfc4f08738ab398d8abc15e4fd2fc6619862
ToppCell	renal_medulla_nuclei-Hypertensive_with+without-CKD-Mesenchymal-Myocytic_interstitial_cell-Vascular_Smooth_Muscle_Cell\|Hypertensive_with+without-CKD / Celltypes from Cells and Nuclei per compartment and clinical group	FLNA COL6A2 SUSD5 GBX1 CACNA1H	4.35e-06	189	57	5	127ad2ba3e794df8cce2eee3e4171bccb5aad51b
ToppCell	COPD-Epithelial-ATI\|Epithelial / Disease state, Lineage and Cell class	COL4A1 COL4A3 FLNA AHNAK PHLDB2	4.35e-06	189	57	5	14e8e57e4db336fbef005270647983b4edf407c0
ToppCell	renal_medulla_nuclei-Hypertensive_with+without-CKD-Mesenchymal-Myocytic_interstitial_cell-Vascular_Smooth_Muscle_Cell-\|Hypertensive_with+without-CKD / Celltypes from Cells and Nuclei per compartment and clinical group	FLNA COL6A2 SUSD5 GBX1 CACNA1H	4.35e-06	189	57	5	2cfb4d12f75678d1619f4743838a0e954bd57761
ToppCell	MatrixFB-Fibroblast-C\|MatrixFB / shred on cell class and cell subclass (v4)	IL11RA COL5A1 COL6A2 AHNAK TWIST2	4.46e-06	190	57	5	d0106f7a21292f0b96ce4337ec3efbb1bd78dd0a
ToppCell	droplet-Mammary_Gland-nan-3m-Mesenchymal\|Mammary_Gland / Skin_Bladder_Kidney_Mammary_Gland - method, tissue, subtissue, age, lineage, cell ontology and free annotation	COL4A1 IL11RA COL5A1 COL6A2 TWIST2	4.46e-06	190	57	5	bd0d68dc1b6f388190a6ba8a83b011619abe2bdd
ToppCell	droplet-Mammary_Gland-nan-3m-Mesenchymal-stromal_cell\|Mammary_Gland / Skin_Bladder_Kidney_Mammary_Gland - method, tissue, subtissue, age, lineage, cell ontology and free annotation	COL4A1 IL11RA COL5A1 COL6A2 TWIST2	4.46e-06	190	57	5	e275de94468872e70cf305b3b450823d4c9c5e3f
ToppCell	renal_cortex_nuclei-Renal_AKI_(acute_kidney_injury)-Mesenchymal-Fibroblast-kidney_interstitial_fibroblast\|Renal_AKI_(acute_kidney_injury) / Celltypes from Cells and Nuclei per compartment and clinical group	COL5A1 COL6A2 KIAA1217 NAV3 TWIST2	4.46e-06	190	57	5	efb757f11c2809e66ddb48a5c84f5433f111cb7c
ToppCell	droplet-Mammary_Gland-nan-3m-Mesenchymal-stromal_cell\|Mammary_Gland / Skin_Bladder_Kidney_Mammary_Gland - method, tissue, subtissue, age, lineage, cell ontology and free annotation	COL4A1 IL11RA COL5A1 COL6A2 TWIST2	4.46e-06	190	57	5	ee2f4a55d2fd18b83e55399b5b5697a15a2d2e70
ToppCell	renal_papilla_nuclei-Adult_normal_reference-Mesenchymal-Fibroblast-high_collagen-matrisome_fibroblast-\|Adult_normal_reference / Celltypes from Cells and Nuclei per compartment and clinical group	COL4A1 COL5A1 COL6A2 COL27A1 TWIST2	4.46e-06	190	57	5	2e592323085ba9c019d678ac2a784462ab470ed9
ToppCell	renal_papilla_nuclei-Adult_normal_reference-Mesenchymal-Myocytic_interstitial_cell-Myofibroblast-\|Adult_normal_reference / Celltypes from Cells and Nuclei per compartment and clinical group	COL4A1 COL5A1 FLNA COL6A2 NAV3	4.46e-06	190	57	5	562ee3b025c29edf07b8b344323edb49d82f1c7e
ToppCell	PND10\|World / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif	COL4A1 FLNA AHNAK NCL PHLDB2	4.46e-06	190	57	5	d67e2814047c8df2ae4b7bc8be9539f5df6ecef2
ToppCell	LV-01._Fibroblast_I\|World / Chamber and Cluster_Paper	COL4A1 COL4A3 COL5A1 COL6A2 DDX5	4.46e-06	190	57	5	12992ec80a7b4f4f17de693f0719ee061a9918fd
ToppCell	renal_papilla_nuclei-Adult_normal_reference-Mesenchymal-Myocytic_interstitial_cell-Myofibroblast\|Adult_normal_reference / Celltypes from Cells and Nuclei per compartment and clinical group	COL4A1 COL5A1 FLNA COL6A2 NAV3	4.46e-06	190	57	5	f5fb989afabb49d64d91324570cd8c80a4b9e67d
ToppCell	renal_papilla_nuclei-Adult_normal_reference-Mesenchymal-Fibroblast-high_collagen-matrisome_fibroblast\|Adult_normal_reference / Celltypes from Cells and Nuclei per compartment and clinical group	COL4A1 COL5A1 COL6A2 COL27A1 TWIST2	4.46e-06	190	57	5	445952b70abffadb6ccc1ed4bbf61a88b06b73b3
ToppCell	renal_papilla_nuclei-Adult_normal_reference-Mesenchymal\|Adult_normal_reference / Celltypes from Cells and Nuclei per compartment and clinical group	COL4A1 COL5A1 COL6A2 COL27A1 TWIST2	4.58e-06	191	57	5	806b94f567ea09a9f443cd4091e70cdb1253ac08
ToppCell	renal_cortex_nuclei-CKD+DKD_normotensive-Mesenchymal-Myocytic_interstitial_cell\|CKD+DKD_normotensive / Celltypes from Cells and Nuclei per compartment and clinical group	COL4A1 COL5A1 FLNA COL6A2 CACNA1H	4.58e-06	191	57	5	04c4d454b57e29a8d1dcdeb4678ce71bdc29b77b
ToppCell	renal_cortex_nuclei-Renal_AKI_(acute_kidney_injury)-Mesenchymal-Fibroblast\|Renal_AKI_(acute_kidney_injury) / Celltypes from Cells and Nuclei per compartment and clinical group	COL5A1 COL6A2 KIAA1217 NAV3 TWIST2	4.70e-06	192	57	5	5105e4b577408b4e1a62d0a44c23c2b830ccad88
ToppCell	renal_cortex_nuclei-Renal_AKI_(acute_kidney_injury)-Mesenchymal\|Renal_AKI_(acute_kidney_injury) / Celltypes from Cells and Nuclei per compartment and clinical group	COL5A1 COL6A2 KIAA1217 NAV3 TWIST2	4.70e-06	192	57	5	d3c1ad4667a1e223a83ca0fcd5991a0b96f1199a
ToppCell	PCW_05-06-Mesenchymal-Mesenchymal_fibroblastic-mes_chondroblast_(18)\|PCW_05-06 / Celltypes from embryonic and fetal-stage human lung	IL11RA SUSD5 COL27A1 PRDM16 PHLDB2	4.70e-06	192	57	5	d0649410cf5eacdb0c1dce70e37c7473ef5fddfa
ToppCell	Adult-Mesenchymal-matrix_fibroblast_2_cell\|Adult / Lineage, Cell type, age group and donor	COL5A1 COL6A2 NAV3 TWIST2 PHLDB2	4.70e-06	192	57	5	d21f0f577156f17c899b08871046a26b88aea011
ToppCell	droplet-Limb_Muscle-nan-18m-Mesenchymal-nan\|Limb_Muscle / Tongue_Heart_Limb_Muscle_Aorta_Diaphragm - method, tissue, subtissue, age, lineage, cell ontology and free annotation	COL4A1 IL11RA COL5A1 COL6A2 MSC	4.70e-06	192	57	5	2d9e2262f1342fe17735f21f733c029d1275e955
ToppCell	5'-Adult-LargeIntestine-Mesenchymal-myocytic\|Adult / Celltypes from developing, pediatric, Crohn's, & adult GI tract	COL4A1 COL5A1 FLNA COL6A2 PHLDB2	4.82e-06	193	57	5	146e8c148478ab61b1c1dbaf1ee98a8cd4a0ff8a
ToppCell	droplet-Fat-Scat-18m-Mesenchymal-Cd34+\|Fat / Fat_BAT_GAT_MAT_SCAT - method, tissue, subtissue, age, lineage, cell ontology and free annotation	IL11RA COL5A1 COL6A2 COL27A1 TWIST2	4.82e-06	193	57	5	316ebdf15f75d88c348f909b643fcd315364ca84
ToppCell	facs-Brain_Myeloid-Hippocampus-3m-Myeloid-microglial_cell\|Brain_Myeloid / Brain_Non-Myeloid_Brain_Myeloid - method, tissue, subtissue, age, lineage, cell ontology and free annotation	PDIA4 COL6A2 USP8 INPP5D NAV3	4.82e-06	193	57	5	9c16032bc03df8760ae199e8f19fdafa4c3f1827
ToppCell	droplet-Fat-Scat-18m-Mesenchymal-mesenchymal_stem_cell_of_adipose\|Fat / Fat_BAT_GAT_MAT_SCAT - method, tissue, subtissue, age, lineage, cell ontology and free annotation	IL11RA COL5A1 COL6A2 COL27A1 TWIST2	4.82e-06	193	57	5	1afdd3f7d703f4204a2cbfe40e135ac7b09213f7
ToppCell	droplet-Fat-Scat-18m-Mesenchymal\|Fat / Fat_BAT_GAT_MAT_SCAT - method, tissue, subtissue, age, lineage, cell ontology and free annotation	IL11RA COL5A1 COL6A2 COL27A1 TWIST2	4.82e-06	193	57	5	8dc6db335678f3a5cfd36026ad811fed8d9cb4bc
ToppCell	Children_(3_yrs)-Mesenchymal-matrix_fibroblast_2_cell-D139\|Children_(3_yrs) / Lineage, Cell type, age group and donor	COL4A1 COL6A2 NAV3 TWIST2 PHLDB2	4.82e-06	193	57	5	261cafc167c86ab277be4ea7f08b0173e2dde26e
ToppCell	Fetal_29-31_weeks-Mesenchymal-matrix_fibroblast_2_cell-D150\|Fetal_29-31_weeks / Lineage, Cell type, age group and donor	IL11RA COL5A1 COL6A2 NAV3 TWIST2	4.94e-06	194	57	5	439d3f17c1f4736122b330e98add9292c7036a8e
ToppCell	droplet-Trachea-nan-3m-Mesenchymal-mesenchymal_progenitor_cell\|Trachea / Lung_Trachea - method, tissue, subtissue, age, lineage, cell ontology and free annotation	COL4A1 IL11RA COL5A1 COL6A2 TWIST2	4.94e-06	194	57	5	3d25d6ebec8d1b6001f602257cd15b3ba04cf0c1
ToppCell	droplet-Trachea-3m-Mesenchymal-myofibroblast-tracheobronchial_smooth_muscle_cell-smooth_muscle_cell_of_trachea_l1\|3m / method, tissue, age, lineage, sublineage, cell ontologies, cell type and subtype	COL4A1 IL11RA COL5A1 COL6A2 TWIST2	4.94e-06	194	57	5	ff19fb5bc7feae3e774ef4ab720beb9dec219f45
ToppCell	(1)_T_CD8_CTL\|World / Spleen cell shreds - cell class (v1) and cell subclass (v1)	FLNA COL6A2 MSC AHNAK GZMH	5.07e-06	195	57	5	f582b854e5a4c52764aad5abe4e28ea77a7445f7
ToppCell	Children_(3_yrs)-Mesenchymal-matrix_fibroblast_2_cell-D032\|Children_(3_yrs) / Lineage, Cell type, age group and donor	COL5A1 COL6A2 NAV3 TWIST2 PHLDB2	5.07e-06	195	57	5	ff0aa455e9844a6d7ae57ff59fb6cea825cf1fc2
ToppCell	5'-Parenchyma_lung-Mesenchymal-Mesenchymal_Myocytic-tracheobronchial_smooth_muscle_cell-Smooth_muscle-Smooth_muscle_L.2.3.0.0\|5' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5	COL4A1 FLNA COL6A2 SUSD5 CACNA1H	5.07e-06	195	57	5	7155cc12cc6a97efd626bbdb95249fb3d7041dcf
ToppCell	3'-Pediatric_IBD-SmallIntestine-Mesenchymal-Pericytes-Contractile_pericyte_(PLN+)\|Pediatric_IBD / Celltypes from developing, pediatric, Crohn's, & adult GI tract	FLNA SUSD5 CACNA1H PRDM16 PHLDB2	5.07e-06	195	57	5	5dc874641ad9537e4c1369825c1fb0a59f12a83d
ToppCell	5'-Parenchyma_lung-Mesenchymal-Mesenchymal_Myocytic-tracheobronchial_smooth_muscle_cell\|5' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5	COL4A1 FLNA COL6A2 SUSD5 CACNA1H	5.07e-06	195	57	5	a52ee3ad6cd317f10b9308450517861ef2e363bb
ToppCell	COVID-19_Severe-CD8+_Tem\|COVID-19_Severe / Disease condition and Cell class	FLNA COL6A2 MSC AHNAK GZMH	5.07e-06	195	57	5	ff7ae62393e1c858a10592db8e6d9f36b8bae396
ToppCell	5'-Parenchyma_lung-Mesenchymal-Mesenchymal_Myocytic-tracheobronchial_smooth_muscle_cell-Smooth_muscle\|5' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5	COL4A1 FLNA COL6A2 SUSD5 CACNA1H	5.07e-06	195	57	5	b3660779f274ca97dd844cf83f62d85ba88cb182
ToppCell	control-Lymphocytic-CD8_T_cells\|Lymphocytic / Cohort 2 (Rhapsody WB + PBMC) with disease condition, lineage and cell classs	FLNA COL6A2 MSC AHNAK GZMH	5.07e-06	195	57	5	55b9052336cab3e769a126ecaeef267d8e7bcaa8
ToppCell	droplet-Trachea-3m-Mesenchymal-myofibroblast\|3m / method, tissue, age, lineage, sublineage, cell ontologies, cell type and subtype	IL11RA COL5A1 COL6A2 COL27A1 TWIST2	5.07e-06	195	57	5	0feb6ebe7b4b781dec7cfaef844140cfbf84b4b9
ToppCell	droplet-Trachea-3m-Mesenchymal-myofibroblast-tracheobronchial_smooth_muscle_cell\|3m / method, tissue, age, lineage, sublineage, cell ontologies, cell type and subtype	IL11RA COL5A1 COL6A2 COL27A1 TWIST2	5.07e-06	195	57	5	2a6f67875cef140b0e6b8401436719675c6b3665
ToppCell	(2)_5-FU\|World / Stress and Cell class	PDIA4 COL4A1 COL5A1 FLNA AHNAK	5.07e-06	195	57	5	e5b1d96fafeb2f3b1f4cdf6b2c9eddef36bca7ff
ToppCell	droplet-Bladder-nan-3m-Epithelial-bladder_mesenchymal_cell_(Car3+)\|Bladder / Skin_Bladder_Kidney_Mammary_Gland - method, tissue, subtissue, age, lineage, cell ontology and free annotation	COL4A1 IL11RA COL5A1 COL6A2 COL27A1	5.07e-06	195	57	5	095b8e0be385b6390420589124a95fa4ba3682ab
ToppCell	renal_cortex_nuclei-Adult_normal_reference-Mesenchymal-Myocytic_interstitial_cell\|Adult_normal_reference / Celltypes from Cells and Nuclei per compartment and clinical group	COL4A1 COL5A1 FLNA COL6A2 SUSD5	5.19e-06	196	57	5	b8759e6231e0254797d6c30930407b79440c57bb
ToppCell	IPF-Stromal-Myofibroblast\|World / Disease state, Lineage and Cell class	COL4A1 COL5A1 COL6A2 NAV3 TWIST2	5.19e-06	196	57	5	7fc9894ceb79dab9f0495acc84e2d6d0d1c69bb7
ToppCell	Epithelial_cells-AT1_cells\|Epithelial_cells / lung cells shred on cell class, cell subclass, sample id	COL4A1 COL4A3 FLNA AHNAK PHLDB2	5.19e-06	196	57	5	6c99d29162848161c1f166a032320f87a5d5a631
ToppCell	IPF-Stromal-Myofibroblast\|IPF / Disease state, Lineage and Cell class	COL4A1 COL5A1 COL6A2 NAV3 TWIST2	5.19e-06	196	57	5	2d0a48e49b3b37bb66e33e74c52915911e1f8a74
ToppCell	Control-Stromal-Fibroblast\|World / Disease state, Lineage and Cell class	COL5A1 COL6A2 NAV3 TWIST2 PHLDB2	5.19e-06	196	57	5	1ec7a4daa51b3156db97e1fd6cb925ad311bb4b5
ToppCell	Bronchial-NucSeq-Stromal-Myofibroblastic-Muscle_smooth_pulmonary\|NucSeq / Cell types per location group and 10X technology with lineage, and cell group designations	COL4A1 COL5A1 FLNA COL6A2 CACNA1H	5.32e-06	197	57	5	bf0520a94ebb1d2f94de9f526d17e0b0e8fe7052
ToppCell	Non-neuronal-Non-dividing-Radial_Glia-tRG\|World / Primary Cells by Cluster	COL5A1 FLNA AHNAK COL27A1 PRDM16	5.32e-06	197	57	5	61749ccafeb938c310cff1de5ff924a1c794325a
ToppCell	COVID-19-Fibroblasts-Intermediate_pathological_FB\|COVID-19 / group, cell type (main and fine annotations)	COL5A1 COL6A2 COL27A1 NAV3 PHLDB2	5.32e-06	197	57	5	f1c8936986123a3151140c374fcd62d6705c530b
ToppCell	droplet-Bladder-BLADDER-1m-Epithelial-bladder_mesenchymal_cell_(Car3+)\|Bladder / Skin_Bladder_Kidney_Mammary_Gland - method, tissue, subtissue, age, lineage, cell ontology and free annotation	COL4A1 IL11RA COL5A1 COL6A2 COL27A1	5.32e-06	197	57	5	86145bc1e585b4ae136e755cafd6579da2abfa65
ToppCell	Fibroblast\|World / shred by cell class for bronchial biopsy	COL4A1 COL5A1 FLNA COL6A2 CACNA1H	5.32e-06	197	57	5	8bf9846228b6b6721b10375fe54a2fb389ff64a6
ToppCell	3'-GW_trimst-1-LargeIntestine-Mesenchymal-fibroblastic\|GW_trimst-1 / Celltypes from developing, pediatric, Crohn's, & adult GI tract	IL11RA COL5A1 COL6A2 AHNAK TWIST2	5.32e-06	197	57	5	6668f0da54f3bf96769275e668cd57e00b8a5ef9
ToppCell	T/NK_cells-NKT_cell\|T/NK_cells / Lineage and Cell class	FLNA COL6A2 MSC AHNAK GZMH	5.32e-06	197	57	5	10702e61b510bfc7f54047ab3d8c700451a662b2
ToppCell	Non-neuronal-Non-dividing-Radial_Glia-tRG-25\|World / Primary Cells by Cluster	COL5A1 FLNA AHNAK COL27A1 PRDM16	5.32e-06	197	57	5	9d4ffa3680f92c91d0a081f9a8ec5ebfec6bdcf6
ToppCell	normal_Lung-Epithelial_cells-AT1\|Epithelial_cells / Location, Cell class and cell subclass	COL4A1 COL4A3 FLNA AHNAK PHLDB2	5.32e-06	197	57	5	7d19b93d6853828e2a036e37c4887edb1de4503c
ToppCell	COPD-Stromal\|COPD / Disease state, Lineage and Cell class	COL4A1 COL5A1 COL6A2 NAV3 TWIST2	5.32e-06	197	57	5	d5390d86acaa8c39f1da893e8d2271f9ed2951d7
ToppCell	3'-GW_trimst-1-LargeIntestine-Mesenchymal-fibroblastic-Stromal_3_(C7+)\|GW_trimst-1 / Celltypes from developing, pediatric, Crohn's, & adult GI tract	IL11RA COL5A1 COL6A2 AHNAK TWIST2	5.32e-06	197	57	5	7c275a2ac24a9a4f83fceda93a067e754837102f
ToppCell	3'-GW_trimst-1.5-SmallIntestine-Mesenchymal-fibroblastic-Stromal_3_(C7+)\|GW_trimst-1.5 / Celltypes from developing, pediatric, Crohn's, & adult GI tract	IL11RA COL5A1 COL6A2 MSC NAV3	5.32e-06	197	57	5	6b6440f1baad5680cf9e13ca3ab72a2c65523d59
ToppCell	COVID-19-Fibroblasts\|COVID-19 / group, cell type (main and fine annotations)	COL4A1 COL5A1 COL6A2 NAV3 PHLDB2	5.32e-06	197	57	5	fb847f2277609c31fffcdf49517243ce0684facf
ToppCell	5'-Adult-LargeIntestine-Mesenchymal-Pericytes\|Adult / Celltypes from developing, pediatric, Crohn's, & adult GI tract	COL4A1 FLNA SUSD5 CACNA1H PHLDB2	5.32e-06	197	57	5	68c23c23b6924892f4c238cf2f5abc7927e04fbc
ToppCell	10x3'2.3-week_17-19-Mesenchymal_myocytic-stroma-muscle_stem_cell\|week_17-19 / cell types per 3 fetal stages;per 3',per 5'	SHD COL4A1 IL11RA COL6A2 MSC	5.46e-06	198	57	5	55e583321f60c95898d93cd0d2615c6692db52ec
ToppCell	3'-Pediatric_IBD-SmallIntestine-Mesenchymal-fibroblastic-Stromal_4_(MMP1+)\|Pediatric_IBD / Celltypes from developing, pediatric, Crohn's, & adult GI tract	COL5A1 COL6A2 MSC COL27A1 TWIST2	5.46e-06	198	57	5	229588189825b1080181db9515185677b742c668
ToppCell	wk_08-11-Epithelial-Distal_epithelial_progenitor-epi-tip_intermediate\|wk_08-11 / Celltypes from embryonic and fetal-stage human lung	RAP1GAP COL27A1 EVPL ASPSCR1 PRDM16	5.46e-06	198	57	5	84697f316d9195ebe838cf57f4dbdd9feea43bec
Computational	rRNA processing and DNA repair.	TCOF1 H2AX NCL	2.50e-05	18	35	3	MODULE_392
Drug	halofuginone lactate	COL4A1 COL4A3 COL5A1 COL6A2 COL27A1 SRF ASPSCR1	1.79e-09	85	57	7	CID000062891
Drug	GK-101	COL4A1 COL4A3 COL5A1 COL6A2 COL27A1	2.92e-08	36	57	5	CID000161853
Drug	DMSe	COL4A1 COL4A3 COL5A1 FLNA COL6A2 FEZF2 COL27A1	3.90e-08	132	57	7	CID000020796
Drug	Madecassol	COL4A1 COL4A3 COL5A1 COL6A2 COL27A1	1.04e-07	46	57	5	CID000108062
Drug	d-indobufen	COL4A1 COL4A3 COL5A1 COL6A2 COL27A1	1.60e-07	50	57	5	CID000044562
Drug	ridogrel	COL4A1 COL4A3 COL5A1 COL6A2 COL27A1	1.95e-07	52	57	5	CID005362391
Drug	NSC49633	COL4A1 COL4A3 COL5A1 COL6A2 COL27A1	2.15e-07	53	57	5	CID000023340
Drug	khellin	COL4A1 COL4A3 IL11RA COL5A1 COL6A2 COL27A1 PRDM16	2.30e-07	171	57	7	CID000003828
Drug	AC1L9732	COL4A1 COL4A3 COL5A1 COL6A2 COL27A1 TWNK	4.07e-07	114	57	6	CID000439300
Drug	AC1LAKND	COL4A1 COL4A3 COL5A1 COL6A2 COL27A1	4.77e-07	62	57	5	CID000470146
Drug	BAPN	COL4A1 COL4A3 COL5A1 COL6A2 COL27A1	9.43e-07	71	57	5	CID000001647
Drug	malotilate	COL4A1 COL4A3 COL5A1 COL6A2 COL27A1	9.43e-07	71	57	5	CID000004006
Drug	AC1NMZ1B	COL4A1 COL4A3 COL5A1 COL6A2 COL27A1	1.24e-06	75	57	5	CID005034185
Drug	strontium ranelate	COL4A1 COL4A3 COL5A1 COL6A2 COL27A1	1.42e-06	77	57	5	CID006918182
Drug	4-hydroxyproline	COL4A1 COL4A3 COL5A1 COL6A2 COL27A1	3.24e-06	91	57	5	CID000000825
Drug	hyaluronan	COL4A1 COL4A3 IL11RA COL5A1 COL6A2 COL27A1 TWNK	4.09e-06	263	57	7	CID000024759
Drug	AC1L1DD6	PDIA4 COL4A1 COL4A3 COL5A1 COL6A2 COL27A1	5.65e-06	179	57	6	CID000002299
Drug	ticlopidine	COL4A1 COL4A3 COL5A1 COL6A2 COL27A1	5.97e-06	103	57	5	CID000005472
Drug	Retinoic acid [302-79-4]; Down 200; 13.4uM; HL60; HG-U133A	ZNF512B TCOF1 PLCL2 NAV3 TWNK NCL	7.04e-06	186	57	6	1548_DN
Drug	hydroxylysine	COL4A1 COL4A3 COL5A1 COL6A2 COL27A1	7.87e-06	109	57	5	CID000001029
Drug	AC1L1C2F	COL4A1 COL4A3 COL5A1 COL6A2 COL27A1	8.23e-06	110	57	5	CID000001711
Drug	PPACK	COL4A1 COL4A3 COL5A1 COL6A2 COL27A1	9.39e-06	113	57	5	CID003036757
Drug	Tranilast sodium	COL4A1 COL4A3 COL5A1 COL6A2 COL27A1	1.02e-05	115	57	5	CID000005527
Drug	Selara	COL4A1 COL4A3 COL5A1 COL6A2 COL27A1	1.53e-05	125	57	5	CID000150310
Drug	AC1Q6PCP	COL4A1 COL4A3 COL5A1 COL6A2 COL27A1 CACNA1H	2.35e-05	230	57	6	CID000005267
Drug	pirfenidone	COL4A1 COL4A3 COL5A1 COL6A2 COL27A1	2.47e-05	138	57	5	CID000040632
Drug	DL-penicillamine	COL4A1 COL4A3 COL5A1 COL6A2 COL27A1	2.56e-05	139	57	5	CID000004727
Drug	PCR 4099	COL4A1 COL4A3 COL5A1 COL6A2 COL27A1	2.56e-05	139	57	5	CID000002806
Drug	candesartan cilexetil	COL4A1 COL4A3 COL5A1 COL6A2 COL27A1	3.14e-05	145	57	5	CID000002540
Drug	Grgdsy	FEZF2 TWNK	3.68e-05	4	57	2	CID000132289
Drug	L-lysyl-L-lysyl-L-lysine	COL4A1 COL4A3 COL5A1 COL6A2 COL27A1	5.32e-05	162	57	5	CID000072363
Drug	cupric oxide	PDIA4 COL4A1 COL5A1 AHNAK H2AX NCL DDX5 KIFC1	5.88e-05	543	57	8	ctd:C030973
Drug	chondroitin sulfate	COL4A1 COL4A3 COL5A1 COL6A2 COL27A1 ADGRE4P NCL	7.43e-05	413	57	7	CID000024766
Drug	12(S)-hydroxyeicosatetraenoic acid	COL4A1 COL4A3 COL5A1 COL6A2 COL27A1	1.10e-04	189	57	5	CID000001413
Drug	foscarnet	COL4A1 COL4A3 COL5A1 COL6A2 COL27A1	1.13e-04	190	57	5	CID000003414
Drug	Gabazine [105538-73-6]; Up 200; 10.8uM; HL60; HT_HG-U133A	IL11RA EPS15L1 TCOF1 NAV3 ASPSCR1	1.25e-04	194	57	5	1316_UP
Drug	Cefadroxil [50370-12-2]; Up 200; 11uM; MCF7; HT_HG-U133A	SRF H2AX CACNA1H ASPSCR1 ZNF318	1.31e-04	196	57	5	3259_UP
Drug	Monocrotaline [315-22-0]; Up 200; 12.2uM; HL60; HG-U133A	PDIA4 MTMR12 TCOF1 RBM10 INPP5D	1.44e-04	200	57	5	1757_UP
Drug	dermatan sulfate	COL4A3 COL5A1 COL6A2 COL27A1 ADGRE4P	2.24e-04	220	57	5	CID000032756
Disease	waist-hip ratio	COL4A1 COL5A1 COL6A2 AHNAK NAV3 CDYL2 TWIST2 ASPSCR1 ZNF318 PRDM16 PHLDB2	1.62e-05	1226	56	11	EFO_0004343
Disease	myopathy (implicated_via_orthology)	COL4A1 COL4A3 FLNA	1.05e-04	48	56	3	DOID:423 (implicated_via_orthology)
Disease	mean reticulocyte volume	TBC1D16 USP8 RAP1GAP SCG3 KIAA1217 PLCL2 ZNF318 PRDM16	1.26e-04	799	56	8	EFO_0010701
Disease	Familial thoracic aortic aneurysm and aortic dissection	COL4A1 COL5A1 FLNA	1.42e-04	53	56	3	C4707243
Disease	collagen disease (implicated_via_orthology)	COL4A1 COL4A3	2.31e-04	12	56	2	DOID:854 (implicated_via_orthology)
Disease	osteoarthritis, knee	USP8 BRD2 KIAA1217 COL27A1	2.34e-04	158	56	4	EFO_0004616
Disease	Migraine Disorders	COL4A1 PRDM16	2.72e-04	13	56	2	C0149931
Disease	asthma	EPS15L1 BRD2 SCG3 SPEF2 PLCL2 PRDM16 DDX5	5.28e-04	751	56	7	MONDO_0004979
Disease	neurotic disorder	PCLO PAFAH1B1 PLCL2	9.46e-04	101	56	3	EFO_0004257
Disease	migraine disorder, diastolic blood pressure	COL4A1 PRDM16	1.03e-03	25	56	2	EFO_0006336, MONDO_0005277
Disease	cholesteryl ester 14:0 measurement	MSC NAV3	1.20e-03	27	56	2	EFO_0010340
Disease	Antihypertensive use measurement	CACNA1H ZNF318 PRDM16 PHLDB2	1.62e-03	265	56	4	EFO_0009927
Disease	HOMA-IR	KIAA1217 SPEF2	1.80e-03	33	56	2	EFO_0004501
Disease	melanoma (is_marker_for)	RAP1GAP BRD2	1.80e-03	33	56	2	DOID:1909 (is_marker_for)

Protein segments in the cluster

Peptide	Gene	Start	Entry
SPSGFGDPGKKDQKE	ERICH6	6	Q7L0X2
QSKKGFGDPFSGKDP	EPS15L1	826	Q9UBC2
PGGPSKPKKSKSGQD	ASPSCR1	276	Q9BZE9
GPKGDQGFPGTKGSL	COL4A3	706	Q01955
PKKTQTGFKGDSGGP	GZMH	191	P20718
SGVKPGFGKQLPGDK	ADGRE4P	121	Q86SQ3
KPKGKGGVTGSPEAS	AHNAK	5721	Q09666
PGFPGAKGDKGSKGE	COL4A1	1176	P02462
KGTKGPGITGTKGDP	RBM10	461	P98175
ATGSETKKSGKPGPF	PAFAH1B1	296	P43034
KFAESKGTGREKPGP	FCHO1	251	O14526
GGKDGSPKPGFLASV	IL11RA	396	Q14626
VVGGGGGTKAPKPSF	MTMR12	6	Q9C0I1
PIPAAKGKGSGGVKT	KIAA1109	3946	Q2LD37
AGPLSGKKFGNPGEK	DDX5	26	P17844
KGNQFPGGKVSSVPK	FSIP2	5851	Q5CZC0
KSGTSGVPPMAGGKK	KIFC1	116	Q9BW19
GPKAPSGGKKATQAS	H2AX	126	P16104
GQPGSPSVSKKKHGS	PCLO	4666	Q9Y6V0
AGKSSGDEGKKPPSG	NAV3	1041	Q8IVL0
SKGSQGKGSPKGSPA	EVPL	6	Q92817
GKGSPKGSPAKGSPK	EVPL	11	Q92817
GPVAKKPSSGKKGAT	TWNK	646	Q96RR1
AKAVTTPGKKGATPG	NCL	101	P19338
AGPNKGTTASKKPGN	HFM1	1126	A2PYH4
GPKPKLKGSLGTGAE	GBX1	231	Q14549
KPSKVKAFGPGLQGG	FLNA	1066	P21333
TKGSPGSDGPKGEKG	COL6A2	431	P12110
TGEAQTTGKKPAPKG	CC2D1B	56	Q5T0F9
PKGAKGSSGPTGPKG	COL5A1	1541	P20908
AKGQKGDPGLSPGKA	COL27A1	671	Q8IZC6
VGSGKGSTSPGPKGK	CACNA1H	621	O95180
GHSKLPGGSADGKPK	FEZF2	261	Q8TBJ5
AGPGPGFGFASKTKK	PIP4K2C	16	Q8TBX8
KGSPKGKSSGGKVPV	SPEF2	971	Q9C093
GKSSGGKVPVKKSPA	SPEF2	976	Q9C093
PSGPFVGKNDSKAGD	SUSD5	346	O60279
GDSKNPGDAKYGSPK	SHD	61	Q96IW2
PSTPGPKKAKGGGEA	SPATA21	21	Q7Z572
FNPGAGLPTDKKKGG	SNRPA1	181	P09661
PGKTGPAVAKAQAGK	TCOF1	391	Q13428
GGNKQPGCPKSIFSG	LIPI	231	Q6XZB0
KSAEGQPKFGGGLAP	PRDM16	641	Q9HAZ2
ISGQNFPKPKGSGAK	PLCL2	761	Q9UPR0
FPKPKGSGAKGDVVD	PLCL2	766	Q9UPR0
PGKSPTRKKSGPFGS	RAP1GAP	481	P47736
AAGGDKSQGKPKTPV	INPP5D	1096	Q92835
GSAKKSGGDFKPTSP	KIAA1217	1781	Q5T5P2
APSGDKKNPVKFEGG	PDIA4	606	P13667
GGKGFPVNPNTLKEG	PHLDB2	816	Q86SQ0
PVSGAVSGAKPGKKT	SRF	126	P11831
PPQPKKSKKASGSGG	BRD2	581	P25440
GPSGGSGTKLPKKAT	BRD2	606	P25440
PKKGYSGKPSSGGDR	CDYL2	116	Q8N8U2
EGKKGPKTPQDGFGF	TBC1D16	751	Q8TBP0
PSKGSFGGVLQKFPG	SKOR2	386	Q2VWA4
PGSPASDKTEGKKKG	ZNF512B	61	Q96KM6
DSGSGKPFKIKGQPE	USP8	596	P40818
GGKGAPETKGAPETK	ZNF318	1576	Q5VUA4
NSNPGGKTDEPKGKT	SCG3	391	Q8WXD2
EDGSPTPGKRGKKGS	TWIST2	41	Q8WVJ9
SAGGGGKKPLPAKGS	MSC	86	O60682