Cluster composition

Functions

Category	Name	IntersectionWithQuery	PValue	GenesInTerm	GenesInQuery	GenesInTermInQuery	ID
GeneOntologyMolecularFunction	histone binding	HDAC4 BRDT BAZ2A BRD4 MCM3AP MLLT10 CXXC1 PHC1 PHC2	4.84e-06	265	95	9	GO:0042393
GeneOntologyMolecularFunction	3'-5' DNA helicase activity	ERCC3 NAV2 FANCM	5.59e-05	16	95	3	GO:0043138
GeneOntologyMolecularFunction	DNA helicase activity	ERCC3 NAV2 FANCM DNA2	2.17e-04	62	95	4	GO:0003678
GeneOntologyMolecularFunction	lysine-acetylated histone binding	BRDT BAZ2A BRD4	3.86e-04	30	95	3	GO:0070577
GeneOntologyMolecularFunction	acetylation-dependent protein binding	BRDT BAZ2A BRD4	4.26e-04	31	95	3	GO:0140033
GeneOntologyMolecularFunction	chromatin binding	TRIM66 SP3 ERCC3 HDAC4 BRD4 MCM3AP FOXP1 MLLT10 FANCM PHC1 PHC2	7.66e-04	739	95	11	GO:0003682
GeneOntologyMolecularFunction	DNA-binding transcription repressor activity, RNA polymerase II-specific	SP3 HOXD9 FOXP2 ZNF382 YLPM1 FOXP1 ZFHX3	8.42e-04	320	95	7	GO:0001227
GeneOntologyMolecularFunction	RNA polymerase II-specific DNA-binding transcription factor binding	HDAC9 SP3 HDAC4 FOXP2 BAZ2A AHR FOXP1 MED13	8.44e-04	417	95	8	GO:0061629
GeneOntologyMolecularFunction	DNA-binding transcription repressor activity	SP3 HOXD9 FOXP2 ZNF382 YLPM1 FOXP1 ZFHX3	9.38e-04	326	95	7	GO:0001217
GeneOntologyMolecularFunction	helicase activity	ERCC3 NAV2 HELZ FANCM DNA2	9.51e-04	158	95	5	GO:0004386
GeneOntologyMolecularFunction	chromatin-protein adaptor activity	BRDT BAZ2A BRD4	9.75e-04	41	95	3	GO:0140463
GeneOntologyMolecularFunction	zinc ion binding	TET2 SEMG2 TRIM66 HDAC4 ZFHX4 SEC24A CIZ1 ZFHX3 UTRN CXXC1 PHC1 PHC2	1.05e-03	891	95	12	GO:0008270
GeneOntologyMolecularFunction	transcription coregulator activity	HDAC9 KMT2D HDAC4 BRDT MED9 BRD4 SUPT20HL2 MAML3 MED13	1.43e-03	562	95	9	GO:0003712
GeneOntologyMolecularFunction	DNA-binding transcription factor binding	HDAC9 SP3 HDAC4 FOXP2 BAZ2A AHR FOXP1 MED13 PASD1	1.81e-03	582	95	9	GO:0140297
GeneOntologyCellularComponent	nuclear protein-containing complex	HDAC9 KMT2D ERCC3 HDAC4 BAZ2A UBAP2L MED9 BRD4 ZNF335 MCM3AP SYNE2 PAXIP1 AHR FANCM CXXC1 MED13 PHC1 PHC2 PASD1	7.14e-06	1377	92	19	GO:0140513
GeneOntologyCellularComponent	histone methyltransferase complex	HDAC9 KMT2D ZNF335 PAXIP1 CXXC1	2.00e-05	75	92	5	GO:0035097
GeneOntologyCellularComponent	chromatin	TRIM66 SP3 PRDM10 HDAC4 ZFHX4 HOXD9 FOXP2 BRDT BAZ2A BAZ2B BRD4 AHR FOXP1 ZFHX3 SUPT20HL2 FANCM PHC1 PHC2	6.89e-05	1480	92	18	GO:0000785
GeneOntologyCellularComponent	methyltransferase complex	HDAC9 KMT2D ZNF335 PAXIP1 CXXC1	1.15e-04	108	92	5	GO:0034708
GeneOntologyCellularComponent	transcription regulator complex	HDAC9 SP3 PRDM10 ERCC3 HDAC4 MED9 AHR ZFHX3 DCP1A PASD1	2.91e-04	596	92	10	GO:0005667
GeneOntologyCellularComponent	transferase complex	HDAC9 KMT2D ERCC3 BRD4 ZNF335 PAXIP1 PARD6G SUPT20HL2 DNA2 CXXC1 MED13 PHC1 PHC2	2.96e-04	963	92	13	GO:1990234
GeneOntologyCellularComponent	transcription repressor complex	SP3 PRDM10 HDAC4 PASD1	5.92e-04	87	92	4	GO:0017053
GeneOntologyCellularComponent	MLL3/4 complex	KMT2D PAXIP1	1.23e-03	12	92	2	GO:0044666
Domain	PHD	TRIM66 KMT2D BAZ2A BAZ2B PHF3 MLLT10 CXXC1	1.05e-07	75	95	7	PF00628
Domain	Znf_PHD-finger	TRIM66 KMT2D BAZ2A BAZ2B PHF3 MLLT10 CXXC1	1.51e-07	79	95	7	IPR019787
Domain	PHD	TRIM66 KMT2D BAZ2A BAZ2B PHF3 MLLT10 CXXC1	3.45e-07	89	95	7	SM00249
Domain	Znf_PHD	TRIM66 KMT2D BAZ2A BAZ2B PHF3 MLLT10 CXXC1	4.02e-07	91	95	7	IPR001965
Domain	ZF_PHD_2	TRIM66 KMT2D BAZ2A BAZ2B PHF3 MLLT10 CXXC1	5.40e-07	95	95	7	PS50016
Domain	ZF_PHD_1	TRIM66 KMT2D BAZ2A BAZ2B PHF3 MLLT10 CXXC1	5.80e-07	96	95	7	PS01359
Domain	BROMODOMAIN_1	TRIM66 BRDT BAZ2A BAZ2B BRD4	1.17e-06	37	95	5	PS00633
Domain	Bromodomain	TRIM66 BRDT BAZ2A BAZ2B BRD4	1.35e-06	38	95	5	PF00439
Domain	BROMODOMAIN_2	TRIM66 BRDT BAZ2A BAZ2B BRD4	1.98e-06	41	95	5	PS50014
Domain	BROMO	TRIM66 BRDT BAZ2A BAZ2B BRD4	2.24e-06	42	95	5	SM00297
Domain	Bromodomain	TRIM66 BRDT BAZ2A BAZ2B BRD4	2.24e-06	42	95	5	IPR001487
Domain	-	TRIM66 BRDT BAZ2A BAZ2B BRD4	2.24e-06	42	95	5	1.20.920.10
Domain	Bromodomain_CS	BRDT BAZ2A BAZ2B BRD4	8.62e-06	26	95	4	IPR018359
Domain	Znf_FYVE_PHD	TRIM66 KMT2D BAZ2A BAZ2B PHF3 MLLT10 CXXC1	1.00e-05	147	95	7	IPR011011
Domain	BRD4_CDT	BRDT BRD4	2.56e-05	2	95	2	IPR031354
Domain	Tyr_Pase_rcpt_a/e-type	PTPRA PTPRE	2.56e-05	2	95	2	IPR016336
Domain	BRD4_CDT	BRDT BRD4	2.56e-05	2	95	2	PF17105
Domain	Hist_deacetylase_Gln_rich_N	HDAC9 HDAC4	7.65e-05	3	95	2	IPR024643
Domain	HDAC4_Gln	HDAC9 HDAC4	7.65e-05	3	95	2	PF12203
Domain	WW	STXBP4 MAGI3 PLEKHA5 UTRN	9.48e-05	47	95	4	PF00397
Domain	WW	STXBP4 MAGI3 PLEKHA5 UTRN	1.03e-04	48	95	4	SM00456
Domain	WW_DOMAIN_2	STXBP4 MAGI3 PLEKHA5 UTRN	1.31e-04	51	95	4	PS50020
Domain	WW_DOMAIN_1	STXBP4 MAGI3 PLEKHA5 UTRN	1.31e-04	51	95	4	PS01159
Domain	WW_dom	STXBP4 MAGI3 PLEKHA5 UTRN	1.41e-04	52	95	4	IPR001202
Domain	BET	BRDT BRD4	1.53e-04	4	95	2	PF17035
Domain	FOXP-CC	FOXP2 FOXP1	1.53e-04	4	95	2	PF16159
Domain	FOXP-CC	FOXP2 FOXP1	1.53e-04	4	95	2	IPR032354
Domain	NET_dom	BRDT BRD4	1.53e-04	4	95	2	IPR027353
Domain	Histone_deAcase_II_euk	HDAC9 HDAC4	1.53e-04	4	95	2	IPR017320
Domain	DDT	BAZ2A BAZ2B	1.53e-04	4	95	2	PF02791
Domain	NET	BRDT BRD4	1.53e-04	4	95	2	PS51525
Domain	Znf_C2H2_jaz	PRDM10 CIZ1 GPATCH8	1.83e-04	22	95	3	IPR022755
Domain	zf-C2H2_jaz	PRDM10 CIZ1 GPATCH8	1.83e-04	22	95	3	PF12171
Domain	DDT	BAZ2A BAZ2B	2.53e-04	5	95	2	SM00571
Domain	Znf_FCS	PHC1 PHC2	2.53e-04	5	95	2	IPR012313
Domain	WSD	BAZ2A BAZ2B	2.53e-04	5	95	2	PF15613
Domain	DDT_dom	BAZ2A BAZ2B	2.53e-04	5	95	2	IPR018501
Domain	WHIM2_dom	BAZ2A BAZ2B	2.53e-04	5	95	2	IPR028941
Domain	Zinc_finger_PHD-type_CS	TRIM66 PHF3 MLLT10 CXXC1	3.35e-04	65	95	4	IPR019786
Domain	CH	MICALL1 SYNE2 NAV2 UTRN	3.35e-04	65	95	4	SM00033
Domain	DDT	BAZ2A BAZ2B	3.79e-04	6	95	2	PS50827
Domain	ZF_FCS	PHC1 PHC2	3.79e-04	6	95	2	PS51024
Domain	ZnF_U1	ZFHX4 CIZ1 ZFHX3	4.23e-04	29	95	3	SM00451
Domain	Znf_U1	ZFHX4 CIZ1 ZFHX3	4.23e-04	29	95	3	IPR003604
Domain	Spectrin_repeat	SYNE2 UTRN PPL	4.23e-04	29	95	3	IPR002017
Domain	CH	MICALL1 SYNE2 NAV2 UTRN	4.45e-04	70	95	4	PF00307
Domain	UBA	UBAP2L UBQLN3 TNRC6C	4.69e-04	30	95	3	SM00165
Domain	-	MICALL1 SYNE2 NAV2 UTRN	4.70e-04	71	95	4	1.10.418.10
Domain	CH	MICALL1 SYNE2 NAV2 UTRN	5.23e-04	73	95	4	PS50021
Domain	Spectrin/alpha-actinin	SYNE2 UTRN PPL	5.68e-04	32	95	3	IPR018159
Domain	SPEC	SYNE2 UTRN PPL	5.68e-04	32	95	3	SM00150
Domain	CH-domain	MICALL1 SYNE2 NAV2 UTRN	5.79e-04	75	95	4	IPR001715
Domain	ResIII	ERCC3 FANCM	7.03e-04	8	95	2	PF04851
Domain	-	BAZ2A BAZ2B	7.03e-04	8	95	2	3.30.890.10
Domain	Helicase/UvrB_N	ERCC3 FANCM	7.03e-04	8	95	2	IPR006935
Domain	UBA	UBAP2L UBQLN3 TNRC6C	8.06e-04	36	95	3	PF00627
Domain	Hist_deacetyl	HDAC9 HDAC4	1.37e-03	11	95	2	PF00850
Domain	Methyl_CpG_DNA-bd	BAZ2A BAZ2B	1.37e-03	11	95	2	IPR001739
Domain	MBD	BAZ2A BAZ2B	1.37e-03	11	95	2	PF01429
Domain	DNA-bd_dom	BAZ2A BAZ2B	1.37e-03	11	95	2	IPR016177
Domain	His_deacetylse_dom	HDAC9 HDAC4	1.37e-03	11	95	2	IPR023801
Domain	-	HDAC9 HDAC4	1.37e-03	11	95	2	3.40.800.20
Domain	His_deacetylse	HDAC9 HDAC4	1.37e-03	11	95	2	IPR000286
Domain	MBD	BAZ2A BAZ2B	1.37e-03	11	95	2	SM00391
Domain	MBD	BAZ2A BAZ2B	1.37e-03	11	95	2	PS50982
Domain	UBA	UBAP2L UBQLN3 TNRC6C	1.45e-03	44	95	3	IPR015940
Domain	UBA	UBAP2L UBQLN3 TNRC6C	1.76e-03	47	95	3	PS50030
Domain	ZINC_FINGER_C2H2_1	SP3 ZNF23 PRDM10 ZFHX4 FOXP2 ZNF382 ZNF335 CIZ1 FOXP1 ZFHX3 GPATCH8	1.95e-03	777	95	11	PS00028
Domain	-	TRIM66 KMT2D BAZ2A BAZ2B PHF3 MLLT10 CXXC1 RFWD3	2.05e-03	449	95	8	3.30.40.10
Domain	Znf_RING/FYVE/PHD	TRIM66 KMT2D BAZ2A BAZ2B PHF3 MLLT10 CXXC1 RFWD3	2.35e-03	459	95	8	IPR013083
Domain	Znf_C2H2-like	SP3 ZNF23 PRDM10 ZFHX4 FOXP2 ZNF382 ZNF335 CIZ1 FOXP1 ZFHX3 GPATCH8	2.36e-03	796	95	11	IPR015880
Domain	Znf_C2H2	SP3 ZNF23 PRDM10 ZFHX4 FOXP2 ZNF382 ZNF335 CIZ1 FOXP1 ZFHX3 GPATCH8	2.57e-03	805	95	11	IPR007087
Domain	ZnF_C2H2	SP3 ZNF23 PRDM10 ZFHX4 FOXP2 ZNF382 ZNF335 CIZ1 FOXP1 ZFHX3 GPATCH8	2.64e-03	808	95	11	SM00355
Domain	RmlC_Cupin	FOXP2 CIZ1	2.93e-03	16	95	2	IPR011051
Domain	UBA-like	UBAP2L UBQLN3 TNRC6C	4.24e-03	64	95	3	IPR009060
Domain	SAM_1	KAZN PHC1 PHC2	5.03e-03	68	95	3	PF00536
Domain	TIR	TLR10 TLR8	5.05e-03	21	95	2	SM00255
Pubmed	A central chaperone-like role for 14-3-3 proteins in human cells.	MICALL1 TET2 FSIP2 HDAC4 PHF3 PRRC2C SEC24A STXBP4 BRD4 SYNE2 AAK1 NAV2 MAGI3 HELZ PLEKHA5 FAM117B MTCL1 TTK UTRN DENND4C DCP1A	1.98e-14	861	96	21	36931259
Pubmed	Large-scale characterization of HeLa cell nuclear phosphoproteins.	MICALL1 KMT2D PPAN BAZ2A UBAP2L PHF3 BRD4 ZNF335 YLPM1 AAK1 HELZ GPATCH8 MED13 PPL PHC2 DCP1A	3.93e-10	774	96	16	15302935
Pubmed	Human transcription factor protein interaction networks.	TET2 KMT2D PPAN ZFHX4 FOXP2 UBAP2L PRRC2C SEC24A SYNE2 YLPM1 PAXIP1 HELZ FOXP1 ZFHX3 TNRC6C GPATCH8 MLLT10 CXXC1 DCP1A	1.12e-08	1429	96	19	35140242
Pubmed	Proximity-dependent biotin identification (BioID) reveals a dynamic LSD1-CoREST interactome during embryonic stem cell differentiation.	TET2 KMT2D ZFHX4 BRD4 PLEKHA5 FOXP1 ZFHX3 UTRN DENND4C PHC1 DCP1A	2.34e-08	418	96	11	34709266
Pubmed	Proximity biotinylation and affinity purification are complementary approaches for the interactome mapping of chromatin-associated protein complexes.	ERCC3 NCAPG UBAP2L ZC3H15 MED9 CIZ1 PAXIP1 KIF4A UTRN MED13 DENND4C PHC1 PHC2	2.69e-08	645	96	13	25281560
Pubmed	SRCAP complex promotes lung cancer progression by reprograming the oncogenic transcription of Hippo-YAP/TAZ signaling pathway.	KMT2D NCAPG BAZ2A UBAP2L PHF3 PRRC2C BRD4 YLPM1 CIZ1 KIF4A PLEKHA5 DCP1A	3.99e-08	549	96	12	38280479
Pubmed	Proximity-dependent Mapping of the Androgen Receptor Identifies Kruppel-like Factor 4 as a Functional Partner.	TET2 KMT2D PHF3 BRD4 YLPM1 PAXIP1 KIF4A FOXP1 MED13	6.05e-08	268	96	9	33640491
Pubmed	The Epigenetic Factor Landscape of Developing Neocortex Is Regulated by Transcription Factors Pax6→ Tbr2→ Tbr1.	HDAC9 KMT2D HDAC4 BAZ2A BAZ2B PHC1 PHC2	2.84e-07	157	96	7	30186101
Pubmed	Resolution of cell fate decisions revealed by single-cell gene expression analysis from zygote to blastocyst.	SP3 FOXP2 BRDT BAZ2A ZC3H15 BRD4 CIZ1 AHR FOXP1 ZFHX3 MLLT10 CXXC1 PHC1	3.58e-07	808	96	13	20412781
Pubmed	Prediction of the coding sequences of unidentified human genes. XVIII. The complete sequences of 100 new cDNA clones from brain which code for large proteins in vitro.	ANKRD36B TET2 MAGI3 ANKRD36 TNRC6C FANCM	3.87e-07	101	96	6	10997877
Pubmed	Systematic bromodomain protein screens identify homologous recombination and R-loop suppression pathways involved in genome integrity.	TRIM66 ZFHX4 FOXP2 BRDT PHLDA1 BAZ2A ZC3H15 BRD4 MCM3AP CIZ1 AHR HELZ FOXP1 ZFHX3 DNA2	4.13e-07	1116	96	15	31753913
Pubmed	cDNAs with long CAG trinucleotide repeats from human brain.	KMT2D FOXP2 PAXIP1 MAML3	4.64e-07	23	96	4	9225980
Pubmed	H4K20me0 recognition by BRCA1-BARD1 directs homologous recombination to sister chromatids.	KMT2D HOXD9 BAZ2A BAZ2B PHF3 MED9 BRD4 YLPM1 CIZ1 PAXIP1 KIF4A GPATCH8 FANCM CXXC1 RFWD3 PHC2	4.94e-07	1294	96	16	30804502
Pubmed	Interaction network of human early embryonic transcription factors.	TET2 KMT2D HDAC4 ZFHX4 FOXP2 MCM3AP PAXIP1 FOXP1 ZFHX3	5.88e-07	351	96	9	38297188
Pubmed	Transcription factor Foxp3 and its protein partners form a complex regulatory network.	ERCC3 NCAPG PHF3 AAK1 KIF4A HELZ FOXP1 MLLT10 PHC2	9.10e-07	370	96	9	22922362
Pubmed	A probability-based approach for high-throughput protein phosphorylation analysis and site localization.	PPAN UBAP2L PHF3 MYPN AAK1 NAV2 KIF4A PLEKHA5 MTCL1 DENND4C	1.36e-06	503	96	10	16964243
Pubmed	Protein-protein interactions between large proteins: two-hybrid screening using a functionally classified library composed of long cDNAs.	TET2 HDAC4 UBAP2L MCM3AP MAGI3 MED13	1.71e-06	130	96	6	12421765
Pubmed	Screen identifies bromodomain protein ZMYND8 in chromatin recognition of transcription-associated DNA damage that promotes homologous recombination.	TRIM66 BRDT BAZ2A BAZ2B BRD4	2.14e-06	75	96	5	25593309
Pubmed	The RNA-mediated estrogen receptor α interactome of hormone-dependent human breast cancer cell nuclei.	SP3 PPAN ERCC3 BAZ2A PHF3 ZC3H15 AAK1 CIZ1 KIF4A ADGRG1 HELZ ZFHX3 GPATCH8 UTRN MED13 PHC2	3.28e-06	1497	96	16	31527615
Pubmed	E-cadherin interactome complexity and robustness resolved by quantitative proteomics.	MICALL1 ZC3H15 AAK1 NAV2 MAGI3 PLEKHA5 TTK UTRN DENND4C PPL	3.82e-06	565	96	10	25468996
Pubmed	A genome-wide screen to identify transcription factors expressed in pelvic Ganglia of the lower urinary tract.	SP3 ZNF23 FOXP2 BAZ2A BRD4 AHR ZFHX3 MLLT10 MAML3 PHC1 DCP1A	4.29e-06	709	96	11	22988430
Pubmed	Comparative Application of BioID and TurboID for Protein-Proximity Biotinylation.	KMT2D HDAC4 PRRC2C SEC24A MCM3AP YLPM1 HELZ GPATCH8 MAML3	5.10e-06	457	96	9	32344865
Pubmed	A deep proteomics perspective on CRM1-mediated nuclear export and nucleocytoplasmic partitioning.	UBAP2L ZC3H15 SEC24A MCM3AP MYPN AAK1 PAXIP1 AHR PLEKHA5 TNRC6C DENND4C RFWD3 DCP1A	5.66e-06	1038	96	13	26673895
Pubmed	Differential and Overlapping Pattern of Foxp1 and Foxp2 Expression in the Striatum of Adult Mouse Brain.	FOXP2 FOXP1	7.54e-06	2	96	2	30031127
Pubmed	Discovery and characterization of bromodomain 2-specific inhibitors of BRDT.	BRDT BRD4	7.54e-06	2	96	2	33637650
Pubmed	Kazrin, a novel periplakin-interacting protein associated with desmosomes and the keratinocyte plasma membrane.	KAZN PPL	7.54e-06	2	96	2	15337775
Pubmed	Novel Mutations and Decreased Expression of the Epigenetic Regulator TET2 in Pulmonary Arterial Hypertension.	TET2 COMMD10	7.54e-06	2	96	2	32192357
Pubmed	Tet2 restrains inflammatory gene expression in macrophages.	TET2 COMMD10	7.54e-06	2	96	2	28826859
Pubmed	Foxp2 regulates anatomical features that may be relevant for vocal behaviors and bipedal locomotion.	FOXP2 FOXP1	7.54e-06	2	96	2	30104377
Pubmed	Protein tyrosine phosphatase alpha inhibits hypothalamic leptin receptor signaling and regulates body weight in vivo.	PTPRA PTPRE	7.54e-06	2	96	2	30615487
Pubmed	Conditional deletion of Ahr alters gene expression profiles in hematopoietic stem cells.	AHR COMMD10	7.54e-06	2	96	2	30388136
Pubmed	Genome-Wide Transcriptional Analysis Reveals Novel AhR Targets That Regulate Dendritic Cell Function during Influenza A Virus Infection.	AHR COMMD10	7.54e-06	2	96	2	31356168
Pubmed	Association of clonal hematopoiesis with chronic obstructive pulmonary disease.	TET2 COMMD10	7.54e-06	2	96	2	34855941
Pubmed	The mouse ZFH-4 protein contains four homeodomains and twenty-two zinc fingers.	ZFHX4 ZFHX3	7.54e-06	2	96	2	10873665
Pubmed	Investigating protein-protein interactions in live cells using bioluminescence resonance energy transfer.	FOXP2 FOXP1	7.54e-06	2	96	2	24893771
Pubmed	Protein tyrosine phosphatases ε and α perform nonredundant roles in osteoclasts.	PTPRA PTPRE	7.54e-06	2	96	2	24694598
Pubmed	Tyrosine phosphatases epsilon and alpha perform specific and overlapping functions in regulation of voltage-gated potassium channels in Schwann cells.	PTPRA PTPRE	7.54e-06	2	96	2	16870705
Pubmed	Parallel FoxP1 and FoxP2 expression in songbird and human brain predicts functional interaction.	FOXP2 FOXP1	7.54e-06	2	96	2	15056695
Pubmed	KMT2D regulates activation, localization, and integrin expression by T-cells.	KMT2D COMMD10	7.54e-06	2	96	2	38765012
Pubmed	A de novo FOXP1 variant in a patient with autism, intellectual disability and severe speech and language impairment.	FOXP2 FOXP1	7.54e-06	2	96	2	25853299
Pubmed	FOXP2-positive diffuse large B-cell lymphomas exhibit a poor response to R-CHOP therapy and distinct biological signatures.	FOXP2 FOXP1	7.54e-06	2	96	2	27224915
Pubmed	Characterization of a new subfamily of winged-helix/forkhead (Fox) genes that are expressed in the lung and act as transcriptional repressors.	FOXP2 FOXP1	7.54e-06	2	96	2	11358962
Pubmed	Equivalent missense variant in the FOXP2 and FOXP1 transcription factors causes distinct neurodevelopmental disorders.	FOXP2 FOXP1	7.54e-06	2	96	2	28741757
Pubmed	Compensation between FOXP transcription factors maintains proper striatal function.	FOXP2 FOXP1	7.54e-06	2	96	2	38761373
Pubmed	Somatic mutations in KMT2D and TET2 associated with worse prognosis in Epstein-Barr virus-associated T or natural killer-cell lymphoproliferative disorders.	TET2 KMT2D	7.54e-06	2	96	2	31311407
Pubmed	Identification and functional characterization of de novo FOXP1 variants provides novel insights into the etiology of neurodevelopmental disorder.	FOXP2 FOXP1	7.54e-06	2	96	2	26647308
Pubmed	Prediction of the coding sequences of mouse homologues of KIAA gene: IV. The complete nucleotide sequences of 500 mouse KIAA-homologous cDNAs identified by screening of terminal sequences of cDNA clones randomly sampled from size-fractionated libraries.	HDAC9 TRIM66 USF3 BAZ2B MAGI3 TOGARAM1 KAZN FANCM MAML3	9.35e-06	493	96	9	15368895
Pubmed	NuRD subunit CHD4 regulates super-enhancer accessibility in rhabdomyosarcoma and represents a general tumor dependency.	ZFHX4 BAZ2A BRD4 ZFHX3 GPATCH8	1.02e-05	103	96	5	32744500
Pubmed	N-Terminal Acetyltransferase Naa40p Whereabouts Put into N-Terminal Proteoform Perspective.	BAZ2A UBAP2L ZC3H15 PRRC2C STXBP4 YLPM1 AAK1 CIZ1 KIF4A HELZ UTRN DCP1A	1.04e-05	934	96	12	33916271
Pubmed	Functional proteomics establishes the interaction of SIRT7 with chromatin remodeling complexes and expands its role in regulation of RNA polymerase I transcription.	BAZ2A UBAP2L PHF3 PRRC2C MCM3AP SYNE2 YLPM1 KIF4A HELZ UTRN	1.35e-05	653	96	10	22586326
Pubmed	Spatiotemporal profile of postsynaptic interactomes integrates components of complex brain disorders.	CACNA1A KIF21B HDAC4 FOXP2 UBAP2L PRRC2C SYNE2 YLPM1 AAK1 KIF4A PLEKHA5 MTCL1	1.40e-05	963	96	12	28671696
Pubmed	Identification and functional characterization of transcriptional activators in human cells.	TET2 KMT2D ZFHX4 BRD4 SYNE2 CIZ1 PAXIP1 FOXP1	1.51e-05	398	96	8	35016035
Pubmed	Spatiotemporal-resolved protein networks profiling with photoactivation dependent proximity labeling.	FSIP2 UBAP2L PRRC2C BRD4 YLPM1 FOXP1 GPATCH8 DCP1A	1.54e-05	399	96	8	35987950
Pubmed	Prediction of the coding sequences of mouse homologues of KIAA gene: II. The complete nucleotide sequences of 400 mouse KIAA-homologous cDNAs identified by screening of terminal sequences of cDNA clones randomly sampled from size-fractionated libraries.	BAZ2A UBAP2L PHF3 PRRC2C MCM3AP MTCL1 TNRC6C GPATCH8	1.77e-05	407	96	8	12693553
Pubmed	Oct4 links multiple epigenetic pathways to the pluripotency network.	UBAP2L PHF3 BRD4 KIF4A HELZ MLLT10	2.20e-05	203	96	6	22083510
Pubmed	The histone demethylase Kdm6b regulates subtype diversification of mouse spinal motor neurons during development.	ZFHX4 FOXP1 ZFHX3	2.25e-05	20	96	3	35177643
Pubmed	Mammalian Polycomb Scmh1 mediates exclusion of Polycomb complexes from the XY body in the pachytene spermatocytes.	PHC1 PHC2	2.26e-05	3	96	2	17215307
Pubmed	Foxp4: a novel member of the Foxp subfamily of winged-helix genes co-expressed with Foxp1 and Foxp2 in pulmonary and gut tissues.	FOXP2 FOXP1	2.26e-05	3	96	2	14516685
Pubmed	The co-existence of transcriptional activator and transcriptional repressor MEF2 complexes influences tumor aggressiveness.	HDAC9 HDAC4	2.26e-05	3	96	2	28419090
Pubmed	Pluripotency transcription factors and Tet1/2 maintain Brd4-independent stem cell identity.	TET2 BRD4	2.26e-05	3	96	2	29662175
Pubmed	HDAC1, HDAC4, and HDAC9 Bind to PC3/Tis21/Btg2 and Are Required for Its Inhibition of Cell Cycle Progression and Cyclin D1 Expression.	HDAC9 HDAC4	2.26e-05	3	96	2	27333946
Pubmed	AHR/TET2/NT5E axis downregulation is associated with the risk of systemic lupus erythematosus and its progression.	TET2 AHR	2.26e-05	3	96	2	36314527
Pubmed	Increased expression of hepcidin and toll-like receptors 8 and 10 in viral keratitis.	TLR10 TLR8	2.26e-05	3	96	2	21499082
Pubmed	Aryl hydrocarbon receptor signaling modulates antiviral immune responses: ligand metabolism rather than chemical source is the stronger predictor of outcome.	AHR COMMD10	2.26e-05	3	96	2	29379138
Pubmed	Human-specific transcriptional regulation of CNS development genes by FOXP2.	FOXP2 FOXP1	2.26e-05	3	96	2	19907493
Pubmed	Structural basis of molecular recognition of helical histone H3 tail by PHD finger domains.	BAZ2A BAZ2B	2.26e-05	3	96	2	28341809
Pubmed	Protein-Protein Interaction Among the FoxP Family Members and their Regulation of Two Target Genes, VLDLR and CNTNAP2 in the Zebra Finch Song System.	FOXP2 FOXP1	2.26e-05	3	96	2	28507505
Pubmed	Dephosphorylation at a conserved SP motif governs cAMP sensitivity and nuclear localization of class IIa histone deacetylases.	HDAC9 HDAC4	2.26e-05	3	96	2	23297420
Pubmed	Characterization of Foxp2 and Foxp1 mRNA and protein in the developing and mature brain.	FOXP2 FOXP1	2.26e-05	3	96	2	12687690
Pubmed	HDAC4 deacetylase associates with and represses the MEF2 transcription factor.	HDAC9 HDAC4	2.26e-05	3	96	2	10487761
Pubmed	Microbial signals drive pre-leukaemic myeloproliferation in a Tet2-deficient host.	TET2 COMMD10	2.26e-05	3	96	2	29769727
Pubmed	DNA hypermethylation is associated with invasive phenotype of malignant melanoma.	TET2 NAV2	2.26e-05	3	96	2	31602702
Pubmed	The mutational landscape of cutaneous T cell lymphoma and Sézary syndrome.	TET2 KMT2D	2.26e-05	3	96	2	26551667
Pubmed	Transcriptional regulation by FOXP1, FOXP2, and FOXP4 dimerization.	FOXP2 FOXP1	2.26e-05	3	96	2	25027557
Pubmed	Tyrosine phosphatase-epsilon activates Src and supports the transformed phenotype of Neu-induced mammary tumor cells.	PTPRA PTPRE	2.26e-05	3	96	2	12598528
Pubmed	Protein-tyrosine phosphatase alpha acts as an upstream regulator of Fyn signaling to promote oligodendrocyte differentiation and myelination.	PTPRA PTPRE	2.26e-05	3	96	2	19812040
Pubmed	Different class IIa HDACs repressive complexes regulate specific epigenetic responses related to cell survival in leiomyosarcoma cells.	HDAC9 HDAC4	2.26e-05	3	96	2	31754707
Pubmed	Foxp1 expression is essential for sex-specific murine neonatal ultrasonic vocalization.	FOXP2 FOXP1	2.26e-05	3	96	2	28204507
Pubmed	Identification and characterization of interactions between the vertebrate polycomb-group protein BMI1 and human homologs of polyhomeotic.	PHC1 PHC2	2.26e-05	3	96	2	9121482
Pubmed	Characterization of BRD4 during mammalian postmeiotic sperm development.	BRDT BRD4	2.26e-05	3	96	2	25691659
Pubmed	Interactomes of Glycogen Synthase Kinase-3 Isoforms.	MYPN PLEKHA5 MTCL1 UTRN DENND4C DCP1A	2.59e-05	209	96	6	36779422
Pubmed	Phosphoproteome analysis of the human mitotic spindle.	PPAN NCAPG KIF4A MTCL1 GPATCH8 PPL	2.66e-05	210	96	6	16565220
Pubmed	BioID-based intact cell interactome of the Kv1.3 potassium channel identifies a Kv1.3-STAT3-p53 cellular signaling pathway.	MICALL1 UBAP2L ZC3H15 PRRC2C SEC24A AAK1 MAGI3 PLEKHA5 TTK DENND4C	2.68e-05	708	96	10	39231216
Pubmed	Structural basis for activity regulation of MLL family methyltransferases.	KMT2D PAXIP1 CXXC1	3.02e-05	22	96	3	26886794
Pubmed	A Degradation Motif in STAU1 Defines a Novel Family of Proteins Involved in Inflammation.	MICALL1 ERCC3 UBAP2L PHF3 ZC3H15 PRRC2C YLPM1 AAK1 HELZ TTK	3.24e-05	724	96	10	36232890
Pubmed	PRC1 and PRC2 are not required for targeting of H2A.Z to developmental genes in embryonic stem cells.	KMT2D PAXIP1 PHC1 PHC2	3.24e-05	65	96	4	22496869
Pubmed	Construction of expression-ready cDNA clones for KIAA genes: manual curation of 330 KIAA cDNA clones.	PHF3 SYNE2 NAV2 TOGARAM1 PLEKHA5 TNRC6C	3.91e-05	225	96	6	12168954
Pubmed	Genetic interaction mapping in mammalian cells using CRISPR interference.	KMT2D CXXC1 PHC1 PHC2	4.11e-05	69	96	4	28481362
Pubmed	A census of human transcription factors: function, expression and evolution.	SP3 ZNF23 KMT2D USF3 ZFHX4 HOXD9 FOXP2 ZC3H15 ZNF335 FOXP1 ZFHX3	4.23e-05	908	96	11	19274049
Pubmed	Transcriptional and DNA binding activity of the Foxp1/2/4 family is modulated by heterotypic and homotypic protein interactions.	FOXP2 FOXP1	4.51e-05	4	96	2	14701752
Pubmed	The aryl hydrocarbon receptor regulates lipid mediator production in alveolar macrophages.	AHR COMMD10	4.51e-05	4	96	2	37081886
Pubmed	Behavioral abnormalities observed in Zfhx2-deficient mice.	ZFHX4 ZFHX3	4.51e-05	4	96	2	23300874
Pubmed	Proximal Lck Promoter-Driven Cre Function Is Limited in Neonatal and Ineffective in Adult γδ T Cell Development.	AHR COMMD10	4.51e-05	4	96	2	31167772
Pubmed	Expression of BET genes in testis of men with different spermatogenic impairments.	BRDT BRD4	4.51e-05	4	96	2	22035730
Pubmed	Distinct and opposite effects of leukemogenic Idh and Tet2 mutations in hematopoietic stem and progenitor cells.	TET2 COMMD10	4.51e-05	4	96	2	36652477
Pubmed	A role for nucleoprotein Zap3 in the reduction of telomerase activity during embryonic stem cell differentiation.	SP3 YLPM1	4.51e-05	4	96	2	15511642
Pubmed	TRAF6 functions as a tumor suppressor in myeloid malignancies by directly targeting MYC oncogenic activity.	TET2 COMMD10	4.51e-05	4	96	2	35045331
Pubmed	HOXA9 Reprograms the Enhancer Landscape to Promote Leukemogenesis.	KMT2D PAXIP1	4.51e-05	4	96	2	30270123
Pubmed	Extrinsic Regulators of mRNA Translation in Developing Brain: Story of WNTs.	FOXP2 FOXP1	4.51e-05	4	96	2	33525513
Pubmed	HDAC4, a human histone deacetylase related to yeast HDA1, is a transcriptional corepressor.	HDAC9 HDAC4	4.51e-05	4	96	2	10523670
Interaction	PHIP interactions	TRIM66 HDAC4 ZFHX4 FOXP2 BRD4 MCM3AP CIZ1 HELZ FOXP1 ZFHX3	3.11e-08	197	95	10	int:PHIP
Interaction	YWHAH interactions	MICALL1 KIF21B TET2 HDAC4 PHF3 PRRC2C SEC24A STXBP4 BRD4 SYNE2 AAK1 NAV2 PARD6G MAGI3 PLEKHA5 FAM117B MTCL1 TTK UTRN DENND4C DCP1A	3.28e-08	1102	95	21	int:YWHAH
Interaction	TBR1 interactions	TET2 KMT2D ZFHX4 FOXP2 BRDT BRD4 PAXIP1 ZFHX3	6.16e-08	113	95	8	int:TBR1
Interaction	FOXP3 interactions	HDAC9 SEMG2 ERCC3 NCAPG HDAC4 FOXP2 PHF3 AAK1 KIF4A HELZ FOXP1 MLLT10 PHC2	1.19e-07	432	95	13	int:FOXP3
Interaction	SMG7 interactions	TRIM66 KMT2D UBAP2L YLPM1 PAXIP1 HELZ TNRC6C GPATCH8 MLLT10 DNA2 DCP1A	3.15e-07	319	95	11	int:SMG7
Interaction	FEV interactions	KMT2D ZFHX4 FOXP2 PAXIP1 FOXP1 ZFHX3 GPATCH8 MLLT10 CXXC1	4.97e-07	203	95	9	int:FEV
Interaction	YWHAG interactions	MICALL1 KIF21B TET2 HDAC4 PHF3 PRRC2C SEC24A STXBP4 SYNE2 AAK1 NAV2 MAGI3 HELZ PLEKHA5 FAM117B MTCL1 TTK UTRN DENND4C DCP1A	1.17e-06	1248	95	20	int:YWHAG
Interaction	EGR2 interactions	TET2 KMT2D HDAC4 ZFHX4 FOXP2 PAXIP1 FOXP1 ZFHX3	1.48e-06	171	95	8	int:EGR2
Interaction	GSC interactions	KMT2D ZFHX4 FOXP2 PAXIP1 FOXP1 ZFHX3	3.47e-06	87	95	6	int:GSC
Interaction	ERG interactions	TET2 KMT2D ZFHX4 BRD4 PAXIP1 FOXP1 MLLT10 TARBP1	1.05e-05	223	95	8	int:ERG
Interaction	TLE3 interactions	TET2 KMT2D BAZ2B SEC24A BRD4 MCM3AP HELZ ZFHX3 GPATCH8 MLLT10	1.12e-05	376	95	10	int:TLE3
Interaction	GCM1 interactions	TET2 KMT2D HDAC4 PAXIP1 FOXP1	1.73e-05	68	95	5	int:GCM1
Interaction	CRX interactions	TET2 SP3 KMT2D ZFHX4 FOXP2 PAXIP1 FOXP1 ZFHX3	2.69e-05	254	95	8	int:CRX
Interaction	HNF1B interactions	TET2 KMT2D ZFHX4 PAXIP1 FOXP1 ZFHX3 MLLT10	3.25e-05	190	95	7	int:HNF1B
Interaction	PHF21A interactions	SP3 KMT2D ZFHX4 BRD4 PLEKHA5 ZFHX3 UTRN DENND4C DCP1A	3.51e-05	343	95	9	int:PHF21A
Interaction	PLEC interactions	TET2 NCAPG BRD4 MCM3AP SYNE2 AAK1 PLEKHA5 KAZN FANCM DNA2	3.54e-05	430	95	10	int:PLEC
Interaction	ERCC2 interactions	TRIM66 ERCC3 BRDT BRD4 DNA2	4.04e-05	81	95	5	int:ERCC2
Interaction	SOX7 interactions	TET2 KMT2D ZFHX4 PAXIP1 FOXP1	4.29e-05	82	95	5	int:SOX7
Interaction	TNRC6C interactions	UBAP2L SEC24A HELZ TNRC6C TTK DCP1A	4.87e-05	138	95	6	int:TNRC6C
Interaction	MED4 interactions	KIF21B ERCC3 NCAPG UBAP2L ZC3H15 MED9 BRD4 UTRN MED13 DENND4C	5.18e-05	450	95	10	int:MED4
Interaction	CELF1 interactions	UBAP2L PRRC2C BRD4 YLPM1 CIZ1 HELZ TNRC6C GPATCH8	6.55e-05	288	95	8	int:CELF1
Interaction	FOXI1 interactions	KMT2D ZFHX4 PAXIP1 FOXP1 MLLT10	7.45e-05	92	95	5	int:FOXI1
Interaction	SFN interactions	TET2 HDAC9 HDAC4 PHF3 PRRC2C STXBP4 AAK1 NAV2 PLEKHA5 FAM117B DENND4C DCP1A	9.85e-05	692	95	12	int:SFN
Interaction	CCT8L2 interactions	ZFHX4 STXBP4 MCM3AP CIZ1 HELZ CXXC1	9.97e-05	157	95	6	int:CCT8L2
Interaction	EGLN3 interactions	TET2 ERCC3 NCAPG UBAP2L PHF3 SEC24A STXBP4 BRD4 AHR HELZ PLEKHA5 MTCL1 GPATCH8 TTK UTRN TARBP1 DCP1A	1.06e-04	1296	95	17	int:EGLN3
Interaction	RCOR1 interactions	TRIM66 KMT2D NCAPG ZFHX4 BRD4 PLEKHA5 ZFHX3 UTRN DENND4C DCP1A	1.12e-04	494	95	10	int:RCOR1
Interaction	ZBTB21 interactions	MICALL1 HDAC4 BRD4 PLEKHA5 DENND4C DCP1A	1.14e-04	161	95	6	int:ZBTB21
Interaction	SOX5 interactions	KMT2D ZFHX4 FOXP2 PRRC2C FOXP1 ZFHX3	1.18e-04	162	95	6	int:SOX5
Interaction	SCMH1 interactions	BRD4 MAML3 PHC1 PHC2	1.22e-04	54	95	4	int:SCMH1
Interaction	YWHAZ interactions	MICALL1 TET2 HDAC9 FSIP2 PTPRA HDAC4 PHF3 SEC24A BRD4 SYNE2 AAK1 NAV2 PARD6G PLEKHA5 FAM117B DENND4C DCP1A	1.32e-04	1319	95	17	int:YWHAZ
Interaction	GARRE1 interactions	TRIM66 UBAP2L STXBP4 HELZ TNRC6C DCP1A	1.40e-04	167	95	6	int:GARRE1
Interaction	S100A2 interactions	KMT2D ERCC3 NCAPG FOXP2 MCM3AP PAXIP1 AHR FAM117B TTK	1.42e-04	412	95	9	int:S100A2
Interaction	NUP35 interactions	KMT2D HDAC4 PRRC2C SEC24A MCM3AP YLPM1 HELZ GPATCH8 MAML3	1.77e-04	424	95	9	int:NUP35
Interaction	PAX8 interactions	TET2 KMT2D ZFHX4 PAXIP1 FOXP1	1.81e-04	111	95	5	int:PAX8
Interaction	PTPN14 interactions	TRIM66 PTPRE HDAC4 STXBP4 MAGI3 DENND4C	1.92e-04	177	95	6	int:PTPN14
Interaction	GIGYF1 interactions	TRIM66 HDAC4 UBAP2L PLEKHA5 TNRC6C DENND4C	1.92e-04	177	95	6	int:GIGYF1
Interaction	HDAC1 interactions	TET2 HDAC9 SP3 KMT2D NCAPG ZFHX4 BAZ2A BRD4 SYNE2 KIF4A PLEKHA5 ZFHX3 UTRN DENND4C DCP1A	2.03e-04	1108	95	15	int:HDAC1
Interaction	AR interactions	TET2 KMT2D ERCC3 HDAC4 UBAP2L PHF3 BRD4 YLPM1 PAXIP1 AHR KIF4A FOXP1 ZFHX3 MED13	2.21e-04	992	95	14	int:AR
Interaction	ALG13 interactions	TRIM66 KMT2D UBAP2L PRRC2C HELZ GPATCH8	2.30e-04	183	95	6	int:ALG13
Interaction	H2BC9 interactions	FSIP2 USF3 ZFHX4 BAZ2B BRD4 YLPM1 ANKRD36 GPATCH8 MAML3	2.57e-04	446	95	9	int:H2BC9
Interaction	CTNNB1 interactions	KMT2D PTPRA HDAC4 MED9 BRD4 SYNE2 USP29 AHR MAGI3 PLEKHA5 FOXP1 FAM117B MLLT10 UTRN	2.63e-04	1009	95	14	int:CTNNB1
Interaction	VSX1 interactions	ZFHX4 FOXP1 ZFHX3 USP9Y	2.67e-04	66	95	4	int:VSX1
Interaction	FAM120C interactions	TRIM66 HDAC4 UBAP2L PRRC2C HELZ TNRC6C	2.89e-04	191	95	6	int:FAM120C
Interaction	PAX7 interactions	KMT2D ZFHX4 PAXIP1 FOXP1 ZFHX3	3.03e-04	124	95	5	int:PAX7
Interaction	KLF5 interactions	TET2 KMT2D BRD4 PAXIP1 FOXP1 MLLT10	3.23e-04	195	95	6	int:KLF5
Interaction	FOXL1 interactions	KMT2D NCAPG ZFHX4 PAXIP1 FOXP1 ZFHX3	3.32e-04	196	95	6	int:FOXL1
Interaction	TNRC6A interactions	TRIM66 UBAP2L HELZ TNRC6C FANCM MED13 DCP1A	3.61e-04	280	95	7	int:TNRC6A
Interaction	PAX9 interactions	KMT2D ZFHX4 PAXIP1 FOXP1 ZFHX3	3.77e-04	130	95	5	int:PAX9
Interaction	ZFHX4 interactions	ZFHX4 FOXP2 FOXP1 ZFHX3	3.93e-04	73	95	4	int:ZFHX4
Interaction	POU5F1 interactions	BRDT UBAP2L PHF3 BRD4 PAXIP1 KIF4A HELZ ZFHX3 MLLT10 PHC1	4.29e-04	584	95	10	int:POU5F1
Interaction	MAPKAPK2 interactions	PHF3 PRRC2C YLPM1 PHC1 PHC2	4.33e-04	134	95	5	int:MAPKAPK2
Interaction	SETD1B interactions	KMT2D HDAC4 PAXIP1 CXXC1	4.36e-04	75	95	4	int:SETD1B
Interaction	TLX3 interactions	TET2 KMT2D PPAN ZFHX4 PAXIP1 FOXP1 ZFHX3	4.55e-04	291	95	7	int:TLX3
Interaction	KDM1A interactions	TET2 KMT2D NCAPG ZFHX4 BRD4 PLEKHA5 FOXP1 ZFHX3 UTRN DENND4C PHC1 PHC2 DCP1A	4.63e-04	941	95	13	int:KDM1A
Interaction	TOP3B interactions	MICALL1 KMT2D HDAC4 UBAP2L SEC24A BRD4 ZNF335 MCM3AP PAXIP1 NAV2 HELZ TNRC6C MLLT10 DNA2 TNFRSF21 MED13 PHC2	4.71e-04	1470	95	17	int:TOP3B
Interaction	MKRN2 interactions	PTPRA HDAC4 FOXP2 UBAP2L PRRC2C SYNE2 HELZ TNRC6C	4.72e-04	385	95	8	int:MKRN2
Interaction	HCFC1 interactions	KMT2D UBAP2L PRRC2C BRD4 ZNF335 PAXIP1 CXXC1	4.74e-04	293	95	7	int:HCFC1
Interaction	NFIC interactions	TET2 KMT2D SEC24A BRD4 PAXIP1 FOXP1	4.79e-04	210	95	6	int:NFIC
Interaction	FUBP3 interactions	KIF21B UBAP2L PRRC2C BRD4 YLPM1 HELZ TNRC6C	5.14e-04	297	95	7	int:FUBP3
Cytoband	9p22.1	DENND4C PLIN2	3.87e-04	14	96	2	9p22.1
Cytoband	14q21.2	TOGARAM1 FANCM	8.02e-04	20	96	2	14q21.2
Cytoband	19p13	CACNA1A PPAN	1.47e-03	27	96	2	19p13
Cytoband	Ensembl 112 genes in cytogenetic band chr2q32	FSIP2 STK17B ZC3H15	1.63e-03	110	96	3	chr2q32
Cytoband	2q32.1	FSIP2 ZC3H15	1.81e-03	30	96	2	2q32.1
GeneFamily	Ataxins\|Trinucleotide repeat containing	KMT2D FOXP2 PAXIP1 TNRC6C MAML3	4.34e-08	25	72	5	775
GeneFamily	PHD finger proteins	TRIM66 KMT2D BAZ2A BAZ2B PHF3 MLLT10 CXXC1	6.77e-08	90	72	7	88
GeneFamily	Histone deacetylases, class IIA	HDAC9 HDAC4	9.34e-05	4	72	2	992
GeneFamily	CD molecules\|Toll like receptors	TLR10 TLR8	6.89e-04	10	72	2	948
GeneFamily	UPF1 like RNA helicases	HELZ DNA2	8.40e-04	11	72	2	1169
GeneFamily	Zinc fingers CXXC-type\|Methyl-CpG binding domain containing	BAZ2A BAZ2B	8.40e-04	11	72	2	1025
GeneFamily	Zinc fingers C2H2-type\|ZF class homeoboxes and pseudogenes	ZFHX4 ZFHX3	1.59e-03	15	72	2	529
GeneFamily	Protein tyrosine phosphatases, receptor type	PTPRA PTPRE	3.13e-03	21	72	2	813
GeneFamily	Sterile alpha motif domain containing	KAZN PHC1 PHC2	5.22e-03	88	72	3	760
GeneFamily	Cyclins\|Mediator complex	MED9 MED13	7.62e-03	33	72	2	1061
GeneFamily	Zinc fingers CCCH-type	ZC3H15 HELZ	8.55e-03	35	72	2	73
Coexpression	DACOSTA_UV_RESPONSE_VIA_ERCC3_DN	SP3 PTPRA HDAC4 BAZ2B PHF3 PRRC2C SEC24A SYNE2 HELZ TOGARAM1 ZFHX3 KAZN MTCL1 GPATCH8 TTK MED13	8.40e-08	856	96	16	M4500
Coexpression	GSE26343_UNSTIM_VS_LPS_STIM_MACROPHAGE_DN	KIF21B HDAC9 BAZ2B NAV2 ZFHX3 FAM117B RFWD3 PLIN2	7.46e-07	200	96	8	M8648
Coexpression	SCHAEFFER_PROSTATE_DEVELOPMENT_6HR_DN	DAGLB TET2 CLCA1 HDAC4 BAZ2B UBAP2L PRRC2C BRD4 ZFHX3 CXXC1 RFWD3	1.15e-06	467	96	11	M1347
Coexpression	SCHAEFFER_PROSTATE_DEVELOPMENT_6HR_DN	DAGLB TET2 CLCA1 HDAC4 BAZ2B UBAP2L PRRC2C BRD4 ZFHX3 CXXC1 RFWD3	1.63e-06	484	96	11	MM999
Coexpression	GSE37532_VISCERAL_ADIPOSE_TISSUE_VS_LN_DERIVED_TREG_CD4_TCELL_DN	PRDM10 BRD4 AHR PARD6G HELZ FAM117B DCP1A	1.69e-06	155	96	7	M8944
Coexpression	BUYTAERT_PHOTODYNAMIC_THERAPY_STRESS_UP	PRDM10 BAZ2A BAZ2B PHF3 STK17B SEC24A BRD4 AHR NAV2 GPATCH8 DENND4C PPL DCP1A PLIN2	1.76e-06	822	96	14	M6782
Coexpression	GSE27241_WT_VS_RORGT_KO_TH17_POLARIZED_CD4_TCELL_TREATED_WITH_DIGOXIN_UP	KIF21B TET2 PRDM10 BAZ2A PRRC2C UTRN MED13	4.57e-06	180	96	7	M8239
Coexpression	GSE411_100MIN_VS_400MIN_IL6_STIM_SOCS3_KO_MACROPHAGE_DN	KMT2D USF3 PTPRE BAZ2A BAZ2B CIZ1 PARD6G	9.10e-06	200	96	7	M5995
Coexpression	GOBERT_OLIGODENDROCYTE_DIFFERENTIATION_DN	TET2 HDAC9 PTPRE FOXP2 BAZ2B PRRC2C YLPM1 AHR NAV2 PARD6G HELZ FOXP1 ZFHX3 KAZN TNFRSF21	1.11e-05	1102	96	15	M2369
Coexpression	LAKE_ADULT_KIDNEY_C25_ENDOTHELIAL_CELLS_UNASSIGNED	FOXP2 FOXP1 ZFHX3 UTRN	1.13e-05	38	96	4	M39244
Coexpression	GOBERT_OLIGODENDROCYTE_DIFFERENTIATION_DN	TET2 HDAC9 PTPRE FOXP2 BAZ2B PRRC2C YLPM1 AHR NAV2 PARD6G HELZ FOXP1 ZFHX3 KAZN TNFRSF21	1.40e-05	1124	96	15	MM1070
Coexpression	DAZARD_RESPONSE_TO_UV_NHEK_DN	SP3 BAZ2B PHF3 AHR HELZ TOGARAM1 MTCL1 PHC2	1.49e-05	300	96	8	M8702
Coexpression	THAKAR_PBMC_INACTIVATED_INFLUENZA_AGE_21_30YO_RESPONDERS_28DY_DN	DAGLB ANKRD36B KIF21B TRIM66 PTPRE MCM3AP AAK1 AHR ADGRG1 ZFHX3 ANKRD36 UTRN CXXC1	2.60e-05	905	96	13	M40865
Coexpression	GSE7509_UNSTIM_VS_FCGRIIB_STIM_MONOCYTE_DN	TET2 PRDM10 BAZ2A PAXIP1 NAV2 TNRC6C	3.41e-05	166	96	6	M6826
Coexpression	GSE37532_WT_VS_PPARG_KO_LN_TREG_UP	BRD4 CIZ1 AHR PARD6G HELZ FAM117B	4.73e-05	176	96	6	M8952
Coexpression	HEVNER_CORTEX_APICAL_AND_BASAL_INTERMEDIATE_PROGENITOR_CELLS	HDAC9 BAZ2A BAZ2B NCKAP5	4.99e-05	55	96	4	MM397
Coexpression	HE_LIM_SUN_FETAL_LUNG_C5_PRO_B_CELL	NCAPG SYNE2 KIF4A ADGRG1 PLEKHA5 ANKRD36 DNA2 TTK RFWD3	6.59e-05	478	96	9	M45785
Coexpression	GSE32533_WT_VS_MIR17_KO_ACT_CD4_TCELL_DN	PRDM10 BRD4 CIZ1 MLLT10 UTRN MED13	8.83e-05	197	96	6	M8464
Coexpression	GSE13493_DP_VS_CD4INTCD8POS_THYMOCYTE_UP	USF3 ZNF335 NAV2 HELZ MED13 DENND4C	9.60e-05	200	96	6	M3312
Coexpression	GSE17721_CTRL_VS_CPG_2H_BMDC_DN	CACNA1A PTPRA PTPRE PHLDA1 STK17B FOXP1	9.60e-05	200	96	6	M3760
Coexpression	GSE41176_WT_VS_TAK1_KO_ANTI_IGM_STIM_BCELL_6H_UP	SEC24A ZNF335 UBQLN3 AHR NCKAP5 KAZN	9.60e-05	200	96	6	M9942
Coexpression	GSE38304_MYC_NEG_VS_POS_GC_BCELL_UP	KMT2D BRDT BAZ2B PARD6G MAGI3 MED13	9.60e-05	200	96	6	M9273
Coexpression	BUSSLINGER_GASTRIC_IMMUNE_CELLS	KIF21B SP3 KMT2D PTPRA PTPRE PHLDA1 PHF3 STK17B AAK1 AHR HELZ TNRC6C GPATCH8 UTRN MED13 DCP1A	9.86e-05	1492	96	16	M40023
Coexpression	GAZIN_EPIGENETIC_SILENCING_BY_KRAS	HDAC9 TRIM66 BAZ2A	1.03e-04	25	96	3	M1770
Coexpression	GAZIN_EPIGENETIC_SILENCING_BY_KRAS	HDAC9 TRIM66 BAZ2A	1.31e-04	27	96	3	MM744
Coexpression	KRIGE_RESPONSE_TO_TOSEDOSTAT_24HR_UP	KIF21B HDAC9 PTPRE BAZ2A BAZ2B SEC24A AAK1 PLEKHA5 UTRN MAML3 PLIN2	1.31e-04	778	96	11	M17915
Coexpression	SHEN_SMARCA2_TARGETS_UP	SP3 ERCC3 BAZ2B PHF3 ZC3H15 COMMD10 USP9Y DENND4C	1.82e-04	429	96	8	M29
CoexpressionAtlas	DevelopingLowerUrinaryTract_e14.5_ Genital tubercle M_emap-6706_k-means-cluster#5_top-relative-expression-ranked_1000	HDAC9 SP3 PTPRE SEC24A YLPM1 TOGARAM1 FOXP1 ZFHX3 NCKAP5 DNA2 MED13	1.25e-05	492	95	11	gudmap_developingLowerUrinaryTract_e14.5_ Genital tubercle M_1000_k5
CoexpressionAtlas	DevelopingLowerUrinaryTract_e14.5_ bladder_emap-30872_top-relative-expression-ranked_1000	MICALL1 HDAC9 SP3 NCAPG CLCA1 ZFHX4 FOXP2 PHF3 PLEKHA5 FOXP1 MTCL1 UTRN MED13 DCP1A	1.46e-05	811	95	14	gudmap_developingLowerUrinaryTract_e14.5_ bladder_1000
CoexpressionAtlas	DevelopingLowerUrinaryTract_e14.5_ Genital tubercle M_emap-6706_top-relative-expression-ranked_1000	HDAC9 SP3 CLCA1 PTPRE ZFHX4 FOXP2 SEC24A YLPM1 TOGARAM1 FOXP1 ZFHX3 NCKAP5 DNA2 MED13	2.04e-05	836	95	14	gudmap_developingLowerUrinaryTract_e14.5_ Genital tubercle M_1000
CoexpressionAtlas	DevelopingLowerUrinaryTract_e14.5_ urogenital sinus_emap-5517_k-means-cluster#2_top-relative-expression-ranked_500	FOXP2 PHF3 BRD4 PARD6G PLEKHA5 MED13 DCP1A	4.30e-05	209	95	7	gudmap_developingLowerUrinaryTract_e14.5_ urogenital sinus_500_k2
CoexpressionAtlas	DevelopingLowerUrinaryTract_e14.5_ Genital tubercle F_emap-6706_k-means-cluster#5_top-relative-expression-ranked_1000	HDAC9 SP3 PTPRE ZFHX4 SEC24A YLPM1 FOXP1 ZFHX3 NCKAP5 RFWD3	5.56e-05	478	95	10	gudmap_developingLowerUrinaryTract_e14.5_ Genital tubercle F_1000_k5
CoexpressionAtlas	DevelopingLowerUrinaryTract_e14.5_ urogenital sinus_emap-5517_k-means-cluster#4_top-relative-expression-ranked_1000	ZNF23 FOXP2 PHF3 BRD4 PARD6G PLEKHA5 FOXP1 MED13 DCP1A	5.74e-05	385	95	9	gudmap_developingLowerUrinaryTract_e14.5_ urogenital sinus_1000_k4
CoexpressionAtlas	DevelopingLowerUrinaryTract_e14.5_ urethra_emap-30902_top-relative-expression-ranked_1000	HDAC9 SP3 CLCA1 ZFHX4 FOXP2 PHLDA1 PHF3 PARD6G PLEKHA5 FOXP1 MTCL1 MED13 DCP1A	6.08e-05	806	95	13	DevelopingLowerUrinaryTract_e14.5_ urethra_emap-30902_1000
CoexpressionAtlas	FacebaseRNAseq_e10.5_Neural Epithelium Overlying Medial Eminence_top-relative-expression-ranked_2500_k-means-cluster#2	MICALL1 KIF21B SP3 ERCC3 FOXP2 UBAP2L MCM3AP PARD6G TOGARAM1 ZFHX3 UTRN	7.29e-05	597	95	11	Facebase_RNAseq_e10.5_Neural Epithelium Overlying Medial Eminence_2500_K2
CoexpressionAtlas	DevelopingLowerUrinaryTract_e14.5_ urethra_emap-30892_k-means-cluster#2_top-relative-expression-ranked_1000	HDAC4 FOXP2 PHF3 PARD6G PLEKHA5 FOXP1 GPATCH8 MED13	7.97e-05	312	95	8	gudmap_developingLowerUrinaryTract_e14.5_ urethra_1000_k2
CoexpressionAtlas	DevelopingLowerUrinaryTract_e14.5_ urogenital sinus_emap-5517_top-relative-expression-ranked_500	CLCA1 ZFHX4 FOXP2 PHF3 BRD4 PARD6G PLEKHA5 MED13 DCP1A	1.04e-04	416	95	9	gudmap_developingLowerUrinaryTract_e14.5_ urogenital sinus_500
CoexpressionAtlas	DevelopingLowerUrinaryTract_e14.5_ Genital tubercle F_emap-6706_top-relative-expression-ranked_1000	HDAC9 SP3 CLCA1 PTPRE ZFHX4 FOXP2 SEC24A SYNE2 YLPM1 FOXP1 ZFHX3 NCKAP5 RFWD3	1.04e-04	850	95	13	gudmap_developingLowerUrinaryTract_e14.5_ Genital tubercle F_1000
CoexpressionAtlas	facebase_RNAseq_e10.5_MaxArch_2500_K3	CACNA1A TET2 SP3 ZNF23 FOXP2 UBAP2L STXBP4 BRD4 SYNE2 YLPM1 ADGRG1 ZFHX3 FANCM DNA2 TTK PHC1	1.29e-04	1252	95	16	facebase_RNAseq_e10.5_MaxArch_2500_K3
CoexpressionAtlas	FacebaseRNAseq_e8.5_Hind Brain Neural Epithelium_top-relative-expression-ranked_2500_k-means-cluster#3	NCAPG PHF3 PRRC2C PAXIP1 MAGI3 MLLT10 FANCM TTK MAML3 PHC1	1.34e-04	532	95	10	Facebase_RNAseq_e8.5_Hind Brain Neural Epithelium_2500_K3
CoexpressionAtlas	DevelopingGonad_e14.5_ ovary_emap-6699_top-relative-expression-ranked_1000	HDAC9 TRIM66 SP3 ZNF23 NCAPG CLCA1 BRDT UBAP2L STK17B SYNE2 NAV2 UTRN	1.77e-04	776	95	12	gudmap_developingGonad_e14.5_ ovary_1000
CoexpressionAtlas	DevelopingGonad_e12.5_epididymis_emap-29139_top-relative-expression-ranked_1000	SP3 ZNF23 NCAPG CLCA1 PTPRE HOXD9 BRDT UBAP2L PRRC2C SYNE2 NAV2 UTRN	2.50e-04	806	95	12	gudmap_developingGonad_e12.5_epididymis_1000
CoexpressionAtlas	DevelopingLowerUrinaryTract_e14.5_ urethra_emap-30892_top-relative-expression-ranked_1000	CLCA1 HDAC4 ZFHX4 FOXP2 PHF3 PARD6G PLEKHA5 FOXP1 MTCL1 TNRC6C GPATCH8 MED13	2.50e-04	806	95	12	gudmap_developingLowerUrinaryTract_e14.5_ urethra_1000
CoexpressionAtlas	DevelopingLowerUrinaryTract_e14.5_ urogenital sinus_emap-5517_top-relative-expression-ranked_1000	ZNF23 CLCA1 ZFHX4 FOXP2 PHF3 BRD4 PARD6G PLEKHA5 FOXP1 ZFHX3 MED13 DCP1A	2.86e-04	818	95	12	gudmap_developingLowerUrinaryTract_e14.5_ urogenital sinus_1000
CoexpressionAtlas	gamma delta T cells, Tgd.vg2-.Sp, TCRd+ Vg2- CD44-, Spleen, avg-3	KIF21B HDAC9 KMT2D HDAC4 AAK1 AHR FOXP1 UTRN	3.17e-04	382	95	8	GSM476684_500
CoexpressionAtlas	DevelopingLowerUrinaryTract_e14.5_ bladder_emap-30872_k-means-cluster#3_top-relative-expression-ranked_1000	HDAC9 SP3 ZFHX4 FOXP2 MTCL1	3.91e-04	138	95	5	gudmap_developingLowerUrinaryTract_e14.5_ bladder_1000_k3
CoexpressionAtlas	DevelopingLowerUrinaryTract_e14.5_ bladder_emap-30872_k-means-cluster#5_top-relative-expression-ranked_1000	NCAPG FOXP2 PHF3 PLEKHA5 FOXP1 UTRN MED13 DCP1A	4.10e-04	397	95	8	gudmap_developingLowerUrinaryTract_e14.5_ bladder_1000_k5
CoexpressionAtlas	DevelopingLowerUrinaryTract_e14.5_ urethra_emap-30892_top-relative-expression-ranked_500	CLCA1 ZFHX4 FOXP2 PARD6G FOXP1 MTCL1 TNRC6C MED13	4.83e-04	407	95	8	gudmap_developingLowerUrinaryTract_e14.5_ urethra_500
CoexpressionAtlas	DevelopingLowerUrinaryTract_e14.5_ urethra_emap-30902_top-relative-expression-ranked_500	HDAC9 CLCA1 ZFHX4 FOXP2 PHF3 PARD6G MTCL1 MED13	4.91e-04	408	95	8	DevelopingLowerUrinaryTract_e14.5_ urethra_emap-30902_500
ToppCell	(03)_KRT6B+-(2)_GFP_FOXI1\|(03)_KRT6B+ / shred by cell type by condition	TET2 BAZ2B PHF3 PRRC2C BRD4 SYNE2 FOXP1 ANKRD36 UTRN	5.03e-10	199	96	9	c425e7975f492ed5cfcca022248adb627e1d27d4
ToppCell	Brain_organoid-organoid_Kanton_Nature\|Brain_organoid / Sample Type, Dataset, Time_group, and Cell type.	ANKRD36B BAZ2A BAZ2B PRRC2C SYNE2 AAK1 ADGRG1 ANKRD36C	6.84e-09	185	96	8	857c7ca8493e91ef1d0078ddafd6082020f9b169
ToppCell	mild-low-quality_cells\|World / Cohort 1 (10x PBMC) with disease condition, cell group and cell class	PHF3 PRRC2C SYNE2 AAK1 ANKRD36 ANKRD36C USP9Y UTRN	1.21e-08	199	96	8	f0b0097df0026496470a80d8cc9375ffd8389b00
ToppCell	10x5'-blood-Lymphocytic_T_CD4-T_CD4/CD8\|blood / Manually curated celltypes from each tissue	ANKRD36B SYNE2 AAK1 FOXP1 ANKRD36C USP9Y UTRN	6.27e-08	162	96	7	b4535bcb3f469bc139e73f1122f4070013e5a1de
ToppCell	10x5'-lymph-node_spleen-Lymphocytic_T_CD4-T_CD4/CD8\|lymph-node_spleen / Manually curated celltypes from each tissue	ANKRD36B HDAC4 SYNE2 AAK1 FOXP1 ANKRD36 ANKRD36C	2.00e-07	192	96	7	47646d7e4990be85072987f92bf18d52f8da752e
ToppCell	human_hepatoblastoma\|World / Sample and Cell Type and Tumor Cluster (all cells)	PHF3 PRRC2C MAGI3 HELZ PLEKHA5 UTRN MED13	2.07e-07	193	96	7	e6a688bc834f845ff64dae1be64f073eec5091a1
ToppCell	mild-low-quality_cells\|mild / Cohort 1 (10x PBMC) with disease condition, cell group and cell class	SYNE2 AAK1 ANKRD36 TNRC6C ANKRD36C USP9Y UTRN	2.38e-07	197	96	7	e4331969bd911d1ebb5453f40a7057297b5389b4
ToppCell	mild\|World / Cohort 1 (10x PBMC) with disease condition, cell group and cell class	TET2 PHF3 STK17B PRRC2C SYNE2 HELZ UTRN	2.63e-07	200	96	7	12f1685ce8f218433068e090c9d839cd5a1910bf
ToppCell	PND03-Epithelial-Epithelial_Alveolar-Epithelial_Alveolar-AT1/AT2\|PND03 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif	FOXP2 NAV2 ADGRG1 MAGI3 MTCL1 PPL	1.41e-06	162	96	6	06f5d6c0bb26fe9d5180bc2ebf2c54bf52e715f3
ToppCell	PND03-Epithelial-Epithelial_Alveolar-Epithelial_Alveolar-AT1/AT2-AT1/AT2_mature\|PND03 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif	FOXP2 NAV2 ADGRG1 MAGI3 MTCL1 PPL	1.41e-06	162	96	6	d0d9c18a73bc0bf4f38308ef2eee8ae20f6a7918
ToppCell	facs-Marrow-T-cells-3m-Lymphocytic-Klrb1a/b/c(-)_NK_cell\|Marrow / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation	KIF21B HDAC4 PHLDA1 MYO3B AAK1 TLR8	1.57e-06	165	96	6	651d40eadb1b34de618af94c167f43635729d43f
ToppCell	PND07-Immune-Immune_Lymphocytic_T/NK-Lymphocytic_T-CD4_T-CD4_T_G2M\|PND07 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif	KIF21B PRDM10 NCAPG STK17B KIF4A TTK	1.68e-06	167	96	6	754e6412d3b9cc0b126e59593df2f5956b4712ef
ToppCell	3'_v3-lymph-node_spleen-Lymphocytic_T_CD4-T_CD4/CD8\|lymph-node_spleen / Manually curated celltypes from each tissue	PRRC2C SYNE2 AAK1 ANKRD36 ANKRD36C UTRN	1.93e-06	171	96	6	2e9a20f8980b78325c52065a9c14ab3656267c05
ToppCell	10x5'-Liver-Lymphocytic_T_CD4-T_CD4/CD8\|Liver / Manually curated celltypes from each tissue	ANKRD36B SYNE2 AAK1 FOXP1 ANKRD36 ANKRD36C	2.68e-06	181	96	6	f2315414e714ac86211546a935660c4be6e85f1b
ToppCell	LPS-antiTNF-Epithelial_alveolar-AT_1-Differentiating_AT2\|LPS-antiTNF / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2	FOXP2 SYNE2 NAV2 MAGI3 UTRN PPL	3.23e-06	187	96	6	58d48128547ee3513d0bf7f78e61b76b1c472ca9
ToppCell	10x_3'_v2v3-Non-neoplastic-Myeloid-Mono-Mono_naive-B\|10x_3'_v2v3 / Platform, Oncotype, Lineage, Cell_class, celltype (level4), mutation group	TET2 PTPRE STK17B AHR UTRN PHC2	3.44e-06	189	96	6	55aba1ebc012006a5db3ff9c92589cb3d9f7c68a
ToppCell	5'-Parenchyma_lung-Immune_Lymphocytic-Lymphocytic_T/NK-CD8-positive,_alpha-beta_T_cell-CD8_T_cells-CD8_T_cells_L.1.1.4.0\|5' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5	ANKRD36B STK17B SYNE2 ADGRG1 ANKRD36 UTRN	3.54e-06	190	96	6	d153a0bdedcd6865e6ee19575234a78b5d859ff1
ToppCell	PCW_05-06-Mesenchymal-Mesenchymal_myocytic-mes_proliferating_SM_(20)\|PCW_05-06 / Celltypes from embryonic and fetal-stage human lung	NCAPG NAV2 KIF4A MTCL1 DNA2 RFWD3	3.54e-06	190	96	6	e83fa8b711aa79a1767818474f1c193b674b1c31
ToppCell	Brain_organoid-organoid_Paulsen_bioRxiv-3_mon-IPC_like\|3_mon / Sample Type, Dataset, Time_group, and Cell type.	HDAC9 DNAJC4 PHLDA1 BAZ2B SYNE2 ADGRG1	3.65e-06	191	96	6	48cffb55c71bb8b34e926fc461fcd345ce43ea00
ToppCell	Brain_organoid-organoid_Paulsen_bioRxiv-3_mon-IPC_like-IPCs\|3_mon / Sample Type, Dataset, Time_group, and Cell type.	HDAC9 DNAJC4 PHLDA1 BAZ2B SYNE2 ADGRG1	3.65e-06	191	96	6	e4c1c533771b582e21683dbec6f93a558d865e00
ToppCell	PBMC_fresh-frozen-Severe-critical_progression_d03-09-Lymphocytic-Lymphocytic_T-mature_alpha-beta_T_cell-T_CD8_c01-LEF1\|Severe-critical_progression_d03-09 / Compartment, severity and other cell annotations on 10x 3' data (130k)	PHF3 SYNE2 AAK1 FAM117B TNRC6C ANKRD36C	3.65e-06	191	96	6	696921a4f160b6b55698652488ed781e855e5e51
ToppCell	human_hepatoblastoma-Tumor_cells\|World / Sample and Cell Type and Tumor Cluster (all cells)	PHF3 MAGI3 HELZ PLEKHA5 UTRN MED13	3.76e-06	192	96	6	916fbec1c7ab7969bda711886ac88e877e30c280
ToppCell	severe-low-quality_cells\|severe / Cohort 1 (10x PBMC) with disease condition, cell group and cell class	SYNE2 AAK1 ANKRD36 ANKRD36C USP9Y UTRN	3.88e-06	193	96	6	9337bc93e3904c7fc7c93c328518bcd6453b1e8c
ToppCell	human_hepatoblastoma-Tumor_cells-T1\|Tumor_cells / Sample and Cell Type and Tumor Cluster (all cells)	NCAPG KIF4A FANCM DNA2 TTK RFWD3	3.88e-06	193	96	6	4b9fa2a4424f8abe63fa7bee78db93dda04ab15f
ToppCell	COVID_non-vent-Lymphocytic-T_cell\|COVID_non-vent / Disease condition, Lineage, Cell class and subclass	SYNE2 FOXP1 ANKRD36 TNRC6C ANKRD36C USP9Y	4.11e-06	195	96	6	4bdedd924564a260841a9153604026b57487c83d
ToppCell	PBMC_fresh-frozen-Mild-Moderate_progression_d12-25-Lymphocytic\|Mild-Moderate_progression_d12-25 / Compartment, severity and other cell annotations on 10x 3' data (130k)	PHF3 PRRC2C SYNE2 FOXP1 ANKRD36 ANKRD36C	4.11e-06	195	96	6	ed5f772c82d4dfd1c8735224446ec9feae3fb8c2
ToppCell	(1)_T_cells-(1)_T_CD4_naive\|(1)_T_cells / Spleen cell shreds - cell class (v1) and cell subclass (v1)	ANKRD36B PHF3 AAK1 FOXP1 ANKRD36 ANKRD36C	4.11e-06	195	96	6	d3fa551bc6f5ee5890af1040415e61ecd5d46201
ToppCell	Control-B_naive-8\|Control / disease group and sub_cluster of B and Plasma cells(res = 0.5)	PTPRE BAZ2B AAK1 FOXP1 TNFRSF21 PHC1	4.24e-06	196	96	6	54074da84000e4749ade8acc542f05a275bf829f
ToppCell	Children_(3_yrs)-Immune-monocyte\|Children_(3_yrs) / Lineage, Cell type, age group and donor	TET2 HDAC9 PTPRE STK17B MAML3 PHC2	4.24e-06	196	96	6	cacd69be72e6167814f7adea7c5fa114f3103bbb
ToppCell	COVID_non-vent-Lymphocytic\|COVID_non-vent / Disease condition, Lineage, Cell class and subclass	SYNE2 ADGRG1 FOXP1 ANKRD36 ANKRD36C USP9Y	4.36e-06	197	96	6	c672915f8c8c1e948d251f6eaf9f84a5600c1193
ToppCell	severe-low-quality_cells\|World / Cohort 1 (10x PBMC) with disease condition, cell group and cell class	PRRC2C SYNE2 AAK1 ANKRD36 ANKRD36C UTRN	4.36e-06	197	96	6	57ebd552f10d6278623b52a3d484d4b91ae1d028
ToppCell	10x5'-Liver-Lymphocytic_T_CD4\|Liver / Manually curated celltypes from each tissue	PHLDA1 STK17B SYNE2 AHR PARD6G FOXP1	4.36e-06	197	96	6	4891111894b741555f549deec6af8006376d9358
ToppCell	COVID-19_Mild\|World / Disease condition and Cell class	TET2 PTPRE STK17B PRRC2C AHR UTRN	4.49e-06	198	96	6	61ceb2245b6cb58e308b999a61d218c89dbc615e
ToppCell	(10)_Ciliated-(2)_GFP_FOXI1\|(10)_Ciliated / shred by cell type by condition	ANKRD36B PRRC2C BRD4 SYNE2 TOGARAM1 ANKRD36	4.62e-06	199	96	6	61b1ed2db71b96157b92b7535d1955a4033098da
ToppCell	Bronchial-10x5prime-Immune_Myeloid-Dendritic_cell-DC_2\|10x5prime / Cell types per location group and 10X technology with lineage, and cell group designations	TLR10 TET2 HDAC9 PTPRE STK17B AHR	4.62e-06	199	96	6	fdd8c4c04837341e17a4772a2adcdf2f187c56b1
ToppCell	lymphoid-NK_cell-NK_cell\|NK_cell / Lineage, cell class and subclass	PTPRE BAZ2A PRRC2C SYNE2 ADGRG1 HELZ	4.62e-06	199	96	6	945fbf5845403a8b22d04963f50ad69c414b6153
ToppCell	Smart-start-Cell-Wel_seq-Non-neoplastic-Myeloid-Mono-Mono_hypoxia-G\|Smart-start-Cell-Wel_seq / Platform, Oncotype, Lineage, Cell_class, celltype (level4), mutation group	TET2 PTPRE AHR UTRN MAML3 PLIN2	4.62e-06	199	96	6	379bbd9cecf466b902411c54d74bd9885285b1ba
ToppCell	mild-cDC\|World / Cohort 1 (10x PBMC) with disease condition, cell group and cell class	TET2 HDAC9 ZFHX3 NCKAP5 TNFRSF21 MAML3	4.76e-06	200	96	6	86f585bf9066b179bbcbc703bf43f15da4a07284
ToppCell	LPS_IL1RA-Endothelial-Endothelial-Gen_Cap\|LPS_IL1RA / Treatment groups by lineage, cell group, cell type	BAZ2B SYNE2 AHR FOXP1 NCKAP5 UTRN	4.76e-06	200	96	6	dccec522ab0d7fff62ad6273b02aa9022dbbb8eb
ToppCell	Hematolymphoid-Microglia-TYROBP----L1-3\|Hematolymphoid / cells hierarchy compared to all cells using T-Statistic	HDAC9 PTPRE FOXP2 COMMD10 NCKAP5 MAML3	4.76e-06	200	96	6	a20dce14f94777687aad57d6fbe3258ad376f63f
ToppCell	Hematolymphoid-Microglia-TYROBP--\|Hematolymphoid / cells hierarchy compared to all cells using T-Statistic	HDAC9 PTPRE FOXP2 COMMD10 NCKAP5 MAML3	4.76e-06	200	96	6	dc344b3ec51d506952e38f0b3a7795d65f9dd4eb
ToppCell	Neuronal\|World / cells hierarchy compared to all cells using T-Statistic	ANKRD36B CACNA1A AAK1 PLEKHA5 ANKRD36 TARBP1	4.76e-06	200	96	6	48d801219bc771d6c7e151dc88ca4c179988de85
ToppCell	Hematolymphoid-Microglia-TYROBP-\|Hematolymphoid / cells hierarchy compared to all cells using T-Statistic	HDAC9 PTPRE FOXP2 COMMD10 NCKAP5 MAML3	4.76e-06	200	96	6	3bba5219453322198e8fdb0921d5f8c403598751
ToppCell	Non-neuronal-Dividing-IPC-IPC-div2\|World / Primary Cells by Cluster	NCAPG ZFHX4 BAZ2B SYNE2 KIF4A PLIN2	4.76e-06	200	96	6	4923d7a4f00853c4d76fc1cc0fa82d522a2302e7
ToppCell	Hematolymphoid-Microglia\|Hematolymphoid / cells hierarchy compared to all cells using T-Statistic	HDAC9 PTPRE FOXP2 COMMD10 NCKAP5 MAML3	4.76e-06	200	96	6	21bcca3b670fe9bac034aef2275d3de4a9a73e2b
ToppCell	Non-neuronal-Dividing-IPC-IPC-div2-5\|World / Primary Cells by Cluster	NCAPG ZFHX4 BAZ2B SYNE2 KIF4A PLIN2	4.76e-06	200	96	6	dc1c1506823eaa105f1532c6b5d4efa14e788314
ToppCell	Hematolymphoid-Microglia-TYROBP---\|Hematolymphoid / cells hierarchy compared to all cells using T-Statistic	HDAC9 PTPRE FOXP2 COMMD10 NCKAP5 MAML3	4.76e-06	200	96	6	a8646d0fca99f10827c2d2a12e584660ef7155f1
ToppCell	Hematolymphoid-Microglia-TYROBP\|Hematolymphoid / cells hierarchy compared to all cells using T-Statistic	HDAC9 PTPRE FOXP2 COMMD10 NCKAP5 MAML3	4.76e-06	200	96	6	33036d21c1c82109284473a515c4f890b33fdd5c
ToppCell	3'_v3-blood-Lymphocytic_T_CD4-T_CD4/CD8\|blood / Manually curated celltypes from each tissue	PRRC2C SYNE2 ANKRD36 ANKRD36C UTRN	1.11e-05	135	96	5	ae2d3a42e567b5bade304c0caa497eb725be3565
ToppCell	AT1-AT2_cells-Donor_04\|World / lung cells shred on cell class, cell subclass, sample id	CACNA1A NAV2 MAGI3 NCKAP5 PPL	1.32e-05	140	96	5	45d52a086ced8d58e01ac51ac4a90338e8649b16
ToppCell	3'_v3-GI_small-bowel-Lymphocytic_T_CD4-T_CD4/CD8\|GI_small-bowel / Manually curated celltypes from each tissue	KMT2D AAK1 ANKRD36 ANKRD36C USP9Y	1.67e-05	147	96	5	94998bc40f5c08295cfe3bdcbe43f13b1e564b3d
ToppCell	3'_v3-Lung-Lymphocytic_T_CD4-T_CD4/CD8\|Lung / Manually curated celltypes from each tissue	ANKRD36B PRRC2C SYNE2 ANKRD36 ANKRD36C	1.90e-05	151	96	5	999c11d19b61d6b130ad5e623afa83cbdfe13cdd
ToppCell	10x5'-bone_marrow-Lymphocytic_T_CD4-T_CD4/CD8\|bone_marrow / Manually curated celltypes from each tissue	SYNE2 AAK1 FOXP1 ANKRD36 ANKRD36C	2.23e-05	156	96	5	1545169694f686d28648a68b552c2ae606599d66
ToppCell	Int-URO-Myeloid-cDC1\|Int-URO / Disease, Lineage and Cell Type	TLR10 HDAC9 PTPRE NCKAP5 TNFRSF21	2.83e-05	164	96	5	f4628a7ff0dc765a5337ab499b3d61fc25573a16
ToppCell	facs-Pancreas-Exocrine-24m-Epithelial-pancreatic_B_cell\|Pancreas / Large_Intestine_Pancreas_Liver - method, tissue, subtissue, age, lineage, cell ontology and free annotation	CACNA1A TRIM66 STXBP4 ZNF335 PARD6G	2.83e-05	164	96	5	b895674ed2df87db8fbfb30b7e31620945588491
ToppCell	3'-Parenchyma_lung-Immune_Myeloid-Myeloid_macrophage-alveolar_macrophage-Alveolar_macrophages-Alveolar_macrophages_L.1.6.2.0\|3' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5	KIF21B BAZ2A AAK1 DCP1A PLIN2	3.09e-05	167	96	5	881f64db8dea3faa7588bf04d87c20924a4e5952
ToppCell	normal_Pleural_Fluid-Myeloid_cells-CD163+CD14+_DCs\|Myeloid_cells / Location, Cell class and cell subclass	FSIP2 ERCC3 STXBP4 SYNE2 ANKRD36	3.27e-05	169	96	5	bea8aba1f3cc3d0e8d448c1c45f5354d26ebf850
ToppCell	renal_cortex_nuclei-Adult_normal_reference-Immune-Myeloid-Macrophage_Dendritic-Cycling_Mononuclear_Phagocyte\|Adult_normal_reference / Celltypes from Cells and Nuclei per compartment and clinical group	HDAC9 NCAPG STK17B KIF4A TTK	3.27e-05	169	96	5	54b13ab02b4c187f4754045ecfcf409749e7ccc0
ToppCell	PND14-Endothelial-Endothelial_lymphatic-Lymphatic_EC-LEC-LEC_mature\|PND14 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif	MICALL1 CLCA1 HOXD9 FOXP2 PARD6G	3.46e-05	171	96	5	686f95892c3909973c66c9a27159a070a068f175
ToppCell	PND14-Endothelial-Endothelial_lymphatic-Lymphatic_EC-LEC\|PND14 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif	MICALL1 CLCA1 HOXD9 FOXP2 PARD6G	3.46e-05	171	96	5	f7ba03e7bdb687f93782c936c7b3374cc5b3b77c
ToppCell	PND14-Endothelial-Endothelial_lymphatic\|PND14 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif	MICALL1 CLCA1 HOXD9 FOXP2 PARD6G	3.46e-05	171	96	5	d0ac50071a3854d02113c455fcc940a6ec59bbb9
ToppCell	PND14-Endothelial-Endothelial_lymphatic-Lymphatic_EC\|PND14 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif	MICALL1 CLCA1 HOXD9 FOXP2 PARD6G	3.46e-05	171	96	5	fbf8e9db00573adcada4b25730e191417b7c9999
ToppCell	renal_medulla_nuclei-Renal_AKI_(acute_kidney_injury)-Endothelial-blood_vessel_endothelial_cell_of_kidney-capillary-immature_endothelial_cell-Cycling_Endothelial_Cell\|Renal_AKI_(acute_kidney_injury) / Celltypes from Cells and Nuclei per compartment and clinical group	NCAPG PTPRE NAV2 TTK RFWD3	3.46e-05	171	96	5	c2dbc439af28d4fabb24d57685b75b2e588819b0
ToppCell	droplet-Thymus-nan-3m-Lymphocytic-Double_negative_thymocyte,_DN3_(Cd8-,_Cd4-),_some_express_pre_TCR_alpha\|Thymus / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation	HDAC4 AHR ADGRG1 KAZN MAML3	3.76e-05	174	96	5	0fccd90ef72ec2e5eb369fe6d6d126c60886485a
ToppCell	droplet-Thymus-nan-3m-Lymphocytic-DN3_thymocyte\|Thymus / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation	HDAC4 AHR ADGRG1 KAZN MAML3	3.76e-05	174	96	5	b2fc2a756f8e373ad903bd416d9de703d945fa1c
ToppCell	BAL-Control-Myeloid-cDC-cDC-cDC_11\|Control / Location, Disease Group, Cell group, Cell class and sub_cluster (2021.03.09)	TLR10 FSIP2 PTPRE PLEKHA5 NCKAP5	3.76e-05	174	96	5	c8cec89369cf3896c5626e447051e76a142cb6df
ToppCell	normal_Pleural_Fluid-Myeloid_cells-CD163+CD14+_DCs\|normal_Pleural_Fluid / Location, Cell class and cell subclass	FSIP2 ERCC3 STXBP4 PHC2 PLIN2	3.97e-05	176	96	5	7a74217b7fa1032b918f00a3972dff5fab74671a
ToppCell	LPS-IL1RA+antiTNF\|World / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2	BAZ2B PHF3 MAGI3 USP9Y UTRN	4.07e-05	177	96	5	b7fee75de7e96924af488a5baa2334711889ae7c
ToppCell	BALF-PFMC-Severe-critical_progression_d12-22_with-steroid-Lymphocytic-Lymphocytic_T-mature_alpha-beta_T_cell-T_CD8_c01-LEF1\|Severe-critical_progression_d12-22_with-steroid / Compartment, severity and other cell annotations on 10x 3' data (130k)	STK17B PRRC2C SYNE2 FOXP1 FAM117B	4.19e-05	178	96	5	73936c2e7e8855b4ab65cad425686513dba331a3
ToppCell	390C-Lymphocytic-NK_cells-Proliferating_NK_cell\|NK_cells / Donor, Lineage, Cell class and subclass (all cells)	TRIM66 NCAPG PAXIP1 KIF4A MAGI3	4.30e-05	179	96	5	e67ad7ab04d0c1309296f57c1f53c5ca14c213fe
ToppCell	LPS-IL1RA-Epithelial_alveolar-AT_1-Differentiating_AT1\|LPS-IL1RA / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2	FOXP2 NAV2 MAGI3 MTCL1 PPL	4.30e-05	179	96	5	04ce3673e46606f63d9c87bcba3a64c96817d812
ToppCell	human_hepatoblastoma-Tumor_cells-T6\|Tumor_cells / Sample and Cell Type and Tumor Cluster (all cells)	TET2 HDAC9 ZFHX4 KAZN MAML3	4.30e-05	179	96	5	14fc8ccb6b215063d747643f47d780d2b237eb67
ToppCell	PND01-Endothelial-Endothelial_blood-vessel-Microvascular_EC-EPC\|PND01 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif	TRIM66 NCAPG KIF4A FAM117B TTK	4.41e-05	180	96	5	b35a8c6169f4b548b912af005e92ae7c6596f376
ToppCell	Control-Neu_4\|World / 5 Neutrophil clusters in COVID-19 patients	CACNA1A CIZ1 ANKRD36C TTK UTRN	4.90e-05	184	96	5	ce7f044956613118ee2e9fb6af2455c3166cb414
ToppCell	normal-na-Lymphocytic_T-CytoT_GZMH+-male\|normal / PBMC cell types (v2) per disease, treatment status, and sex	PTPRA SYNE2 AAK1 ADGRG1 UTRN	5.03e-05	185	96	5	097d628f92e13250c15b550f2fd1f4225fc07558
ToppCell	10x_3'_v3-thymus_(10x_3'_v3)-lymphocytic-T_lymphocytic_-_developing-DN1_thymic_pro-T_cell\|thymus_(10x_3'_v3) / Per Platform+tissue_group, by lineage_subgroup, cell_group, cell_type	PHLDA1 SYNE2 AAK1 PLEKHA5 PLIN2	5.03e-05	185	96	5	5db31631a4b4c4bfeb28f02d8dab00a48d77bcba
ToppCell	pdx\|World / Sample and Cell Type and Tumor Cluster (all cells)	PLEKHA5 GPATCH8 UTRN MAML3 MED13	5.16e-05	186	96	5	de8e538c8767d41b8a52f5e58ba1affd4e7244c4
ToppCell	LPS-IL1RA-Epithelial_alveolar-AT_1-Differentiating_AT2\|LPS-IL1RA / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2	FOXP2 NAV2 MAGI3 MTCL1 UTRN	5.16e-05	186	96	5	4e94158db52df41d71e67b02b9895a358eebee0f
ToppCell	Smart-seq2-blood_(Smart-seq2)-myeloid-myeloid_monocytic-classical_monocyte\|blood_(Smart-seq2) / Per Platform+tissue_group, by lineage_subgroup, cell_group, cell_type	PTPRE BAZ2B PRRC2C AHR ZFHX3	5.16e-05	186	96	5	23b8d51d20b05795a73892d3e20e0f9b6a207820
ToppCell	pdx-Tumor_cells\|World / Sample and Cell Type and Tumor Cluster (all cells)	PLEKHA5 GPATCH8 UTRN MAML3 MED13	5.16e-05	186	96	5	0b88a87158a9ca8de3bf40a4ff1687150707a5f0
ToppCell	renal_cortex_nuclei-CKD+DKD_normotensive-Epithelial-Proximal_tubule_epithelial_cell-kidney_proximal_tubule_epithelial_cell-Adaptive_/_Maladaptive_/_Repairing_Proximal_Tubule_Epithelial_Cell\|CKD+DKD_normotensive / Celltypes from Cells and Nuclei per compartment and clinical group	FOXP2 SYNE2 PLEKHA5 NCKAP5 MTCL1	5.16e-05	186	96	5	b87acc80b7baa41681e4ed11d5537b9fbf5832f5
ToppCell	COPD-Epithelial-Club\|World / Disease state, Lineage and Cell class	AHR NAV2 MAGI3 NCKAP5 PPL	5.16e-05	186	96	5	3006f4ab1eaf1eb34c10ca9f7c869603d2d25744
ToppCell	renal_cortex_nuclei-CKD+DKD_normotensive-Epithelial-Proximal_tubule_epithelial_cell-kidney_proximal_tubule_epithelial_cell-Degenerative_Proximal_Tubule_Epithelial_Cell\|CKD+DKD_normotensive / Celltypes from Cells and Nuclei per compartment and clinical group	ADGRG1 PLEKHA5 NCKAP5 TNFRSF21 PLIN2	5.29e-05	187	96	5	3ae3b8de1a195d4d5057cf3c64fcdb5f48681ce5
ToppCell	renal_cortex_nuclei-Renal_AKI_(acute_kidney_injury)-Epithelial-Proximal_tubule_epithelial_cell-kidney_proximal_tubule_epithelial_cell_cycling\|Renal_AKI_(acute_kidney_injury) / Celltypes from Cells and Nuclei per compartment and clinical group	NCAPG KIF4A DNA2 TTK RFWD3	5.29e-05	187	96	5	9351fa87b69a951af85b10bf91fe9b1cce8c0517
ToppCell	10x5'-GI_small-bowel-Lymphocytic_T_CD4-T_CD4/CD8\|GI_small-bowel / Manually curated celltypes from each tissue	SYNE2 ANKRD36 ANKRD36C UTRN MED13	5.43e-05	188	96	5	ab9b725d6e0cdab8e9ddda6dee09e14730e9a578
ToppCell	droplet-Lung-1m-Endothelial-lymphatic_endothelial-lymphatic_endothelial_cell-lymphatic_endothelial_cell\|1m / method, tissue, age, lineage, sublineage, cell ontologies, cell type and subtype	CLCA1 ZFHX4 HOXD9 FOXP2 PARD6G	5.43e-05	188	96	5	dc52dd2957be3f40001f0a56f3d9ac9d66ea466e
ToppCell	droplet-Tongue-nan\|Tongue / Tongue_Heart_Limb_Muscle_Aorta_Diaphragm - method, tissue, subtissue, age, lineage, cell ontology and free annotation	PHLDA1 PRRC2C BRD4 SYNE2 AHR	5.43e-05	188	96	5	d62cc37e86b7b186e53aeb7f421c4e5ee28f23bd
ToppCell	Fetal_29-31_weeks-Epithelial-alveolar_epithelial_cell_type_1-D088\|Fetal_29-31_weeks / Lineage, Cell type, age group and donor	PTPRE NAV2 MTCL1 TNFRSF21 PPL	5.43e-05	188	96	5	43a3a59f92ad93509d4166bd025aed0b1b39a008
ToppCell	droplet-Lung-1m-Endothelial-lymphatic_endothelial\|1m / method, tissue, age, lineage, sublineage, cell ontologies, cell type and subtype	CLCA1 ZFHX4 HOXD9 FOXP2 PARD6G	5.43e-05	188	96	5	2ef08313087e91985bcffc46c3798470cdeec49c
ToppCell	droplet-Lung-1m-Endothelial-lymphatic_endothelial-lymphatic_endothelial_cell\|1m / method, tissue, age, lineage, sublineage, cell ontologies, cell type and subtype	CLCA1 ZFHX4 HOXD9 FOXP2 PARD6G	5.43e-05	188	96	5	1f1604b6dc0a8ad0be3d9aac0bef448459c22465
ToppCell	3'_v3-lymph-node_spleen-Myeloid_Dendritic-Cycling_Dendritic\|lymph-node_spleen / Manually curated celltypes from each tissue	NCAPG KIF4A NCKAP5 TTK TNFRSF21	5.43e-05	188	96	5	723348a1836a074e068320cb736ce6a953e0038f
ToppCell	NS-critical-d_0-4-Lymphoid-CTL\|d_0-4 / Location, Severity, dps_group, Lineage and Cell class of Upper airway (combined)	STK17B SYNE2 AAK1 ANKRD36 TNRC6C	5.56e-05	189	96	5	fb7572fb4c7c43886d57a025decad076f32a14c4
ToppCell	renal_medulla_nuclei\|World / Celltypes from Cells and Nuclei per compartment and clinical group	FOXP2 MYO3B MAGI3 KAZN UTRN	5.56e-05	189	96	5	830d9cd0dd706bce22eb2416f07b2c31c870a05a
ToppCell	Control-Endothelial-Endothelial-FOXM1\|Control / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2	NCAPG NAV2 KIF4A TTK RFWD3	5.56e-05	189	96	5	1e1499b062d9c647c8f38b0c4e0d871d159be5dd
ToppCell	COVID-19-kidney-PCT-S2\|kidney / Disease (COVID-19 only), tissue and cell type	FOXP2 SYNE2 PLEKHA5 NCKAP5 MTCL1	5.56e-05	189	96	5	0be5c669b6b308bd98ddb70c84877c62a6244bbd
ToppCell	renal_cortex_nuclei-Adult_normal_reference-Endothelial-blood_vessel_endothelial_cell_of_kidney-capillary-immature_endothelial_cell-Cycling_Endothelial_Cell\|Adult_normal_reference / Celltypes from Cells and Nuclei per compartment and clinical group	NCAPG KIF4A ANKRD36C TTK RFWD3	5.70e-05	190	96	5	31de1727822e9818652946dfb962daee77ffad68
ToppCell	NS-critical-d_0-4-Lymphoid\|d_0-4 / Location, Severity, dps_group, Lineage and Cell class of Upper airway (combined)	STK17B SYNE2 AAK1 ANKRD36 TNRC6C	5.70e-05	190	96	5	84f9f5ac29ff0f929a589b76efa61d4c570e76b0
ToppCell	pdx-Tumor_cells-T1\|Tumor_cells / Sample and Cell Type and Tumor Cluster (all cells)	NCAPG KIF4A DNA2 TTK RFWD3	5.70e-05	190	96	5	d06ee5f89f1cec8db6897fe3b2a890a07cd3697b
ToppCell	COPD-Epithelial-Club\|COPD / Disease state, Lineage and Cell class	AHR NAV2 MAGI3 NCKAP5 PPL	5.85e-05	191	96	5	c909cf5fa0e6519aa93a47d2c3fcd2ae2163cd8d
ToppCell	PBMC_fresh-frozen-Severe-critical_progression_d03-09-Lymphocytic-Lymphocytic_T-mature_alpha-beta_T_cell\|Severe-critical_progression_d03-09 / Compartment, severity and other cell annotations on 10x 3' data (130k)	SYNE2 AAK1 FOXP1 TNRC6C ANKRD36C	5.85e-05	191	96	5	d9a6f61fcda4f5352488f7f55cb9b57aeacc717f
Drug	Iodipamide [606-17-7]; Up 200; 3.6uM; MCF7; HT_HG-U133A	CACNA1A KIF21B BAZ2A AAK1 ZFHX3 KAZN CXXC1 TLR8	1.68e-06	196	95	8	5510_UP
Drug	AC1L2FXT	BRD4 PHC1 PHC2	8.27e-06	10	95	3	CID000071316
Drug	genistein; Up 200; 10uM; HL60; HT_HG-U133A	KMT2D BRDT PHLDA1 PHF3 SEC24A MCM3AP ZFHX3	1.45e-05	189	95	7	2695_UP
Drug	AC1L2XIZ	BRD4 PHC1 PHC2	1.51e-05	12	95	3	CID000104803
Drug	prochlorperazine dimaleate salt; Up 200; 10uM; MCF7; HG-U133A	DNAJC4 HOXD9 BAZ2A ZNF335 AHR GPATCH8 TNFRSF21	1.66e-05	193	95	7	455_UP
Drug	Succimer	CACNA1A KIF21B TET2 HDAC9 ZFHX4 PHLDA1 BAZ2B UBAP2L PHF3 ZC3H15 STXBP4 NAV2 HELZ FOXP1 MLLT10 UTRN MED13	1.70e-05	1264	95	17	ctd:D004113
Drug	Methoxamine hydrochloride [61-16-5]; Up 200; 16.2uM; MCF7; HT_HG-U133A	ZFHX4 PHF3 STK17B ADGRG1 MTCL1 MLLT10 CXXC1	1.96e-05	198	95	7	2848_UP
Drug	Magnetite Nanoparticles	CACNA1A KIF21B TET2 HDAC9 ZFHX4 PHLDA1 BAZ2B UBAP2L PHF3 ZC3H15 STXBP4 NAV2 HELZ FOXP1 MLLT10 UTRN MED13	2.68e-05	1310	95	17	ctd:D058185
Disease	breast cancer, ovarian carcinoma	TLR10 STXBP4 FOXP1 MLLT10	6.14e-06	37	95	4	EFO_0001075, MONDO_0007254
Disease	urinary albumin to creatinine ratio	FOXP2 PRRC2C AHR KAZN MLLT10 PHC2	2.55e-05	179	95	6	EFO_0007778
Disease	taste liking measurement	TET2 TRIM66 FOXP2 BAZ2B AHR FOXP1 ZFHX3 MLLT10	3.73e-05	388	95	8	EFO_0010155
Disease	specific developmental disorder (implicated_via_orthology)	FOXP2 FOXP1	6.13e-05	4	95	2	DOID:0060038 (implicated_via_orthology)
Disease	brain measurement, neuroimaging measurement	KIF21B HDAC9 FOXP2 NAV2 FOXP1 ZFHX3 NCKAP5 GPATCH8 MLLT10	7.22e-05	550	95	9	EFO_0004346, EFO_0004464
Disease	cortical surface area measurement	CACNA1A TET2 HDAC9 FOXP2 BAZ2B STK17B PRRC2C NAV2 FOXP1 ZFHX3 NCKAP5 FAM117B MTCL1 PHC2	1.01e-04	1345	95	14	EFO_0010736
Disease	prostate carcinoma	TET2 SP3 SYNE2 ADGRG1 FOXP1 ZFHX3 ANKRD36 GPATCH8 TTK MAML3 PPL	1.39e-04	891	95	11	EFO_0001663
Disease	coffee consumption	YLPM1 AHR CXXC1	1.50e-04	32	95	3	EFO_0004330
Disease	attention deficit hyperactivity disorder	DAGLB FOXP2 NAV2 FOXP1 ZFHX3 NCKAP5 MAML3	1.51e-04	354	95	7	EFO_0003888
Disease	Paroxysmal atrial fibrillation	PHLDA1 SYNE2 MYPN NAV2 ZFHX3	1.53e-04	156	95	5	C0235480
Disease	familial atrial fibrillation	PHLDA1 SYNE2 MYPN NAV2 ZFHX3	1.53e-04	156	95	5	C3468561
Disease	Persistent atrial fibrillation	PHLDA1 SYNE2 MYPN NAV2 ZFHX3	1.53e-04	156	95	5	C2585653
Disease	Prostatic Neoplasms	TET2 KMT2D BAZ2A BRD4 CIZ1 AHR ZFHX3 TNFRSF21 PPL	1.69e-04	616	95	9	C0033578
Disease	Malignant neoplasm of prostate	TET2 KMT2D BAZ2A BRD4 CIZ1 AHR ZFHX3 TNFRSF21 PPL	1.69e-04	616	95	9	C0376358
Disease	Atrial Fibrillation	PHLDA1 SYNE2 MYPN NAV2 ZFHX3	1.72e-04	160	95	5	C0004238
Disease	body weight	TET2 TRIM66 USF3 FOXP2 PHF3 STXBP4 AAK1 ZFHX3 KAZN MLLT10 DNA2 MAML3 PHC2	2.00e-04	1261	95	13	EFO_0004338
Disease	hypersomnia	PTPRA NCKAP5	2.13e-04	7	95	2	EFO_0005246
Disease	trauma exposure measurement	TET2 CLCA1 FOXP2 BRD4 ZFHX3	2.41e-04	172	95	5	EFO_0010703
Disease	multisite chronic pain	FOXP2 MLLT10 UTRN MAML3	2.57e-04	95	95	4	EFO_0010100
Disease	attention deficit hyperactivity disorder, substance abuse, antisocial behaviour measurement	TET2 FOXP2 UBAP2L HELZ PLEKHA5 FOXP1 ZFHX3 UTRN MAML3 PHC2	2.60e-04	801	95	10	EFO_0003888, EFO_0007052, MONDO_0002491
Disease	reaction time measurement	TET2 KMT2D FOXP2 BRD4 NAV2 FOXP1 ZFHX3 NCKAP5 TNRC6C	2.76e-04	658	95	9	EFO_0008393
Disease	gastroesophageal reflux disease	FOXP2 YLPM1 FOXP1 MAML3	3.24e-04	101	95	4	EFO_0003948
Disease	Congenital Heart Defects	BRD4 AHR MAML3	3.89e-04	44	95	3	C0018798
Disease	abdominal aortic calcification measurement	HDAC9 PLIN2	4.54e-04	10	95	2	EFO_0010272
Disease	polybrominated biphenyl measurement, gestational serum measurement, fetal genotype effect measurement, polybrominated diphenyl ether measurement	FOXP2 ZFHX3	5.54e-04	11	95	2	EFO_0007959, EFO_0007961, EFO_0007962, EFO_0007964
Disease	neuroimaging measurement	KIF21B HDAC9 FOXP2 STK17B PRRC2C NAV2 FOXP1 NCKAP5 MLLT10 DENND4C PLIN2	6.50e-04	1069	95	11	EFO_0004346
Disease	brain volume measurement	CACNA1A HDAC9 PTPRA ZFHX4 COMMD10 FOXP1 ZFHX3 MLLT10	6.81e-04	595	95	8	EFO_0006930
Disease	Autosomal recessive primary microcephaly	ZNF335 PHC1	1.05e-03	15	95	2	cv:C3711387
Disease	lung non-small cell carcinoma (is_implicated_in)	TET2 KMT2D ERCC3 ZFHX3	1.08e-03	139	95	4	DOID:3908 (is_implicated_in)
Disease	anthranilic acid measurement	HDAC4 MYO3B	1.20e-03	16	95	2	EFO_0010460
Disease	S-6-hydroxywarfarin measurement	PHLDA1 NAV2 ZFHX3 KAZN DENND4C PLIN2	1.24e-03	368	95	6	EFO_0803326
Disease	sphingomyelin 14:0 measurement	SYNE2 ZFHX3	1.35e-03	17	95	2	EFO_0010390
Disease	synophrys measurement	HDAC9 ZFHX4 NAV2	1.39e-03	68	95	3	EFO_0007906
Disease	Contact Dermatitis	HDAC4 AHR TLR8	1.58e-03	71	95	3	C0011616
Disease	Contact hypersensitivity	HDAC4 AHR TLR8	1.58e-03	71	95	3	C0162351
Disease	neuroticism measurement, wellbeing measurement, depressive symptom measurement	FOXP2 MAML3	1.69e-03	19	95	2	EFO_0007006, EFO_0007660, EFO_0007869
Disease	pulse pressure measurement	TET2 HDAC9 TRIM66 ZFHX4 MYPN FOXP1 ZFHX3 GPATCH8 ANKRD36C DENND4C PHC2 PLIN2	1.70e-03	1392	95	12	EFO_0005763
Disease	vital capacity	TET2 HDAC9 TRIM66 BRD4 MYPN AHR FOXP1 ZFHX3 MTCL1 MLLT10 UTRN	2.08e-03	1236	95	11	EFO_0004312
Disease	age of onset of asthma	HDAC9 PTPRA UBAP2L	2.14e-03	79	95	3	OBA_2001001
Disease	risky sexual behaviour measurement	TET2 FOXP2 FOXP1 ZFHX3	2.21e-03	169	95	4	EFO_0007877
Disease	neuroticism measurement, cognitive function measurement	TET2 FOXP2 YLPM1 NAV2 FOXP1 ZFHX3 MLLT10	2.38e-03	566	95	7	EFO_0007660, EFO_0008354
Disease	testosterone measurement	DAGLB TET2 ZFHX4 MED9 SYNE2 MYPN FOXP1 ZFHX3 KAZN UTRN PLIN2	2.65e-03	1275	95	11	EFO_0004908
Disease	cup-to-disc ratio measurement	MYPN NAV2 HELZ FOXP1 MTCL1 DNA2	2.70e-03	430	95	6	EFO_0006939
Disease	peptic ulcer disease, Peptic ulcer and gastro-oesophageal reflux disease (GORD) drug use measurement, gastroesophageal reflux disease	FOXP1 MAML3	2.70e-03	24	95	2	EFO_0003948, EFO_0009923, MONDO_0004247
Disease	childhood trauma measurement	FOXP2 FOXP1	2.70e-03	24	95	2	EFO_0007979
Disease	smoking status measurement, chronic obstructive pulmonary disease	TET2 HDAC4 MTCL1	2.91e-03	88	95	3	EFO_0000341, EFO_0006527
Disease	Fanconi Anemia	FANCM RFWD3	2.93e-03	25	95	2	C0015625
Disease	cortical thickness	MICALL1 HDAC9 FOXP2 STK17B YLPM1 NAV2 FOXP1 NCKAP5 MTCL1 MLLT10	3.11e-03	1113	95	10	EFO_0004840
Disease	HVA measurement	DENND4C PLIN2	3.17e-03	26	95	2	EFO_0005131
Disease	nevus count, cutaneous melanoma	HDAC4 SYNE2 AHR	3.20e-03	91	95	3	EFO_0000389, EFO_0004632

Protein segments in the cluster

Peptide	Gene	Start	Entry
QQQQHHQKQVVVEPQ	AHR	621	P35869
HQKQVVVEPQQQLCQ	AHR	626	P35869
PPLNHTVVQVNKNAN	CACNA1A	1176	O00555
QAQATPQHQQQLFLK	AAK1	456	Q2M2I8
VHEQLAALSQPQQNK	BRD4	521	O60885
KAVHQQLQVLSQVPF	BRDT	431	Q58F21
AQPQPQLQLQLQSHK	BAZ2A	1231	Q9UIF9
QTHSFQSQQKQPQVL	BAZ2B	336	Q9UIF8
YENNQPQVKNQIHSR	ANKRD36	1311	A6QL64
NNQPQVKNQIHSRDD	ANKRD36B	751	Q8N2N9
QKLRLTPQHDQIQTQ	DCP1A	396	Q9NPI6
QKLTSHQSQNLQQPR	RFWD3	401	Q6PCD5
GQPHKQVVENQQLFS	MTCL1	1126	Q9Y4B5
NNQPQVKNQIHSRDD	ANKRD36C	1176	Q5JPF3
PTKNLEQQVNHSQQG	PAXIP1	366	Q6ZW49
IAAVQKQQQQTGNHP	PTPRE	611	P23469
VQKNLHNPIVQSLED	KAZN	356	Q674X7
PQNAQALQHLVIQQQ	HDAC4	471	P56524
ENQPEIKHQSLLQKN	MAGI3	1176	Q5TCQ9
QQILAEQQLQQSHLP	MAML3	771	Q96JK9
GQNNANIIHTPTKQQ	KIAA2026	1426	Q5HYC2
HKHNQNENLVPNNRV	FANCM	1086	Q8IYD8
QTQPVLQSQVENLLH	MCM3AP	1701	O60318
ILAKQLHNIPENNQI	FSIP2	161	Q5CZC0
NVKPAALQQQLENIH	COMMD10	86	Q9Y6G5
AAQQHIQQQLLAKQV	GPATCH8	1326	Q9UKJ3
VTHTQKVVLQQDPQQ	PPL	1441	O60437
QQQQQQHPGKQAKEQ	FOXP2	186	O15409
QHPGKQAKEQQQQQQ	FOXP2	191	O15409
LDQQELIQQIPNAHK	KIF21B	1531	O75037
LQLLQQQHAGKQPKE	FOXP1	156	Q9H334
KEEEKQHSQPQQQQL	HOXD9	256	P28356
QPKQQHQQQLAEDAK	MICALL1	236	Q8N3F8
QSASGLQQPQHIQLQ	PRDM10	931	Q9NQV6
FPIPQQHTLLNQQQN	HELZ	1371	P42694
GIHLSPEQQQQQLQS	MED9	106	Q9NWA0
HNLIVTVKPANQRNN	PARD6G	241	Q9BYG4
EQQKQQLQEQPLKHN	PASD1	561	Q8IV76
QLQEQPLKHNVIVGN	PASD1	566	Q8IV76
PSQHHQQQQQQIKRS	CXXC1	151	Q9P0U4
VIQQVVDNPQHKTQL	BPIFA2	231	Q96DR5
LLHQQQDNIRNNQEP	DAGLB	241	Q8NCG7
FQLKQQQQQQHGSPT	FAM117B	41	Q6P1L5
QGPQLRQQQHKQNKQ	DNAJC4	141	Q9NNZ3
RQSIQHNNVLKPINL	DENND4C	1816	Q5VZ89
LTFQHQLQPKNVTLQ	ADGRG1	331	Q9Y653
PQTAELNHLKQQVQQ	KIF4A	346	O95239
QILQNFKHNPKINTI	ERCC3	591	P19447
QLVIQQQHQQFLEKQ	HDAC9	461	Q9UKV0
QIQKVHPAIQQFTEQ	DNA2	701	P51530
VQKQQQQSGNHPITV	PTPRA	716	P18433
KQHKLNQNDQLLSVP	UTRN	2891	P46939
QHQRQLAQALLVKQP	TNRC6C	1201	Q9HCJ0
EDVNKTLPNLQVVNH	TNFRSF21	286	O75509
NNNQIQTVPKETIHL	TLR10	451	Q9BXR5
SLHVLNQIKSQLQQP	SYNE2	3161	Q8WXH0
QNPQQQKLVKPTHNI	NCKAP5	766	O14513
HQHNPVQVQKLQKEL	SEC24A	721	O95486
KQQQQQPQKQHLSSP	NAV2	191	Q8IVL1
QTQAQTHKPVQNPLQ	PRRC2C	1931	Q9Y520
QNNIVHLDLKPQNIL	STK17B	151	O94768
QIHGKSQNQVRIPSQ	SEMG2	381	Q02383
LGQQQQILPKHKTNE	MED13	446	Q9UHV7
PTKEQHQALRQQVQA	STXBP4	231	Q6ZWJ1
EKEQLQQQLQQHGPV	SLFNL1	386	Q499Z3
QSHQLVSLQQLQQPT	SUPT20HL2	666	P0C7V6
QLLNSQQLTPEQHQA	MLLT10	976	P55197
LAQQPHQNQAKLVVA	NCAPG	16	Q9BPX3
TEQNHNKEAPNKQNQ	CLCA1	251	A8K7I4
QTQTSPEHLVLQQKQ	CIZ1	346	Q9ULV3
PEHLVLQQKQVQPQL	CIZ1	351	Q9ULV3
AHSQPPRQVQLQLQK	CIZ1	411	Q9ULV3
LQNLTKINLNHNPNV	TLR8	86	Q9NR97
KINLNHNPNVQHQNG	TLR8	91	Q9NR97
SKHLQPQFVIQQQPQ	PHC2	341	Q8IXK0
PAQIQMQLQHELQQQ	ZFHX4	1646	Q86UP3
NQTQHKQRPQATAEQ	UBAP2L	21	Q14157
QNLFPSINVHKVNLN	PPAN	161	Q9NQ55
RQKQQHLVQQQPPSQ	PHLDA1	296	Q8WV24
QNNSPQLNNVLEHLV	TMEM232	276	C9JQI7
AQPVVQHLQLQESQQ	SP3	391	Q02447
KAQVPLDSHSQQLQQ	USP29	271	Q9HBJ7
LHKQRNKPQQNLQED	PHF3	1406	Q92576
YTQIQPHSLIQQQQQ	PHC1	371	P78364
NVSHNLQKQTANVVP	USF3	171	Q68DE3
HLNNPQKTGQRTQEN	USP9Y	2526	O00507
QQHQQQPKSQAEPLS	YLPM1	846	P49750
FQQQQHQILATPLQN	TTK	491	P33981
NIQGVPQNIQDQAKH	PLIN2	331	Q99541
QLNQTLQKPHAEEQS	TARBP1	846	Q13395
SQLIQHQENNTEEKP	ZNF23	181	P17027
VTHQVKFGQQNPRQV	ZC3H15	46	Q8WU90
QNLLNQAASQPPHIK	TOGARAM1	1691	Q9Y4F4
HRVLIKPEIQNNQKN	PLEKHA5	296	Q9HAU0
KQELIQHQKVQAPEQ	ZNF382	196	Q96SR6
HQKLKLSHFQQQPQQ	TRIM66	441	O15016
QTKSPQHLQQTIVGQ	TRIM66	536	O15016
SHLPQNQQQQQKLQI	TET2	736	Q6N021
LQQIEELKQQHSAAP	ZNF335	726	Q9H4Z2
NPQQLQPEAHFQVQL	UBQLN3	606	Q9H347
KAQVQVPQQSHQQIL	ZFHX3	1836	Q15911
VPQQSHQQILPQQQQ	ZFHX3	1841	Q15911
AKNPQLRHLSPQQQQ	KMT2D	4206	O14686
QLAKVLQDQKHQNPV	MYO3B	306	Q8WXR4
PKLDSTQLQQLHNQV	MYPN	656	Q86TC9