Cluster composition

Functions

CategoryNameIntersectionWithQueryPValueGenesInTermGenesInQueryGenesInTermInQueryID
GeneOntologyMolecularFunctionstructural molecule activity

COL3A1 KRT72 KRT1 KRT3 KRT26 KRT9 EPPK1 COL17A1 KRT17 EPB41L4B SYNM KRT27 RPS2 KRT74 MAP7 KRT79 ERBIN COL23A1 DES KRT76 KRT24 INA ERC2 TUBAL3

5.77e-0789117024GO:0005198
GeneOntologyMolecularFunctionstructural constituent of skin epidermis

KRT72 KRT1 KRT3 KRT74 KRT79 KRT76

1.64e-06431706GO:0030280
GeneOntologyMolecularFunctionG-rich strand telomeric DNA binding

HNRNPA1L2 TERF2 HNRNPA2B1

9.51e-05111703GO:0098505
GeneOntologyMolecularFunctionstructural constituent of cytoskeleton

KRT9 EPB41L4B SYNM ERBIN DES INA TUBAL3

1.26e-041301707GO:0005200
GeneOntologyMolecularFunctionsingle-stranded telomeric DNA binding

HNRNPA1L2 TERF2 HNRNPA2B1

1.63e-04131703GO:0043047
GeneOntologyMolecularFunctionsequence-specific single stranded DNA binding

HNRNPA1L2 TERF2 HNRNPA2B1

2.56e-04151703GO:0098847
GeneOntologyMolecularFunctionintermediate filament binding

EPPK1 SYNM KRT74

2.56e-04151703GO:0019215
GeneOntologyMolecularFunctiontelomeric DNA binding

HNRNPA1L2 TERF2 HNRNPA2B1 ZBTB10

3.65e-04401704GO:0042162
GeneOntologyMolecularFunctionmembrane insertase activity

EMC7 EMC4 MTCH1

3.78e-04171703GO:0032977
GeneOntologyMolecularFunctionRNA strand annealing activity

HNRNPA1L2 DDX3X

7.09e-0451702GO:0033592
GeneOntologyMolecularFunctionsingle-stranded DNA binding

HNRNPA1L2 TERF2 HNRNPA2B1 HNRNPU ALYREF FUBP3

1.02e-031341706GO:0003697
GeneOntologyMolecularFunctionkeratin filament binding

EPPK1 KRT74

1.06e-0361702GO:1990254
GeneOntologyBiologicalProcessintermediate filament cytoskeleton organization

KRT72 KRT1 KRT3 KRT26 KRT9 EPPK1 KRT17 SYNM KRT27 KRT74 KRT79 ERBIN DES KRT76 KRT24 INA

9.43e-179916616GO:0045104
GeneOntologyBiologicalProcessintermediate filament-based process

KRT72 KRT1 KRT3 KRT26 KRT9 EPPK1 KRT17 SYNM KRT27 KRT74 KRT79 ERBIN DES KRT76 KRT24 INA

1.12e-1610016616GO:0045103
GeneOntologyBiologicalProcessintermediate filament organization

KRT72 KRT1 KRT3 KRT26 KRT9 EPPK1 KRT17 KRT27 KRT74 KRT79 DES KRT76 KRT24 INA

1.01e-157516614GO:0045109
GeneOntologyBiologicalProcesskeratinization

KRT72 KRT1 KRT3 KRT17 KRT74 KRT79 KRT76

6.56e-06871667GO:0031424
GeneOntologyBiologicalProcessepithelial cell differentiation

KRT72 CDKN2B KRT1 KRT3 KRT26 KRT9 EPPK1 KRT17 KRT27 KRT74 NKX2-6 SOX8 MAP7 FOXA1 KRT79 HOXA5 KRT76 KRT24 GDF7 SAFB2 DMRT1

7.08e-0687016621GO:0030855
GeneOntologyBiologicalProcessmRNA processing

RBM15 RBMXL3 TENT4A HOXB-AS3 RBM3 HNRNPA1L2 VIRMA HNRNPA2B1 HNRNPU CIRBP PCF11 SAFB PRPF4 SAFB2 ALYREF

4.09e-0555116615GO:0006397
GeneOntologyBiologicalProcessmiRNA processing

HOXB-AS3 RBM3 HNRNPA2B1 DDX3X ZC3H10

4.11e-05481665GO:0035196
GeneOntologyBiologicalProcessregulation of mRNA processing

RBM15 RBMXL3 RBM3 HNRNPA2B1 HNRNPU CIRBP SAFB SAFB2

4.30e-051581668GO:0050684
GeneOntologyBiologicalProcessepithelium development

KRT72 CDKN2B KRT1 KRT3 KRT26 RBM15 KRT9 EPPK1 KRT17 KRT27 KRT74 NKX2-6 SOX8 MAP7 ITGA5 FOXA1 KRT79 HOXA5 GPR161 KRT76 KRT24 GDF7 SAFB2 LZTS2 DMRT1 EN1 INKA1

4.58e-05146916627GO:0060429
GeneOntologyBiologicalProcessSertoli cell differentiation

SOX8 MAP7 SAFB2 DMRT1

1.38e-04331664GO:0060008
GeneOntologyCellularComponentintermediate filament

KRT72 KRT1 KRT3 KRT26 KRT9 EPPK1 KRT17 SYNM KRT27 KRT74 KRT79 DES KRT76 KRT24 INA

4.81e-1022716815GO:0005882
GeneOntologyCellularComponentintermediate filament cytoskeleton

KRT72 KRT1 KRT3 KRT26 KRT9 EPPK1 KRT17 SYNM KRT27 KRT74 KRT79 DES KRT76 KRT24 INA

3.64e-0926316815GO:0045111
GeneOntologyCellularComponentkeratin filament

KRT72 KRT1 KRT3 KRT9 EPPK1 KRT17 KRT74 KRT79 KRT76

8.80e-08971689GO:0045095
GeneOntologyCellularComponentpolymeric cytoskeletal fiber

KRT72 KRT1 KRT3 KRT26 KRT9 EPPK1 KRT17 SYNM KIF26A KRT27 KRT74 MAP7 KRT79 HNRNPU DES KRT76 KRT24 INA TTLL11 LZTS2 TUBAL3

1.15e-0589916821GO:0099513
GeneOntologyCellularComponentsupramolecular fiber

COL3A1 KRT72 KRT1 KRT3 KRT26 KRT9 EPPK1 KRT17 SYNM KIF26A KRT27 KRT74 POLR2M MAP7 KRT79 HNRNPU DES KRT76 KRT24 INA MYOZ1 TTLL11 LZTS2 TUBAL3

2.53e-05117916824GO:0099512
GeneOntologyCellularComponentsupramolecular polymer

COL3A1 KRT72 KRT1 KRT3 KRT26 KRT9 EPPK1 KRT17 SYNM KIF26A KRT27 KRT74 POLR2M MAP7 KRT79 HNRNPU DES KRT76 KRT24 INA MYOZ1 TTLL11 LZTS2 TUBAL3

2.83e-05118716824GO:0099081
GeneOntologyCellularComponentspliceosomal complex

RBMXL3 RBM3 HNRNPA1L2 PDCD7 HNRNPA2B1 HNRNPU CIRBP PRPF4 ALYREF

6.27e-052151689GO:0005681
GeneOntologyCellularComponenthemidesmosome

EPPK1 COL17A1 ERBIN

8.02e-05111683GO:0030056
GeneOntologyCellularComponentsex chromosome

SIN3B ZCWPW1 HNRNPU RING1

4.25e-04441684GO:0000803
GeneOntologyCellularComponentnuclear body

RBM15 TCF20 E4F1 TERF2 RUFY1 VIRMA ERBIN RFXAP HNRNPA2B1 REXO1 HNRNPU RING1 ADPRS PRPF4 SAFB2 ALYREF INO80B

9.95e-0490316817GO:0016604
DomainFilament

KRT72 KRT1 KRT3 KRT26 KRT9 KRT17 SYNM KRT27 KRT74 KRT79 DES KRT76 KRT24 INA

1.71e-157116614SM01391
DomainIF

KRT72 KRT1 KRT3 KRT26 KRT9 KRT17 SYNM KRT27 KRT74 KRT79 DES KRT76 KRT24 INA

2.11e-157216614PS00226
DomainFilament

KRT72 KRT1 KRT3 KRT26 KRT9 KRT17 SYNM KRT27 KRT74 KRT79 DES KRT76 KRT24 INA

2.59e-157316614PF00038
DomainIF

KRT72 KRT1 KRT3 KRT26 KRT9 KRT17 SYNM KRT27 KRT74 KRT79 DES KRT76 KRT24 INA

4.70e-157616614IPR001664
DomainIntermediate_filament_CS

KRT72 KRT1 KRT3 KRT9 KRT17 SYNM KRT74 KRT79 DES KRT76 KRT24 INA

2.93e-136316612IPR018039
DomainKeratin_I

KRT1 KRT3 KRT26 KRT9 KRT17 KRT27 KRT76 KRT24 INA

1.51e-10441669IPR002957
DomainKeratin_2_head

KRT72 KRT1 KRT3 KRT74 KRT79 KRT76

5.31e-08241666IPR032444
DomainKeratin_2_head

KRT72 KRT1 KRT3 KRT74 KRT79 KRT76

5.31e-08241666PF16208
DomainKeratin_II

KRT72 KRT1 KRT3 KRT74 KRT79 KRT76

8.95e-08261666IPR003054
DomainRRM_1

RBM15 RBMXL3 EIF4H RBM3 HNRNPA1L2 HNRNPA2B1 CIRBP SAFB SAFB2 ALYREF

1.74e-0520816610PF00076
DomainRRM

RBM15 RBMXL3 EIF4H RBM3 HNRNPA1L2 HNRNPA2B1 CIRBP SAFB SAFB2 ALYREF

2.50e-0521716610SM00360
DomainRRM_dom

RBM15 RBMXL3 EIF4H RBM3 HNRNPA1L2 HNRNPA2B1 CIRBP SAFB SAFB2 ALYREF

3.67e-0522716610IPR000504
DomainRRM

RBM15 RBMXL3 EIF4H RBM3 HNRNPA1L2 HNRNPA2B1 CIRBP SAFB SAFB2 ALYREF

4.11e-0523016610PS50102
Domain-

RBM15 RBMXL3 EIF4H RBM3 HNRNPA1L2 HNRNPA2B1 CIRBP SAFB SAFB2 ALYREF

6.74e-05244166103.30.70.330
DomainMAP3K12_MAP3K13

MAP3K12 MAP3K13

7.85e-0521662IPR017419
DomainNucleotide-bd_a/b_plait

RBM15 RBMXL3 EIF4H RBM3 HNRNPA1L2 HNRNPA2B1 CIRBP SAFB SAFB2 ALYREF

1.07e-0425816610IPR012677
DomainHnRNPA1

HNRNPA1L2 HNRNPA2B1

2.34e-0431662IPR021662
DomainHnRNPA1

HNRNPA1L2 HNRNPA2B1

2.34e-0431662PF11627
Domain-

HNRNPU SAFB SAFB2

8.15e-042116631.10.720.30
DomainSAP

HNRNPU SAFB SAFB2

9.38e-04221663PF02037
DomainSAP

HNRNPU SAFB SAFB2

1.07e-03231663SM00513
PathwayREACTOME_FORMATION_OF_THE_CORNIFIED_ENVELOPE

KRT72 KRT1 KRT26 KRT9 KRT17 KRT27 KRT74 KRT79 KRT76 KRT24

1.90e-098711410MM15351
PathwayREACTOME_FORMATION_OF_THE_CORNIFIED_ENVELOPE

KRT72 KRT1 KRT3 KRT26 KRT9 KRT17 KRT27 KRT74 KRT79 KRT76 KRT24

7.09e-0912911411M27649
PathwayREACTOME_KERATINIZATION

KRT72 KRT1 KRT26 KRT9 KRT17 KRT27 KRT74 KRT79 KRT76 KRT24

4.38e-0715311410MM15343
PathwayREACTOME_KERATINIZATION

KRT72 KRT1 KRT3 KRT26 KRT9 KRT17 KRT27 KRT74 KRT79 KRT76 KRT24

1.43e-0621711411M27640
PathwayREACTOME_DEVELOPMENTAL_BIOLOGY

COL3A1 KRT72 KRT1 KRT26 KRT9 KRT17 KRT27 KRT74 ITGA5 KRT79 CACNG8 KRT76 KRT24 TUBAL3

5.25e-0550211414MM14537
PathwayWP_MRNA_PROCESSING

RBMXL3 EIF4H RBM3 HNRNPA1L2 VIRMA HNRNPA2B1 DDX3X HNRNPU CIRBP PRPF4 AFG3L2 SAFB2 ALYREF

7.09e-0545111413MM15946
Pubmed

New consensus nomenclature for mammalian keratins.

KRT72 KRT1 KRT3 KRT26 KRT9 KRT17 KRT27 KRT74 KRT79 KRT76 KRT24

1.54e-14631721116831889
Pubmed

The HIV-1 Tat protein recruits a ubiquitin ligase to reorganize the 7SK snRNP for transcriptional activation.

KRT72 KRT1 KRT3 KRT26 KRT9 PDE4A RBMXL3 KRT17 KRT27 RPS2 KRT74 RBM3 LARP1 HNRNPA1L2 MAP7 KRT79 HNRNPA2B1 ZCCHC3 DDX3X HNRNPU CIRBP KRT76 KRT24 FAM120A PRPF4 ALYREF LSM14B TUBAL3

3.57e-1211531722829845934
Pubmed

E3 Ligase Trim21 Ubiquitylates and Stabilizes Keratin 17 to Induce STAT3 Activation in Psoriasis.

KRT72 KRT1 KRT9 PDE4A KRT17 KRT27 RPS2 KRT79 HNRNPA2B1 HNRNPU TTLL11 FUBP3

3.97e-121351721229859926
Pubmed

Targeting USP10 induces degradation of oncogenic ANLN in esophageal squamous cell carcinoma.

COL3A1 KRT72 KRT1 KRT3 RBM15 KRT9 EPPK1 COL17A1 KRT17 SYNM RPS2 LARP1 MAP7 KRT79 VIRMA HNRNPA2B1 ZCCHC3 DDX3X HNRNPU SAFB FAM120A PRPF4 AFG3L2 SAFB2 ALYREF LZTS2 LSM14B

1.42e-1012571722736526897
Pubmed

SND1 binds SARS-CoV-2 negative-sense RNA and promotes viral RNA synthesis through NSP9.

RBM15 EIF4H RPS2 LARP1 HNRNPA2B1 ZCCHC3 DDX3X CIRBP MEX3A FAM120A SAFB2 ALYREF FUBP3

6.22e-102581721337794589
Pubmed

KCTD13-mediated ubiquitination and degradation of GluN1 regulates excitatory synaptic transmission and seizure susceptibility.

KRT72 KRT1 EPB41L4B RPS2 LARP1 SRCIN1 HNRNPA1L2 MAP7 ECI1 GRM5 KRT79 VIRMA ERBIN HNRNPA2B1 JMY HNRNPU USP31 SAFB KRT76 FAM120A INA NRXN2 AFG3L2 OSBPL10 SYN1 ERC2 TSC22D4

2.37e-0914311722737142655
Pubmed

The mRNA-bound proteome and its global occupancy profile on protein-coding transcripts.

RBM15 EPPK1 EIF4H RPS2 RBM3 LARP1 VIRMA HNRNPA2B1 ZCCHC3 DDX3X HNRNPU CIRBP SAFB MEX3A FAM120A SAFB2 ALYREF LSM14B FUBP3 MEX3B

3.98e-098071722022681889
Pubmed

PRISMA and BioID disclose a motifs-based interactome of the intrinsically disordered transcription factor C/EBPα.

SIN3B RBM15 TCF20 EIF4H RBM3 MSANTD2 LARP1 HNRNPA2B1 DDX3X HNRNPU CIRBP PCF11 LENG8 ZC3H10 SAFB FAM120A PRPF4 SAFB2 ALYREF MLLT6 LSM14B ZBTB3 FUBP3

6.55e-0911031722334189442
Pubmed

RNF208, an estrogen-inducible E3 ligase, targets soluble Vimentin to suppress metastasis in triple-negative breast cancers.

KRT72 KRT1 KRT3 KRT9 KRT17 KRT74 KRT76

1.37e-0857172731862882
Pubmed

RNA-binding proteins with basic-acidic dipeptide (BAD) domains self-assemble and aggregate in Alzheimer's disease.

RBM15 RPS2 RBM3 LARP1 HNRNPA2B1 ZCCHC3 DDX3X HNRNPU CIRBP SAFB FAM120A CLPB PRPF4 SAFB2 ALYREF LSM14B FUBP3 TUBAL3

1.89e-087131721829802200
Pubmed

Human transcription factor protein interaction networks.

SIN3B TCF20 KRT74 MSANTD2 LARP1 MAP7 FOXA1 ERBIN RFXAP ZCCHC3 RING1 CIRBP PCF11 HOXA5 LENG8 FAM120A ZBTB10 AUTS2 SP9 MLLT6 LSM14B EN1 FUBP3 PCDH7 INO80B

4.31e-0814291722535140242
Pubmed

A central chaperone-like role for 14-3-3 proteins in human cells.

RBM15 TCF20 KCTD8 LARP1 PLEKHG2 MAP7 ZNRF2 VIRMA ERBIN DDX3X C6orf132 USP31 INA KCNQ5 FAM171A2 OSBPL10 TSC22D4 PCDH7 MEX3B

6.23e-088611721936931259
Pubmed

BPA modulates the WDR5/TET2 complex to regulate ERβ expression in eutopic endometrium and drives the development of endometriosis.

KRT1 RBM15 KRT9 EPPK1 KRT17 RPS2 LARP1 ERMP1 HNRNPA2B1 ZCCHC3 DDX3X HNRNPU RING1 CIRBP PRPF4 ALYREF FUBP3

1.04e-077111721733022573
Pubmed

High-throughput analyses of hnRNP H1 dissects its multi-functional aspect.

EMC7 TCF20 EIF4H HOXB-AS3 LARP1 ERMP1 HACD2 TERF2 HNRNPA2B1 DDX3X HNRNPU RING1 PCF11 CACNG8 MLLT6 LSM14B SRRM3 OGA FUBP3 SPRN

1.87e-0710211722026760575
Pubmed

A Noncanonical Role of Fructose-1, 6-Bisphosphatase 1 Is Essential for Inhibition of Notch1 in Breast Cancer.

KRT72 KRT1 KRT9 KRT17 RPS2 HNRNPA2B1 DDX3X HNRNPU CIRBP SAFB FAM120A

2.10e-072861721132041737
Pubmed

TRIM28-mediated nucleocapsid protein SUMOylation enhances SARS-CoV-2 virulence.

KRT1 KRT9 KRT17 RPS2 RBM3 LARP1 HNRNPA2B1 DDX3X HNRNPU CIRBP SAFB SAFB2 ALYREF

2.59e-074301721338172120
Pubmed

The Nse5/6-like SIMC1-SLF2 complex localizes SMC5/6 to viral replication centers.

RBM15 ATP5IF1 SALL3 TCF20 RBM3 LARP1 HNRNPA1L2 HNRNPA2B1 DDX3X HNRNPU PCF11 LENG8 SAFB PRPF4 SAFB2 ALYREF MLLT6 FUBP3 INO80B

3.01e-079541721936373674
Pubmed

Identifying and quantifying in vivo methylation sites by heavy methyl SILAC.

RBM3 HNRNPA2B1 HNRNPU FAM120A ALYREF

3.60e-0730172515782174
Pubmed

CHD3 and CHD4 form distinct NuRD complexes with different yet overlapping functionality.

KRT1 KRT3 RBM15 KRT9 KRT17 RPS2 LARP1 VIRMA HNRNPA2B1 DDX3X HNRNPU SAFB FAM120A PRPF4 ALYREF

3.85e-076051721528977666
Pubmed

Interactome analysis of the human Cap-specific mRNA (nucleoside-2'-O-)-methyltransferase 1 (hMTr1) protein.

RPS2 LARP1 HNRNPA2B1 DDX3X HNRNPU CIRBP FAM120A ALYREF

4.67e-07138172830320910
Pubmed

Interactions between epiplakin and intermediate filaments.

KRT1 EPPK1 DES

4.74e-074172316923132
Pubmed

New roles for the de-ubiquitylating enzyme OTUD4 in an RNA-protein network and RNA granules.

SLC25A46 TENT4A LARP1 HNRNPA1L2 HNRNPA2B1 PLPP6 PLEKHH3 HNRNPU LENG8 KRT24 FAM120A ALYREF CTU1

5.83e-074621721331138677
Pubmed

Arginine methylation and ubiquitylation crosstalk controls DNA end-resection and homologous recombination repair.

RBM15 RPS2 LARP1 MAP7 HNRNPA2B1 ZCCHC3 DDX3X HNRNPU SAFB FAM120A INA ALYREF LSM14B FUBP3

7.15e-075511721434728620
Pubmed

Characterizing ZC3H18, a Multi-domain Protein at the Interface of RNA Production and Destruction Decisions.

RBM15 RPS2 RBM3 LARP1 VIRMA HNRNPA2B1 ZCCHC3 HNRNPU CIRBP LENG8 SAFB PRPF4 SAFB2 ALYREF LSM14B FUBP3

8.08e-077311721629298432
Pubmed

RNF43 inhibits WNT5A-driven signaling and suppresses melanoma invasion and resistance to the targeted therapy.

SIN3B TCF20 EPB41L4B SYNM ERBIN HNRNPA2B1 C6orf132 LENG8 LZTS2 FUBP3

8.43e-072631721034702444
Pubmed

Charting the molecular network of the drug target Bcr-Abl.

KRT1 KRT3 KRT9 KRT17 KRT79 DDX3X HNRNPU KRT76 KRT24 TUBAL3

9.34e-072661721019380743
Pubmed

RC3H1 post-transcriptionally regulates A20 mRNA and modulates the activity of the IKK/NF-κB pathway.

KRT9 RPS2 RBM3 LARP1 MAP7 HNRNPA2B1 HNRNPU CIRBP

1.18e-06156172826170170
Pubmed

mTORC1 activity regulates post-translational modifications of glycine decarboxylase to modulate glycine metabolism and tumorigenesis.

TCF20 LARP1 MAP7 HNRNPA2B1 DDX3X HNRNPU SAFB FAM120A FUBP3 PCDH7

1.22e-062741721034244482
Pubmed

Characterization of gene regulation and protein interaction networks for Matrin 3 encoding mutations linked to amyotrophic lateral sclerosis and myopathy.

EPPK1 RPS2 HNRNPA2B1 DDX3X HNRNPU SAFB FUBP3

1.25e-06109172729511296
Pubmed

The E3 ubiquitin ligase HECTD1 contributes to cell proliferation through an effect on mitosis.

SAMD1 RBM15 RPS2 LARP1 PDCD7 TERF2 VIRMA HNRNPA2B1 ZCCHC3 HNRNPU FAM120A PRPF4 SAFB2 ERC2 ALYREF MTCH1

1.32e-067591721635915203
Pubmed

hnRNPA1 couples nuclear export and translation of specific mRNAs downstream of FGF-2/S6K2 signalling.

KRT1 KRT9 EPPK1 KRT17 RPS2 LARP1 KRT79 HNRNPA2B1 DDX3X HNRNPU FAM120A

1.37e-063461721125324306
Pubmed

Loss of TRIM31 promotes breast cancer progression through regulating K48- and K63-linked ubiquitination of p53.

KRT72 KRT1 KRT9 RPS2 LARP1 HNRNPA2B1 ZCCHC3 DDX3X HNRNPU FAM120A ALYREF TUBAL3

1.40e-064211721234650049
Pubmed

PTPN14 regulates Roquin2 stability by tyrosine dephosphorylation.

KRT1 RBM15 KRT9 KRT17 RPS2 RBM3 LARP1 HNRNPA2B1 ZCCHC3 DDX3X HNRNPU FAM120A PRPF4 ALYREF FUBP3

1.59e-066781721530209976
Pubmed

Identification of FUBP1 as a Long Tail Cancer Driver and Widespread Regulator of Tumor Suppressor and Oncogene Alternative Splicing.

RBM15 RPS2 LARP1 VIRMA HNRNPA2B1 DDX3X SAFB

1.69e-06114172731553912
Pubmed

Large-scale characterization of HeLa cell nuclear phosphoproteins.

SEC16B NR2F6 RBM15 TCF20 LARP1 TERF2 VIRMA ERBIN HNRNPA2B1 REXO1 PCF11 SAFB SAFB2 OGA PCDH7 UNC5D

1.69e-067741721615302935
Pubmed

The SARS-CoV-2 RNA interactome.

EIF4H RBM3 LARP1 FAM120A SAFB2 FUBP3

1.88e-0674172633989516
Pubmed

MECP2 directly interacts with RNA polymerase II to modulate transcription in human neurons.

KRT1 RBM15 KRT9 GALC TCF20 RPS2 PDCD7 HNRNPA2B1 DDX3X HNRNPU CIRBP PCF11 SAFB INA NRXN2 PRPF4 PGRMC2 SAFB2 MTCH1

1.95e-0610821721938697112
Pubmed

Recruitment of the human TREX complex to mRNA during splicing.

RBM15 VIRMA DDX3X ALYREF

2.63e-0620172415998806
Pubmed

Elucidation of the 14-3-3ζ interactome reveals critical roles of RNA-splicing factors during adipogenesis.

COL3A1 EPPK1 HNRNPA1L2 HNRNPA2B1 DDX3X FAM120A ALYREF

2.66e-06122172729530978
Pubmed

In-Depth In Vivo Crosslinking in Minutes by a Compact, Membrane-Permeable, and Alkynyl-Enrichable Crosslinker.

KRT72 KRT1 KRT3 KRT17 KRT74 LARP1 HNRNPA1L2 KRT79 TERF2 ERBIN HNRNPA2B1 HNRNPU GSR RING1 PCF11 DES SAFB KRT76 INA SAFB2 ERC2 FUBP3

2.88e-0614421722235575683
Pubmed

A Mass Spectrometry-Based Profiling of Interactomes of Viral DDB1- and Cullin Ubiquitin Ligase-Binding Proteins Reveals NF-κB Inhibitory Activity of the HIV-2-Encoded Vpx.

KRT1 KRT9 KRT17 DDX3X HNRNPU

2.91e-0645172530619335
Pubmed

Anticancer sulfonamides target splicing by inducing RBM39 degradation via recruitment to DCAF15.

RPS2 LARP1 HNRNPA1L2 HNRNPA2B1 ZCCHC3 HNRNPU DES SAFB FAM120A INA PRPF4 SAFB2 ALYREF FUBP3 TUBAL3

2.98e-067141721528302793
Pubmed

Matrix-screening reveals a vast potential for direct protein-protein interactions among RNA binding proteins.

RBM15 EIF4H RPS2 RBM3 LARP1 HNRNPA1L2 MAP7 DDX3X HNRNPU RING1 CIRBP ZC3H10 FAM120A SRRM3 FUBP3

3.47e-067231721534133714
Pubmed

Identifying biological pathways that underlie primordial short stature using network analysis.

RBM15 EPPK1 TCF20 KRT17 EIF4H RPS2 ZNRF2 HNRNPA2B1 DDX3X HNRNPU SAFB INA PRPF4 PGRMC2 AFG3L2 SAFB2 ALYREF FUBP3

3.64e-0610241721824711643
Pubmed

Neuron-specific protein network mapping of autism risk genes identifies shared biological mechanisms and disease-relevant pathologies.

ATP5IF1 EMC4 HCN4 RPS2 SRCIN1 ECI1 GRM5 ERBIN HNRNPU CACNG8 AMER2 SAFB INA KCNQ5 FAM171A2 AFG3L2 MTCH1 SHISA6 JPH3

4.09e-0611391721936417873
Pubmed

Detecting rare variants for complex traits using family and unrelated data.

HJV CDKN2B EIF4H

4.10e-067172319847924
Pubmed

Genes for intermediate filament proteins and the draft sequence of the human genome: novel keratin genes and a surprisingly high number of pseudogenes related to keratin genes 8 and 18.

SYNM KRT74 KRT79

4.10e-067172311683385
Pubmed

HDLBP Promotes Hepatocellular Carcinoma Proliferation and Sorafenib Resistance by Suppressing Trim71-dependent RAF1 Degradation.

KRT1 SEC16B RBM15 EMC7 RBMXL3 RBM3 LARP1 PDCD7 VIRMA HNRNPA2B1 RING1 CIRBP PCF11 LENG8 FAM120A CLPB PGRMC2 ALYREF LZTS2 LSM14B FUBP3

4.64e-0613711722136244648
Pubmed

Combinatorial targeting of a chromatin complex comprising Dot1L, menin and the tyrosine kinase BAZ1B reveals a new therapeutic vulnerability of endocrine therapy-resistant breast cancer.

RBM15 RPS2 LARP1 HACD2 HNRNPA2B1 DDX3X HNRNPU CIRBP PCF11 SAFB FAM120A PRPF4 SAFB2 ZBTB10 FUBP3 INO80B

5.32e-068471721635850772
Pubmed

TBK1 phosphorylation activates LIR-dependent degradation of the inflammation repressor TNIP1.

KRT1 SAMD1 RBM15 EPPK1 EPB41L4B RPS2 LARP1 HNRNPA1L2 MAP7 HNRNPA2B1 DDX3X HNRNPU SAFB FAM120A SAFB2 ALYREF TUBAL3

5.38e-069491721736574265
Pubmed

Interaction of Tumor Necrosis Factor Receptor-associated Factor 6 (TRAF6) and Vav3 in the Receptor Activator of Nuclear Factor κB (RANK) Signaling Complex Enhances Osteoclastogenesis.

KRT1 KRT3 KRT9 DDX3X

5.68e-0624172427507811
Pubmed

Immunoaffinity profiling of tyrosine phosphorylation in cancer cells.

TCF20 EIF4H ERBIN ZCCHC3 DDX3X HNRNPU GSR REXO2 FAM120A PCDH7

5.87e-063271721015592455
Pubmed

Cleavage and polyadenylation specificity factor 1 (CPSF1) regulates alternative splicing of interleukin 7 receptor (IL7R) exon 6.

RBM3 DDX3X HNRNPU CIRBP SAFB ALYREF

5.92e-0690172623151878
Pubmed

Integrative genomics positions MKRN1 as a novel ribonucleoprotein within the embryonic stem cell gene regulatory network.

LARP1 HNRNPA1L2 HNRNPA2B1 DDX3X HNRNPU

6.01e-0652172526265008
Pubmed

Elucidation of the BMI1 interactome identifies novel regulatory roles in glioblastoma.

EIF4H PLEKHA4 LARP1 KRT79 RING1 KRT76 FAM120A ALYREF LSM14B FUBP3

6.20e-063291721034316702
Pubmed

Spatiotemporal profile of postsynaptic interactomes integrates components of complex brain disorders.

SIN3B PDE4A TCF20 HCN4 MSANTD2 GRM5 VIRMA ERBIN DDX3X HNRNPU FAM120A INA FAM171A2 SAFB2 SYN1 ERC2 ALYREF

6.51e-069631721728671696
Pubmed

Interaction of two multifunctional proteins. Heterogeneous nuclear ribonucleoprotein K and Y-box-binding protein.

RBM3 HNRNPU SAFB

6.54e-068172310809782
Pubmed

H4K20me0 recognition by BRCA1-BARD1 directs homologous recombination to sister chromatids.

SAMD1 SIN3B RBM15 TCF20 RPS2 RBM3 E4F1 MAP7 TERF2 RFXAP HNRNPA2B1 DDX3X HNRNPU RING1 SAFB PRPF4 AFG3L2 SAFB2 ALYREF FUBP3

6.97e-0612941722030804502
Pubmed

LukS-PV inhibits hepatocellular carcinoma cells migration by downregulating HDAC6 expression.

KRT1 KRT9 EPPK1 KRT17 RPS2 LARP1 MAP7 HNRNPA2B1 DDX3X HNRNPU DES KRT24 FAM120A

7.02e-065801721335676659
Pubmed

The nuclear transcription factor RARalpha associates with neuronal RNA granules and suppresses translation.

RBM3 DDX3X HNRNPU DES ALYREF

7.25e-0654172518495661
Pubmed

ARIH2 Is a Vif-Dependent Regulator of CUL5-Mediated APOBEC3G Degradation in HIV Infection.

KRT72 KRT1 KRT9 RPS2 HNRNPA2B1 DDX3X HNRNPU CIRBP ALYREF TSC22D4

7.45e-063361721031253590
Pubmed

RSPO-LGR4 functions via IQGAP1 to potentiate Wnt signaling.

KRT1 KRT9 KRT79 VIRMA DDX3X HNRNPU SAFB LSM14B

8.05e-06202172824639526
Pubmed

Disruption of the lamin A and matrin-3 interaction by myopathic LMNA mutations.

RPS2 HNRNPA1L2 HNRNPA2B1 DDX3X HNRNPU ALYREF

8.60e-0696172625948554
Pubmed

Characterization of new members of the human type II keratin gene family and a general evaluation of the keratin gene domain on chromosome 12q13.13.

KRT3 KRT79 KRT76

9.77e-069172315737194
Pubmed

A genome-wide in situ hybridization map of RNA-binding proteins reveals anatomically restricted expression in the developing mouse brain.

RBM15 RBMXL3 RBM3 HNRNPA1L2 CIRBP SAFB MEX3A AFG3L2 ALYREF FUBP3

9.85e-063471721016033648
Pubmed

Cell cycle-dependent phosphorylation regulates RECQL4 pathway choice and ubiquitination in DNA double-strand break repair.

RPS2 LARP1 HNRNPA1L2 HNRNPA2B1 DDX3X HNRNPU RING1 CIRBP HOXA5 FAM120A INA CLPB PRPF4 TTLL11 AFG3L2 ZBTB10 ALYREF LSM14B FUBP3 TUBAL3

1.10e-0513351722029229926
Pubmed

Proteomic analysis of the cullin 4B interactome using proximity-dependent biotinylation in living cells.

RBMXL3 RBM3 ERBIN CIRBP SAFB SAFB2 ALYREF

1.18e-05153172728225217
Pubmed

Stage- and subunit-specific functions of polycomb repressive complex 2 in bladder urothelial formation and regeneration.

CDKN2B KRT1 KRT17 FOXA1

1.25e-0529172428049658
Pubmed

Comprehensive interactome profiling of the human Hsp70 network highlights functional differentiation of J domains.

EMC7 EIF4H EMC4 SYNM DNAJB8 MAP7 ERBIN HNRNPA2B1 GSR PCF11 USP31 FAM120A FAM171A2 CLPB PGRMC2 AFG3L2 ALAS1 LZTS2 TSC22D4 OGA PCDH7

1.58e-0514871722133957083
Pubmed

Assessment of community efforts to advance network-based prediction of protein-protein interactions.

KRT72 KRT1 KRT3 KRT26 EMC7 KRT74 ERMP1 KRT79 RING1 KRT76 KRT24 PGRMC2 SHISA6

1.68e-056301721336949045
Pubmed

The RNA-mediated estrogen receptor α interactome of hormone-dependent human breast cancer cell nuclei.

SAMD1 SIN3B RBM3 E4F1 ERMP1 HACD2 MAP7 PDCD7 TERF2 VIRMA ERBIN PLPP6 C6orf132 CIRBP PCF11 LENG8 CLPB AFG3L2 LZTS2 LSM14B INO80B

1.74e-0514971722131527615
Pubmed

Impact of cytosine methylation on DNA binding specificities of human transcription factors.

SCRT2 NR2F6 SOX8 TEF FOXA1 HOXA5 SKOR1 SP9 VAX2 ONECUT3 DMRT1 EN1

1.87e-055441721228473536
Pubmed

Comparative Proteomics and Interactome Analysis of the SARS-CoV-2 Nucleocapsid Protein in Human and Bat Cell Lines.

RPS2 LARP1 HNRNPA2B1 DDX3X HNRNPU FAM120A ALYREF

2.17e-05168172739066279
Pubmed

Proteomic characterization of chromosomal common fragile site (CFS)-associated proteins uncovers ATRX as a regulator of CFS stability.

KRT1 RBM15 EPPK1 KRT17 RPS2 RBM3 HNRNPA2B1 DDX3X HNRNPU SAFB SAFB2 ALYREF FUBP3

2.40e-056521721331180492
Pubmed

Scaffold attachment factors SAFB1 and SAFB2: Innocent bystanders or critical players in breast tumorigenesis?

SAFB SAFB2

2.43e-052172214587024
Pubmed

Cotranscriptional recruitment of the mRNA export factor Yra1 by direct interaction with the 3' end processing factor Pcf11.

PCF11 ALYREF

2.43e-052172219110458
Pubmed

IGFBP2 induces podocyte apoptosis promoted by mitochondrial damage via integrin α5/FAK in diabetic kidney disease.

ITGA5 IGFBP2

2.43e-052172238796567
Pubmed

Protein interactions among the vaccinia virus late transcription factors.

RBM3 HNRNPA2B1

2.43e-052172215518812
Pubmed

Molecular cloning and functional expression of a cDNA encoding a new member of mixed lineage protein kinase from human brain.

MAP3K12 MAP3K13

2.43e-05217229353328
Pubmed

Down-regulating cold shock protein genes impairs cancer cell survival and enhances chemosensitivity.

RBM3 CIRBP

2.43e-052172219277990
Pubmed

Impaired regenerative response of primary sensory neurons in ZPK/DLK gene-trap mice.

MAP3K12 MAP3K13

2.43e-052172219358824
Pubmed

Scaffold attachment factor B (SAFB)1 and SAFB2 cooperatively inhibit the intranuclear mobility and function of ERα.

SAFB SAFB2

2.43e-052172222566185
Pubmed

SAFB1 mediates repression of immune regulators and apoptotic genes in breast cancer cells.

SAFB SAFB2

2.43e-052172219901029
Pubmed

An interaction between insulin-like growth factor-binding protein 2 (IGFBP2) and integrin alpha5 is essential for IGFBP2-induced cell mobility.

ITGA5 IGFBP2

2.43e-052172216569642
Pubmed

IGFBP2/ITGA5 promotes gefitinib resistance via activating STAT3/CXCL1 axis in non-small cell lung cancer.

ITGA5 IGFBP2

2.43e-052172238918360
Pubmed

Oxygen-regulated expression of the RNA-binding proteins RBM3 and CIRP by a HIF-1-independent mechanism.

RBM3 CIRBP

2.43e-052172215075239
Pubmed

Chronic social stress blunts core body temperature and molecular rhythms of Rbm3 and Cirbp in mouse lateral habenula.

RBM3 CIRBP

2.43e-052172237463657
Pubmed

No germline mutations in supposed tumour suppressor genes SAFB1 and SAFB2 in familial breast cancer with linkage to 19p.

SAFB SAFB2

2.43e-052172219077293
Pubmed

Low SAFB levels are associated with worse outcome in breast cancer patients.

SAFB SAFB2

2.43e-052172219137425
Pubmed

Selective EMC subunits act as molecular tethers of intracellular organelles exploited during viral entry.

EMC7 EMC4

2.43e-052172232111841
Pubmed

Leucine Zipper-bearing Kinase promotes axon growth in mammalian central nervous system neurons.

MAP3K12 MAP3K13

2.43e-052172227511108
Pubmed

Unravelling the RNA-Binding Properties of SAFB Proteins in Breast Cancer Cells.

SAFB SAFB2

2.43e-052172226273616
Pubmed

Effects of moderate and deep hypothermia on RNA-binding proteins RBM3 and CIRP expressions in murine hippocampal brain slices.

RBM3 CIRBP

2.43e-052172223415676
Pubmed

Scaffold attachment factor B2 (SAFB2)-null mice reveal non-redundant functions of SAFB2 compared with its paralog, SAFB1.

SAFB SAFB2

2.43e-052172226092125
Pubmed

Expression of RNA-binding Motif Protein 3 (RBM3) and Cold-inducible RNA-binding protein (CIRP) Is Associated with Improved Clinical Outcome in Patients with Colon Cancer.

RBM3 CIRBP

2.43e-052172228373441
Pubmed

Beads-free protein immunoprecipitation for a mass spectrometry-based interactome and posttranslational modifications analysis.

RBM3 HNRNPA1L2 HNRNPA2B1 DDX3X HNRNPU SAFB FAM120A

2.52e-05172172726336360
Pubmed

EWSR1-induced circNEIL3 promotes glioma progression and exosome-mediated macrophage immunosuppressive polarization via stabilizing IGF2BP3.

KRT17 RPS2 HNRNPA2B1 HNRNPU CIRBP FAM120A ALYREF

2.71e-05174172735031058
Pubmed

In silico APC/C substrate discovery reveals cell cycle-dependent degradation of UHRF1 and other chromatin regulators.

SCRT2 RBM15 KRT17 RBM3 LARP1 HNRNPA1L2 HNRNPA2B1 ZCCHC3 DDX3X HNRNPU CIRBP FAM120A PRPF4 ERC2 ALYREF LSM14B

2.84e-059711721633306668
Pubmed

Characterization of staufen1 ribonucleoproteins by mass spectrometry and biochemical analyses reveal the presence of diverse host proteins associated with human immunodeficiency virus type 1.

RPS2 HNRNPA2B1 DDX3X HNRNPU SAFB FAM120A INA ALYREF

2.87e-05241172823125841
Pubmed

ATPase-Modulated Stress Granules Contain a Diverse Proteome and Substructure.

EPPK1 EIF4H LARP1 DDX3X MEX3A FAM120A SAFB2 LSM14B FUBP3

2.96e-05315172926777405
InteractionKRT17 interactions

KRT72 KRT1 KRT9 PDE4A KRT17 EMC4 KRT27 RPS2 KRT79 VIRMA HNRNPA2B1 DDX3X HNRNPU DES KRT76 TTLL11 FUBP3 PCDH7

4.38e-1225216918int:KRT17
InteractionKRT14 interactions

KRT72 KRT1 KRT3 EPPK1 KRT17 EMC4 HNRNPA1L2 KRT79 VIRMA DDX3X HNRNPU DES KRT76 INA

8.88e-1019216914int:KRT14
InteractionKRT8 interactions

KRT72 KRT1 KRT3 KRT26 EPPK1 KRT17 SYNM KRT27 KRT74 MAP7 KRT79 VIRMA NAGS DES KRT76 KRT24 INA LZTS2 PCDH7

5.94e-0944116919int:KRT8
InteractionKRT26 interactions

KRT72 KRT1 KRT3 KRT26 KRT74 KRT79 KRT76

1.42e-08351697int:KRT26
InteractionPRPH interactions

KRT72 KRT1 KRT3 KRT17 EIF4H SYNM KRT27 HNRNPU C6orf132 DES KRT76 KRT24 INA

1.84e-0820416913int:PRPH
InteractionKRT72 interactions

KRT72 KRT26 EPPK1 KRT17 KRT27 DES KRT24 INA

3.19e-08591698int:KRT72
InteractionKRT13 interactions

KRT72 KRT1 KRT3 KRT17 KRT74 FOXA1 KRT79 DDX3X DES KRT76

5.00e-0811616910int:KRT13
InteractionKRT5 interactions

KRT72 KRT1 KRT3 KRT17 KRT27 KRT74 KRT79 VIRMA DDX3X DES KRT76 KRT24

8.66e-0819316912int:KRT5
InteractionKRT16 interactions

KRT72 KRT1 KRT3 KRT17 EMC4 KRT74 KRT79 VIRMA DDX3X DES KRT76 INA

1.08e-0719716912int:KRT16
InteractionKRT84 interactions

KRT72 KRT3 KRT17 KRT74 KRT79 DES KRT76

1.64e-07491697int:KRT84
InteractionFAM120A interactions

RPS2 RBM3 PLEKHA4 LARP1 MAP7 VIRMA HNRNPA2B1 ZCCHC3 DDX3X HNRNPU FAM120A ALYREF MAP3K13 FUBP3 MEX3B

2.66e-0734916915int:FAM120A
InteractionHNRNPA1 interactions

KRT1 RBM15 KRT9 EPPK1 KRT17 RBM3 PLEKHA4 LARP1 HNRNPA1L2 KRT79 HNRNPA2B1 ZCCHC3 DDX3X HNRNPU CIRBP PCF11 LENG8 SAFB FAM120A PRPF4 SAFB2 ALYREF TSC22D4 FUBP3 PCDH7

3.44e-0794516925int:HNRNPA1
InteractionKRT7 interactions

KRT72 KRT1 EPPK1 KRT17 KRT27 VIRMA KRT76 INA

3.59e-07801698int:KRT7
InteractionKRT75 interactions

KRT72 KRT1 KRT3 KRT26 EPPK1 KRT17 KRT27 KRT79 DES KRT76 KRT24

3.82e-0718116911int:KRT75
InteractionKRT25 interactions

KRT72 KRT1 KRT3 KRT74 KRT79 KRT76

4.22e-07351696int:KRT25
InteractionFMR1 interactions

SIN3B TCF20 PLEKHA4 LARP1 MAP7 VIRMA HNRNPA2B1 DDX3X HNRNPU CIRBP MEX3A FAM120A INA FAM171A2 SAFB2 ZBTB3 FUBP3 MEX3B

6.29e-0753616918int:FMR1
InteractionHEXIM1 interactions

KRT72 KRT1 KRT3 KRT26 KRT9 KRT17 KRT27 RPS2 KRT74 PLEKHA4 HNRNPA1L2 MAP7 KRT79 TERF2 HNRNPA2B1 DDX3X HNRNPU CIRBP KRT76 KRT24 PRPF4 ALYREF LSM14B TUBAL3

6.79e-0791316924int:HEXIM1
InteractionKRT19 interactions

KRT72 KRT1 KRT3 KRT17 EMC4 SYNM KRT74 KRT79 DES KRT76 INA MLLT6 LZTS2

7.86e-0728216913int:KRT19
InteractionKRT20 interactions

KRT72 KRT3 KRT27 KRT79 DES KRT76 KRT24

9.60e-07631697int:KRT20
InteractionKRT6A interactions

KRT72 KRT3 KRT26 KRT17 KRT27 KRT74 KRT79 DDX3X DES KRT76

1.02e-0616016910int:KRT6A
InteractionKRT33B interactions

KRT72 KRT1 KRT3 EPPK1 KRT74 KRT79 DES KRT76

1.15e-06931698int:KRT33B
InteractionMYCN interactions

KRT1 RBM15 KRT9 TCF20 KRT17 RPS2 RBM3 LARP1 POLR2M HNRNPA1L2 MAP7 VIRMA HNRNPA2B1 ZCCHC3 DDX3X HNRNPU RING1 CIRBP LENG8 ZC3H10 SAFB MEX3A FAM120A INA SAFB2 ALYREF LSM14B FUBP3 MEX3B INO80B

1.19e-06137316930int:MYCN
InteractionINPPL1 interactions

BORCS6 KRT1 KRT3 KRT9 KRT17 POLR2M KRT79 DDX3X HNRNPU AFG3L2 MAP3K13

2.00e-0621416911int:INPPL1
InteractionKRT37 interactions

KRT72 KRT1 KRT3 KRT74 KRT79 RUFY1 DES KRT76

2.00e-061001698int:KRT37
InteractionLARP7 interactions

KRT1 KRT3 KRT26 KRT9 PDE4A RBMXL3 KRT17 KRT27 RPS2 RBM3 LARP1 E4F1 HNRNPA1L2 MAP7 KRT79 TERF2 HNRNPA2B1 ZCCHC3 DDX3X HNRNPU CIRBP KRT76 FAM120A PRPF4 ALYREF TUBAL3

2.03e-06111316926int:LARP7
InteractionPRMT8 interactions

RBM3 PLEKHA4 DDX3X HNRNPU CIRBP FAM120A INA ALYREF

2.69e-061041698int:PRMT8
InteractionKRT36 interactions

KRT72 KRT1 KRT3 KRT74 KRT79 KRT76 MYOZ1

2.89e-06741697int:KRT36
InteractionRNF208 interactions

KRT72 KRT1 KRT3 KRT9 KRT17 KRT74 KRT76

3.16e-06751697int:RNF208
InteractionSNRPA interactions

RBM15 RBM3 PLEKHA4 TERF2 VIRMA HNRNPA2B1 DDX3X HNRNPU CIRBP PCF11 LENG8 ZC3H10 SAFB PRPF4 SAFB2 ALYREF

3.17e-0648216916int:SNRPA
InteractionALG13 interactions

TCF20 DDX3X RING1 PCF11 LENG8 ZC3H10 FAM120A LZTS2 FUBP3 MEX3B

3.42e-0618316910int:ALG13
InteractionRC3H2 interactions

KRT1 RBM15 KRT9 KRT17 RPS2 RBM3 LARP1 VIRMA HNRNPA2B1 ZCCHC3 DDX3X HNRNPU MEX3A FAM120A PRPF4 AFG3L2 ALYREF FUBP3 MEX3B

3.46e-0666716919int:RC3H2
InteractionKRT28 interactions

KRT72 KRT1 KRT3 KRT79 KRT76

4.70e-06301695int:KRT28
InteractionPAIP2B interactions

RBM3 LARP1 ZCCHC3 CIRBP FAM120A ALYREF

4.71e-06521696int:PAIP2B
InteractionMCAT interactions

RBM3 PLEKHA4 POLR2M HNRNPU CIRBP FAM120A ALYREF ALAS1

5.36e-061141698int:MCAT
InteractionKRT24 interactions

KRT72 KRT1 KRT3 KRT74 KRT79 KRT24

5.89e-06541696int:KRT24
InteractionCAND1 interactions

COL3A1 KRT1 KRT9 RPS2 RBM3 PLEKHA4 LARP1 RUFY1 VIRMA HNRNPA2B1 ZCCHC3 DDX3X HNRNPU CIRBP LENG8 ZC3H10 KRT76 FAM120A PRPF4 SAFB2 ALYREF FUBP3

5.98e-0689416922int:CAND1
InteractionFUBP3 interactions

KRT17 PLEKHA4 FOXA1 HNRNPA2B1 ZCCHC3 DDX3X MEX3A FAM120A ZBTB10 LSM14B FUBP3 MEX3B

8.16e-0629716912int:FUBP3
InteractionKRT27 interactions

KRT72 KRT1 KRT3 EPPK1 KRT17 KRT27 KRT74 KRT79 KRT76 INA

8.22e-0620216910int:KRT27
InteractionKRT78 interactions

KRT26 EPPK1 KRT17 KRT27 DDX3X KRT24 INA

8.56e-06871697int:KRT78
InteractionKRT3 interactions

KRT3 KRT26 EPPK1 KRT27 HNRNPU DES KRT24

9.24e-06881697int:KRT3
InteractionPRMT1 interactions

RBM15 RPS2 RBM3 PLEKHA4 LARP1 MAP7 TERF2 RUFY1 VIRMA HNRNPA2B1 ZCCHC3 DDX3X HNRNPU CIRBP SAFB FAM120A INA PRPF4 ALYREF LSM14B FUBP3 MEX3B

1.09e-0592916922int:PRMT1
InteractionMEPCE interactions

KRT1 KRT26 KRT9 KRT17 KRT27 RPS2 RBM3 LARP1 HNRNPA1L2 MAP7 KRT79 HNRNPA2B1 DDX3X HNRNPU CIRBP HOXA5 KRT76 PRPF4 ALYREF LSM14B TUBAL3

1.10e-0585916921int:MEPCE
InteractionKRT18 interactions

KRT72 KRT1 KRT3 EPPK1 COL17A1 KRT17 KRT74 KRT79 VIRMA HNRNPU DES KRT76 INA PCDH7

1.25e-0541916914int:KRT18
InteractionMARF1 interactions

TERF2 VIRMA HNRNPA2B1 DDX3X LZTS2 LSM14B FUBP3 MEX3B

1.26e-051281698int:MARF1
InteractionLSM14A interactions

PLEKHA4 ZCCHC3 DDX3X HNRNPU CIRBP MEX3A FAM120A ZBTB10 LSM14B FUBP3 MEX3B

1.28e-0526016911int:LSM14A
InteractionRNF40 interactions

BORCS6 RBM15 PLEKHA4 ITGA5 TERF2 RUFY1 VIRMA CCDC85A SAFB SAFB2 ALYREF

1.33e-0526116911int:RNF40
InteractionKRT6B interactions

KRT26 KRT17 KRT27 VIRMA DDX3X DES KRT24 PCDH7

1.58e-051321698int:KRT6B
InteractionRC3H1 interactions

KRT1 RBM15 KRT9 RPS2 RBM3 LARP1 MAP7 HNRNPA2B1 ZCCHC3 DDX3X HNRNPU CIRBP MEX3A FAM120A AFG3L2 ALYREF FUBP3 MEX3B

1.62e-0567716918int:RC3H1
InteractionCHD3 interactions

KRT1 KRT3 SIN3B RBM15 KRT9 ATP5IF1 KRT17 RPS2 LARP1 FOXA1 VIRMA HNRNPA2B1 DDX3X HNRNPU SAFB MEX3A FAM120A PRPF4 ALYREF

2.07e-0575716919int:CHD3
InteractionYWHAQ interactions

KRT1 KRT9 EPPK1 KRT17 PLEKHA4 LARP1 MAP7 RUFY1 ZNRF2 VIRMA ERBIN MAP3K12 HNRNPA2B1 DDX3X HNRNPU C6orf132 USP31 DES INA KCNQ5 FAM171A2 CLPB PRPF4 PCDH7

2.14e-05111816924int:YWHAQ
InteractionPABPC4 interactions

PLEKHA4 LARP1 TERF2 HNRNPA2B1 DDX3X HNRNPU PCF11 DES MEX3A FAM120A ZBTB10 ALYREF FUBP3 MEX3B

2.26e-0544216914int:PABPC4
InteractionSNRNP70 interactions

RBM15 RPS2 RBM3 PLEKHA4 LARP1 TERF2 VIRMA HNRNPA2B1 ZCCHC3 DDX3X HNRNPU CIRBP DES SAFB FAM120A CLPB PRPF4 SAFB2 ALYREF LSM14B FUBP3 TUBAL3

2.64e-0598416922int:SNRNP70
InteractionEPPK1 interactions

KRT72 KRT3 EPPK1 KRT27 PLEKHA4 VIRMA DDX3X SAFB MEX3A

3.19e-051891699int:EPPK1
InteractionUPF1 interactions

SAMD1 RBM3 PLEKHA4 E4F1 MAP7 ACSS2 ECI1 VIRMA HNRNPA2B1 DDX3X HNRNPU HOXA5 FAM120A ALYREF FUBP3 MEX3B

3.21e-0558116916int:UPF1
InteractionKRT32 interactions

KRT72 KRT3 EPPK1 KRT76 INA

3.26e-05441695int:KRT32
InteractionKRT1 interactions

KRT1 KRT26 KRT9 KRT17 KRT27 VIRMA DDX3X DES KRT24 PCDH7

3.39e-0523816910int:KRT1
InteractionDDX3X interactions

KRT1 KRT9 EPPK1 KRT17 RPS2 PLEKHA4 TERF2 VIRMA ZCCHC3 DDX3X HNRNPU MEX3A FAM120A ALYREF LSM14B FUBP3 PCDH7

3.53e-0565116917int:DDX3X
InteractionMATR3 interactions

EPPK1 KRT27 RPS2 RBM3 LARP1 HNRNPA1L2 ECI1 RUFY1 VIRMA HNRNPA2B1 DDX3X HNRNPU SAFB FAM120A SAFB2 ALYREF FUBP3

3.81e-0565516917int:MATR3
InteractionFLRT1 interactions

VIRMA PCDH17 PLEKHH3 PCDH7 UNC5D

4.06e-05461695int:FLRT1
InteractionKRT35 interactions

KRT72 KRT1 KRT3 KRT27 KRT74 KRT79 KRT76

4.21e-051111697int:KRT35
InteractionIGF2BP2 interactions

RBM3 PLEKHA4 MAP7 VIRMA HNRNPA2B1 ZCCHC3 DDX3X MEX3A FAM120A LSM14B FUBP3 MEX3B

5.01e-0535716912int:IGF2BP2
InteractionALYREF interactions

RBM15 PLEKHA4 MAP7 FOXA1 VIRMA HNRNPA2B1 DDX3X HNRNPU PCF11 FAM120A PRPF4 ALYREF INO80B

5.12e-0541616913int:ALYREF
InteractionCPEB4 interactions

KRT1 VIRMA ZCCHC3 DDX3X MEX3A FAM120A FUBP3 MEX3B

5.24e-051561698int:CPEB4
InteractionUBASH3B interactions

KRT1 KRT9 KRT17 KRT79 VIRMA HNRNPA2B1 HNRNPU LZTS2

5.49e-051571698int:UBASH3B
InteractionDES interactions

KRT72 KRT1 KRT3 KRT17 SYNM DES KRT76 INA

5.74e-051581698int:DES
InteractionABT1 interactions

EPB41L4B RPS2 PLEKHA4 LARP1 E4F1 FOXA1 ZCCHC3 LENG8 ZC3H10 FAM120A PRPF4 LZTS2 SRRM3

6.07e-0542316913int:ABT1
InteractionSEC16A interactions

SLC25A46 PLEKHA4 MAP7 FOXA1 TERF2 VIRMA HNRNPA2B1 MEX3A FAM120A CLPB LZTS2 FUBP3 MEX3B

6.52e-0542616913int:SEC16A
InteractionSMG7 interactions

TCF20 PLEKHA4 DDX3X RING1 PCF11 LENG8 FAM120A MLLT6 LZTS2 FUBP3 MEX3B

8.26e-0531916911int:SMG7
InteractionGLDC interactions

TCF20 PLEKHA4 LARP1 MAP7 HNRNPA2B1 DDX3X HNRNPU SAFB FAM120A FUBP3 PCDH7

8.73e-0532116911int:GLDC
InteractionDDX39B interactions

KRT1 RBM15 KRT9 KRT17 RPS2 VIRMA ERBIN HNRNPA2B1 HNRNPU GSR LENG8 MEX3A PRPF4 ALYREF PCDH7

9.51e-0557016915int:DDX39B
InteractionPHACTR2 interactions

RUFY1 VIRMA SAFB SAFB2

9.62e-05291694int:PHACTR2
InteractionSMC5 interactions

RBM15 ATP5IF1 SALL3 TCF20 RBM3 PLEKHA4 LARP1 HNRNPA1L2 TERF2 HNRNPA2B1 DDX3X HNRNPU PCF11 LENG8 SAFB PRPF4 SAFB2 ALYREF MLLT6 FUBP3 INO80B

9.97e-05100016921int:SMC5
InteractionZCCHC3 interactions

RPS2 RBM3 ZCCHC3 DDX3X FAM120A ZBTB10 FUBP3 MEX3B

9.99e-051711698int:ZCCHC3
InteractionINA interactions

KRT72 KRT27 PLEKHA4 MAP7 HNRNPU DES INA MAP3K13

1.08e-041731698int:INA
InteractionCAPRIN1 interactions

RPS2 LARP1 DNAJB8 VIRMA ZCCHC3 DDX3X CIRBP PCF11 FAM120A ZBTB10 LSM14B FUBP3 MEX3B

1.15e-0445116913int:CAPRIN1
InteractionCEBPA interactions

SIN3B RBM15 TCF20 EIF4H RBM3 MSANTD2 LARP1 SOX8 HNRNPA2B1 DDX3X HNRNPU CIRBP PCF11 LENG8 ZC3H10 SAFB FAM120A PRPF4 SAFB2 ALYREF MLLT6 LSM14B ZBTB3 FUBP3

1.16e-04124516924int:CEBPA
InteractionU2AF2 interactions

EIF4H PLEKHA4 LARP1 TERF2 VIRMA HNRNPA2B1 ZCCHC3 DDX3X HNRNPU PCF11 SAFB PRPF4 ALYREF FUBP3 MEX3B INO80B

1.22e-0465116916int:U2AF2
InteractionKRT39 interactions

KRT1 KRT3 KRT74 KRT76 INA

1.36e-04591695int:KRT39
InteractionKRT79 interactions

KRT26 KRT17 KRT27 KRT79 KRT24

1.36e-04591695int:KRT79
InteractionWDR5 interactions

KRT1 RBM15 KRT9 EPPK1 KRT17 RPS2 PLEKHA4 LARP1 ERMP1 FOXA1 TERF2 HNRNPA2B1 ZCCHC3 DDX3X HNRNPU RING1 CIRBP PRPF4 AUTS2 ALYREF FUBP3 INO80B

1.38e-04110116922int:WDR5
InteractionBMI1 interactions

EIF4H PLEKHA4 LARP1 KRT79 TERF2 VIRMA ZCCHC3 RING1 CIRBP LENG8 KRT76 FAM120A SAFB2 ALYREF LSM14B FUBP3

1.41e-0465916916int:BMI1
InteractionZC3H18 interactions

RBM15 RPS2 RBM3 PLEKHA4 LARP1 TERF2 VIRMA HNRNPA2B1 ZCCHC3 HNRNPU CIRBP LENG8 SAFB PRPF4 SAFB2 OSBPL10 ALYREF LSM14B FUBP3

1.47e-0487716919int:ZC3H18
InteractionCSDE1 interactions

PLEKHA4 VIRMA HNRNPA2B1 ZCCHC3 DDX3X HNRNPU FAM120A LSM14B FUBP3 MEX3B

1.47e-0428416910int:CSDE1
InteractionVIM interactions

KRT72 KRT1 KRT3 EPPK1 KRT17 EIF4H SYNM PLEKHA4 LARP1 RUFY1 VIRMA HNRNPU DES KRT76 INA SYN1 LZTS2 PCDH7

1.48e-0480416918int:VIM
InteractionDOT1L interactions

RBM15 RPS2 LARP1 HACD2 VIRMA HNRNPA2B1 DDX3X HNRNPU CIRBP PCF11 SAFB FAM120A PRPF4 SAFB2 ALYREF MLLT6 FUBP3 INO80B

1.55e-0480716918int:DOT1L
InteractionCEP250 interactions

BORCS6 ATP5IF1 EPPK1 KRT27 RPS2 HNRNPU FAM120A PRPF4 ALYREF LZTS2

1.60e-0428716910int:CEP250
InteractionKRT4 interactions

KRT26 EPPK1 KRT27 DDX3X KRT24

1.72e-04621695int:KRT4
InteractionKRT2 interactions

KRT1 KRT17 EMC4 KRT27 VIRMA DDX3X DES KRT24 INA

1.75e-042361699int:KRT2
InteractionSCN4A interactions

TMPPE SIN3B EMC7 EMC4 ERMP1 ERBIN

1.77e-04981696int:SCN4A
InteractionFBP1 interactions

KRT72 KRT1 KRT9 KRT17 RPS2 HNRNPA2B1 DDX3X HNRNPU CIRBP SAFB FAM120A

1.77e-0434816911int:FBP1
InteractionAGO2 interactions

PLEKHA4 LARP1 VIRMA HNRNPA2B1 ZCCHC3 DDX3X HNRNPU FAM120A ZBTB10 LZTS2 LSM14B FUBP3 MEX3B

1.81e-0447216913int:AGO2
InteractionIL7R interactions

RBM3 DDX3X HNRNPU CIRBP SAFB FAM171A2 ALYREF

1.90e-041411697int:IL7R
InteractionRTL6 interactions

TERF2 VIRMA MEX3A

1.97e-04141693int:RTL6
InteractionCASC3 interactions

RBM3 PLEKHA4 MAP7 MEX3A FAM120A ALYREF MEX3B

1.98e-041421697int:CASC3
InteractionACTG1P20 interactions

PLEKHA4 VIRMA

2.09e-0431692int:ACTG1P20
InteractionMYO9A interactions

PLEKHA4 RASGEF1A POLR2M VIRMA LZTS2 FUBP3

2.09e-041011696int:MYO9A
InteractionOBSL1 interactions

RBM15 EPPK1 TCF20 KRT17 RPS2 PLEKHA4 LTB4R2 HNRNPA2B1 DDX3X HNRNPU GSR CIRBP SAFB INA PRPF4 SAFB2 ERC2 ALYREF FUBP3

2.10e-0490216919int:OBSL1
InteractionMOV10 interactions

NR2F6 EIF4H EMC4 RPS2 RBM3 PLEKHA4 LARP1 E4F1 MAP7 VIRMA ZCCHC3 HNRNPU CIRBP PCF11 GPR161 DES MEX3A FAM120A TTLL11 SAFB2 ALAS1 LSM14B FUBP3 MEX3B

2.15e-04129716924int:MOV10
InteractionG3BP1 interactions

EPPK1 EIF4H RPS2 PLEKHA4 LARP1 VIRMA DDX3X HNRNPU CIRBP SAFB MEX3A FAM120A AFG3L2 SAFB2 ZBTB10 LSM14B FUBP3 MEX3B

2.35e-0483516918int:G3BP1
InteractionWTAP interactions

BORCS6 KRT1 RBM15 KRT9 KRT17 PLEKHA4 VIRMA HNRNPU

2.38e-041941698int:WTAP
Cytoband12q13.13

KRT72 KRT1 KRT3 KRT74 KRT79 KRT76

2.09e-0767172612q13.13
Cytoband17q21.2

KRT26 KRT17 KRT27 PLEKHH3 KRT24

6.92e-0670172517q21.2
CytobandEnsembl 112 genes in cytogenetic band chr12q13

KRT72 KRT1 KRT3 KRT74 ITGA5 KRT79 MAP3K12 ZC3H10 KRT76

3.44e-054231729chr12q13
CytobandEnsembl 112 genes in cytogenetic band chr17q21

KRT26 KRT9 KRT17 KRT27 HOXB-AS3 NAGS PLEKHH3 KRT24 FAM171A2

8.10e-054731729chr17q21
CytobandEnsembl 112 genes in cytogenetic band chr19p13

SAMD1 SIN3B NR2F6 PDE4A REXO1 CIRBP SAFB SHC2 SAFB2 ONECUT3

9.07e-0479717210chr19p13
GeneFamilyKeratins, type II

KRT72 KRT1 KRT3 KRT74 KRT79 KRT76

2.09e-08271216609
GeneFamilyKeratins, type I

KRT26 KRT9 KRT17 KRT27 KRT24

1.07e-06281215608
GeneFamilyRNA binding motif containing

RBM15 RBMXL3 EIF4H RBM3 HNRNPA1L2 HNRNPA2B1 CIRBP SAFB SAFB2 ALYREF

1.69e-0621312110725
GeneFamilyIntermediate filaments Type IV

SYNM INA

6.55e-0461212611
GeneFamilyNKL subclass homeoboxes and pseudogenes

NKX2-6 NKX1-1 VAX2 EN1

1.06e-03671214519
GeneFamilyNon-clustered protocadherins

PCDH17 PCDH7

2.81e-0312121221
GeneFamilyCollagens

COL3A1 COL17A1 COL23A1

3.60e-03461213490
CoexpressionMANNO_MIDBRAIN_NEUROTYPES_HDA2

KRT17 EPB41L4B SRCIN1 FOXA1 GRM5 CCDC85A PCDH17 CACNG8 INA NRXN2 ERC2 EN1 NYAP1 JPH3 PDZRN4

1.61e-0651317215M39069
CoexpressionMIKKELSEN_NPC_HCP_WITH_H3K27ME3

KCTD8 CLSTN2 SRCIN1 ANKRD63 C6orf132 ADRA2C SKOR1 ONECUT3 DMRT1 SHISA6 JPH3

1.88e-0534517211M2009
CoexpressionMIKKELSEN_NPC_HCP_WITH_H3K27ME3

KCTD8 CLSTN2 SRCIN1 ANKRD63 C6orf132 ADRA2C SKOR1 ONECUT3 DMRT1 SHISA6 JPH3

1.98e-0534717211MM860
CoexpressionTABULA_MURIS_SENIS_MAMMARY_GLAND_LUMINAL_EPITHELIAL_CELL_OF_MAMMARY_GLAND_AGEING

KRT17 RBM3 FOXA1 HNRNPA2B1 DDX3X RING1 CIRBP PCF11 PAM LTBP3 MTCH1

2.26e-0535217211MM3788
ToppCell10x_3'_v2v3-Neoplastic-Stem-like-NPC-like-NPC-like_neural-B|10x_3'_v2v3 / Platform, Oncotype, Lineage, Cell_class, celltype (level4), mutation group

SCRT2 KIF26A CLSTN2 MEX3A FAM171A2 NRXN2 SRRM3 NYAP1 MEX3B PDZRN4

3.58e-09189172108e6b6025f5554672e26a5d19fe365acb4333789c
ToppCelldroplet-Skin|droplet / Skin_Bladder_Kidney_Mammary_Gland - method, tissue, subtissue, age, lineage, cell ontology and free annotation

KRT1 EPPK1 COL17A1 KRT17 CAPNS2 KRT79 PLEKHH3 COL23A1

6.37e-071851728657fd191ed160f8620d57b33820ec7222806f289
ToppCellBronchial-NucSeq-Epithelial-Epi_submucosal-gland-Myoepithelial|NucSeq / Cell types per location group and 10X technology with lineage, and cell group designations

COL17A1 KRT17 SYNM KCTD8 COL23A1 USP31 KCNQ5 PCDH7

9.84e-071961728a58bdf9de05d13d84211e09a933679d485bf8ab4
ToppCellBronchial-NucSeq-Stromal-Myofibroblastic-Muscle_smooth_airway_ASM|NucSeq / Cell types per location group and 10X technology with lineage, and cell group designations

SYNM HOXB-AS3 KCTD8 COL23A1 DES KCNQ5 PCDH7 PDZRN4

9.84e-0719617289830fb3da7a60f65ad463e9054bb77c06b025e4d
ToppCellTracheal-10x5prime-Stromal-Peri/Epineurial_-NAF_epineurial|10x5prime / Cell types per location group and 10X technology with lineage, and cell group designations

SEC16B PLEKHA4 COL23A1 GDF7 LTBP3 DMP1 NYAP1 PDZRN4

1.10e-061991728fbec5c034576cb1adaf05f6f97cc5525d19e0c1b
ToppCellBasal_cells-SSc-ILD_01|World / lung cells shred on cell class, cell subclass, sample id

EPPK1 COL17A1 KRT17 MEX3A IGFBP2 INA PCDH7

3.55e-06164172785487a303194f5244956ec1ca2d1758d38117f41
ToppCellfacs-Trachea-3m-Mesenchymal-myofibroblast-tracheobronchial_smooth_muscle_cell-smooth_muscle_cell_of_trachea_l6-17|3m / method, tissue, age, lineage, sublineage, cell ontologies, cell type and subtype

KRT1 KCTD8 AMER2 INA ERC2 UNC5D JPH3

4.50e-061701727941d637cf76918ee4b0a1833abd1a42593cb8b1a
ToppCelldroplet-Limb_Muscle-MUSCLE-1m-Lymphocytic-unknown|Limb_Muscle / Tongue_Heart_Limb_Muscle_Aorta_Diaphragm - method, tissue, subtissue, age, lineage, cell ontology and free annotation

ZCWPW1 EPB41L4B PLEKHA4 SRCIN1 MEX3A KCNQ5 CTU1

5.24e-0617417276987fe7959afce347282f632abc16d800ccab7c4
ToppCelldroplet-Limb_Muscle-nan-21m-Endothelial-unknown|Limb_Muscle / Tongue_Heart_Limb_Muscle_Aorta_Diaphragm - method, tissue, subtissue, age, lineage, cell ontology and free annotation

EPB41L4B RASGEF1A SRCIN1 REXO1 USP20 C6orf132 INKA1

5.86e-061771727291231b1520c135e92739e201495fe1935efa927
ToppCellControl-Fibroblasts-Airway_smooth_muscle|Control / group, cell type (main and fine annotations)

COL3A1 SYNM ITGA5 DES SPANXA2-OT1 PCDH7 PDZRN4

6.54e-061801727d0de12749ef0f51f0931c6e7b9b99966bdbc3ec1
ToppCell3'-GW_trimst-1.5-SmallIntestine-Neuronal-neurons_A-Branch_A4_(IN)|GW_trimst-1.5 / Celltypes from developing, pediatric, Crohn's, & adult GI tract

RASGEF1A SRCIN1 MAP7 INA KCNQ5 NRXN2 SPRN

7.03e-061821727be32b5b8153c1053cbb55f1fccfa27c3ee97c1e1
ToppCelldroplet-Pancreas-Endocrine-18m-Endothelial-nan|Pancreas / Large_Intestine_Pancreas_Liver - method, tissue, subtissue, age, lineage, cell ontology and free annotation

SYNM ITGA5 PCDH17 TRIL MEX3A ADO INKA1

7.82e-061851727512a195ebbae445afe3722a3943020080daf2f3c
ToppCellfacs-Trachea-nan-3m-Epithelial-basal_epithelial_cell_of_tracheobronchial_tree|Trachea / Lung_Trachea - method, tissue, subtissue, age, lineage, cell ontology and free annotation

EPPK1 COL17A1 KRT17 MAP7 FOXA1 ALS2CL C6orf132

8.39e-061871727fe9fc21192ede2eea61f419d20ccda254569d0a6
ToppCell3'-GW_trimst-1-LargeIntestine-Neuronal-neurons_A-Branch_A3_(IPAN/IN)|GW_trimst-1 / Celltypes from developing, pediatric, Crohn's, & adult GI tract

HCN4 AMER2 INA NRXN2 SRRM3 SPRN JPH3

8.69e-061881727bd091503f580dedab40e0996273101285d24b586
ToppCellEntopeduncular-Neuronal-Inhibitory-iN1(Gad1Gad2_Th)-Pvalb|Entopeduncular / BrainAtlas - Mouse McCarroll V32

SCRT2 HCN4 SKOR1 SP9 ONECUT3

8.76e-067217257877184d5c9dd6d96476d71e7504e58c0b4d0f26
ToppCelldroplet-Skin-nan-18m|Skin / Skin_Bladder_Kidney_Mammary_Gland - method, tissue, subtissue, age, lineage, cell ontology and free annotation

CLSTN2 SOX8 KRT76 SHC2 EN1 UNC5D

9.21e-0612517265a309ce803d2b8efd791eb21808121bf5fc3ea8e
ToppCellfacs-Brain_Non-Myeloid-Cortex-24m-Neuronal|Brain_Non-Myeloid / Brain_Non-Myeloid_Brain_Myeloid - method, tissue, subtissue, age, lineage, cell ontology and free annotation

RASGEF1A SRCIN1 GRM5 NRXN2 ERC2 SRRM3 NYAP1

1.03e-051931727be28070c049e7cb68bcd54f582226eb2f5e4bc1c
ToppCell21-Trachea-Epithelial-Epithelial|Trachea / Age, Tissue, Lineage and Cell class

COL3A1 SALL3 KCTD8 SOX8 DES NRXN2 SP9

1.03e-0519317279a8bb44a37f3202e3123a6680bd5545dc91a6d40
ToppCell3'-GW_trimst-1.5-SmallIntestine-Neuronal-neurons_A|GW_trimst-1.5 / Celltypes from developing, pediatric, Crohn's, & adult GI tract

KIF26A SRCIN1 MAP7 XKR7 AMER2 INA SRRM3

1.03e-051931727a189d46c39067b717509cd144e0225cc93d7731d
ToppCellPosterior_cortex-Neuronal|Posterior_cortex / BrainAtlas - Mouse McCarroll V32

RASGEF1A GRM5 INA TTLL11 SYN1 NYAP1 JPH3

1.03e-051931727b4989e3436e84dbec3789b46057e0f7a0ebf09d4
ToppCellfacs-Brain_Non-Myeloid-Cortex-24m-Neuronal-nan|Brain_Non-Myeloid / Brain_Non-Myeloid_Brain_Myeloid - method, tissue, subtissue, age, lineage, cell ontology and free annotation

RASGEF1A SRCIN1 GRM5 NRXN2 ERC2 SRRM3 NYAP1

1.03e-0519317270c652ebe22ce5d2927599dd97ef1920547858395
ToppCellfacs-Brain_Non-Myeloid-Cortex-24m-Neuronal-neuron|Brain_Non-Myeloid / Brain_Non-Myeloid_Brain_Myeloid - method, tissue, subtissue, age, lineage, cell ontology and free annotation

RASGEF1A SRCIN1 GRM5 NRXN2 ERC2 SRRM3 NYAP1

1.03e-0519317278689a70a33a7c3823dc647d41ac0160e7c3ae396
ToppCell10x_3'_v2v3-Neoplastic-Stem-like-NPC-like-NPC-like_neural-G|10x_3'_v2v3 / Platform, Oncotype, Lineage, Cell_class, celltype (level4), mutation group

SCRT2 KIF26A MEX3A INA SP9 SRRM3 MEX3B

1.07e-0519417274e93bd903cddfd0c8f220b6a35b449895de4119b
ToppCellHippocampus-Neuronal|Hippocampus / BrainAtlas - Mouse McCarroll V32

PDE4A GRM5 INA TTLL11 SYN1 NYAP1 JPH3

1.07e-0519417278aeb347b3024354c9505f4f0fddf0b843489dc6b
ToppCellfacs-Brain_Non-Myeloid-Cortex-3m-Neuronal|Brain_Non-Myeloid / Brain_Non-Myeloid_Brain_Myeloid - method, tissue, subtissue, age, lineage, cell ontology and free annotation

RASGEF1A CLSTN2 GRM5 INA KCNQ5 SYN1 ERC2

1.10e-051951727ffbab350e67d9c4b66c0ab84550daec8b8139a27
ToppCellBrain_organoid-organoid_Paulsen_bioRxiv-6_mon-Neuronal-INs|6_mon / Sample Type, Dataset, Time_group, and Cell type.

KIF26A MEX3A INA SP9 SRRM3 MEX3B PDZRN4

1.14e-051961727556e18eae05bf19259fe02848bcc9120aa2a9d29
ToppCellBrain_organoid-organoid_Kanton_Nature-Organoid-1M-Neuronal-ventral_progenitors_and_neurons_2|Organoid-1M / Sample Type, Dataset, Time_group, and Cell type.

SCRT2 CACNG8 INA NRXN2 SYN1 SP9 SRRM3

1.22e-051981727b73b9feb82997b654718aa27f33ca7b454214802
ToppCellBrain_organoid-organoid_Paulsen_bioRxiv-6_mon-Neuronal|6_mon / Sample Type, Dataset, Time_group, and Cell type.

SCRT2 MEX3A INA AUTS2 SP9 SRRM3 MEX3B

1.22e-051981727076c862f2a723f0361749377561cae902068b1a0
ToppCellcellseq-Mesenchymal-Fibroblastic-Fibroblastic_2-ASMC|cellseq / Celltype signatures by Technology, Lineage, Lineage_subclass, Celltype_group, Cell_type2

COL3A1 SYNM HOXB-AS3 ADAMTS8 COL23A1 DES PCDH7

1.22e-051981727e9f434bfd072e590fe44d518057ee5aa653038f3
ToppCellTracheal-10x3prime_v2-Stromal-Myofibroblastic-Muscle_perivascular_immune_recruiting|10x3prime_v2 / Cell types per location group and 10X technology with lineage, and cell group designations

PLEKHG2 PDCD7 SOWAHC GPR161 DES ADRA2C MYOZ1

1.30e-052001727410b1a31de21c57d87ca2104f61cf4a7d4dd2f30
ToppCellBrain_organoid-organoid_Tanaka_cellReport-5w-Mesenchymal-Mesoderm|5w / Sample Type, Dataset, Time_group, and Cell type.

ZCWPW1 RASGEF1A VIRMA SHC2 MYOZ1 FAM171A2 ALYREF

1.30e-0520017270927061536a664b4f7feb9e5b0a8c11ca0d5955c
ToppCellFetal_29-31_weeks-Epithelial-lung_neuroendocrine_cell_(PNEC)-D062|Fetal_29-31_weeks / Lineage, Cell type, age group and donor

KCTD8 CLSTN2 SOX8 INA SRRM3 NYAP1

1.90e-051421726819e983688d126d89a71abc03d72525cc759a347
ToppCellFetal_29-31_weeks-Epithelial-lung_neuroendocrine_cell_(PNEC)-D088|Fetal_29-31_weeks / Lineage, Cell type, age group and donor

HCN4 KCTD8 ERC2 SRRM3 UNC5D INO80B

3.60e-0515917267747cef94c55144fddcd024a7495318357f1351b
ToppCellSmart-start-Cell-Wel_seq-Neoplastic-Stem-like-NPC-like-NPC-like_neural-A|Smart-start-Cell-Wel_seq / Platform, Oncotype, Lineage, Cell_class, celltype (level4), mutation group

SCRT2 CLSTN2 XKR7 MEX3A SPANXA2-OT1 AUTS2

3.86e-051611726bd520c9a1927d5d5355b4421e6b90b58bfb76a42
ToppCellSubstantia_nigra-Endothelial-MURAL-M1(Rgs5Acta2)-M1_1-MURAL_Mural.Rgs5Acta2.Cbr2_(Mural.Rgs5Acta2.Cbr2)|Substantia_nigra / BrainAtlas - Mouse McCarroll V32

HJV PLEKHA4 ADAMTS8 KRT79 DES

4.12e-059917250e2f6ba2261cc289f8f4aec5aac3051f6321e041
ToppCellSubstantia_nigra-Endothelial-MURAL-M1(Rgs5Acta2)-M1_1-MURAL_Mural.Rgs5Acta2.Cbr2_(Mural.Rgs5Acta2.Cbr2)-|Substantia_nigra / BrainAtlas - Mouse McCarroll V32

HJV PLEKHA4 ADAMTS8 KRT79 DES

4.12e-05991725ce9d6d9b82bdc1ebb58b0b6e04abfb022dd1de88
ToppCellrenal_cortex_nuclei-Hypertensive_with+without-CKD-Mesenchymal--glomerular_mesenchymal_cell-Renin-positive_Juxtaglomerular_Granular_Cell|Hypertensive_with+without-CKD / Celltypes from Cells and Nuclei per compartment and clinical group

SYNM ADAMTS8 PCDH17 COL23A1 KCNQ5 PDZRN4

4.28e-05164172643630a448f4369fa9e4e3eccdf3b9f29cec16c39
ToppCellrenal_cortex_nuclei-Hypertensive_with+without-CKD-Mesenchymal-|Hypertensive_with+without-CKD / Celltypes from Cells and Nuclei per compartment and clinical group

SYNM ADAMTS8 PCDH17 COL23A1 KCNQ5 PDZRN4

4.28e-051641726108fbecb56d69a675d6ce6e826a873ae528f2fd7
ToppCellrenal_cortex_nuclei-Hypertensive_with+without-CKD-Mesenchymal--glomerular_mesenchymal_cell|Hypertensive_with+without-CKD / Celltypes from Cells and Nuclei per compartment and clinical group

SYNM ADAMTS8 PCDH17 COL23A1 KCNQ5 PDZRN4

4.28e-05164172646208f18325976c89f572f6627aea0582142b92d
ToppCell368C-Myeloid-Macrophage-FABP4+_Macrophage_2|Macrophage / Donor, Lineage, Cell class and subclass (all cells)

KRT17 SYNM ADAMTS8 TEF C6orf132 DES

4.43e-0516517263d2acdae0dd2b79a15f74158e8e566ce22b4218e
ToppCellBasal_cells-Donor_07|World / lung cells shred on cell class, cell subclass, sample id

EPPK1 KRT17 C6orf132 MEX3A IGFBP2 PCDH7

4.58e-051661726aea2ae12e4746149ebc6da063ef694381c098f80
ToppCellBasal_cells-SSc-ILD_02|World / lung cells shred on cell class, cell subclass, sample id

KRT17 LTB4R2 SOWAHC SLC22A18AS IGFBP2 INKA1

5.23e-051701726776d4224a682b6c648041827efd69794f88906f0
ToppCell11.5-Airway-Epithelial-Basal_cell|Airway / Age, Tissue, Lineage and Cell class

KRT17 EPB41L4B CAPNS2 FOXA1 CACNG8 IGFBP2

5.58e-0517217269d4d92e2d16dfc8a394f2641653bb97de20a2530
ToppCell390C-Epithelial_cells-Epithelial-H_(AT1)-|Epithelial_cells / Donor, Lineage, Cell class and subclass (all cells)

COL17A1 KRT17 IGFBP2 KCNQ5 PCDH7 INKA1

5.58e-051721726bb542f6ca4eb8167129bc84ca1160a54fbb68731
ToppCell390C-Epithelial_cells-Epithelial-H_(AT1)|Epithelial_cells / Donor, Lineage, Cell class and subclass (all cells)

COL17A1 KRT17 IGFBP2 KCNQ5 PCDH7 INKA1

5.58e-051721726aff37b9689b0d30ee7097d997d9588efc475c8fd
ToppCellStriatum|World / BrainAtlas - Mouse McCarroll V32

KRT9 ATP5IF1 EMC4 ANKRD63 HNRNPA2B1 SP9

5.58e-0517217268da598d209b8a6646b9f4de1aed833f6fcbb9909
ToppCell3'-Child04-06-SmallIntestine-Epithelial-neuro-epithelial|Child04-06 / Celltypes from developing, pediatric, Crohn's, & adult GI tract

HCN4 SRCIN1 FOXA1 XKR7 INA ONECUT3

5.76e-05173172607798461d12d04f3dabff03481c999cb07c5af2f
ToppCellnucseq-Mesenchymal-Fibroblastic-Fibroblastic_2-ASMC|nucseq / Celltype signatures by Technology, Lineage, Lineage_subclass, Celltype_group, Cell_type2

SYNM ITGA5 DES SPANXA2-OT1 PCDH7 PDZRN4

5.76e-051731726cb6389536195443633adb06e5f1b7483530773d1
ToppCelldroplet-Thymus-nan-18m-Lymphocytic-Double_negative_thymocyte,_DN3_(Cd8-,_Cd4-),_some_express_pre_TCR_alpha|Thymus / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation

EPB41L4B GSR MEX3A TTLL11 LZTS2 PCDH7

5.95e-0517417269eab43885496b8586f8ec5b4bcb1fd5b209218e5
ToppCellPericytes-IPF_01|World / lung cells shred on cell class, cell subclass, sample id

COL3A1 SYNM HOXB-AS3 ADAMTS8 DES ADRA2C

6.14e-051751726ddf721023a7afc8085c5de17aa254a6575444c0f
ToppCellfacs-Trachea-nan-18m-Epithelial-basal_epithelial_cell_of_tracheobronchial_tree|Trachea / Lung_Trachea - method, tissue, subtissue, age, lineage, cell ontology and free annotation

KRT1 KRT17 KRT27 CAPNS2 FOXA1 IGFBP2

6.14e-051751726eb87275da6f61ecb4fbc89421dfd27bead1e0f48
ToppCell3'-GW_trimst-2-SmallIntestine-Neuronal-neurons_B-Branch_B3_(IPAN)|GW_trimst-2 / Celltypes from developing, pediatric, Crohn's, & adult GI tract

SRCIN1 PCDH17 INA KCNQ5 NYAP1 SPRN

6.33e-05176172604dad262929581872e5bbc66cd8182c963e7e52f
ToppCellHippocampus|World / BrainAtlas - Mouse McCarroll V32

EIF4H CLSTN2 KRT79 GPR161 CACNG8 SHISA6

6.33e-051761726f120a703f6d2f2d5f55eae1aea2e6382a485828f
ToppCell3'-Airway_Nasal-Epithelial-Airway_epithelium-respiratory_basal_cell-Suprabasal-Suprabasal_L.0.0.3.1|3' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5

COL17A1 KRT17 RBM3 IGFBP2 UNC5D INKA1

6.54e-0517717269e65b39fd797b6ce204b6480415810d1923acee5
ToppCellChildren_(3_yrs)-Mesenchymal-airway_smooth_muscle_cell|Children_(3_yrs) / Lineage, Cell type, age group and donor

COL3A1 ADAMTS8 DES KCNQ5 LTBP3 PCDH7

6.54e-051771726b59967219f7d874805768e247c0eb2bc4d4420c8
ToppCell3'-Airway_Nasal-Epithelial-Airway_epithelium-respiratory_basal_cell-Suprabasal-Suprabasal_L.0.0.3.0|3' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5

KRT17 RBM3 LTB4R2 IGFBP2 DMRT1 INKA1

6.54e-051771726aadf1d10eccfb014cf3d621b1f01dd6d76df63ac
ToppCell390C-Endothelial_cells-Endothelial-E-|390C / Donor, Lineage, Cell class and subclass (all cells)

KIF26A ALS2CL CCDC85A PCDH17 IGFBP2 SHC2

6.74e-051781726804ac3725c1f88e2212172bfb9aa01d97a735621
ToppCell3'-GW_trimst-2-SmallIntestine-Neuronal-neuron_precursor-Neuroblast|GW_trimst-2 / Celltypes from developing, pediatric, Crohn's, & adult GI tract

PCDH17 HOXA5 XKR7 MEX3A SRRM3 NYAP1

6.74e-05178172613dfd28a80889c2dacdc65b94a41bb9762dc409d
ToppCellfacs-Brain_Non-Myeloid-Striatum-24m-Neuronal-neuron|Brain_Non-Myeloid / Brain_Non-Myeloid_Brain_Myeloid - method, tissue, subtissue, age, lineage, cell ontology and free annotation

KRT9 RASGEF1A ANKRD63 SRRM3 NYAP1 JPH3

6.74e-051781726a74e5a390cbeaca9de1fdb7b2a0e50783bd202dd
ToppCellfacs-Brain_Non-Myeloid-Striatum-24m-Neuronal-nan|Brain_Non-Myeloid / Brain_Non-Myeloid_Brain_Myeloid - method, tissue, subtissue, age, lineage, cell ontology and free annotation

KRT9 RASGEF1A ANKRD63 SRRM3 NYAP1 JPH3

6.74e-0517817261bddbc083c36657bd6910f7466126ab325e88176
ToppCell3'-GW_trimst-2-SmallIntestine-Neuronal-neuron_precursor|GW_trimst-2 / Celltypes from developing, pediatric, Crohn's, & adult GI tract

PCDH17 HOXA5 XKR7 MEX3A SRRM3 NYAP1

6.74e-051781726a9ba4089413b1c55d667ce836b6972ca572ee2b8
ToppCell390C-Endothelial_cells-Endothelial-E|390C / Donor, Lineage, Cell class and subclass (all cells)

KIF26A ALS2CL CCDC85A PCDH17 IGFBP2 SHC2

6.74e-051781726ad6dc4a375664c919bd48c35c48a561fc5a7de8c
ToppCellfacs|World / Skin_Bladder_Kidney_Mammary_Gland - method, tissue, subtissue, age, lineage, cell ontology and free annotation

RBM15 EPPK1 COL17A1 KRT17 CAPNS2 ADPRS

6.95e-0517917268001db3044e8657980e24422377c4fdb0d7b323e
ToppCellfacs-Pancreas-Endocrine-24m-Epithelial-pancreatic_D_cell|Pancreas / Large_Intestine_Pancreas_Liver - method, tissue, subtissue, age, lineage, cell ontology and free annotation

KCTD8 RASGEF1A NAGS CIRBP NRXN2 SHISA6

7.17e-0518017260677bf4a5177d9cbc6716195bd966eeae8de2f31
ToppCell5'-Adult-LymphNode-Mesenchymal-myocytic|Adult / Celltypes from developing, pediatric, Crohn's, & adult GI tract

CLSTN2 DES ADRA2C ADO SRRM3 PCDH7

7.86e-051831726d67454baf0cf791a743b51afd1cb25bfb5765385
ToppCellfacs-Brain_Non-Myeloid-Striatum_-18m-Neuronal-medium_spiny_neuron|Brain_Non-Myeloid / Brain_Non-Myeloid_Brain_Myeloid - method, tissue, subtissue, age, lineage, cell ontology and free annotation

RASGEF1A ANKRD63 GRM5 ADRA2C KCNQ5 ERC2

7.86e-051831726bf7f1cb55ed55981b8b355d5774055c96e658ff2
ToppCellPericytes-Myositis-ILD_01|World / lung cells shred on cell class, cell subclass, sample id

COL3A1 SYNM HOXB-AS3 DES ADRA2C FAM171A2

7.86e-0518317264617b18da8d699a44e4c47980197b1e7eb951470
ToppCellfacs-Brain_Non-Myeloid-Striatum_-18m-Neuronal-SPN_Neuron_STR|Brain_Non-Myeloid / Brain_Non-Myeloid_Brain_Myeloid - method, tissue, subtissue, age, lineage, cell ontology and free annotation

RASGEF1A ANKRD63 GRM5 ADRA2C KCNQ5 ERC2

7.86e-0518317269533db4db2c6ae78d7ca1682cf4efed12183396f
ToppCell5'-Adult-LymphNode-Mesenchymal-myocytic-myofibroblast_(RSPO2+)|Adult / Celltypes from developing, pediatric, Crohn's, & adult GI tract

CLSTN2 DES ADRA2C ADO SRRM3 PCDH7

7.86e-051831726e49ac8314b6fe98426b1514ea68d646297b8bc0f
ToppCellwk_15-18-Epithelial-Proximal_epithelial-basal_proximal|wk_15-18 / Celltypes from embryonic and fetal-stage human lung

COL17A1 KRT17 CAPNS2 LTB4R2 FOXA1 IGFBP2

8.10e-051841726575de705053da8b289670b5c40c1627c0833b5ed
ToppCellwk_08-11-Epithelial-PNS-PCP4+_neuron|wk_08-11 / Celltypes from embryonic and fetal-stage human lung

HCN4 CLSTN2 SRCIN1 INA KCNQ5 SRRM3

8.10e-051841726eac2a9089913f33a961ba11519b53645790f2056
ToppCellwk_20-22-Epithelial-PNS-intermediate_Schwann|wk_20-22 / Celltypes from embryonic and fetal-stage human lung

NR2F6 EPB41L4B PLEKHA4 CLSTN2 SOX8 ERC2

8.10e-0518417264e3ba64692868563a579902aa9c6f88cab5bce26
ToppCellTCGA-Kidney-Primary_Tumor-Renal_Cell_Carcinoma-Kidney_Clear_Cell_Renal_Carcinoma-2|TCGA-Kidney / Sample_Type by Project: Shred V9

COL3A1 PLEKHG2 ITGA5 PCDH17 GPR161 MEX3B

8.59e-0518617261e6526fc9e9381b7ace864588cc7bd80194338d6
ToppCellSubstantia_nigra-Neuronal|Substantia_nigra / BrainAtlas - Mouse McCarroll V32

RASGEF1A CLSTN2 INA TTLL11 SYN1 NYAP1

8.59e-0518617263f889083fcffe516388e9b03a5e23af2010ced33
ToppCellFetal_29-31_weeks-Epithelial-lung_neuroendocrine_cell_(PNEC)|Fetal_29-31_weeks / Lineage, Cell type, age group and donor

HCN4 KCTD8 INA ERC2 SRRM3 UNC5D

8.59e-051861726b45cce768e4bf91da194fd9660cab7520dfb15ac
ToppCellIPF-Epithelial-Aberrant_Basaloid|IPF / Disease state, Lineage and Cell class

CDKN2B COL17A1 KRT17 ALS2CL MEX3A KCNQ5

8.85e-05187172619d6a404fc3651d98a93e3848e372df51a239c57
ToppCellTCGA-Skin-Primary_Tumor-Melanoma-Skin_Cutaneous_Melanoma-6|TCGA-Skin / Sample_Type by Project: Shred V9

KRT1 EPPK1 COL17A1 KRT17 CAPNS2 C6orf132

8.85e-0518717262ca7928baf0c5e61f7294ed05e6e6f0e0adf9d3f
ToppCellAdult-Epithelial-alveolar_epithelial_cell_type_2-D175|Adult / Lineage, Cell type, age group and donor

EPPK1 MAP7 ACSS2 AUTS2 ERC2 MAP3K13

9.11e-051881726ec38def1fdbb34ed9b30244806975bd5a4370164
ToppCellTCGA-Skin-Primary_Tumor-Melanoma-Skin_Cutaneous_Melanoma|TCGA-Skin / Sample_Type by Project: Shred V9

KRT1 EPPK1 COL17A1 KRT17 CAPNS2 C6orf132

9.66e-0519017263188c7bd225cbcf46a21e2fb784336cdd9665995
ToppCelldroplet-Kidney-nan-21m-Epithelial-Stroma____kidney_mesangial_cell|Kidney / Skin_Bladder_Kidney_Mammary_Gland - method, tissue, subtissue, age, lineage, cell ontology and free annotation

HJV SYNM CLSTN2 PLEKHH3 TRIL DES

9.66e-051901726e04f47705851563515b6a66a2634cf7a574f7bda
ToppCellTCGA-Skin-Primary_Tumor|TCGA-Skin / Sample_Type by Project: Shred V9

KRT1 EPPK1 COL17A1 KRT17 CAPNS2 C6orf132

9.66e-051901726e2b26a03c6ab24d9b0f4150c47597be37767d86e
ToppCelldroplet-Kidney-nan-21m-Epithelial-kidney_mesangial_cell|Kidney / Skin_Bladder_Kidney_Mammary_Gland - method, tissue, subtissue, age, lineage, cell ontology and free annotation

SYNM CLSTN2 ANKRD63 PLEKHH3 TRIL DES

9.66e-0519017261803b1e7c36285f9eaabc3c6e9a9752c5908db3d
ToppCellTCGA-Skin-Primary_Tumor-Melanoma|TCGA-Skin / Sample_Type by Project: Shred V9

KRT1 EPPK1 COL17A1 KRT17 CAPNS2 C6orf132

9.66e-05190172601fb45add4661bc86cd0a34fac35177907152dbb
ToppCellP07|World / developmental_time, Lineage, Cell group, Cell type, Cell type_cellcyc-phase

COL3A1 RBM3 CIRBP DES PAM MTCH1

9.66e-05190172638a613a9bca0ba040c3ada00286d1ce6f83ab23a
ToppCell10x_3'_v2v3-Neoplastic-Stem-like-NPC-like-NPC-like_neural-D|10x_3'_v2v3 / Platform, Oncotype, Lineage, Cell_class, celltype (level4), mutation group

HOXA5 MEX3A INA SP9 SRRM3 PDZRN4

9.66e-051901726b4dfc41f5a630140cab8b1b86de85de0f5b25e4a
ToppCellfacs-GAT|facs / Fat_BAT_GAT_MAT_SCAT - method, tissue, subtissue, age, lineage, cell ontology and free annotation

RBM3 CIRBP HOXA5 TRIL DES MTCH1

9.94e-0519117261f5d1e8c313a8dc83c06d2ee45f369b0ec507fbf
ToppCellBrain_organoid-organoid_Velasco_nature-6_mon-IPC_like-IPCs|6_mon / Sample Type, Dataset, Time_group, and Cell type.

SCRT2 KIF26A RPS2 MEX3A MEX3B UNC5D

1.02e-041921726bd91bf0ceeac49dc5a18aa2e401244db0ca596ae
ToppCellPCW_10-12-Epithelial-Epithelial_alveolar-distal-epi_CTGF^high_distal_(3)|PCW_10-12 / Celltypes from embryonic and fetal-stage human lung

EPPK1 KRT17 MAP7 FOXA1 C6orf132 IGFBP2

1.02e-04192172639804d9ddc67c1b41887752df2503389eae44a1a
ToppCell3'-GW_trimst-1.5-SmallIntestine-Neuronal-neurons_A-Branch_A1_(iMN)|GW_trimst-1.5 / Celltypes from developing, pediatric, Crohn's, & adult GI tract

KIF26A SRCIN1 XKR7 AMER2 INA SRRM3

1.02e-041921726fe9297cb65234d9f511bab1a5dbf2679d5a4cd15
ToppCelldroplet-Lung-1m-Mesenchymal-myofibroblast|1m / method, tissue, age, lineage, sublineage, cell ontologies, cell type and subtype

COL3A1 CLSTN2 DES PAM LTBP3 SPRN

1.02e-041921726dc4b4e16e6eb212e45fb70695afd1c7e91027407
ToppCellEntopeduncular-Neuronal|Entopeduncular / BrainAtlas - Mouse McCarroll V32

RASGEF1A INA SYN1 ERC2 SRRM3 JPH3

1.02e-0419217264c35e5c28a40b439044797ba1f06cb7c36b2a8de
ToppCellBrain_organoid-organoid_Velasco_nature-6_mon-IPC_like|6_mon / Sample Type, Dataset, Time_group, and Cell type.

SCRT2 KIF26A RPS2 MEX3A MEX3B UNC5D

1.02e-04192172618fbf485ad762ba7a9ac3e19bad136b0cf3af3c5
ToppCell5'-GW_trimst-2-LargeIntestine-Mesenchymal-myocytic|GW_trimst-2 / Celltypes from developing, pediatric, Crohn's, & adult GI tract

KRT17 SYNM ADAMTS8 DES PCDH7 PDZRN4

1.02e-041921726d0fb6885f023d55a2b7984c99db9c6463258f788
ToppCelldroplet-Kidney-nan-3m-Epithelial-Epcam____kidney_collecting_duct_principal_cell|Kidney / Skin_Bladder_Kidney_Mammary_Gland - method, tissue, subtissue, age, lineage, cell ontology and free annotation

EPB41L4B SRCIN1 ERMP1 C6orf132 FAM171A2 LTBP3

1.05e-041931726536b277d90070c4571c592a3c6323b4bf4819f67
ToppCell15|World / Age, Tissue, Lineage and Cell class

EPPK1 EPB41L4B HNRNPA1L2 FOXA1 IGFBP2 LTBP3

1.05e-041931726a8ad0de955494d6f5929dc44ba46627d06d95453
ToppCellThalamus-Neuronal|Thalamus / BrainAtlas - Mouse McCarroll V32

CLSTN2 INA SYN1 ERC2 SRRM3 NYAP1

1.05e-041931726712a4acd1167e43543950bc819ff11984e6f718d
ToppCell10x3'2.3-week_17-19-Mesenchymal_myocytic-stroma-myofibroblast|week_17-19 / cell types per 3 fetal stages;per 3',per 5'

COL3A1 PLEKHA4 DES ADRA2C IGFBP2 PCDH7

1.05e-04193172602dfd1df1e7fc84bfca2b0c95138b5b4408bb5d1
ToppCell10x3'2.3-week_17-19-Myeloid_neutrophil-granulo-eo/baso/mast-basophil|week_17-19 / cell types per 3 fetal stages;per 3',per 5'

PDE4A GALC ERMP1 GSR CACNG8 ALAS1

1.08e-0419417265da8873cddff582e5693b32fd3aaebc102f65fc0
ToppCellBrain_organoid-organoid_Paulsen_bioRxiv-6_mon-IPC_like-IPCs|6_mon / Sample Type, Dataset, Time_group, and Cell type.

SCRT2 RPS2 SOX8 PGRMC2 MEX3B UNC5D

1.08e-0419417262378a98452f6ec33870eeb994b8b812e9b507f4c
ToppCellBrain_organoid-organoid_Paulsen_bioRxiv-6_mon-IPC_like|6_mon / Sample Type, Dataset, Time_group, and Cell type.

SCRT2 RPS2 SOX8 PGRMC2 MEX3B UNC5D

1.08e-0419417267ba0445a486feac18b3a4fd6f2855c102e374e2d
Drugal-Badry

KRT72 KRT1 KRT3 KRT9 KRT17 KRT74 PDCD7 MAP3K12 KRT76 KRT24

5.03e-0716517110CID000004545
Drughomocysteine thiolactone

KRT72 KRT1 KRT3 KRT9 KRT17 KRT74 KRT76 KRT24 ADO

6.64e-071311719CID000107712
DrugAC1L9MJT

KRT72 KRT1 KRT3 KRT9 COL17A1 KRT17 KRT74 DES KRT24 JPH3

2.00e-0619217110CID000448959
Drugteleocidin B

KRT72 KRT1 KRT3 KRT9 KRT17 KRT74 KRT76 KRT24

4.25e-061231718CID000072425
Drugsulfur mustard

KRT72 KRT1 KRT3 KRT9 KRT17 KRT74 KRT76 KRT24

6.41e-061301718CID000010461
DiseaseKeratosis of Greither

KRT1 KRT9

2.96e-0521612C2936837
DiseasePalmoplantar keratoderma, epidermolytic

KRT1 KRT9

2.96e-0521612cv:C1721006
DiseaseEpidermolytic palmoplantar keratoderma Vorner type

KRT1 KRT9

8.84e-0531612C2931735
DiseaseEpidermolytic palmoplantar keratoderma of Vorner

KRT1 KRT9

8.84e-0531612C0343110
DiseaseKeratoderma, Palmoplantar, Epidermolytic

KRT1 KRT9

8.84e-0531612C1721006
Diseaseuterine fibroid

COL3A1 KCTD8 ERBIN DMRT1 FUBP3 PCDH7 MEX3B

1.16e-041991617EFO_0000731
Diseasemultiple sclerosis

KRT9 PDE4A GALC EPPK1 TENT4A RASGEF1A CLSTN2 SOX8 TEF USP31 PDZRN4

4.41e-0459416111MONDO_0005301
Diseasesleep duration

KCTD8 HACD2 GRM5 KCNQ5 AUTS2 PAM ERC2 SHISA6

8.77e-043621618EFO_0005271
Diseaseresponse to tamoxifen

TCF20 TEF

1.04e-0391612EFO_0009391
Diseaseperiodontitis

KRT9 EPPK1 KCNQ5 TTLL11 OSBPL10 ERC2

1.45e-032231616EFO_0000649
Diseaseneutrophil count, mean platelet volume, leukocyte count, erythrocyte count, mean corpuscular hemoglobin concentration, mean corpuscular volume, monocyte count, obsolete_red blood cell distribution width, basophil count, platelet count, eosinophil count

TTLL11 PDZRN4

1.58e-03111612EFO_0004305, EFO_0004308, EFO_0004309, EFO_0004526, EFO_0004528, EFO_0004584, EFO_0004833, EFO_0004842, EFO_0005090, EFO_0005091, EFO_0005192
DiseaseAmelogenesis Imperfecta

COL17A1 LTBP3

1.88e-03121612C0002452
Diseasemotion sickness

HOXB-AS3 AUTS2 PDZRN4

2.30e-03481613EFO_0006928
DiseaseMalignant neoplasm of breast

NR2F6 RBM3 FOXA1 ALS2CL RUFY1 DDX3X DES KRT76 INA MAP3K13 LZTS2 TSC22D4 ZBTB3 CTU1

2.34e-03107416114C0006142
DiseaseS-7-hydroxywarfarin measurement

SLC25A46 POLR2M OSBPL10 SHISA6

3.15e-031101614EFO_0803329
DiseaseKeratoderma, Palmoplantar

KRT1 KRT9

3.38e-03161612C4551675
Diseasebehavioural inhibitory control measurement

TTLL11 ZBTB10

3.38e-03161612EFO_0008467
Diseasecognitive function measurement, self reported educational attainment

TCF20 CLSTN2 PCDH17 FAM120A AUTS2 PAM OGA

3.46e-033551617EFO_0004784, EFO_0008354
Diseaseneuroticism measurement, cognitive function measurement

GRM5 CCDC85A PCDH17 FAM120A TTLL11 OSBPL10 AUTS2 OGA SHISA6

4.03e-035661619EFO_0007660, EFO_0008354
DiseaseChild Behaviour Checklist assessment

NKX2-6 DMRT1

4.27e-03181612EFO_0005661
DiseaseCongenital hernia of foramen of Morgagni

DES KCNQ5

4.76e-03191612C0265699
DiseaseCongenital hernia of foramen of Bochdalek

DES KCNQ5

4.76e-03191612C0265700
Diseasearterial stiffness measurement

TCF20 MAP3K13 LSM14B

5.21e-03641613EFO_0004517
DiseaseOsteoarthritis of hip

LTBP3 DMP1

5.27e-03201612C0029410

Protein segments in the cluster

PeptideGeneStartEntry
FTLEGSFGSGAGRGL

ALS2CL

551

Q60I27
LGAGGAFGEAAGDRG

COL17A1

1321

Q9UMD9
ELGFSISGGVGGRGN

ERBIN

1331

Q96RT1
GGGGSGFISGRRSRS

MLLT6

206

P55198
SRGGGGAVSERGGAG

AMER2

6

Q8N7J2
AGIGRTGRGMGGLFS

AFG3L2

276

Q9Y4W6
FRGSGGGRGASDRDA

ADO

21

Q96SZ5
GSGRATGGERGLRGC

ADAMTS8

86

Q9UP79
SARLSGAGGAGGFRS

INA

26

Q16352
GAGGAGGFRSQSLSR

INA

31

Q16352
RRRAGAEGGAGGADG

ADRA2C

306

P18825
GGGSGGLASARRAAE

GSR

71

P00390
SGRVLGRFRGKGSGG

PAM

906

P19021
GRFRGKGSGGLNLGN

PAM

911

P19021
RKGFGSSGLRFGRGG

SLC22A18AS

76

Q8N1D0
GSGSRGQEEAGAGGR

ACSS2

11

Q9NR19
GVGSGSGGGGDSRQR

CLSTN2

16

Q9H4D0
SDRGGRGHGLRGAFS

DNAJB8

121

Q8NHS0
GSGGASRGAGTGLSE

ERMP1

56

Q7Z2K6
RFARAAGGHGGEAGS

ANKRD63

221

C9JTQ0
AASGGLGLGLGGRSA

MSANTD2

61

Q6P1R3
REAGFGSLGQGGRGL

RNF212B

186

A8MTL3
RRGSGNFGGGRGDGF

HNRNPA1L2

196

Q32P51
RGDGFGGNDNFGRGG

HNRNPA1L2

206

Q32P51
GGGESRSSSRGGGGE

RBM15

136

Q96T37
RLRSRGGCASGLGGG

PDZRN4

111

Q6ZMN7
HAGKSARGTRGGGFG

RBM3

81

P98179
RGSEVHNAGGGGGDR

NKX2-6

51

A6NCS4
AAAGRFGAGGGAAGA

NR2F6

181

P10588
AERGGGGRSKSGSYR

PCDH17

51

O14917
LSLRGGGSSGALRGG

HJV

51

Q6ZVN8
TGSGRLSGGGTGFVA

KRT26

16

Q7Z3Y9
VAAGSSRAGGFGGGR

KRT76

71

Q01546
GIGSRGDRSGFGKFE

DDX3X

106

O00571
AGGGAAGAAGAGRRD

LARP1

101

Q6PKG0
TGSEGGDGGGHRARA

INKA1

206

Q96EL1
SGFRDDFLGGRGGSR

EIF4H

156

Q15056
GGGGGAQDKRSGFLT

KCTD8

196

Q6ZWB6
TESRGLGAGAGAGGS

GRM5

956

P41594
GGRVAGGLLGSGTRA

LZTS2

286

Q9BRK4
AGGDGHRGGDGAVRS

MAP7

6

Q14244
GGAEAGGAASDGSRG

JMY

66

Q8N9B5
RFQAAGGGAESGKRG

HOXB-AS3

16

C0HLZ6
VGLYGARGGGIGDRD

ALAS1

416

P13196
GSSRVCGRGGGGSFG

KRT9

56

P35527
RSSRGGFRGGRGNGT

LSM14B

356

Q9BX40
AAGGSRAGGFGGGRS

KRT3

71

P12035
AGGALLGRALGGFGF

KRT79

76

Q5XKE5
LGRALGGFGFGSRAF

KRT79

81

Q5XKE5
GAAAAAAGGGRLGSG

KCNQ5

21

Q9NR82
ATLGGGGGGLRESRR

KCNQ5

66

Q9NR82
GAGGAGRARGNSFTK

LENG8

386

Q96PV6
GGGGGRSATTAGSRA

COL23A1

21

Q86Y22
ASAEASRGGGGAGAF

PDCD7

66

Q8N8D1
GASGGGGGARAEVLF

IGFBP2

26

P18065
TRRSGGGGGRFSSCG

KRT1

36

P04264
GGGSGGSKRRLDASE

PCDH7

216

O60245
GSGGAGGGSSRRFEA

PDE4A

96

P27815
GRRGLGAGAGAGEES

PGRMC2

76

O15173
VGRSGSGHFGSGERA

HOXA5

56

P20719
ERDGFGGLAAARGRG

FUBP3

326

Q96I24
GNGSLDLGGDSAGRS

HNRNPU

56

Q00839
GSLLFSEGGAGRGGA

NRXN2

261

Q9P2S2
LFSQGRRAGGGAGSH

NRXN2

531

Q9P2S2
GAGAAGGGGAGRTRA

AUTS2

31

Q8WXX7
GGGGAGRTRALSLAS

AUTS2

36

Q8WXX7
GEGGGSSFAEFGGRN

KRT24

451

Q2M2I5
GGTGSVRLSSGGAGF

KRT27

16

Q7Z3Y8
GSLGDGSSGFLGPDR

KIF26A

1151

Q9ULI4
GRGGTGGARRLSCGA

NAGS

21

Q8N159
SQGRGRGFAGVCGFG

FAM120A

881

Q9NZB2
RLGHRRTSSGGGGGT

ERC2

26

O15083
RLAGGFSRSTGKGGD

DMP1

86

Q13316
AARGGAGGGGRVERD

EN1

131

Q05925
FRGSLASLGSRGGGS

HCN4

96

Q9Y3Q4
AAAAGAAGRGSGGLG

TENT4A

31

Q5XG87
AATSGRGGRGGARGE

INO80B

246

Q9C086
GSHGRFGARGVREGG

REXO2

16

Q9Y3B8
SGARGGESAGLKGAR

FAM171A2

431

A8MVW0
AGGGGFRFEGSPGLR

PCF11

841

O94913
SRSGSGSGGFLEGLF

MAP3K13

121

O43283
SNLGRSRAGGGGDAK

FOXA1

146

P55317
FGSALRGGRDLDGNG

ITGA5

456

P08648
AGAGGLERFSGGGRS

C6orf132

1046

Q5T0Z8
RAAGGGDGARRFGSQ

ECI1

31

P42126
GGAGAERDRGGASGF

CACNG8

351

Q8WXS5
GAGSCRLGSAGGLGS

KRT17

36

Q04695
SSGSAESGAGGGRRA

BORCS6

181

Q96GS4
SRGLGAAEFGGAAGN

POLR2M

51

Q6EEV4
RGDAGRLARGGGLGS

CTU1

186

Q7Z7A3
GGGRAGAGDASGTRK

HACD2

16

Q6Y1H2
ADRGLGEALGGLFGG

CAPNS2

11

Q96L46
GGAGGLGSLRASRLG

DES

61

P17661
GGGSDEGLASAAARG

CDKN2B

11

P42772
GGGAGAARSLSRFRG

ADPRS

11

Q9NX46
SGGSGGGSREGTLRR

CCDC85A

381

Q96PX6
AALGSRGRGATGGAG

MAP3K12

616

Q12852
GLLGTGREGTSGRGG

MAP3K12

676

Q12852
GREGTSGRGGSRAGS

MAP3K12

681

Q12852
AGERGAGGGGALARE

LTBP3

46

Q9NS15
GGGFGGRRGSRTLVS

GPR161

496

Q8N6U8
ALFSGRGAATGGRQG

CLPB

61

Q9H078
AAGARGNDGARGSDG

COL3A1

316

P02461
GGSRGRSDRGSGQGD

EMC4

26

Q5J8M3
AEGSGGSGVGIGDRF

EMC7

31

Q9NPA0
DARAGSGAGAAGLGT

E4F1

291

Q66K89
GAGSIREAGGAFGKR

ATP5IF1

36

Q9UII2
LGREFDGIGAVSGGG

GALC

51

P54803
RYLGGSGGAGGRLTR

SAMD1

256

Q6SPF0
RAAGGSGAGGGVAAA

SALL3

186

Q9BXA9
RYARGAAGRGAAGLG

EPB41L4B

16

Q9H329
GAGSEDSGDRGGTLG

RING1

226

Q06587
GRAGGFGKASGALVG

DMRT1

26

Q9Y5R6
AGSAGGGADFRGELA

ONECUT3

71

O60422
GDVFRGGGRSGGGLA

NYAP1

221

Q6ZVC0
FADLERNGSGGGGGG

MEX3B

6

Q6ZN04
SARRMDGGSGGLGSG

MTCH1

61

Q9NZJ7
GGSGGAGRGGAASRV

SYN1

101

P17600
SLASLDRGQGRGGGG

REXO1

181

Q8N1G1
RKRTFSLQGGGGGGA

SKOR1

276

P84550
SSQGRGGRAAGGAGR

SRRM3

371

A6NNA2
RTAGSIAREGGGGAG

PLEKHH3

611

Q7Z736
GSGDAGGAGGRAGRA

SCRT2

131

Q9NQ03
GGDARRGFLGSGYSS

SYNM

391

O15061
GIRGASGGAGGRSLD

TSC22D4

111

Q9Y3Q8
RLFEGSGEARGGGRS

LTB4R2

306

Q9NPC1
AARGAEEARGGGGGL

NKX1-1

206

Q15270
GGAAVAGAAGGARRF

OGA

46

O60502
STGFSRRGSGRGGGP

PLEKHA4

731

Q9H4M7
DGSLAGTGGLDAFGR

PRPF4

376

O43172
RAAAGLGGGDSGDGT

RUFY1

86

Q96T51
LGGGDSGDGTARAAS

RUFY1

91

Q96T51
GGGGGRTLAQAAGAA

GDF7

46

Q7Z4P5
AGRGDGDSGRSQREG

EPPK1

2601

P58107
SGAGGPAGRGLSGAR

SIN3B

11

O75182
SAGGAAVGGRRAGGA

SHISA6

36

Q6ZSJ9
GPGRAAGERGLSGSF

TEF

21

Q10587
GFLIFRSFGGGTGSG

TUBAL3

141

A6NHL2
SGGGRGRGGGDSDSA

SOWAHC

231

Q53LP3
EGSSGGARRRGSGGG

RFXAP

121

O00287
GLGRAGVAVGGARGD

SOX8

41

P57073
SSRSAAAGLGGGGSR

OSBPL10

41

Q9BXB5
FAVATGGRGSGGLAG

SP9

66

P0CG40
MSGRGSFAPGGASRG

SAFB

871

Q15424
SDNRSRGYRGGSAGG

CIRBP

86

Q14011
RGGGDRGYGGNRFES

CIRBP

116

Q14011
ANGTAGGGGGARAAA

ZNRF2

31

Q8NHG8
GGGGGARAAAAGRFP

ZNRF2

36

Q8NHG8
SDHGNGLGRGTRGSG

TTLL11

46

Q8NHH1
GLGGDAGTADGRGRT

ZCWPW1

491

Q9H0M4
GGARGSAGGRGEAAA

XKR7

21

Q5GH72
RREEESGGGGGSAGL

ZCCHC3

61

Q9NUD5
ERGGGAGGGSGDLIF

RASGEF1A

26

Q8N9B8
YGGGGRSLDANSSGR

RBMXL3

741

Q8N7X1
SGRGGNFGFGDSRGG

HNRNPA2B1

201

P22626
GGGSGGRRFSNVGLV

SRCIN1

36

Q9C0H9
GAGSRGSRGGRGAAG

SHC2

101

P98077
GSRGGRGAAGSGDAA

SHC2

106

P98077
GLGYRGGARDEQGFG

SLC25A46

11

Q96AG3
SGAAKGGRGGARGSA

SPRN

21

Q5BIV9
ERNGGFGELGCFGGS

MEX3A

11

A1L020
GGGRRVLSGGGRTAF

SPANXA2-OT1

36

Q8N9U9
VLSGGGRTAFGGGGR

SPANXA2-OT1

41

Q8N9U9
GRTAFGGGGRTAFGD

SPANXA2-OT1

46

Q8N9U9
GGGGRTAFGDGGRTA

SPANXA2-OT1

51

Q8N9U9
TAFGDGGRTAFGVGG

SPANXA2-OT1

56

Q8N9U9
GGRTAFGVGGRTAFG

SPANXA2-OT1

61

Q8N9U9
FGVGGRTAFGGGGRT

SPANXA2-OT1

66

Q8N9U9
RTAFGGGGRTAFGGG

SPANXA2-OT1

71

Q8N9U9
GGGRTAFGGGGRTAF

SPANXA2-OT1

76

Q8N9U9
AFGGGGRTAFGVGGR

SPANXA2-OT1

81

Q8N9U9
GRTAFGVGGRTAFGG

SPANXA2-OT1

86

Q8N9U9
GVGGRTAFGGGERVS

SPANXA2-OT1

91

Q8N9U9
RFMDSAGGGAGGSLR

TRIL

786

Q7L0X0
RAAGDGRGGAGSGNC

ZNF654

31

Q8IZM8
SRGGVAGRGGFAQGG

SAFB2

896

Q14151
SGSGSGGGRRGAAAA

TCF20

51

Q9UGU0
MGRAAATAGGGGGAR

UNC5D

1

Q6UXZ4
DRGEGDGQGRGGGSS

USP20

291

Q9Y2K6
GGGGGSRFEFQSLLS

PLPP6

31

Q8IY26
SAFSRGRGGGEGRGS

SEC16B

971

Q96JE7
AESGGGGGRCGDRSG

VAX2

16

Q9UIW0
GDRSGAGDLRADGGG

VAX2

26

Q9UIW0
FGELVLEGAFRGGGG

PLEKHG2

311

Q9H7P9
LAFRGGGLVTASGGG

ZBTB10

11

Q96DT7
RTLAFRGGGGGGLGN

ZBTB10

121

Q96DT7
RLFRSGRAGGGGAGG

USP31

26

Q70CQ4
RDFEFDARGGGGTGG

ZC3H10

161

Q96K80
NRGGFRGGFGSGIRG

RPS2

21

P15880
SRGGFSGNRGGRGAF

VIRMA

1686

Q69YN4
GSRGKFVSGGSGRGR

VIRMA

1791

Q69YN4
GGGSSDGSGRAAGRR

TERF2

46

Q15554
NRGGMTRNRGAGGFG

ALYREF

196

Q86V81
RAQRGGGGSGSGSED

TMPPE

311

Q6ZT21
RGAVGRYRGATGGDL

ZBTB3

26

Q9H5J0
RGGGRLGGFVGTAFG

KRT72

66

Q14CN4
AAGRGAGAGFGSRSL

KRT74

36

Q7RTS7
AGGSRGVRSGALRGG

JPH3

536

Q8WXH2
AGRGGAAGTAGVGET

MYOZ1

151

Q9NP98