Cluster composition

Functions

Category	Name	IntersectionWithQuery	PValue	GenesInTerm	GenesInQuery	GenesInTermInQuery	ID
GeneOntologyMolecularFunction	1-phosphatidylinositol-4-phosphate 5-kinase activity	PIKFYVE PIP5K1B PIP5K1C	3.56e-06	9	71	3	GO:0016308
GeneOntologyMolecularFunction	1-phosphatidylinositol-3-phosphate 5-kinase activity	PIKFYVE PIP5K1B	3.73e-05	3	71	2	GO:0000285
GeneOntologyMolecularFunction	1-phosphatidylinositol-5-kinase activity	PIKFYVE PIP5K1B	3.73e-05	3	71	2	GO:0052810
GeneOntologyMolecularFunction	cAMP binding	PDE2A CNBD2 CNGB1	9.37e-05	25	71	3	GO:0030552
GeneOntologyMolecularFunction	phosphatidylinositol kinase activity	PIKFYVE PIP5K1B PIP5K1C	1.06e-04	26	71	3	GO:0052742
GeneOntologyMolecularFunction	cyclic nucleotide binding	PDE2A CNBD2 CNGB1	3.59e-04	39	71	3	GO:0030551
GeneOntologyMolecularFunction	lipid kinase activity	PIKFYVE PIP5K1B PIP5K1C	4.17e-04	41	71	3	GO:0001727
GeneOntologyMolecularFunction	molecular sensor activity	MSH6 MICU3 NDUFS2	7.49e-04	50	71	3	GO:0140299
GeneOntologyMolecularFunction	intracellularly cyclic nucleotide-activated monoatomic cation channel activity	KCNA10 CNGB1	9.48e-04	13	71	2	GO:0005221
GeneOntologyMolecularFunction	cyclic nucleotide-activated monoatomic ion channel activity	KCNA10 CNGB1	9.48e-04	13	71	2	GO:0043855
GeneOntologyMolecularFunction	cGMP binding	PDE2A CNGB1	1.45e-03	16	71	2	GO:0030553
GeneOntologyBiologicalProcess	proximal/distal pattern formation	HOXA9 HOXA10 HOXB9 HOXC9 HOXD9 HOXD10	2.63e-09	37	70	6	GO:0009954
GeneOntologyBiologicalProcess	embryonic skeletal system development	XYLT1 HOXA9 HOXB9 PCGF2 HOXC9 HOXD9 HOXD10	6.98e-07	148	70	7	GO:0048706
GeneOntologyBiologicalProcess	anterior/posterior pattern specification	HOXA9 HOXA10 HOXB9 PPP2R3A PCGF2 HOXC9 HOXD9 HOXD10	1.88e-06	247	70	8	GO:0009952
GeneOntologyBiologicalProcess	embryonic skeletal system morphogenesis	HOXA9 HOXB9 PCGF2 HOXC9 HOXD9 HOXD10	1.89e-06	109	70	6	GO:0048704
GeneOntologyBiologicalProcess	pattern specification process	HOXA9 HOXA10 HOXB9 PPP2R3A PCGF2 HOXC9 HOXD9 HOXD10 SIM2	6.95e-05	526	70	9	GO:0007389
GeneOntologyBiologicalProcess	embryo development	XYLT1 HOXA9 HOXA10 GRXCR2 HOXB9 PPP2R3A PCGF2 HOXC9 BRD2 HOXD9 HOXD10 AATF TIMELESS SIM2 SOS1	7.74e-05	1437	70	15	GO:0009790
GeneOntologyBiologicalProcess	embryonic morphogenesis	HOXA9 HOXA10 GRXCR2 HOXB9 PCGF2 HOXC9 BRD2 HOXD9 HOXD10 SOS1	1.39e-04	713	70	10	GO:0048598
GeneOntologyBiologicalProcess	embryonic organ morphogenesis	HOXA9 GRXCR2 HOXB9 PCGF2 HOXC9 HOXD9 HOXD10	1.86e-04	351	70	7	GO:0048562
GeneOntologyBiologicalProcess	regionalization	HOXA9 HOXA10 HOXB9 PPP2R3A PCGF2 HOXC9 HOXD9 HOXD10	2.10e-04	478	70	8	GO:0003002
GeneOntologyBiologicalProcess	skeletal system development	XYLT1 HOXA9 HOXA10 HOXB9 PCGF2 HOXC9 HOXD9 HOXD10 ANO6	2.26e-04	615	70	9	GO:0001501
GeneOntologyBiologicalProcess	cellular response to cGMP	PDE2A PDE3A	2.36e-04	7	70	2	GO:0071321
GeneOntologyBiologicalProcess	synaptic vesicle endocytosis	SNAP91 AP3B2 SYT5 PIP5K1C	3.19e-04	96	70	4	GO:0048488
GeneOntologyBiologicalProcess	skeletal system morphogenesis	HOXA9 HOXB9 PCGF2 HOXC9 HOXD9 HOXD10	3.55e-04	277	70	6	GO:0048705
GeneOntologyBiologicalProcess	presynaptic endocytosis	SNAP91 AP3B2 SYT5 PIP5K1C	4.02e-04	102	70	4	GO:0140238
GeneOntologyBiologicalProcess	response to cGMP	PDE2A PDE3A	4.02e-04	9	70	2	GO:0070305
GeneOntologyBiologicalProcess	sexual reproduction	HOXA9 HOXA10 MSH6 PDE3A BRD2 STYX HOXD9 HOXD10 UMODL1 CSNK2A2 CNBD2 EIF4G3 SOS1	4.16e-04	1312	70	13	GO:0019953
MousePheno	lumbar vertebral transformation	HOXA9 HOXA10 PCGF2 HOXC9 HOXD9	8.18e-07	41	60	5	MP:0004616
MousePheno	increased rib number	HOXA9 HOXA10 HOXB9 HOXC9 BRD2	1.04e-06	43	60	5	MP:0000480
MousePheno	vertebral transformation	HOXA9 HOXA10 HOXB9 PCGF2 HOXC9 HOXD9	7.34e-06	110	60	6	MP:0003036
MousePheno	abnormal rib morphology	XYLT1 HOXA9 HOXA10 HOXB9 PCGF2 HOXC9 BRD2 ANO6	1.31e-05	257	60	8	MP:0000150
MousePheno	abnormal rib joint morphology	HOXA10 HOXB9 PCGF2 HOXC9 BRD2	3.28e-05	86	60	5	MP:0004625
MousePheno	sacral vertebral transformation	HOXA10 PCGF2 HOXD9	4.05e-05	16	60	3	MP:0004617
MousePheno	abnormal sternocostal joint morphology	HOXA10 HOXB9 PCGF2 HOXC9	1.33e-04	61	60	4	MP:0008148
MousePheno	abnormal lumbar vertebrae morphology	HOXA9 HOXA10 PCGF2 HOXC9 HOXD9	1.54e-04	119	60	5	MP:0003049
MousePheno	abnormal synovial joint morphology	HOXA10 HOXB9 PCGF2 HOXC9 BRD2	1.87e-04	124	60	5	MP:0030804
MousePheno	abnormal sacral vertebrae morphology	HOXA10 PCGF2 HOXD9 HOXD10	2.03e-04	68	60	4	MP:0003050
MousePheno	short ribs	XYLT1 HOXA10 ANO6	2.28e-04	28	60	3	MP:0004672
MousePheno	abnormal joint morphology	HOXA10 HOXB9 PCGF2 HOXC9 BRD2 HOXD9 HOXD10 ANO6	2.77e-04	397	60	8	MP:0002932
Domain	HXA9/HXB9/HXC9	HOXA9 HOXB9 HOXC9 HOXD9	2.03e-10	4	72	4	IPR017112
Domain	Hox9_act	HOXA9 HOXB9 HOXC9 HOXD9	2.03e-10	4	72	4	PF04617
Domain	Hox9_activation_N	HOXA9 HOXB9 HOXC9 HOXD9	2.03e-10	4	72	4	IPR006711
Domain	Homeobox_metazoa	HOXA9 HOXA10 HOXB9 HOXC9 HOXD9 HOXD10	1.28e-06	90	72	6	IPR020479
Domain	PIPKc	PIKFYVE PIP5K1B PIP5K1C	3.03e-06	8	72	3	SM00330
Domain	-	PIKFYVE PIP5K1B PIP5K1C	3.03e-06	8	72	3	3.30.800.10
Domain	PIP5K	PIKFYVE PIP5K1B PIP5K1C	3.03e-06	8	72	3	PF01504
Domain	PIPK	PIKFYVE PIP5K1B PIP5K1C	3.03e-06	8	72	3	PS51455
Domain	PInositol-4-P-5-kinase_N	PIKFYVE PIP5K1B PIP5K1C	3.03e-06	8	72	3	IPR027484
Domain	PInositol-4-P-5-kinase_C	PIKFYVE PIP5K1B PIP5K1C	3.03e-06	8	72	3	IPR027483
Domain	-	PIKFYVE PIP5K1B PIP5K1C	3.03e-06	8	72	3	3.30.810.10
Domain	PInositol-4-P-5-kinase_core	PIKFYVE PIP5K1B PIP5K1C	3.03e-06	8	72	3	IPR002498
Domain	DUF4939	RTL8B RTL8A RTL8C	6.47e-06	10	72	3	PF16297
Domain	DUF4939	RTL8B RTL8A RTL8C	6.47e-06	10	72	3	IPR032549
Domain	LDOC1-rel	RTL8B RTL8A RTL8C	8.87e-06	11	72	3	IPR032567
Domain	-	HOXA9 HOXA10 HOXB9 HOXC9 HOXD9 HOXD10 SMARCA1 TTF1	1.30e-05	283	72	8	1.10.10.60
Domain	Homeodomain-like	HOXA9 HOXA10 HOXB9 HOXC9 HOXD9 HOXD10 SMARCA1 TTF1	4.08e-05	332	72	8	IPR009057
Domain	Homeobox_CS	HOXA9 HOXA10 HOXB9 HOXC9 HOXD9 HOXD10	8.15e-05	186	72	6	IPR017970
Domain	HTH_motif	HOXA9 HOXB9 HOXC9 HOXD9	1.45e-04	69	72	4	IPR000047
Domain	MA3	NOM1 EIF4G3	2.18e-04	6	72	2	SM00544
Domain	MA3	NOM1 EIF4G3	2.18e-04	6	72	2	PF02847
Domain	MI	NOM1 EIF4G3	2.18e-04	6	72	2	PS51366
Domain	Initiation_fac_eIF4g_MI	NOM1 EIF4G3	2.18e-04	6	72	2	IPR003891
Domain	Homeobox	HOXA9 HOXA10 HOXB9 HOXC9 HOXD9 HOXD10	2.84e-04	234	72	6	PF00046
Domain	HOMEOBOX_1	HOXA9 HOXA10 HOXB9 HOXC9 HOXD9 HOXD10	2.98e-04	236	72	6	PS00027
Domain	PInositol-4-P-5-kinase	PIP5K1B PIP5K1C	3.04e-04	7	72	2	IPR023610
Domain	HOX	HOXA9 HOXA10 HOXB9 HOXC9 HOXD9 HOXD10	3.04e-04	237	72	6	SM00389
Domain	HOMEOBOX_2	HOXA9 HOXA10 HOXB9 HOXC9 HOXD9 HOXD10	3.18e-04	239	72	6	PS50071
Domain	Homeobox_dom	HOXA9 HOXA10 HOXB9 HOXC9 HOXD9 HOXD10	3.18e-04	239	72	6	IPR001356
Domain	MIF4G	NOM1 EIF4G3	6.46e-04	10	72	2	SM00543
Domain	MIF4G	NOM1 EIF4G3	6.46e-04	10	72	2	PF02854
Domain	MIF4G-like_typ-3	NOM1 EIF4G3	6.46e-04	10	72	2	IPR003890
Domain	MIF4-like	NOM1 EIF4G3	1.49e-03	15	72	2	IPR016021
Domain	-	NOM1 EIF4G3	1.49e-03	15	72	2	1.25.40.180
Domain	MAM_1	MEP1A MAMDC2	1.70e-03	16	72	2	PS00740
Domain	cNMP-bd_CS	CNBD2 CNGB1	1.70e-03	16	72	2	IPR018488
Domain	MAM	MEP1A MAMDC2	1.92e-03	17	72	2	SM00137
Domain	MAM	MEP1A MAMDC2	2.15e-03	18	72	2	PF00629
Domain	MAM_dom	MEP1A MAMDC2	2.15e-03	18	72	2	IPR000998
Domain	MAM_2	MEP1A MAMDC2	2.15e-03	18	72	2	PS50060
Domain	PDEase_I	PDE2A PDE3A	2.94e-03	21	72	2	PF00233
Domain	PDEASE_I	PDE2A PDE3A	2.94e-03	21	72	2	PS00126
Domain	PDEase_CS	PDE2A PDE3A	2.94e-03	21	72	2	IPR023174
Domain	DEP	PIKFYVE DEPDC7	3.22e-03	22	72	2	PF00610
Domain	DEP	PIKFYVE DEPDC7	3.22e-03	22	72	2	PS50186
Domain	-	PDE2A PDE3A	3.22e-03	22	72	2	1.10.1300.10
Domain	DEP	PIKFYVE DEPDC7	3.22e-03	22	72	2	SM00049
Domain	DEP_dom	PIKFYVE DEPDC7	3.52e-03	23	72	2	IPR000591
Domain	PDEase_catalytic_dom	PDE2A PDE3A	3.52e-03	23	72	2	IPR002073
Domain	HDc	PDE2A PDE3A	3.83e-03	24	72	2	SM00471
Domain	HD/PDEase_dom	PDE2A PDE3A	3.83e-03	24	72	2	IPR003607
Domain	CNMP_BINDING_1	CNBD2 CNGB1	6.75e-03	32	72	2	PS00888
Domain	CNMP_BINDING_2	CNBD2 CNGB1	6.75e-03	32	72	2	PS00889
Domain	cNMP	CNBD2 CNGB1	7.59e-03	34	72	2	SM00100
Domain	cNMP_binding	CNBD2 CNGB1	7.59e-03	34	72	2	PF00027
Pubmed	A Hox Code Defines Spinocerebellar Neuron Subtype Regionalization.	HOXA9 HOXA10 HOXB9 HOXC9 HOXD9 HOXD10	5.01e-13	16	72	6	31747609
Pubmed	Hox patterning of the vertebrate rib cage.	HOXA9 HOXA10 HOXB9 HOXC9 HOXD9 HOXD10	7.73e-13	17	72	6	17626057
Pubmed	Control of Hoxd gene transcription in the mammary bud by hijacking a preexisting regulatory landscape.	HOXA9 HOXB9 HOXC9 HOXD9 HOXD10	2.58e-11	12	72	5	27856734
Pubmed	Axial Hox9 activity establishes the posterior field in the developing forelimb.	HOXA9 HOXB9 HOXC9 HOXD9 HOXD10	2.58e-11	12	72	5	21383175
Pubmed	The human HOX gene family.	HOXA9 HOXA10 HOXB9 HOXC9 HOXD9 HOXD10	2.91e-11	29	72	6	2574852
Pubmed	Sf3b4 regulates chromatin remodeler splicing and Hox expression.	HOXA9 HOXA10 HOXB9 HOXC9 HOXD9 HOXD10	5.52e-11	32	72	6	37167859
Pubmed	Ndrg2 regulates vertebral specification in differentiating somites.	HOXA9 HOXA10 HOXB9 HOXC9 HOXD9 HOXD10	5.52e-11	32	72	6	22819676
Pubmed	Hox genes and the evolution of vertebrate axial morphology.	HOXA9 HOXB9 HOXC9 HOXD9 HOXD10	1.42e-10	16	72	5	7768176
Pubmed	Atlas of Hox gene expression in the developing kidney.	HOXA9 HOXA10 HOXB9 HOXC9 HOXD9 HOXD10	1.67e-10	38	72	6	15042701
Pubmed	Complete mutation analysis panel of the 39 human HOX genes.	HOXA9 HOXA10 HOXB9 HOXC9 HOXD9 HOXD10	1.67e-10	38	72	6	11857506
Pubmed	Lysine demethylase 7a regulates murine anterior-posterior development by modulating the transcription of Hox gene cluster.	HOXA9 HOXA10 HOXB9 HOXC9 HOXD9 HOXD10	1.97e-10	39	72	6	33257809
Pubmed	Quantification of Hox and surfactant protein-B transcription during murine lung development.	HOXA9 HOXA10 HOXB9 HOXC9 HOXD9 HOXD10	2.31e-10	40	72	6	19204410
Pubmed	Lin28a/let-7 pathway modulates the Hox code via Polycomb regulation during axial patterning in vertebrates.	HOXA9 HOXA10 HOXB9 HOXC9 HOXD9 HOXD10	2.70e-10	41	72	6	32479258
Pubmed	Reduction of Hox gene expression by histone H1 depletion.	HOXA9 HOXA10 HOXB9 HOXC9 HOXD9 HOXD10	3.65e-10	43	72	6	22701719
Pubmed	Nomenclature for human homeobox genes.	HOXA9 HOXA10 HOXB9 HOXC9 HOXD9 HOXD10	4.22e-10	44	72	6	1973146
Pubmed	Vertebrate homeobox gene nomenclature.	HOXA9 HOXA10 HOXB9 HOXC9 HOXD9 HOXD10	6.39e-10	47	72	6	1358459
Pubmed	New insights into the role of Jmjd3 and Utx in axial skeletal formation in mice.	HOXA9 HOXA10 HOXB9 HOXC9 HOXD9 HOXD10	9.41e-10	50	72	6	28188179
Pubmed	Recombineering-based dissection of flanking and paralogous Hox gene functions in mouse reproductive tracts.	HOXA9 HOXA10 HOXD9 HOXD10	5.51e-09	11	72	4	23760953
Pubmed	A low-copy repeat in Xq26 represents a novel putatively prenylated protein gene (CXX1) and its pseudogenes (DXS9914, DXS9915, and DXS9916).	RTL8B RTL8A RTL8C	8.51e-09	3	72	3	9403077
Pubmed	Global control of motor neuron topography mediated by the repressive actions of a single hox gene.	HOXA9 HOXB9 HOXC9 HOXD9 HOXD10	1.18e-08	36	72	5	20826310
Pubmed	Paralogous mouse Hox genes, Hoxa9, Hoxb9, and Hoxd9, function together to control development of the mammary gland in response to pregnancy.	HOXA9 HOXB9 HOXD9	3.40e-08	4	72	3	9892669
Pubmed	Multiple enhancers regulate Hoxd genes and the Hotdog LncRNA during cecum budding.	HOXA9 HOXA10 HOXD9 HOXD10	3.94e-08	17	72	4	24075990
Pubmed	Gli3 and Plzf cooperate in proximal limb patterning at early stages of limb development.	HOXA9 HOXA10 HOXD9 HOXD10	5.05e-08	18	72	4	16015334
Pubmed	The HOX homeodomain proteins block CBP histone acetyltransferase activity.	HOXA9 HOXA10 HOXB9 HOXD10	5.05e-08	18	72	4	11585930
Pubmed	The emergent landscape of the mouse gut endoderm at single-cell resolution.	HOXA9 HOXA10 HOXB9 HOXC9 HOXD9	5.27e-08	48	72	5	30959515
Pubmed	Shox2 regulates progression through chondrogenesis in the mouse proximal limb.	HOXA9 HOXA10 HOXD9 HOXD10	6.39e-08	19	72	4	23038774
Pubmed	Pbx1/Pbx2 requirement for distal limb patterning is mediated by the hierarchical control of Hox gene spatial distribution and Shh expression.	HOXA9 HOXA10 HOXD9 HOXD10	1.45e-07	23	72	4	16672333
Pubmed	Rac controls PIP5K localisation and PtdIns(4,5)P₂ synthesis, which modulates vinculin localisation and neurite dynamics.	PIKFYVE PIP5K1B PIP5K1C	1.69e-07	6	72	3	20841379
Pubmed	RTL8 promotes nuclear localization of UBQLN2 to subnuclear compartments associated with protein quality control.	RTL8B RTL8A RTL8C	1.69e-07	6	72	3	35247097
Pubmed	Targeted disruption of the mouse homologue of the Drosophila polyhomeotic gene leads to altered anteroposterior patterning and neural crest defects.	HOXA9 HOXA10 HOXC9 HOXD9	1.74e-07	24	72	4	9367423
Pubmed	A dynamic expression survey identifies transcription factors relevant in mouse digestive tract development.	HOXA9 HOXA10 HOXB9 HOXC9 HOXD9 HOXD10	1.75e-07	118	72	6	16971476
Pubmed	Fine mapping of human HOX gene clusters.	HOXA9 HOXA10 HOXB9 HOXC9	2.44e-07	26	72	4	8646877
Pubmed	Localization of mRNAs for phosphatidylinositol phosphate kinases in the mouse brain during development.	PIKFYVE PIP5K1B PIP5K1C	2.96e-07	7	72	3	15018809
Pubmed	Btk-dependent regulation of phosphoinositide synthesis.	PIKFYVE PIP5K1B PIP5K1C	4.73e-07	8	72	3	15046600
Pubmed	Critical role of the p400/mDomino chromatin-remodeling ATPase in embryonic hematopoiesis.	HOXA9 HOXA10 HOXB9 HOXC9	5.81e-07	32	72	4	17535249
Pubmed	USP7 represses lineage differentiation genes in mouse embryonic stem cells by both catalytic and noncatalytic activities.	HOXA9 HOXB9 SAMD9L HOXD10 RTL8B MYO1F SMARCA1 DOCK10 RTL8A FBXO39	1.27e-06	674	72	10	37196079
Pubmed	A family of neofunctionalized Ty3/gypsy retrotransposon genes in mammalian genomes.	RTL8B RTL8A RTL8C	1.39e-06	11	72	3	16093683
Pubmed	Transposable elements as a source of genetic innovation: expression and evolution of a family of retrotransposon-derived neogenes in mammals.	RTL8B RTL8A RTL8C	1.39e-06	11	72	3	15716091
Pubmed	Cdx and T Brachyury Co-activate Growth Signaling in the Embryonic Axial Progenitor Niche.	HOXA9 HOXB9 HOXC9 HOXD9	1.46e-06	40	72	4	28009287
Pubmed	The cell-cycle regulator geminin inhibits Hox function through direct and polycomb-mediated interactions.	HOXA10 HOXC9 HOXD10	2.40e-06	13	72	3	14973489
Pubmed	Hox gene function in vertebrate gut morphogenesis: the case of the caecum.	HOXA10 HOXD9 HOXD10	2.40e-06	13	72	3	17942481
Pubmed	Organization and expression of mouse Hox3 cluster genes.	HOXA9 HOXA10 HOXC9	3.05e-06	14	72	3	8099712
Pubmed	Ex vivo Quantitative Proteomic Analysis of Serotonin Transporter Interactome: Network Impact of the SERT Ala56 Coding Variant.	PHKG1 MICU3 SNAP91 AP3B2 MYO1F SYT5 SIPA1L2 NDUFS2	3.07e-06	430	72	8	32581705
Pubmed	Altered transmission of HOX and apoptotic SNPs identify a potential common pathway for clubfoot.	HOXA9 HOXA10 HOXD9	3.80e-06	15	72	3	19938081
Pubmed	Mutually exclusive antiproliferative effect of cell line-specific HOX inhibition in epithelial ovarian cancer cell lines: SKOV-3 vs RMUG-S.	HOXA10 HOXB9	4.23e-06	2	72	2	31970886
Pubmed	Differential regulation of human platelet responses by cGMP inhibited and stimulated cAMP phosphodiesterases.	PDE2A PDE3A	4.23e-06	2	72	2	12038792
Pubmed	Hoxa10 and Hoxd10 coordinately regulate lumbar motor neuron patterning.	HOXA10 HOXD10	4.23e-06	2	72	2	12918017
Pubmed	Epigenetic Regulation of Phosphodiesterases 2A and 3A Underlies Compromised β-Adrenergic Signaling in an iPSC Model of Dilated Cardiomyopathy.	PDE2A PDE3A	4.23e-06	2	72	2	26095046
Pubmed	The beta- and gamma-isoforms of type I PIP5K regulate distinct stages of Ca2+ signaling in mast cells.	PIP5K1B PIP5K1C	4.23e-06	2	72	2	19549683
Pubmed	A long-range interactive DNA methylation marker panel for the promoters of HOXA9 and HOXA10 predicts survival in breast cancer patients.	HOXA9 HOXA10	4.23e-06	2	72	2	28748001
Pubmed	Loss of expression of the Hoxa-9 homeobox gene impairs the proliferation and repopulating ability of hematopoietic stem cells.	HOXA9 HOXA10	4.23e-06	2	72	2	16091451
Pubmed	Transcriptional induction of the mouse metallothionein-I gene in hydrogen peroxide-treated Hepa cells involves a composite major late transcription factor/antioxidant response element and metal response promoter elements.	HOXD9 HOXD10	4.23e-06	2	72	2	7800494
Pubmed	Specific and redundant functions of the paralogous Hoxa-9 and Hoxd-9 genes in forelimb and axial skeleton patterning.	HOXA9 HOXD9	4.23e-06	2	72	2	8625797
Pubmed	Expression of AbdB-type homeobox genes in human tumors.	HOXC9 HOXD10	4.23e-06	2	72	2	7967520
Pubmed	Cryptorchidism and homeotic transformations of spinal nerves and vertebrae in Hoxa-10 mutant mice.	HOXA9 HOXA10	4.23e-06	2	72	2	7667266
Pubmed	Two gene members of the murine HOX-5 complex show regional and cell-type specific expression in developing limbs and gonads.	HOXD9 HOXD10	4.23e-06	2	72	2	2569970
Pubmed	Phosphatidylinositol 4-phosphate 5-kinase β regulates growth cone morphology and semaphorin 3A-triggered growth cone collapse in mouse dorsal root ganglion neurons.	PIKFYVE PIP5K1B	4.23e-06	2	72	2	23680464
Pubmed	Comparison of mouse and human HOX-4 complexes defines conserved sequences involved in the regulation of Hox-4.4.	HOXD9 HOXD10	4.23e-06	2	72	2	1348690
Pubmed	Identification of a Hoxd10-regulated transcriptional network and combinatorial interactions with Hoxa10 during spinal cord development.	HOXA10 HOXD9 HOXD10	4.67e-06	16	72	3	14743444
Pubmed	Nipbl and mediator cooperatively regulate gene expression to control limb development.	HOXC9 HOXD9 HOXD10	4.67e-06	16	72	3	25255084
Pubmed	Hoxc10 and Hoxd10 regulate mouse columnar, divisional and motor pool identity of lumbar motoneurons.	HOXA10 HOXD9 HOXD10	5.67e-06	17	72	3	18065432
Pubmed	Growth disturbance in fetal liver hematopoiesis of Mll-mutant mice.	HOXA9 HOXA10 HOXC9	6.79e-06	18	72	3	9639506
Pubmed	Misexpression of Pknox2 in mouse limb bud mesenchyme perturbs zeugopod development and deltoid crest formation.	HOXA10 HOXD9 HOXD10	6.79e-06	18	72	3	23717575
Pubmed	Expression of homeobox genes, including an insulin promoting factor, in the murine yolk sac at the time of hematopoietic initiation.	HOXA9 HOXA10 HOXC9	6.79e-06	18	72	3	9291463
Pubmed	Comprehensive Landscape of HOXA2, HOXA9, and HOXA10 as Potential Biomarkers for Predicting Progression and Prognosis in Prostate Cancer.	HOXA9 HOXA10	1.27e-05	3	72	2	35372588
Pubmed	The paralogous Hox genes Hoxa10 and Hoxd10 interact to pattern the mouse hindlimb peripheral nervous system and skeleton.	HOXA10 HOXD10	1.27e-05	3	72	2	11180954
Pubmed	The expression pattern of the murine Hoxa-10 gene and the sequence recognition of its homeodomain reveal specific properties of Abdominal B-like genes.	HOXA9 HOXA10	1.27e-05	3	72	2	7862151
Pubmed	The Abd-B-like Hox homeodomain proteins can be subdivided by the ability to form complexes with Pbx1a on a novel DNA target.	HOXA10 HOXB9	1.27e-05	3	72	2	9079637
Pubmed	Iloprost- and isoproterenol-induced increases in cAMP are regulated by different phosphodiesterases in erythrocytes of both rabbits and humans.	PDE2A PDE3A	1.27e-05	3	72	2	19252089
Pubmed	Differential regulation of endothelial cell permeability by cGMP via phosphodiesterases 2 and 3.	PDE2A PDE3A	1.27e-05	3	72	2	17704206
Pubmed	Dinucleotide repeats in the mouse Hox-4.4 and Hox-4.5 genes on chromosome 2, and their analysis in the BXD and BXH recombinant inbred strains.	HOXD9 HOXD10	1.27e-05	3	72	2	8094302
Pubmed	Structure of the 55-kDa regulatory subunit of protein phosphatase 2A: evidence for a neuronal-specific isoform.	PPP2R2A PPP2R3A	1.27e-05	3	72	2	1849734
Pubmed	Calpain7 impairs embryo implantation by downregulating β3-integrin expression via degradation of HOXA10.	HOXA10 CAPN7	1.27e-05	3	72	2	29459744
Pubmed	Activation of type I phosphatidylinositol 4-phosphate 5-kinase isoforms by the Rho GTPases, RhoA, Rac1, and Cdc42.	PIP5K1B PIP5K1C	1.27e-05	3	72	2	14681219
Pubmed	Functional cooperation between the non-paralogous genes Hoxa-10 and Hoxd-11 in the developing forelimb and axial skeleton.	HOXA10 HOXD10	1.27e-05	3	72	2	8625796
Pubmed	Setbp1 promotes the self-renewal of murine myeloid progenitors via activation of Hoxa9 and Hoxa10.	HOXA9 HOXA10	1.27e-05	3	72	2	22566606
Pubmed	Sexually dimorphic sterility phenotypes in Hoxa10-deficient mice.	HOXA9 HOXA10	1.27e-05	3	72	2	7700356
Pubmed	Structural basis for homeodomain recognition by the cell-cycle regulator Geminin.	HOXC9 HOXD10	1.27e-05	3	72	2	22615398
Pubmed	PIP5KIβ selectively modulates apical endocytosis in polarized renal epithelial cells.	PIP5K1B PIP5K1C	1.27e-05	3	72	2	23342003
Pubmed	Targeted disruption of Hoxd9 and Hoxd10 alters locomotor behavior, vertebral identity, and peripheral nervous system development.	HOXD9 HOXD10	1.27e-05	3	72	2	10642795
Pubmed	Phosphatidylinositol-4-phosphate 5-kinase isoforms exhibit acyl chain selectivity for both substrate and lipid activator.	PIP5K1B PIP5K1C	1.27e-05	3	72	2	22942276
Pubmed	ARF6 stimulates clathrin/AP-2 recruitment to synaptic membranes by activating phosphatidylinositol phosphate kinase type Igamma.	SNAP91 PIP5K1C	1.27e-05	3	72	2	12847086
Pubmed	Gene expression signatures for HOXA4, HOXA9, and HOXD10 reveal alterations in transcriptional regulatory networks in colon cancer.	HOXA9 HOXD10	1.27e-05	3	72	2	30552679
Pubmed	Organization of human class I homeobox genes.	HOXB9 HOXC9 HOXD10	1.27e-05	22	72	3	2576652
Pubmed	An atlas of combinatorial transcriptional regulation in mouse and man.	HOXA9 HOXA10 HOXB9 PCGF2 HOXC9 HOXD9 HOXD10 SMARCA1 AATF TIMELESS	1.29e-05	877	72	10	20211142
Pubmed	Interactome Rewiring Following Pharmacological Targeting of BET Bromodomains.	MSH6 PCGF2 BRD2 NOM1 CSNK2A2 SMARCA1 AATF NDUFS2	1.46e-05	533	72	8	30554943
Pubmed	Deubiquitinating enzyme PSMD14 promotes tumor metastasis through stabilizing SNAIL in human esophageal squamous cell carcinoma.	MSH6 EEF1D PPP2R2A RARS1 NOM1 AP3B2 PIP5K1B	1.48e-05	383	72	7	29331416
Pubmed	Systematic bromodomain protein screens identify homologous recombination and R-loop suppression pathways involved in genome integrity.	HOXA9 HOXA10 MSH6 PPP2R2A BRD2 CSNK2A2 SMARCA1 ABHD8 SIPA1L2 SORL1 SOS1	1.78e-05	1116	72	11	31753913
Pubmed	Murine genes related to the Drosophila AbdB homeotic genes are sequentially expressed during development of the posterior part of the body.	HOXD9 HOXD10	2.53e-05	4	72	2	1676674
Pubmed	Loss of PIP5KIgamma, unlike other PIP5KI isoforms, impairs the integrity of the membrane cytoskeleton in murine megakaryocytes.	PIP5K1B PIP5K1C	2.53e-05	4	72	2	18188447
Pubmed	Type I phosphatidylinositol-4-phosphate 5-kinases. Cloning of the third isoform and deletion/substitution analysis of members of this novel lipid kinase family.	PIP5K1B PIP5K1C	2.53e-05	4	72	2	9535851
Pubmed	Down-regulation of homeobox genes MEIS1 and HOXA in MLL-rearranged acute leukemia impairs engraftment and reduces proliferation.	HOXA9 HOXA10	2.53e-05	4	72	2	21518888
Pubmed	Respecification of vertebral identities by retinoic acid.	HOXA10 HOXD10	2.53e-05	4	72	2	1358593
Pubmed	Evidence that Hoxa expression domains are evolutionarily transposed in spinal ganglia, and are established by forward spreading in paraxial mesoderm.	HOXA9 HOXA10	2.53e-05	4	72	2	10354475
Pubmed	HOX4 genes encode transcription factors with potential auto- and cross-regulatory capacities.	HOXD9 HOXD10	2.53e-05	4	72	2	1756725
Pubmed	The Mll partial tandem duplication: differential, tissue-specific activity in the presence or absence of the wild-type allele.	HOXA9 HOXA10	2.53e-05	4	72	2	18617636
Pubmed	MGMT-independent temozolomide resistance in pediatric glioblastoma cells associated with a PI3-kinase-mediated HOX/stem cell gene signature.	HOXA9 HOXA10	2.53e-05	4	72	2	20935218
Pubmed	Structure of protein phosphatase 2A core enzyme bound to tumor-inducing toxins.	PPP2R2A PPP2R3A	2.53e-05	4	72	2	17055435
Pubmed	Insertion of a targeting construct in a Hoxd-10 allele can influence the control of Hoxd-9 expression.	HOXD9 HOXD10	2.53e-05	4	72	2	7894075
Pubmed	The establishment of murine Hox-1 expression domains during patterning of the limb.	HOXA10 HOXD10	2.53e-05	4	72	2	8099045
Cytoband	Ensembl 112 genes in cytogenetic band chrXq26	RTL8B SMARCA1 RTL8A RTL8C	1.57e-04	171	72	4	chrXq26
Cytoband	12p12	PDE3A BORCS5	1.87e-04	13	72	2	12p12
Cytoband	16q13	ARL2BP CNGB1	1.48e-03	36	72	2	16q13
Cytoband	7p15.2	HOXA9 HOXA10	2.10e-03	43	72	2	7p15.2
GeneFamily	HOXL subclass homeoboxes	HOXA9 HOXA10 HOXB9 HOXC9 HOXD9 HOXD10	4.12e-09	52	47	6	518
GeneFamily	WD repeat domain containing\|Protein phosphatase 2 regulatory subunits	PPP2R2A PPP2R3A	6.80e-04	15	47	2	696
GeneFamily	Phosphodiesterases	PDE2A PDE3A	1.76e-03	24	47	2	681
CoexpressionAtlas	gudmap_RNAseq_p2_CD2APMEISWT_2500_K2	HOXA9 HOXA10 HOXB9 HOXC9 HOXD9 HOXD10	9.08e-07	99	70	6	gudmap_RNAseq_p2_CD2APMEISWT_2500_K2
CoexpressionAtlas	kidney_P3_CapMes_Crym_k-means-cluster#3_top-relative-expression-ranked_500	HOXA9 HOXA10 HOXB9 HOXC9 HOXD10 SNAP91	3.24e-06	123	70	6	gudmap_kidney_P3_CapMes_Crym_k3_500
CoexpressionAtlas	Progenitor-Cell-Biology-Consortium_EmbryoidBody_from_inducedPluripotentialStemCells_derived from_from_fibroblast_top-relative-expression-ranked_500	MEP1A HOXA9 HOXA10 HOXB9 C6orf118 HOXC9 HOXD9 HOXD10 SNAP91 SYT5	5.08e-06	497	70	10	PCBC_EB_fibroblast_500
CoexpressionAtlas	kidney_P4_CapMesRenVes_Crym_k-means-cluster#4_top-relative-expression-ranked_500	HOXA9 HOXA10 HOXB9 HOXC9 HOXD10	1.55e-05	95	70	5	gudmap_kidney_P4_CapMesRenVes_Crym_k4_500
CoexpressionAtlas	kidney_P4_CapMesRenVes_Crym_k-means-cluster#1_top-relative-expression-ranked_200	HOXA9 HOXB9 HOXC9 HOXD10	1.74e-05	47	70	4	gudmap_kidney_P4_CapMesRenVes_Crym_k1_200
CoexpressionAtlas	Progenitor-Cell-Biology-Consortium_EmbryoidBody_top-relative-expression-ranked_500	HOXA9 HOXA10 HOXB9 C6orf118 HOXC9 HOXD9 HOXD10 SNAP91 SYT5	3.54e-05	496	70	9	PCBC_EB_500
CoexpressionAtlas	kidney_P0_CapMes_Crym_k-means-cluster#2_top-relative-expression-ranked_500	HOXA9 HOXA10 HOXB9 HOXC9 HOXD10 SNAP91	4.34e-05	194	70	6	gudmap_kidney_P0_CapMes_Crym_k2_500
CoexpressionAtlas	kidney_P0_CapMes_Crym_top-relative-expression-ranked_500	HOXA9 HOXA10 HOXB9 HOXC9 HOXD10 SNAP91 DEPDC7	5.17e-05	294	70	7	gudmap_kidney_P0_CapMes_Crym_500
CoexpressionAtlas	kidney_P2_CapMes_Crym_k-means-cluster#3_top-relative-expression-ranked_500	HOXA9 HOXA10 HOXB9 HOXC9 HOXD10 SNAP91	5.44e-05	202	70	6	gudmap_kidney_P2_CapMes_Crym_k3_500
CoexpressionAtlas	gudmap_RNAseq_e11.5_Ureteric_tips_2500_K2	PDE2A HOXB9 HOXC9 HOXD9 HOXD10 SNAP91 SIPA1L2	6.38e-05	304	70	7	gudmap_RNAseq_e11.5_Ureteric_tips_2500_K2
CoexpressionAtlas	gudmap_RNAseq_e11.5_Ureteric_stalks_2500_K2	ESRP2 HOXA9 HOXA10 PDE2A HOXB9 HOXC9 HOXD9 HOXD10	9.94e-05	441	70	8	gudmap_RNAseq_e11.5_Ureteric_stalks_2500_K2
CoexpressionAtlas	kidney_P3_CapMes_Crym_k-means-cluster#1_top-relative-expression-ranked_1000	HOXA9 HOXA10 HOXB9 HOXC9 HOXD10 SNAP91	1.28e-04	236	70	6	gudmap_kidney_P3_CapMes_Crym_k1_1000
CoexpressionAtlas	ratio_EmbryoidBody_vs_StemCell_top-relative-expression-ranked_500_k-means-cluster#2	HOXA9 HOXA10 HOXD9 HOXD10	1.29e-04	78	70	4	ratio_EB_vs_SC_500_K2
CoexpressionAtlas	kidney_P2_CapMes_Crym_top-relative-expression-ranked_100	HOXA9 HOXC9 HOXD10 SNAP91	1.71e-04	84	70	4	gudmap_kidney_P2_CapMes_Crym_100
CoexpressionAtlas	kidney_P3_CapMes_Crym_k-means-cluster#2_top-relative-expression-ranked_100	HOXC9 HOXD10 SNAP91	1.74e-04	33	70	3	gudmap_kidney_P3_CapMes_Crym_k2_100
CoexpressionAtlas	Progenitor-Cell-Biology-Consortium_EmbryoidBody_fromBlastocyst-derived-humanEmbryonicStemCells_top-relative-expression-ranked_500	MEP1A HOXA9 HOXA10 HOXB9 C6orf118 HOXC9 HOXD9 HOXD10	2.22e-04	496	70	8	PCBC_EB_blastocyst_500
CoexpressionAtlas	kidney_P1_CapMes_Crym_top-relative-expression-ranked_500	HOXA9 HOXB9 HOXC9 HOXD10 SNAP91 DEPDC7	2.98e-04	276	70	6	gudmap_kidney_P1_CapMes_Crym_500
CoexpressionAtlas	kidney_P2_CapMes_Crym_k-means-cluster#3_top-relative-expression-ranked_200	HOXA9 HOXC9 HOXD10 SNAP91	3.10e-04	98	70	4	gudmap_kidney_P2_CapMes_Crym_k3_200
CoexpressionAtlas	DevelopingKidney_e15.5_Proximal Tubules_emap-28005_k-means-cluster#1_top-relative-expression-ranked_1000	ESRP2 SAMD9L DEPDC7 SORL1	3.35e-04	100	70	4	gudmap_developingKidney_e15.5_Proximal Tubules_1000_k1
CoexpressionAtlas	Progenitor-Cell-Biology-Consortium_EmbryoidBody_from_inducedPluripotentialStemCells_derived from_from_fibroblast_top-relative-expression-ranked_1000	MEP1A HOXA9 HOXA10 HOXB9 C6orf118 HOXC9 HOXD9 HOXD10 SNAP91 SYT5 SOAT2	3.59e-04	986	70	11	PCBC_EB_fibroblast_1000
CoexpressionAtlas	Progenitor-Cell-Biology-Consortium_EmbryoidBody_fromBlastocyst-derived-humanEmbryonicStemCells_top-relative-expression-ranked_1000	MEP1A HOXA9 HOXA10 HOXB9 C6orf118 HOXC9 HOXD9 HOXD10 SNAP91 SYT5 SOAT2	3.78e-04	992	70	11	PCBC_EB_blastocyst_1000
CoexpressionAtlas	kidney_P1_CapMes_Crym_k-means-cluster#4_top-relative-expression-ranked_100	HOXC9 HOXD10 SNAP91	3.85e-04	43	70	3	gudmap_kidney_P1_CapMes_Crym_k4_100
CoexpressionAtlas	kidney_P2_CapMes_Crym_top-relative-expression-ranked_500	HOXA9 HOXA10 HOXB9 HOXC9 HOXD10 SNAP91	3.95e-04	291	70	6	gudmap_kidney_P2_CapMes_Crym_500
CoexpressionAtlas	kidney_P1_CapMes_Crym_k-means-cluster#4_top-relative-expression-ranked_500	HOXA9 HOXB9 HOXC9 HOXD10 SNAP91	4.74e-04	196	70	5	gudmap_kidney_P1_CapMes_Crym_k4_500
CoexpressionAtlas	DevelopingKidney_e13.5_podocyte cells_emap-27773_k-means-cluster#4_top-relative-expression-ranked_1000	EEF1D C6orf118 MAMDC2 TIMELESS EIF4G3 SIPA1L2	5.62e-04	311	70	6	gudmap_developingKidney_e13.5_podocyte cells_1000_k4
CoexpressionAtlas	kidney_e13.5_Podocyte_MafB_k-means-cluster#3_top-relative-expression-ranked_1000	HOXA9 HOXA10 MSH6 HOXC9 HOXD10	6.07e-04	207	70	5	gudmap_kidney_e13.5_Podocyte_MafB_k3_1000
CoexpressionAtlas	kidney_P1_CapMes_Crym_top-relative-expression-ranked_200	HOXA9 HOXC9 HOXD10 SNAP91	6.67e-04	120	70	4	gudmap_kidney_P1_CapMes_Crym_200
CoexpressionAtlas	kidney_e15.5_Podocyte_MafB_k-means-cluster#1_top-relative-expression-ranked_200	SAMD9L RTL8A	6.92e-04	12	70	2	gudmap_kidney_e15.5_Podocyte_MafB_k1_200
CoexpressionAtlas	kidney_P0_JuxtaGlom_Ren1_top-relative-expression-ranked_1000	MEP1A PDE3A SAMD9L HOXD10 SMARCA1 PIP5K1B RTL8A SIM2 TNS1 SORL1	7.33e-04	905	70	10	gudmap_kidney_P0_JuxtaGlom_Ren1_1000
ToppCell	5'-GW_trimst-1.5-LargeIntestine-Mesenchymal-fibroblastic-Stromal_2_(NPY+)\|GW_trimst-1.5 / Celltypes from developing, pediatric, Crohn's, & adult GI tract	HOXA9 HOXA10 C6orf118 HOXD10 CAPN7	7.37e-06	166	72	5	3b67064a5149e72f895344d938c64b8ff65247f5
ToppCell	TCGA-Breast-Solid_Tissue_Normal\|TCGA-Breast / Sample_Type by Project: Shred V9	PDE2A MICU3 MAMDC2 ABCB5 TNS1	9.27e-06	174	72	5	e2f240d60bffbe8e6d60f0bb405b231bd3c96875
ToppCell	TCGA-Breast-Solid_Tissue_Normal-Breast_normal_tissue-Breast_normal_tissue\|TCGA-Breast / Sample_Type by Project: Shred V9	PDE2A MICU3 MAMDC2 ABCB5 TNS1	9.27e-06	174	72	5	0f3ec0d0d4344e10c9b48adc9174123f6402dc51
ToppCell	TCGA-Breast-Solid_Tissue_Normal-Breast_normal_tissue\|TCGA-Breast / Sample_Type by Project: Shred V9	PDE2A MICU3 MAMDC2 ABCB5 TNS1	9.27e-06	174	72	5	1aadbf2642b6d1320ceabd92e6ff59e11f16c315
ToppCell	10x5'v1-week_12-13-Mesenchymal_myocytic\|week_12-13 / cell types per 3 fetal stages;per 3',per 5'	HOXA10 PCGF2 C6orf118 HOXC9 SMARCA1	1.21e-05	184	72	5	437bc6c983849c1c3ff85f0dee091cf7010a4665
ToppCell	10x5'v1-week_12-13-Mesenchymal_myocytic-stroma\|week_12-13 / cell types per 3 fetal stages;per 3',per 5'	HOXA10 PCGF2 C6orf118 HOXC9 SMARCA1	1.21e-05	184	72	5	d1d5dd1701dff4eedf1cebbb9f4cd603aa0009c1
ToppCell	wk_08-11-Epithelial-PNS-KCNIP4+_neuron\|wk_08-11 / Celltypes from embryonic and fetal-stage human lung	PDE2A SNAP91 AP3B2 SYT5 CNGB1	1.49e-05	192	72	5	53642c88891f4e4e14b1740c5ced759b7d8b3572
ToppCell	3'-GW_trimst-2-LargeIntestine\|GW_trimst-2 / Celltypes from developing, pediatric, Crohn's, & adult GI tract	HOXA9 HOXA10 HOXB9 BRD2 HOXD10	1.65e-05	196	72	5	27a216af92100224818c91e298428bee25ab0af8
ToppCell	3'-GW_trimst-1-LargeIntestine-Mesenchymal-immature_mesenchymal_cell-Mesoderm_2_(ZEB2+)\|GW_trimst-1 / Celltypes from developing, pediatric, Crohn's, & adult GI tract	HOXA9 HOXA10 HOXD9 HOXD10 SIPA1L2	1.69e-05	197	72	5	ad6c200a193a15360d17463e18a465ce1b90b8da
ToppCell	3'-GW_trimst-1-LargeIntestine\|GW_trimst-1 / Celltypes from developing, pediatric, Crohn's, & adult GI tract	HOXA9 HOXA10 HOXC9 HOXD9 HOXD10	1.73e-05	198	72	5	ea6621a148a96c8ffa1a93a35c9e288545d2637a
ToppCell	5'-GW_trimst-1.5-LargeIntestine-Mesenchymal-immature_mesenchymal_cell-Mesoderm_2_(ZEB2+)\|GW_trimst-1.5 / Celltypes from developing, pediatric, Crohn's, & adult GI tract	HOXA9 HOXA10 HOXD9 HOXD10 SIPA1L2	1.77e-05	199	72	5	a95aa72387c9558e0316898eaa9df4de8932af1b
ToppCell	Tracheal-NucSeq-Immune_Lymphocytic-NK-ILC-T_NK-ILC\|NucSeq / Cell types per location group and 10X technology with lineage, and cell group designations	HOXA9 SNAP91 ABCB5 MYO1F	3.77e-05	116	72	4	f7f0cd61723c94586504b656a8d4e098e98d8e23
ToppCell	10x_3'_v3-thymus_(10x_3'_v3)-lymphocytic-innate_lymphocytic-immature_natural_killer_cell\|thymus_(10x_3'_v3) / Per Platform+tissue_group, by lineage_subgroup, cell_group, cell_type	HOXA9 HOXA10 SNAP91 ABCB5	9.22e-05	146	72	4	40fac8a298152ec7f7eeeed5a2d28541aea3b338
ToppCell	3'-GW_trimst-1.5-LargeIntestine-Mesenchymal-immature_mesenchymal_cell-Mesoderm_1_(HAND1+)\|GW_trimst-1.5 / Celltypes from developing, pediatric, Crohn's, & adult GI tract	HOXA9 HOXA10 PCDHGA1 ABCB5	9.22e-05	146	72	4	40784fd7ef856f64edfb5a054c0c5d95c8150b20
ToppCell	TCGA-Stomach-Primary_Tumor-Stomach_Adenocarcinoma-Stomach_Adenocarcinoma_-_NOS-5\|TCGA-Stomach / Sample_Type by Project: Shred V9	HOXD9 HOXD10 SOAT2 CHST13	1.28e-04	159	72	4	c40fe552da3abdb1df87e9e1647468dc038bec0a
ToppCell	Thalamus-Neuronal-Excitatory-eN2(Slc17a7_Slc17a6)-Slc17a7\|Thalamus / BrainAtlas - Mouse McCarroll V32	BRD2 UMODL1 RTL8B RTL8A	1.31e-04	160	72	4	7d34159363d274019e14549d1186c629ce990691
ToppCell	CV-Mild-4\|CV / Virus stimulation, Condition and Cluster	HOXA9 RTL8B PIP5K1B SIPA1L2	1.31e-04	160	72	4	be89efeeecb0de96ce136a7a62738f15dc0badb2
ToppCell	Thalamus-Neuronal-Excitatory-eN2(Slc17a7_Slc17a6)-Slc17a7-Tac2\|Thalamus / BrainAtlas - Mouse McCarroll V32	BRD2 UMODL1 RTL8B RTL8A	1.31e-04	160	72	4	fe5fb0e7a79862f63529721f0a82f4f6d231d3ca
ToppCell	droplet-Lung-nan-3m-Myeloid-myeloid_dendritic_cell\|Lung / Lung_Trachea - method, tissue, subtissue, age, lineage, cell ontology and free annotation	PHKG1 RTL8B DOCK10 TIMELESS	1.44e-04	164	72	4	a67dd181eba275c191f4d0cab13df30eaa3ad913
ToppCell	remission-HSPC\|World / disease stage, cell group and cell class	HOXA9 HOXA10 PIP5K1B CHST13	1.51e-04	166	72	4	d269ee6f7adb55b05dcb5eaea96629ccb0b2d6e3
ToppCell	renal_medulla_nuclei-Adult_normal_reference-Mesenchymal-glomerular_mesenchymal_cell\|Adult_normal_reference / Celltypes from Cells and Nuclei per compartment and clinical group	PDE3A ABCB5 DOCK10 PIP5K1B	1.55e-04	167	72	4	b4ef07117d14da3d5fbced949e4dfcb01c392295
ToppCell	renal_medulla_nuclei-Adult_normal_reference-Mesenchymal-glomerular_mesenchymal_cell-Mesangial_Cell-mesangial_typical\|Adult_normal_reference / Celltypes from Cells and Nuclei per compartment and clinical group	PDE3A ABCB5 DOCK10 PIP5K1B	1.55e-04	167	72	4	94fc7df7ca55cd722a8dbd153201a29891217473
ToppCell	renal_medulla_nuclei-Adult_normal_reference-Mesenchymal-glomerular_mesenchymal_cell-Mesangial_Cell\|Adult_normal_reference / Celltypes from Cells and Nuclei per compartment and clinical group	PDE3A ABCB5 DOCK10 PIP5K1B	1.55e-04	167	72	4	eff3723fe60755272eca237459165e436e919ece
ToppCell	10x_3'_v3-spleen_(10x_3'_v3)-lymphocytic-innate_lymphocytic-innate_lymphoid_cell\|spleen_(10x_3'_v3) / Per Platform+tissue_group, by lineage_subgroup, cell_group, cell_type	HOXA9 HOXA10 SNAP91 ABCB5	1.66e-04	170	72	4	6c65ddb496030bb479ef346cc37a9d4dfa6b824f
ToppCell	COVID-19_Convalescent-Hematopoietic_SC\|COVID-19_Convalescent / Disease group, lineage and cell class	HOXA9 HOXA10 PIP5K1B CHST13	1.66e-04	170	72	4	8a73d5334eed1cd9fdcc3ebeae0bdf9f945c228a
ToppCell	3'-GW_trimst-1.5-LargeIntestine-Mesenchymal-fibroblastic-Stromal_1_(ADAMDEC1+)\|GW_trimst-1.5 / Celltypes from developing, pediatric, Crohn's, & adult GI tract	HOXA9 HOXA10 HOXD9 HOXD10	1.66e-04	170	72	4	b5b47fe42617a4c2ebb49c8ed55db3926213a75a
ToppCell	facs-Large_Intestine-Proximal-3m-Epithelial-Lgr5+_undifferentiated_cell_(Distal)\|Large_Intestine / Large_Intestine_Pancreas_Liver - method, tissue, subtissue, age, lineage, cell ontology and free annotation	HOXA10 PDE3A HOXC9 DEPDC7	1.66e-04	170	72	4	833b4f44ea1fa673dfc6b43ce45a79fe68ae3b05
ToppCell	remission-HSPC\|remission / disease stage, cell group and cell class	HOXA9 HOXA10 PIP5K1B CHST13	1.69e-04	171	72	4	41b424e58470a2fc25632aea50a37c7c5ea17645
ToppCell	facs-Mammary_Gland-Mammary_Gland-18m-Endothelial-endothelial_cell\|Mammary_Gland / Skin_Bladder_Kidney_Mammary_Gland - method, tissue, subtissue, age, lineage, cell ontology and free annotation	PDE2A HOXD9 HOXD10 RTL8A	1.77e-04	173	72	4	a2c1ef3f4d7e9f68fc77ee7c42a4727bdea5da94
ToppCell	facs-Mammary_Gland-Mammary_Gland-18m-Endothelial\|Mammary_Gland / Skin_Bladder_Kidney_Mammary_Gland - method, tissue, subtissue, age, lineage, cell ontology and free annotation	PDE2A HOXD9 HOXD10 RTL8A	1.77e-04	173	72	4	4830136f1f1976e00ac9af9062a531ac42533041
ToppCell	facs-Mammary_Gland-Mammary_Gland-18m-Endothelial-nan\|Mammary_Gland / Skin_Bladder_Kidney_Mammary_Gland - method, tissue, subtissue, age, lineage, cell ontology and free annotation	PDE2A HOXD9 HOXD10 RTL8A	1.77e-04	173	72	4	0b79e2a4fd19d524c24b69a6b524ffc6affdabe5
ToppCell	TCGA-Breast-Solid_Tissue_Normal-Breast_normal_tissue-Breast_normal_tissue-3\|TCGA-Breast / Sample_Type by Project: Shred V9	PDE2A MAMDC2 ABCB5 TNS1	1.81e-04	174	72	4	7f8f5fafae08676d2b90cab9802c3c9320f1370e
ToppCell	droplet-Lung-21m-Hematologic-lymphocytic-CD8-positive,_alpha-beta_T_cell-CD8-positive,_alpha-beta_T_cell_l21\|21m / method, tissue, age, lineage, sublineage, cell ontologies, cell type and subtype	MSH6 CSNK2A2 ABHD8 TTF1	1.89e-04	176	72	4	91ad2c34144f72283ca112fd3b3784f2f6259f65
ToppCell	droplet-Heart-nan-3m-Mesenchymal-smooth_muscle_cell\|Heart / Tongue_Heart_Limb_Muscle_Aorta_Diaphragm - method, tissue, subtissue, age, lineage, cell ontology and free annotation	PDE3A MAMDC2 PIP5K1B SYT5	1.93e-04	177	72	4	dbdbdc8ed9ef0b529694242ef9f9f07a42e16005
ToppCell	tumor_Lung-Endothelial_cells-EPCs\|tumor_Lung / Location, Cell class and cell subclass	HOXB9 HOXD9 HOXD10 RTL8B	1.93e-04	177	72	4	f8b152c09d56a97e8c0482fb1a3964c05f9dc8c5
ToppCell	Anterior_Cingulate_gyrus_(CgG)-Neuronal-Inh_GABAergic-i_Gaba_2-GABA_PAX6-Inh_L1_PAX6_CA4\|Anterior_Cingulate_gyrus_(CgG) / Sample groups (6 Anatomical region groups), with 5 level hierarchy of cell types	PDE3A HOXB9 ABCB5 DOCK10	1.98e-04	178	72	4	e86ed30652c2de70f16430f04b78789b87df4af2
ToppCell	droplet-Heart-nan-3m-Mesenchymal-smooth_muscle_cell\|Heart / Tongue_Heart_Limb_Muscle_Aorta_Diaphragm - method, tissue, subtissue, age, lineage, cell ontology and free annotation	PDE3A MAMDC2 PIP5K1B SYT5	1.98e-04	178	72	4	416f85e51f45ec7949451fd47611a84e33e87245
ToppCell	COVID-19-kidney-vSMC/Pericyte\|COVID-19 / Disease (COVID-19 only), tissue and cell type	PDE3A HOXD10 PIP5K1B TNS1	2.02e-04	179	72	4	111b1084f73306bdeffaaf240e7dbb4f5bf33de1
ToppCell	PCW_10-12-Endothelial-Endothelial_mature-lymphatic\|PCW_10-12 / Celltypes from embryonic and fetal-stage human lung	PDE2A HOXD9 HOXD10 FBXO39	2.02e-04	179	72	4	ab3d08b51cd7a37582305615ee221c7a2af83b40
ToppCell	PCW_10-12-Endothelial-Endothelial_mature-lymphatic-endo_lymphatic_(7)\|PCW_10-12 / Celltypes from embryonic and fetal-stage human lung	PDE2A HOXD9 HOXD10 FBXO39	2.02e-04	179	72	4	35fe9961e228ce255e3317fc244efa35b5adbf8b
ToppCell	PCW_13-14-Neuronal-Neuronal_postreplicative-neuro_neuronal_(6)\|PCW_13-14 / Celltypes from embryonic and fetal-stage human lung	PDE2A SNAP91 SYT5 CNGB1	2.02e-04	179	72	4	af0b54c9ea0b6e4210f22dbb6e88ecd3276a5f86
ToppCell	COVID-19-kidney-NK\|COVID-19 / Disease (COVID-19 only), tissue and cell type	XYLT1 MYO1F DOCK10 SORL1	2.11e-04	181	72	4	8906ee8a7a1616dfe8c3b5c73988416641213629
ToppCell	droplet-Limb_Muscle-Pre-Sort-18m-Lymphocytic-T_cell\|Limb_Muscle / Tongue_Heart_Limb_Muscle_Aorta_Diaphragm - method, tissue, subtissue, age, lineage, cell ontology and free annotation	PIKFYVE PHKG1 MYO1F SOAT2	2.11e-04	181	72	4	8a8061725e718c89a4c751a415120c5312acc757
ToppCell	cellseq2-Immune-Lymphocytic_T/NK-Lymphocytic_T/NK-NK\|cellseq2 / Celltype signatures by Technology, Lineage, Lineage_subclass, Celltype_group, Cell_type2	XYLT1 HOXA10 MYO1F TIMELESS	2.15e-04	182	72	4	8ccffcbae28c374fd4161fb0d4cf2c49fae557f6
ToppCell	facs-Lung-EPCAM-24m-Myeloid-Myeloid_Dendritic_Type_2\|Lung / Lung_Trachea - method, tissue, subtissue, age, lineage, cell ontology and free annotation	RTL8B MYO1F DOCK10 TIMELESS	2.20e-04	183	72	4	107cc756c45d6e92181659868d91188814dae66d
ToppCell	3'_v3-lymph-node_spleen-Hematopoietic_Erythro-Mega-Megakaryocyte_early\|lymph-node_spleen / Manually curated celltypes from each tissue	PDE2A PDE3A RTL8B ANO6	2.24e-04	184	72	4	10607d7d92edcbb92d992900086b90b307421cc3
ToppCell	renal_cortex_nuclei-Renal_AKI_(acute_kidney_injury)-Epithelial-Distal_tubule_epithelial_cell-kidney_loop_of_Henle_thick_ascending_limb_epithelial_cell-Macula_Densa_Cell\|Renal_AKI_(acute_kidney_injury) / Celltypes from Cells and Nuclei per compartment and clinical group	PDE3A SNAP91 PIP5K1B SIM2	2.24e-04	184	72	4	8fd8bd3d28d0ee6f0ef1f14e354d8eaf63a8081b
ToppCell	3'_v3-lymph-node_spleen-Lymphocytic_Invariant-Inducer-like-ILC3\|lymph-node_spleen / Manually curated celltypes from each tissue	HOXA9 HOXA10 SNAP91 ABCB5	2.24e-04	184	72	4	479e60f76c191253e23699c9dd7ef7efc08c59ad
ToppCell	Anterior_Cingulate_gyrus_(CgG)-Neuronal-Inh_GABAergic-i_Gaba_2-GABA_PAX6\|Anterior_Cingulate_gyrus_(CgG) / Sample groups (6 Anatomical region groups), with 5 level hierarchy of cell types	PDE3A HOXB9 ABCB5 DOCK10	2.29e-04	185	72	4	79cff4f3c6ae8e5ea60e8eae082b9275f2679ee9
ToppCell	facs-Lung-24m-Hematologic-myeloid-myeloid_dendritic_cell-dendritic_type_2\|24m / method, tissue, age, lineage, sublineage, cell ontologies, cell type and subtype	RTL8B MYO1F DOCK10 TIMELESS	2.29e-04	185	72	4	ed7b26bdebfd0df2b4f5020a855a052d94ae7219
ToppCell	(5)_Pericytes\|World / Cell class and subclass of bone marrow stroma cells in homeostatis	PDE3A DOCK10 PIP5K1B SYT5	2.34e-04	186	72	4	acbca8cc048d87faf859b3e77bdb38d0a3dad71c
ToppCell	(5)_Pericytes-(50)_Pericytes\|World / Cell class and subclass of bone marrow stroma cells in homeostatis	PDE3A DOCK10 PIP5K1B SYT5	2.34e-04	186	72	4	67b59defdd1ed3608229cc5e2a3b480d92312afa
ToppCell	10x5'v1-week_12-13-Mesenchymal_myocytic-stroma-muscle\|week_12-13 / cell types per 3 fetal stages;per 3',per 5'	HOXA10 PCGF2 C6orf118 SMARCA1	2.34e-04	186	72	4	fbc4ba4a7a8e5902a1b0add52ece0d6da85a8a5f
ToppCell	facs-Trachea-18m-Mesenchymal-fibroblast-fibroblast_of_trachea-\|18m / method, tissue, age, lineage, sublineage, cell ontologies, cell type and subtype	HOXA9 HOXA10 HOXB9 HOXC9	2.34e-04	186	72	4	bdc87e4631a8ea73e262e541aa84a28f24c94b00
ToppCell	10x_3'_v3-thymus_(10x_3'_v3)-lymphocytic-innate_lymphocytic-mature_NK_T_cell\|thymus_(10x_3'_v3) / Per Platform+tissue_group, by lineage_subgroup, cell_group, cell_type	HOXA9 HOXA10 SNAP91 MYO1F	2.34e-04	186	72	4	c984e5729958237b101df96d1c89a236faacded6
ToppCell	3'-GW_trimst-2-LargeIntestine-Mesenchymal-fibroblastic-Stromal_2_(NPY+)\|GW_trimst-2 / Celltypes from developing, pediatric, Crohn's, & adult GI tract	HOXA9 HOXA10 HOXD9 HOXD10	2.34e-04	186	72	4	8ea708070166c858cd9bd871670655b0114c32a5
ToppCell	renal_papilla_nuclei-Hypertensive_with+without-CKD-Epithelial-Intermediate_tubule_epithelial_cell-kidney_loop_of_Henle_thin_descending_limb_epithelial_cell-Degenerative_Descending_Thin_Limb_Cell_Type_3\|Hypertensive_with+without-CKD / Celltypes from Cells and Nuclei per compartment and clinical group	PDE3A PPP2R3A SIM2 TNS1	2.38e-04	187	72	4	c31130fc2f9f882944b2ba366a034a03f051c4b9
ToppCell	3'-GW_trimst-2-LargeIntestine-Mesenchymal-fibroblastic-Stromal_2_(CH25H+)\|GW_trimst-2 / Celltypes from developing, pediatric, Crohn's, & adult GI tract	HOXA9 HOXA10 HOXD9 HOXD10	2.38e-04	187	72	4	39756ab418267151d86f9c2553db859f71900bb1
ToppCell	(6)_ILC\|World / Spleen cell shreds - cell class (v1) and cell subclass (v1)	HOXA9 HOXA10 SNAP91 ABCB5	2.43e-04	188	72	4	de7cb273899d0e0748c85f45c6b5e7f0642ab057
ToppCell	droplet-Kidney-nan-3m-Epithelial-Epcam____podocyte-2\|Kidney / Skin_Bladder_Kidney_Mammary_Gland - method, tissue, subtissue, age, lineage, cell ontology and free annotation	HOXA10 HOXB9 SMARCA1 SIM2	2.43e-04	188	72	4	c300accbac71a3bc075fe985543d8a8ead82531b
ToppCell	(6)_ILC\|World / Spleen cell shreds - cell class (v1) and cell subclass (v1)	HOXA9 HOXA10 SNAP91 ABCB5	2.43e-04	188	72	4	f4734d5b703678670ece204a0519cf015e180a6e
ToppCell	Fetal_29-31_weeks-Endothelial-endothelial_cell_of_lymph_vessel-D062\|Fetal_29-31_weeks / Lineage, Cell type, age group and donor	PDE2A HOXD9 HOXD10 FBXO39	2.48e-04	189	72	4	0d18ea72bd58d32a8ab9a61cf97f5786642f804b
ToppCell	RV-06._Ventricular_Cardiomyocyte_II\|World / Chamber and Cluster_Paper	PDE3A PPP2R3A SNAP91 PIP5K1B	2.48e-04	189	72	4	5e80c47f63980904c4c1ff02c201b67b456a0974
ToppCell	BAL-Control-Lymphocyte-B-B_cell\|Control / Location, Disease Group, Cell group, Cell class and sub_cluster (2021.03.01)	PIKFYVE SYT5 PLSCR3 CNBD2	2.53e-04	190	72	4	da7341a8a423e5fe4d8e733d8e50c10a3318ac1c
ToppCell	BAL-Control-Lymphocyte-B-B_cell-B_cell\|Control / Location, Disease Group, Cell group, Cell class and sub_cluster (2021.03.01)	PIKFYVE SYT5 PLSCR3 CNBD2	2.53e-04	190	72	4	42312f7d79fe889397d32910b625793e2535cc26
ToppCell	BAL-Control-Lymphocyte-B-B_cell-B_cell-B_activate-7\|Control / Location, Disease Group, Cell group, Cell class and sub_cluster (2021.03.01)	PIKFYVE SYT5 PLSCR3 CNBD2	2.53e-04	190	72	4	682418a7a2096743112eae3790d40e7e600612c0
ToppCell	droplet-Mammary_Gland-nan-18m-Endothelial-endothelial_cell\|Mammary_Gland / Skin_Bladder_Kidney_Mammary_Gland - method, tissue, subtissue, age, lineage, cell ontology and free annotation	PDE2A HOXB9 HOXD9 HOXD10	2.64e-04	192	72	4	945153c41dde6e90d103206955e1707b54eb0665
ToppCell	5'-GW_trimst-2-LargeIntestine-Mesenchymal-immature_mesenchymal_cell-Mesoderm_2_(ZEB2+)\|GW_trimst-2 / Celltypes from developing, pediatric, Crohn's, & adult GI tract	HOXA9 HOXA10 HOXD10 RTL8C	2.64e-04	192	72	4	f053b89bfd6048c227667ff01c38df7c51d8a496
ToppCell	facs-Lung-Endomucin_-18m\|Lung / Lung_Trachea - method, tissue, subtissue, age, lineage, cell ontology and free annotation	PDE3A RTL8A PLSCR3 DAAM1	2.64e-04	192	72	4	ba3fe97786564dba1c8185f2802ce1b57f4f3cc9
ToppCell	facs-Marrow-KLS-3m-Hematologic-MPP_Fraction_B_+_C\|Marrow / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation	HOXA9 MSH6 EIF3B PLSCR3	2.64e-04	192	72	4	03dcd9405d3d76fc7455066ba5d83c09cd17072d
ToppCell	droplet-Mammary_Gland-nan-18m-Endothelial\|Mammary_Gland / Skin_Bladder_Kidney_Mammary_Gland - method, tissue, subtissue, age, lineage, cell ontology and free annotation	PDE2A HOXB9 HOXD9 HOXD10	2.64e-04	192	72	4	6ab50579c63f31ca2cd41063a99b129f11c07510
ToppCell	facs-Lung-Endomucin_\|Lung / Lung_Trachea - method, tissue, subtissue, age, lineage, cell ontology and free annotation	PDE3A RTL8A PLSCR3 DAAM1	2.64e-04	192	72	4	85d4d0df701451daf95e94a87a0096da1e86533b
ToppCell	3'-GW_trimst-1.5-LargeIntestine\|GW_trimst-1.5 / Celltypes from developing, pediatric, Crohn's, & adult GI tract	HOXA9 HOXA10 HOXD9 HOXD10	2.64e-04	192	72	4	9946f5d5cab64936ca68d9f4dc9ce6eba85b43ab
ToppCell	Children_(3_yrs)-Immune-monocyte-D046\|Children_(3_yrs) / Lineage, Cell type, age group and donor	XYLT1 MYO1F DOCK10 SORL1	2.69e-04	193	72	4	58e1930a1d80ad3729ab9604ac8ebf7308232a3d
ToppCell	facs-Lung-Endomucin_-18m-Endothelial-endothelial_cell_of_lung\|Lung / Lung_Trachea - method, tissue, subtissue, age, lineage, cell ontology and free annotation	PDE3A RTL8A PLSCR3 DAAM1	2.69e-04	193	72	4	2218833749576ba1a0fc95bd155c781e7e1163c6
ToppCell	Children_(3_yrs)-Immune-natural_killer_cell\|Children_(3_yrs) / Lineage, Cell type, age group and donor	XYLT1 MYO1F DOCK10 SORL1	2.69e-04	193	72	4	1cb666375bc4e1b11a146d20896c9b5ae6fd0887
ToppCell	LAM-LAM-LAM+\|LAM / Condition, Lineage and Cell class	HOXA9 HOXA10 HOXC9 ABCB5	2.74e-04	194	72	4	4ba73a9145ed44896e359f6df9c1f32bbe24a189
ToppCell	IPF-Endothelial-VE_Capillary_A\|Endothelial / Disease state, Lineage and Cell class	SAMD9L PIP5K1B DAAM1 SIPA1L2	2.74e-04	194	72	4	777ce41c3f22c591e2d81120f189b834e53ffb4b
ToppCell	facs-Lung-Endomucin_-18m-Endothelial\|Lung / Lung_Trachea - method, tissue, subtissue, age, lineage, cell ontology and free annotation	PDE3A RTL8A PLSCR3 DAAM1	2.74e-04	194	72	4	df56e23f1dcf1902d29392fcc947e0e268e1648b
ToppCell	LAM-LAM\|LAM / Condition, Lineage and Cell class	HOXA9 HOXA10 HOXC9 ABCB5	2.74e-04	194	72	4	4c6561a64711c72c4ef4a3e67c41d2e8d31fba57
ToppCell	10x_3'_v3-lymph_node_(10x_3'_v3)-lymphocytic-innate_lymphocytic\|lymph_node_(10x_3'_v3) / Per Platform+tissue_group, by lineage_subgroup, cell_group, cell_type	HOXA9 HOXA10 SNAP91 ABCB5	2.80e-04	195	72	4	63e132fd6e4318299dd47bbe8ed3bf120efe46dd
ToppCell	Tracheal-10x5prime-Immune_Myeloid-Macrophage_alveolar-Macro_alv_dividing\|10x5prime / Cell types per location group and 10X technology with lineage, and cell group designations	HOXA9 SAMD9L TIMELESS CHST13	2.80e-04	195	72	4	c96755d2eb98112b703b5dbee9c88730ace7dcbf
ToppCell	droplet-Mammary_Gland-nan-18m-Endothelial-endothelial_cell\|Mammary_Gland / Skin_Bladder_Kidney_Mammary_Gland - method, tissue, subtissue, age, lineage, cell ontology and free annotation	PDE2A HOXB9 HOXD9 HOXD10	2.80e-04	195	72	4	4db30b3bc65c25626f828cd4f867f20c71809898
ToppCell	10x_3'_v3-lymph_node_(10x_3'_v3)-lymphocytic-innate_lymphocytic-innate_lymphoid_cell\|lymph_node_(10x_3'_v3) / Per Platform+tissue_group, by lineage_subgroup, cell_group, cell_type	HOXA9 HOXA10 SNAP91 ABCB5	2.80e-04	195	72	4	d70b49f6b9c6c4422adb2936c837a1af7569fb0a
ToppCell	5'-GW_trimst-2-LargeIntestine\|GW_trimst-2 / Celltypes from developing, pediatric, Crohn's, & adult GI tract	HOXA9 HOXA10 HOXB9 HOXD10	2.80e-04	195	72	4	1a4a5623fa0318ef388cc228c7060e0586a7acf9
ToppCell	3'-GW_trimst-1-LargeIntestine-Mesenchymal-immature_mesenchymal_cell-Mesoderm_1_(HAND1+)\|GW_trimst-1 / Celltypes from developing, pediatric, Crohn's, & adult GI tract	HOXA9 HOXA10 HOXD9 HOXD10	2.85e-04	196	72	4	fd0a2b863dedaf08d18e7f67da18ac7e853991e4
ToppCell	3'-GW_trimst-2-LargeIntestine-Mesenchymal-fibroblastic-Stromal_1_(ADAMDEC1+)\|GW_trimst-2 / Celltypes from developing, pediatric, Crohn's, & adult GI tract	HOXA9 HOXA10 HOXD9 HOXD10	2.85e-04	196	72	4	a7adc0e0baef261d0937e4e8351321d41beca82f
ToppCell	5'-GW_trimst-2-LargeIntestine-Mesenchymal-immature_mesenchymal_cell\|GW_trimst-2 / Celltypes from developing, pediatric, Crohn's, & adult GI tract	HOXA9 HOXA10 HOXD10 RTL8C	2.85e-04	196	72	4	cbfe01ba8071864e19b37028236ae35789f630fe
ToppCell	5'-GW_trimst-1.5-LargeIntestine\|GW_trimst-1.5 / Celltypes from developing, pediatric, Crohn's, & adult GI tract	HOXA9 HOXA10 HOXD9 HOXD10	2.91e-04	197	72	4	0b2ad6a933ff1a325649cc8f139380fd158a1d42
ToppCell	5'-GW_trimst-2-SmallIntestine-Neuronal-neurons_B\|GW_trimst-2 / Celltypes from developing, pediatric, Crohn's, & adult GI tract	SNAP91 AP3B2 SYT5 CNGB1	2.91e-04	197	72	4	a1ae1aa797762a3768e14434c7e5cd19c595ecb3
ToppCell	5'-GW_trimst-1.5-LargeIntestine-Mesenchymal\|GW_trimst-1.5 / Celltypes from developing, pediatric, Crohn's, & adult GI tract	HOXA9 HOXA10 HOXD9 HOXD10	2.91e-04	197	72	4	5f6fce382f273e789ffbb75b63e9b4e87519918e
ToppCell	3'-GW_trimst-1-LargeIntestine-Mesenchymal\|GW_trimst-1 / Celltypes from developing, pediatric, Crohn's, & adult GI tract	HOXA9 HOXA10 HOXD9 HOXD10	2.91e-04	197	72	4	c7b33d64e5cba3a8fc6f2d6aa85ebc83893195de
ToppCell	Tracheal-10x3prime_v2-Immune_Lymphocytic-NK-ILC-T_NK-ILC\|10x3prime_v2 / Cell types per location group and 10X technology with lineage, and cell group designations	HOXA9 HOXA10 MYO1F DOCK10	2.91e-04	197	72	4	9791923feefbd78810242113ad2a08ce4c2bb4f2
ToppCell	COVID-19-COVID-19_Convalescent-Others-HSPC\|COVID-19_Convalescent / Disease, condition lineage and cell class	HOXA9 HOXA10 PIP5K1B CHST13	2.91e-04	197	72	4	c1033a1a8b8b5c8569130aa9405a6e8e65ef7bd0
ToppCell	3'-GW_trimst-1-LargeIntestine-Mesenchymal-immature_mesenchymal_cell\|GW_trimst-1 / Celltypes from developing, pediatric, Crohn's, & adult GI tract	HOXA9 HOXA10 HOXD9 HOXD10	2.91e-04	197	72	4	fc718a254bda4df2d62975d04393492fb75ab305
ToppCell	Parenchymal-10x3prime_v2-Immune_Lymphocytic-NK-ILC-T_NK-ILC\|10x3prime_v2 / Cell types per location group and 10X technology with lineage, and cell group designations	HOXA9 HOXA10 ABCB5 MYO1F	2.91e-04	197	72	4	cd9172af705f9589890252ab5e8b333ed754bea4
ToppCell	Parenchymal-NucSeq-Immune_Myeloid-Macrophage_alveolar\|NucSeq / Cell types per location group and 10X technology with lineage, and cell group designations	SAMD9L MYO1F DOCK10 SIPA1L2	2.96e-04	198	72	4	e125eb8aa57c172e5518874da1bd25998292f5e2
ToppCell	Tracheal-NucSeq-Epithelial-Epi_airway_ciliated-Deuterosomal\|NucSeq / Cell types per location group and 10X technology with lineage, and cell group designations	C6orf118 DNAH12 UMODL1 SYT5	2.96e-04	198	72	4	f31790442ef142f1c0c49bf3daf2d0efb193d2c9
ToppCell	Parenchymal-NucSeq-Immune_Myeloid-Macrophage_alveolar-Macro_alveolar\|NucSeq / Cell types per location group and 10X technology with lineage, and cell group designations	SAMD9L MYO1F DOCK10 SIPA1L2	2.96e-04	198	72	4	0baeb8e2c199ff10bb5c829c523546af3c9227c1
ToppCell	10x5'v1-week_12-13-Endothelial-stroma\|week_12-13 / cell types per 3 fetal stages;per 3',per 5'	PDE2A HOXD9 PCDHGA1 FBXO39	2.96e-04	198	72	4	122215d9288533ad03562cf777e846504863df9a
Disease	male infertility (implicated_via_orthology)	ARL2BP CSNK2A2	4.02e-04	13	68	2	DOID:12336 (implicated_via_orthology)
Disease	serum IgE measurement	PDE3A GRXCR2 SIPA1L2	4.41e-04	64	68	3	EFO_0004579
Disease	hemoglobin change measurement	PPP2R2A C6orf118	1.17e-03	22	68	2	EFO_0600027
Disease	FEV/FEC ratio	PDE3A MICU3 DNAH12 BORCS5 PCDHGA1 MYO1F VTA1 TNS1 SORL1	1.97e-03	1228	68	9	EFO_0004713
Disease	asthma, seasonal allergic rhinitis	SIM2 TNS1	2.48e-03	32	68	2	EFO_0003956, MONDO_0004979
Disease	shoulder impingement syndrome	C6orf118 SIPA1L2	3.13e-03	36	68	2	EFO_1001178
Disease	ovarian neoplasm	MSH6 HOXB9 HOXD9	3.70e-03	134	68	3	C0919267
Disease	Malignant neoplasm of ovary	MSH6 HOXB9 HOXD9	3.94e-03	137	68	3	C1140680
Disease	erectile dysfunction	XYLT1 AATF	4.25e-03	42	68	2	EFO_0004234

Protein segments in the cluster

Peptide	Gene	Start	Entry
SSQEYRDFLELFFRM	UMODL1	811	Q5DID0
MYRDDLERFKEFKAQ	TTF1	516	Q15361
FRVNLFTDFDKYMTI	EIF3B	261	P55884
SYNNFFRMFDRNTKR	PPP2R2A	361	P63151
NFFRYFLRLSDDKME	FTHL17	51	Q9BXU8
RAAREANAYDFIMEF	ABCB5	496	Q2M3G0
LNEKAFSYRQMAFDF	SNAP91	131	O60641
FSYRQMAFDFARVKK	SNAP91	136	O60641
DFQNREEFRRLLYFM	DEPDC7	351	Q96QD5
TDFLAFKEMFLDYRA	ARL2BP	116	Q9Y2Y0
FKYDDAERRFYEQMN	EEF1D	16	P29692
TFYALAEDMRAIFKR	ABHD8	226	Q96I13
LREFQTYIRSMDKDF	AP3B2	411	Q13367
NLYMRFEDESFDRLL	MAMDC2	101	Q7Z304
FEKNRMNDFYIVDRD	ANO6	186	Q4KMQ2
ELEKEFLFNMYLTRD	HOXC9	206	P31274
FSMLANRFKESYRAL	GRXCR2	216	A6NFK2
LGATFLIDYMFFEKR	PLSCR3	271	Q9NRY6
FDHFSRKDYQRMLDL	PDE2A	746	O00408
YRLFEDMGLFEAFKI	PDE3A	716	Q14432
SFYADRFLKFMNSRV	PIP5K1B	381	O14986
NFFFERIMKYERLAR	FBXO39	286	Q8N4B4
LEKEFLFNMYLTRDR	HOXA9	221	P31269
ESKRQMSYFLDVFLF	DNAH12	551	Q6ZR08
EKEFLFNMYLTRDRR	HOXD9	301	P28356
GKAELNFEDFYRFMD	MICU3	351	Q86XE3
LEKEFLFNMYLTRER	HOXA10	351	P31260
DVSLKDCMRRLFYNF	MSH6	1026	P52701
RMAHIFYDTFFNLEK	PPP2R3A	1046	Q06190
MDDIYQFSKNFSLRL	NDUFS2	241	O75306
EKEFLFNMYLTRDRR	HOXB9	201	P17482
LFKDEMKRRRDFYAA	PCGF2	86	P35227
FFDSMRNEYFFDRNR	KCNA10	121	Q16322
KADRFLFEMSRINHY	DAAM1	756	Q9Y4D1
LYRTRFCEAMDKYFL	PIKFYVE	2071	Q9Y2I7
TEASALLYFFMRKNF	DOCK10	1581	Q96BY6
TFSKDNSFRMLYQRF	CAPN7	416	Q9Y6W3
LEKEFLFNMYLTRER	HOXD10	281	P28358
ETLFSFMQERQKRYA	BORCS5	126	Q969J3
SADRYRMFLRFQKEV	C6orf118	211	Q5T5N4
DFDIRFYMYELLKAL	CSNK2A2	131	P19784
KKQYDREFLLDFQFM	EIF4G3	621	O43432
ALRSFDYEQFRDMQL	PCDHGA1	516	Q9Y5H4
FLVFDLMKRGELFDY	PHKG1	101	Q16816
LNDYRGFLAEMKRVF	RTL8A	91	Q9BWD3
LSDYRGFLAEMKRVF	RTL8B	91	Q17RB0
LNDYRGFLAEMKRVF	RTL8C	91	A6ZKI3
LVMAVYDFDRFSRND	SYT5	191	O00445
NRLNDYIFSFDKMLD	RARS1	511	P54136
EVRDFQLRDKYMFAT	SORL1	296	Q92673
RNFRMDIEQSLYKFE	SMARCA1	716	P28370
SDFYRRMQNSDFLRE	PIH1D1	126	Q9NWS0
QSDLKRCFDFFIDYM	SAMD9L	1261	Q8IVG5
YAERFFKFMSNTVFR	PIP5K1C	431	O60331
LYAFEMFRLKSCVDF	MEP1A	96	Q16819
KNLERYMCSRFFIDF	TENT5D	256	Q8NEK8
LQEYEIERSFFLRMK	SIM2	151	Q14190
RIMQSDDYFARKFKA	SIPA1L2	26	Q9P2F8
ASKFCEYERRFQMTF	NOM1	711	Q5C9Z4
RKNLVLPDMFFSFYD	ESRP2	146	Q9H6T0
FYDFERDAYLLQRME	SOS1	701	Q07889
MKYRDAFAYVQERRF	STYX	141	Q8WUJ0
FAEMLRFGDRMFYRD	SOAT2	366	O75908
FMAKRFADFTVYRNR	AATF	351	Q9NY61
VAMARKLQDVFEFRY	BRD2	436	P25440
AQYRFEFFRKMELFA	CNBD2	231	Q96M20
QRRLFDLYKMDFLLF	CHST13	316	Q8NET6
CLKYMAFFEFNSRLE	CNGB1	766	Q14028
MEYRELFLALFRKFD	TIMELESS	476	Q9UNS1
VAFLSRYRDMNFLKS	XYLT1	436	Q86Y38
KMFLYADNEDRAGRF	VTA1	96	Q9NP79
SADQALDRFAMKRFY	TNS1	136	Q9HBL0
DAIAANLRKRFMDDY	MYO1F	31	O00160