Cluster composition

Functions

CategoryNameIntersectionWithQueryPValueGenesInTermGenesInQueryGenesInTermInQueryID
GeneOntologyMolecularFunctionRNA cap binding

FMR1 LARP1 LARP1B

2.27e-0521533GO:0000339
GeneOntologyMolecularFunctionmRNA binding

RBMXL2 ILF3 FMR1 RPS2 LARP1 ALYREF SRRM3 MBD2 CHTOP

7.91e-05694539GO:0003729
GeneOntologyMolecularFunctionhistone H3K4 monomethyltransferase activity

KMT2D KMT2B

1.92e-048532GO:0140945
GeneOntologyMolecularFunctionhistone H3K4 trimethyltransferase activity

KMT2D KMT2B

3.07e-0410532GO:0140999
GeneOntologyMolecularFunctionsiRNA binding

FMR1 MBD2

4.49e-0412532GO:0035197
GeneOntologyMolecularFunctionRNA 7-methylguanosine cap binding

FMR1 LARP1

6.16e-0414532GO:0000340
GeneOntologyMolecularFunctionmolecular adaptor activity

KMT2D SRSF2 FMR1 MAP1A DEDD2 FGF2 GIGYF2 ALYREF MBD2 THRAP3 TP53BP1

7.33e-0413565311GO:0060090
GeneOntologyMolecularFunctionhistone H3K4 methyltransferase activity

KMT2D KMT2B

1.27e-0320532GO:0042800
GeneOntologyMolecularFunctionprotein-RNA adaptor activity

FMR1 ALYREF

1.84e-0324532GO:0140517
GeneOntologyMolecularFunctionmRNA 5'-UTR binding

FMR1 LARP1

1.99e-0325532GO:0048027
GeneOntologyMolecularFunctionribonucleoprotein complex binding

HABP4 FMR1 LARP1 SNRPD1

2.17e-03206534GO:0043021
GeneOntologyMolecularFunctionmethyl-CpG binding

MBD2 CHTOP

3.06e-0331532GO:0008327
GeneOntologyMolecularFunctionprotein-macromolecule adaptor activity

KMT2D SRSF2 FMR1 MAP1A DEDD2 FGF2 ALYREF THRAP3 TP53BP1

3.20e-031160539GO:0030674
GeneOntologyBiologicalProcessmRNA metabolic process

HABP4 RBMXL2 SRSF2 FMR1 WDR33 LARP1 GIGYF2 ALYREF SCAF11 LARP1B SNRPD1 THRAP3

1.12e-069174912GO:0016071
GeneOntologyBiologicalProcessmRNA processing

HABP4 RBMXL2 SRSF2 FMR1 WDR33 ALYREF SCAF11 SNRPD1 THRAP3

5.14e-06551499GO:0006397
GeneOntologyBiologicalProcessRNA splicing

HABP4 RBMXL2 SRSF2 FMR1 ALYREF SCAF11 SNRPD1 THRAP3

2.18e-05502498GO:0008380
GeneOntologyBiologicalProcessnegative regulation of translational initiation

FMR1 LARP1 GIGYF2

2.46e-0524493GO:0045947
GeneOntologyBiologicalProcessregulation of translational initiation

HABP4 FMR1 LARP1 GIGYF2

6.45e-0591494GO:0006446
GeneOntologyBiologicalProcessRNA catabolic process

FMR1 ZC3H4 DEDD2 LARP1 GIGYF2 LARP1B THRAP3

6.77e-05432497GO:0006401
GeneOntologyBiologicalProcessregulation of mRNA metabolic process

RBMXL2 SRSF2 FMR1 LARP1 GIGYF2 LARP1B THRAP3

7.92e-05443497GO:1903311
GeneOntologyBiologicalProcessstress granule assembly

FMR1 UBAP2L PRRC2C

8.51e-0536493GO:0034063
GeneOntologyBiologicalProcessnucleic acid catabolic process

FMR1 ZC3H4 DEDD2 LARP1 GIGYF2 LARP1B THRAP3

1.06e-04464497GO:0141188
GeneOntologyBiologicalProcessregulation of RNA splicing

HABP4 RBMXL2 SRSF2 FMR1 THRAP3

1.29e-04207495GO:0043484
GeneOntologyBiologicalProcessmRNA splicing, via spliceosome

RBMXL2 SRSF2 FMR1 SCAF11 SNRPD1 THRAP3

1.95e-04358496GO:0000398
GeneOntologyBiologicalProcessRNA splicing, via transesterification reactions with bulged adenosine as nucleophile

RBMXL2 SRSF2 FMR1 SCAF11 SNRPD1 THRAP3

1.95e-04358496GO:0000377
GeneOntologyBiologicalProcessRNA splicing, via transesterification reactions

RBMXL2 SRSF2 FMR1 SCAF11 SNRPD1 THRAP3

2.07e-04362496GO:0000375
GeneOntologyBiologicalProcessnegative regulation of translation

HABP4 ILF3 FMR1 LARP1 GIGYF2

2.11e-04230495GO:0017148
GeneOntologyBiologicalProcessmethylation

PRDM10 KMT2D ILF3 KMT2B SNRPD1

2.29e-04234495GO:0032259
GeneOntologyBiologicalProcessregulation of mRNA splicing, via spliceosome

RBMXL2 SRSF2 FMR1 THRAP3

2.49e-04129494GO:0048024
GeneOntologyBiologicalProcesstranslational initiation

HABP4 FMR1 LARP1 GIGYF2

2.72e-04132494GO:0006413
GeneOntologyBiologicalProcessregulation of alternative mRNA splicing, via spliceosome

SRSF2 FMR1 THRAP3

3.73e-0459493GO:0000381
GeneOntologyBiologicalProcesspositive regulation of RNA splicing

HABP4 RBMXL2 THRAP3

4.53e-0463493GO:0033120
GeneOntologyBiologicalProcesspositive regulation of translation

HABP4 FMR1 LARP1 LARP1B

4.53e-04151494GO:0045727
GeneOntologyBiologicalProcessregulation of mRNA processing

RBMXL2 SRSF2 FMR1 THRAP3

5.37e-04158494GO:0050684
GeneOntologyBiologicalProcessregulation of mRNA stability

FMR1 LARP1 GIGYF2 LARP1B THRAP3

6.29e-04292495GO:0043488
GeneOntologyBiologicalProcessmRNA export from nucleus

FMR1 ALYREF CHTOP

7.25e-0474493GO:0006406
GeneOntologyBiologicalProcessregulation of RNA stability

FMR1 LARP1 GIGYF2 LARP1B THRAP3

8.00e-04308495GO:0043487
GeneOntologyBiologicalProcessregulation of mRNA catabolic process

FMR1 LARP1 GIGYF2 LARP1B THRAP3

8.12e-04309495GO:0061013
GeneOntologyBiologicalProcessmRNA stabilization

LARP1 LARP1B THRAP3

8.15e-0477493GO:0048255
GeneOntologyBiologicalProcessalternative mRNA splicing, via spliceosome

SRSF2 FMR1 THRAP3

8.78e-0479493GO:0000380
GeneOntologyBiologicalProcessmammary gland epithelial cell differentiation

FGF2 PTCH1

9.21e-0419492GO:0060644
GeneOntologyCellularComponentcytoplasmic stress granule

HABP4 FMR1 UBAP2L PRRC2C LARP1 GIGYF2 LARP1B

2.93e-0996507GO:0010494
GeneOntologyCellularComponentcytoplasmic ribonucleoprotein granule

HABP4 UBAP2 FMR1 UBAP2L PRRC2C LARP1 GIGYF2 LARP1B

2.28e-07269508GO:0036464
GeneOntologyCellularComponentribonucleoprotein granule

HABP4 UBAP2 FMR1 UBAP2L PRRC2C LARP1 GIGYF2 LARP1B

3.73e-07287508GO:0035770
GeneOntologyCellularComponentnuclear protein-containing complex

KMT2D RBMXL2 SRSF2 KMT2B UBAP2L WDR33 ALYREF MBD2 SNRPD1 THRAP3 CHTOP INO80B

7.41e-0513775012GO:0140513
GeneOntologyCellularComponentnuclear body

HABP4 SRSF2 FMR1 ALYREF SCAF11 THRAP3 CHTOP INO80B TP53BP1

2.56e-04903509GO:0016604
GeneOntologyCellularComponenttranscription export complex

ALYREF CHTOP

3.64e-0412502GO:0000346
GeneOntologyCellularComponentproximal dendrite

FMR1 GIGYF2

5.77e-0415502GO:1990635
GeneOntologyCellularComponentSMN-Sm protein complex

FMR1 SNRPD1

9.34e-0419502GO:0034719
GeneOntologyCellularComponentexon-exon junction complex

ALYREF THRAP3

1.14e-0321502GO:0035145
GeneOntologyCellularComponentspliceosomal complex

RBMXL2 SRSF2 ALYREF SNRPD1

1.73e-03215504GO:0005681
GeneOntologyCellularComponentmethyltransferase complex

KMT2D KMT2B SNRPD1

2.20e-03108503GO:0034708
GeneOntologyCellularComponentU12-type spliceosomal complex

RBMXL2 SNRPD1

2.34e-0330502GO:0005689
HumanPhenoOromandibular dystonia

KMT2B TSPOAP1 UBAP2L

2.14e-0521143HP:0012048
HumanPhenoIrritability

FOXRED1 FMR1 ZNRF3 TSPOAP1 AVPR2 PTCH1

4.88e-05275146HP:0000737
HumanPhenoDepressed nasal tip

KMT2D UBAP2L PTCH1

5.20e-0528143HP:0000437
DomainDM15

LARP1 LARP1B

6.74e-062492SM00684
DomainDUF3697

UBAP2 UBAP2L

6.74e-062492PF12478
DomainFoP_C

ALYREF CHTOP

6.74e-062492IPR025715
DomainDM15

LARP1 LARP1B

6.74e-062492IPR006607
DomainFoP_duplication

ALYREF CHTOP

6.74e-062492PF13865
DomainFoP_duplication

ALYREF CHTOP

6.74e-062492SM01218
DomainDUF3697_Uba2

UBAP2 UBAP2L

6.74e-062492IPR022166
DomainFYrich_C

KMT2D KMT2B

6.71e-055492IPR003889
DomainFYrich_N

KMT2D KMT2B

6.71e-055492IPR003888
DomainFYRC

KMT2D KMT2B

6.71e-055492SM00542
DomainFYRN

KMT2D KMT2B

6.71e-055492SM00541
DomainFYRN

KMT2D KMT2B

6.71e-055492PF05964
DomainFYRC

KMT2D KMT2B

6.71e-055492PF05965
DomainFYRC

KMT2D KMT2B

6.71e-055492PS51543
DomainFYRN

KMT2D KMT2B

6.71e-055492PS51542
DomainLa

LARP1 LARP1B

1.40e-047492PF05383
DomainLupus_La_RNA-bd

LARP1 LARP1B

1.40e-047492IPR006630
DomainLA

LARP1 LARP1B

1.40e-047492SM00715
DomainHTH_LA

LARP1 LARP1B

1.40e-047492PS50961
DomainSET_dom

PRDM10 KMT2D KMT2B

3.05e-0450493IPR001214
DomainSET

PRDM10 KMT2D KMT2B

3.05e-0450493PS50280
DomainPost-SET_dom

KMT2D KMT2B

7.90e-0416492IPR003616
DomainPostSET

KMT2D KMT2B

7.90e-0416492SM00508
DomainPOST_SET

KMT2D KMT2B

7.90e-0416492PS50868
DomainEPHD

KMT2D KMT2B

1.51e-0322492PS51805
DomainRRM_dom_euk

RBMXL2 SRSF2

1.65e-0323492IPR003954
DomainRRM_1

RBMXL2 SRSF2

1.65e-0323492SM00361
Domain-

ILF3 RPS2

2.27e-03274923.30.160.20
DomaindsRBD_dom

ILF3 RPS2

2.44e-0328492IPR014720
DomainUBA

UBAP2 UBAP2L

2.80e-0330492SM00165
DomainUBA

UBAP2 UBAP2L

4.01e-0336492PF00627
DomainSET

KMT2D KMT2B

5.18e-0341492PF00856
DomainUBA

UBAP2 UBAP2L

5.95e-0344492IPR015940
DomainSET

KMT2D KMT2B

6.48e-0346492SM00317
DomainUBA

UBAP2 UBAP2L

6.76e-0347492PS50030
PathwayREACTOME_RNA_POLYMERASE_II_TRANSCRIPTION_TERMINATION

SRSF2 WDR33 ALYREF CHTOP

2.75e-0562404MM15426
PathwayREACTOME_RNA_POLYMERASE_II_TRANSCRIPTION_TERMINATION

SRSF2 WDR33 ALYREF CHTOP

3.74e-0567404M27694
PathwayREACTOME_TRANSPORT_OF_MATURE_TRANSCRIPT_TO_CYTOPLASM

SRSF2 WDR33 ALYREF CHTOP

9.10e-0584404M725
PathwayREACTOME_TRANSPORT_OF_MATURE_TRANSCRIPT_TO_CYTOPLASM

SRSF2 WDR33 ALYREF CHTOP

9.98e-0586404MM15413
Pubmed

SND1 binds SARS-CoV-2 negative-sense RNA and promotes viral RNA synthesis through NSP9.

HABP4 ILF3 SRSF2 FMR1 UBAP2L RPS2 PRRC2C LARP1 ALYREF SCAF11 LARP1B TOP3B THRAP3

1.67e-16258551337794589
Pubmed

The mRNA-bound proteome and its global occupancy profile on protein-coding transcripts.

ILF3 SRSF2 FMR1 UBAP2L ZC3H4 WDR33 RPS2 PRRC2C LARP1 GIGYF2 ALYREF SCAF11 ZNF579 LARP1B SNRPD1 TOP3B THRAP3 CHTOP

2.03e-16807551822681889
Pubmed

The PRMT5/WDR77 complex regulates alternative splicing through ZNF326 in breast cancer.

PRDM10 ILF3 FMR1 RPS2 PRRC2C LARP1 GIGYF2 ALYREF ZNF579 MBD2 SNRPD1

5.36e-16147551128977470
Pubmed

Arginine methylation and ubiquitylation crosstalk controls DNA end-resection and homologous recombination repair.

FOXRED1 ILF3 UBAP2 FMR1 UBAP2L ZC3H4 RPS2 PRRC2C LARP1 GIGYF2 ALYREF SCAF11 THRAP3 CHTOP

1.28e-13551551434728620
Pubmed

HDLBP Promotes Hepatocellular Carcinoma Proliferation and Sorafenib Resistance by Suppressing Trim71-dependent RAF1 Degradation.

AVEN HABP4 ILF3 UBAP2 SRSF2 FMR1 UBAP2L WDR33 BHLHA15 PRRC2C LARP1 ALYREF SCAF11 LARP1B MBD2 SNRPD1 THRAP3 CHTOP

1.71e-121371551836244648
Pubmed

A Degradation Motif in STAU1 Defines a Novel Family of Proteins Involved in Inflammation.

AVEN ILF3 UBAP2 FMR1 MAP1A UBAP2L ZC3H4 PRRC2C LARP1 GIGYF2 LARP1B SNRPD1 TOP3B THRAP3

5.02e-12724551436232890
Pubmed

WWP2 ubiquitylates RNA polymerase II for DNA-PK-dependent transcription arrest and repair at DNA breaks.

ILF3 UBAP2 SRSF2 FMR1 UBAP2L WDR33 RPS2 PRRC2C LARP1 GIGYF2 ALYREF THRAP3 CHTOP

1.07e-11615551331048545
Pubmed

Large-scale characterization of HeLa cell nuclear phosphoproteins.

KMT2D RBMXL2 ILF3 SRSF2 KMT2B UBAP2L ZC3H4 LARP1 GIGYF2 SCAF11 ZNF579 ZHX1 THRAP3 TP53BP1

1.22e-11774551415302935
Pubmed

Spatiotemporal-resolved protein networks profiling with photoactivation dependent proximity labeling.

ILF3 UBAP2 SRSF2 UBAP2L ZC3H4 WDR33 PRRC2C LARP1 ALYREF THRAP3 TP53BP1

3.01e-11399551135987950
Pubmed

Combinatorial targeting of a chromatin complex comprising Dot1L, menin and the tyrosine kinase BAZ1B reveals a new therapeutic vulnerability of endocrine therapy-resistant breast cancer.

ILF3 UBAP2 SRSF2 FMR1 KMT2B ZC3H4 RPS2 LARP1 GIGYF2 SCAF11 SNRPD1 THRAP3 CHTOP INO80B

4.01e-11847551435850772
Pubmed

RNA-binding proteins with basic-acidic dipeptide (BAD) domains self-assemble and aggregate in Alzheimer's disease.

ILF3 SRSF2 FMR1 ZC3H4 WDR33 RPS2 PRRC2C LARP1 ALYREF LARP1B SNRPD1 THRAP3 CHTOP

6.67e-11713551329802200
Pubmed

The Nse5/6-like SIMC1-SLF2 complex localizes SMC5/6 to viral replication centers.

ILF3 UBAP2 SRSF2 UBAP2L ZC3H4 WDR33 PRRC2C LARP1 GIGYF2 ALYREF SCAF11 THRAP3 INO80B TP53BP1

1.90e-10954551436373674
Pubmed

The cellular EJC interactome reveals higher-order mRNP structure and an EJC-SR protein nexus.

ILF3 SRSF2 FMR1 RPS2 ALYREF SNRPD1 THRAP3 CHTOP

2.64e-1016955823084401
Pubmed

SMYD3 Impedes Small Cell Lung Cancer Sensitivity to Alkylation Damage through RNF113A Methylation-Phosphorylation Cross-talk.

ILF3 FMR1 UBAP2L ZC3H4 RPS2 PRRC2C LARP1 GIGYF2 ALYREF MBD2 THRAP3 CHTOP

3.78e-10655551235819319
Pubmed

PTPN14 regulates Roquin2 stability by tyrosine dephosphorylation.

FOXRED1 ILF3 SRSF2 UBAP2L RPS2 PRRC2C LARP1 GIGYF2 ALYREF LARP1B SNRPD1 THRAP3

5.58e-10678551230209976
Pubmed

SRCAP complex promotes lung cancer progression by reprograming the oncogenic transcription of Hippo-YAP/TAZ signaling pathway.

KMT2D UBAP2 KMT2B UBAP2L WDR33 PRRC2C NFKBIE LARP1 GIGYF2 THRAP3 TP53BP1

8.77e-10549551138280479
Pubmed

Anticancer sulfonamides target splicing by inducing RBM39 degradation via recruitment to DCAF15.

ILF3 SRSF2 FMR1 UBAP2L RPS2 PRRC2C LARP1 ALYREF LARP1B SNRPD1 THRAP3 CHTOP

1.00e-09714551228302793
Pubmed

Loss of TRIM31 promotes breast cancer progression through regulating K48- and K63-linked ubiquitination of p53.

ILF3 SRSF2 FMR1 UBAP2L RPS2 LARP1 GIGYF2 ALYREF SNRPD1 THRAP3

1.09e-09421551034650049
Pubmed

CHD3 and CHD4 form distinct NuRD complexes with different yet overlapping functionality.

ILF3 FMR1 RPS2 PRRC2C LARP1 ALYREF SCAF11 MBD2 SNRPD1 THRAP3 CHTOP

2.41e-09605551128977666
Pubmed

Ovarian tumorB1-mediated heat shock transcription factor 1 deubiquitination is critical for glycolysis and development of endometriosis.

ILF3 SRSF2 RPS2 LARP1 GIGYF2 ALYREF THRAP3 CHTOP

3.69e-0923655836339263
Pubmed

Poly(ADP-ribosyl)ation of BRD7 by PARP1 confers resistance to DNA-damaging chemotherapeutic agents.

RBMXL2 ILF3 SRSF2 FMR1 ZC3H4 RPS2 PRRC2C ALYREF LARP1B THRAP3

4.32e-09486551030940648
Pubmed

SETD1A Methyltransferase Is Physically and Functionally Linked to the DNA Damage Repair Protein RAD18.

KMT2D KMT2B ZC3H4 PRRC2C ALYREF SCAF11 THRAP3 TP53BP1

5.98e-0925155831076518
Pubmed

Circular RNA circPVT1 promotes nasopharyngeal carcinoma metastasis via the β-TrCP/c-Myc/SRSF1 positive feedback loop.

ILF3 UBAP2 FMR1 UBAP2L RPS2 LARP1 ALYREF THRAP3

7.87e-0926055836199071
Pubmed

BPA modulates the WDR5/TET2 complex to regulate ERβ expression in eutopic endometrium and drives the development of endometriosis.

KMT2D ILF3 UBAP2 KMT2B UBAP2L RPS2 LARP1 ALYREF SNRPD1 THRAP3 CHTOP

1.28e-08711551133022573
Pubmed

Characterizing ZC3H18, a Multi-domain Protein at the Interface of RNA Production and Destruction Decisions.

ILF3 SRSF2 ZC3H4 WDR33 RPS2 PRRC2C LARP1 ALYREF SNRPD1 THRAP3 CHTOP

1.69e-08731551129298432
Pubmed

Analysis of HIV-1 Gag protein interactions via biotin ligase tagging.

UBAP2 UBAP2L PRRC2C LARP1 GIGYF2

2.45e-085455525631074
Pubmed

FBW7 suppresses ovarian cancer development by targeting the N6-methyladenosine binding protein YTHDF2.

SRSF2 FMR1 RPS2 LARP1 GIGYF2 ALYREF SCAF11 SNRPD1 THRAP3 CHTOP

3.21e-08601551033658012
Pubmed

Human transcription factor protein interaction networks.

KMT2D UBAP2 KMT2B UBAP2L WDR33 PRRC2C NFKBIE LARP1 GIGYF2 SCAF11 MBD2 ZHX1 INO80B TP53BP1

3.29e-081429551435140242
Pubmed

New roles for the de-ubiquitylating enzyme OTUD4 in an RNA-protein network and RNA granules.

ILF3 SRSF2 FMR1 UBAP2L PRRC2C LARP1 ALYREF TOP3B THRAP3

4.41e-0846255931138677
Pubmed

Hdac4 Interactions in Huntington's Disease Viewed Through the Prism of Multiomics.

CDAN1 HABP4 ILF3 FMR1 UBAP2L PRRC2C SNRPD1 TOP3B TP53BP1

5.59e-0847555931040226
Pubmed

Functional proteomics establishes the interaction of SIRT7 with chromatin remodeling complexes and expands its role in regulation of RNA polymerase I transcription.

SRSF2 FMR1 UBAP2L RPS2 PRRC2C LARP1 GIGYF2 ALYREF SCAF11 TP53BP1

6.95e-08653551022586326
Pubmed

H4K20me0 recognition by BRCA1-BARD1 directs homologous recombination to sister chromatids.

KMT2D ILF3 SRSF2 FMR1 KMT2B WDR33 RPS2 ALYREF SCAF11 MBD2 SNRPD1 THRAP3 CHTOP

8.35e-081294551330804502
Pubmed

A probability-based approach for high-throughput protein phosphorylation analysis and site localization.

ILF3 SRSF2 UBAP2L ZC3H4 RPS2 LARP1 ZNF579 THRAP3 TP53BP1

9.09e-0850355916964243
Pubmed

The Activation-Induced Assembly of an RNA/Protein Interactome Centered on the Splicing Factor U2AF2 Regulates Gene Expression in Human CD4 T Cells.

ILF3 SRSF2 LARP1 ALYREF SNRPD1 THRAP3 CHTOP

1.02e-0723955726641092
Pubmed

Matrix-screening reveals a vast potential for direct protein-protein interactions among RNA binding proteins.

ILF3 SRSF2 WDR33 RPS2 LARP1 LARP1B SRRM3 SNRPD1 TOP3B THRAP3

1.78e-07723551034133714
Pubmed

The HIV-1 Tat protein recruits a ubiquitin ligase to reorganize the 7SK snRNP for transcriptional activation.

ACAP1 RBMXL2 ILF3 SRSF2 UBAP2L RPS2 LARP1 ALYREF LARP1B SNRPD1 THRAP3 CHTOP

1.96e-071153551229845934
Pubmed

N-Terminal Acetyltransferase Naa40p Whereabouts Put into N-Terminal Proteoform Perspective.

ILF3 UBAP2 MAP1A UBAP2L ZC3H4 RPS2 PRRC2C LARP1 GIGYF2 CHTOP TP53BP1

2.01e-07934551133916271
Pubmed

A protein-RNA interaction atlas of the ribosome biogenesis factor AATF.

ILF3 RPS2 PRRC2C LARP1 THRAP3 CHTOP

2.23e-0716255631363146
Pubmed

mTORC1 activity regulates post-translational modifications of glycine decarboxylase to modulate glycine metabolism and tumorigenesis.

ILF3 FMR1 UBAP2L LARP1 GIGYF2 LARP1B THRAP3

2.56e-0727455734244482
Pubmed

Spatiotemporal profile of postsynaptic interactomes integrates components of complex brain disorders.

ILF3 UBAP2 FMR1 UBAP2L ZC3H4 PRRC2C GIGYF2 ALYREF TOP3B THRAP3 TP53BP1

2.72e-07963551128671696
Pubmed

The RNA-binding protein Snd1/Tudor-SN regulates hypoxia-responsive gene expression.

UBAP2 FMR1 UBAP2L PRRC2C LARP1

4.74e-079755537151849
Pubmed

Dynamic Protein Interactions of the Polycomb Repressive Complex 2 during Differentiation of Pluripotent Cells.

KMT2D FMR1 UBAP2L ZC3H4 PRRC2C ALYREF SCAF11 TP53BP1

7.20e-0746955827634302
Pubmed

A novel role for the peptidyl-prolyl cis-trans isomerase Cyclophilin A in DNA-repair following replication fork stalling via the MRE11-RAD50-NBS1 complex.

ILF3 FMR1 MAP1A ZC3H4 WDR33 NFKBIE ALYREF TP53BP1

7.55e-0747255838943005
Pubmed

Genome-Wide CRISPR-Cas9 Screens Expose Genetic Vulnerabilities and Mechanisms of Temozolomide Sensitivity in Glioblastoma Stem Cells.

UBAP2 UBAP2L PRRC2C GIGYF2 TOP3B

7.72e-0710755530995489
Pubmed

RSPO-LGR4 functions via IQGAP1 to potentiate Wnt signaling.

ILF3 ZNRF3 PRRC2C GIGYF2 SCAF11 THRAP3

8.15e-0720255624639526
Pubmed

Proteomic analyses reveal distinct chromatin-associated and soluble transcription factor complexes.

PRDM10 KMT2D BHLHA15 PRRC2C LARP1 ALYREF MBD2 TOP3B THRAP3 TP53BP1

8.40e-07857551025609649
Pubmed

The N-terminal domain of the Schaaf-Yang syndrome protein MAGEL2 likely has a role in RNA metabolism.

UBAP2L PRRC2C LARP1 GIGYF2

8.69e-074655434265304
Pubmed

The necdin interactome: evaluating the effects of amino acid substitutions and cell stress using proximity-dependent biotinylation (BioID) and mass spectrometry.

ILF3 UBAP2L RPS2 PRRC2C LARP1 GIGYF2 SNRPD1

8.92e-0733055732529326
Pubmed

PRISMA and BioID disclose a motifs-based interactome of the intrinsically disordered transcription factor C/EBPα.

KMT2D ILF3 KMT2B PRRC2C LARP1 ALYREF MBD2 SNRPD1 THRAP3 CHTOP TP53BP1

1.03e-061103551134189442
Pubmed

Menin and Menin-Associated Proteins Coregulate Cancer Energy Metabolism.

KMT2D ILF3 ZC3H4 WDR33 SNRPD1 THRAP3 TP53BP1

1.11e-0634155732971831
Pubmed

Ubiquitin-Independent Disassembly by a p97 AAA-ATPase Complex Drives PP1 Holoenzyme Formation.

ILF3 SRSF2 ZC3H4 RPS2 LARP1 THRAP3 CHTOP

1.62e-0636155730344098
Pubmed

Assembly of the U5 snRNP component PRPF8 is controlled by the HSP90/R2TP chaperones.

ILF3 SRSF2 UBAP2L ZC3H4 RPS2 PRRC2C LARP1 GIGYF2 ALYREF SCAF11 SNRPD1 THRAP3

1.70e-061415551228515276
Pubmed

Prohibitin 1 regulates tumor cell apoptosis via the interaction with X-linked inhibitor of apoptosis protein.

ILF3 SRSF2 UBAP2L RPS2 PRRC2C LARP1 GIGYF2 ALYREF SNRPD1

1.91e-0672555927025967
Pubmed

Kabuki syndrome stem cell models reveal locus specificity of histone methyltransferase 2D (KMT2D/MLL4).

KMT2D KMT2B

2.46e-06255235640156
Pubmed

Evidence for the association of the human regulatory protein Ki-1/57 with the translational machinery.

HABP4 FMR1

2.46e-06255221771594
Pubmed

Comparison of methylation episignatures in KMT2B- and KMT2D-related human disorders.

KMT2D KMT2B

2.46e-06255235506254
Pubmed

Alternative splicing of MBD2 supports self-renewal in human pluripotent stem cells.

SRSF2 MBD2

2.46e-06255224813856
Pubmed

UBAP2/UBAP2L regulate UV-induced ubiquitylation of RNA polymerase II and are the human orthologues of yeast Def1.

UBAP2 UBAP2L

2.46e-06255235633597
Pubmed

lingerer, a Drosophila gene involved in initiation and termination of copulation, encodes a set of novel cytoplasmic proteins.

UBAP2 UBAP2L

2.46e-06255212524348
Pubmed

Identification of proteins associated with ligand-activated estrogen receptor α in human breast cancer cell nuclei by tandem affinity purification and nano LC-MS/MS.

SRSF2 FMR1 UBAP2L RPS2 SNRPD1 THRAP3

2.50e-0624555621182205
Pubmed

Immunoprecipitation and mass spectrometry defines an extensive RBM45 protein-protein interaction network.

ILF3 ZC3H4 LARP1 SNRPD1 THRAP3

2.52e-0613655526979993
Pubmed

The E3 ubiquitin ligase HECTD1 contributes to cell proliferation through an effect on mitosis.

FMR1 UBAP2L RPS2 PRRC2C LARP1 ALYREF SCAF11 TOP3B CHTOP

2.78e-0675955935915203
Pubmed

PTIP associates with MLL3- and MLL4-containing histone H3 lysine 4 methyltransferase complex.

KMT2D KMT2B TP53BP1

3.00e-061855317500065
Pubmed

The PHLPP1 N-Terminal Extension Is a Mitotic Cdk1 Substrate and Controls an Interactome Switch.

UBAP2 UBAP2L PRRC2C LARP1 PHLPP1 GIGYF2

3.21e-0625655633397691
Pubmed

Identifying biological pathways that underlie primordial short stature using network analysis.

ILF3 SRSF2 UBAP2L ZC3H4 RPS2 GIGYF2 ALYREF SNRPD1 THRAP3 CHTOP

4.12e-061024551024711643
Pubmed

TRIM28-mediated nucleocapsid protein SUMOylation enhances SARS-CoV-2 virulence.

ILF3 RPS2 LARP1 ALYREF SNRPD1 THRAP3 CHTOP

5.12e-0643055738172120
Pubmed

Reciprocal interaction between SIRT6 and APC/C regulates genomic stability.

ILF3 UBAP2 FMR1 UBAP2L RPS2 LARP1 TP53BP1

5.95e-0644055734244565
Pubmed

Molecular Characterization of the Oncogene BTF3 and Its Targets in Colorectal Cancer.

ILF3 SRSF2 FMR1 UBAP2L RPS2 LARP1 THRAP3 CHTOP

6.09e-0662655833644029
Pubmed

Comparative Proteomics and Interactome Analysis of the SARS-CoV-2 Nucleocapsid Protein in Human and Bat Cell Lines.

ILF3 RPS2 LARP1 ALYREF CHTOP

7.09e-0616855539066279
Pubmed

Suppression of ACE2 SUMOylation protects against SARS-CoV-2 infection through TOLLIP-mediated selective autophagy.

UBAP2L RPS2 PRRC2C LARP1 GIGYF2 SNRPD1 THRAP3 CHTOP

7.24e-0664155836057605
Pubmed

Mapping interactions between mRNA export factors in living cells.

ALYREF CHTOP

7.36e-06355223826332
Pubmed

Histone methyltransferase MLL4 controls myofiber identity and muscle performance through MEF2 interaction.

KMT2D KMT2B

7.36e-06355232544095
Pubmed

The histone methyltransferase KMT2B is required for RNA polymerase II association and protection from DNA methylation at the MagohB CpG island promoter.

KMT2D KMT2B

7.36e-06355223358417
Pubmed

Mutations of PTCH1, MLL2, and MLL3 are not frequent events in hepatoblastoma.

KMT2D PTCH1

7.36e-06355222183980
Pubmed

The DNA sequence and analysis of human chromosome 13.

PRR20C PRR20D PRR20B PRR20E PRR20A

7.51e-0617055515057823
Pubmed

Characterization of Staufen 1 ribonucleoprotein complexes.

ILF3 FMR1 RPS2

8.40e-062555315303970
Pubmed

Neuron-specific protein network mapping of autism risk genes identifies shared biological mechanisms and disease-relevant pathologies.

UBAP2 FMR1 MAP1A TSPOAP1 UBAP2L RPS2 PRRC2C THRAP3 CHTOP TP53BP1

1.05e-051139551036417873
Pubmed

Combinatorial CRISPR screen identifies fitness effects of gene paralogues.

KMT2B ZC3H4 LARP1 LARP1B SRRM3

1.16e-0518655533637726
Pubmed

Gain of Additional BIRC3 Protein Functions through 3'-UTR-Mediated Protein Complex Formation.

ILF3 SRSF2 FMR1 UBAP2L RPS2 LARP1 GIGYF2 ALYREF SNRPD1 THRAP3 CHTOP

1.20e-051425551130948266
Pubmed

Proteomic analysis of α4β1 integrin adhesion complexes reveals α-subunit-dependent protein recruitment.

ILF3 UBAP2L RPS2 PRRC2C LARP1 ALYREF SNRPD1

1.21e-0549155722623428
Pubmed

TNIP2 is a Hub Protein in the NF-κB Network with Both Protein and RNA Mediated Interactions.

SRSF2 FMR1 ZC3H4 WDR33 NFKBIE LARP1 GIGYF2 ALYREF THRAP3

1.33e-0592255927609421
Pubmed

ZBTB2 protein is a new partner of the Nucleosome Remodeling and Deacetylase (NuRD) complex.

ILF3 SRSF2 FMR1 ALYREF MBD2 THRAP3

1.37e-0533055633301849
Pubmed

Crucial roles for interactions between MLL3/4 and INI1 in nuclear receptor transactivation.

KMT2D KMT2B

1.47e-05455219221051
Pubmed

MLL2 is required in oocytes for bulk histone 3 lysine 4 trimethylation and transcriptional silencing.

KMT2D KMT2B

1.47e-05455220808952
Pubmed

Mutations in Mll2, an H3K4 methyltransferase, result in insulin resistance and impaired glucose tolerance in mice.

KMT2D KMT2B

1.47e-05455223826075
Pubmed

A subset of mixed lineage leukemia proteins has plant homeodomain (PHD)-mediated E3 ligase activity.

KMT2D KMT2B

1.47e-05455223129768
Pubmed

Aven recognition of RNA G-quadruplexes regulates translation of the mixed lineage leukemia protooncogenes.

AVEN KMT2B

1.47e-05455226267306
Pubmed

ARIH2 Is a Vif-Dependent Regulator of CUL5-Mediated APOBEC3G Degradation in HIV Infection.

RBMXL2 ILF3 SRSF2 RPS2 ALYREF SNRPD1

1.51e-0533655631253590
Pubmed

Cdh1-APC Regulates Protein Synthesis and Stress Granules in Neurons through an FMRP-Dependent Mechanism.

ILF3 FMR1 RPS2 LARP1 ALYREF

1.53e-0519755532434143
Pubmed

Disruption of the lamin A and matrin-3 interaction by myopathic LMNA mutations.

ILF3 RPS2 ALYREF SNRPD1

1.67e-059655425948554
Pubmed

LRRC31 inhibits DNA repair and sensitizes breast cancer brain metastasis to radiation therapy.

UBAP2L ZC3H4 PRRC2C LARP1 TOP3B

1.73e-0520255533005030
Pubmed

Oct4 links multiple epigenetic pathways to the pluripotency network.

ILF3 UBAP2L WDR33 GIGYF2 TP53BP1

1.77e-0520355522083510
Pubmed

The interactome of CLUH reveals its association to SPAG5 and its co-translational proximity to mitochondrial proteins.

UBAP2 UBAP2L PRRC2C LARP1 THRAP3

1.77e-0520355535012549
Pubmed

Transcriptome characterization elucidates signaling networks that control human ES cell growth and differentiation.

HABP4 FMR1 ZC3H4 DEDD2 FGF2 ZNF579 SNRPD1 TOP3B ZHX1 INO80B

1.82e-051215551015146197
Pubmed

MYC multimers shield stalled replication forks from RNA polymerase.

ILF3 SRSF2 ZC3H4 RPS2 ALYREF SCAF11 MBD2 THRAP3 TP53BP1

2.30e-0598955936424410
Pubmed

BioID Performed on Golgi Enriched Fractions Identify C10orf76 as a GBF1 Binding Protein Essential for Golgi Maintenance and Secretion.

UBAP2 PRRC2C LARP1 GIGYF2 CHTOP

2.38e-0521655531519766
Pubmed

Targeting USP10 induces degradation of oncogenic ANLN in esophageal squamous cell carcinoma.

ILF3 FMR1 RPS2 PRRC2C LARP1 ALYREF SCAF11 SNRPD1 THRAP3 CHTOP

2.44e-051257551036526897
Pubmed

Evolving Catalytic Properties of the MLL Family SET Domain.

KMT2D KMT2B

2.45e-05555226320581
Pubmed

MLL2, Not MLL1, Plays a Major Role in Sustaining MLL-Rearranged Acute Myeloid Leukemia.

KMT2D KMT2B

2.45e-05555228609655
Pubmed

Mapping of FMR1, the gene implicated in fragile X-linked mental retardation, on the mouse X chromosome.

CDR1 FMR1

2.45e-0555521572655
InteractionPRMT1 interactions

HABP4 FOXRED1 ILF3 UBAP2 FMR1 UBAP2L ZC3H4 WDR33 RPS2 PRRC2C LARP1 FGF2 GIGYF2 ALYREF SCAF11 PTCH1 MBD2 SNRPD1 THRAP3 CHTOP

1.68e-139295520int:PRMT1
InteractionRBM42 interactions

PRR20C PRR20D ILF3 PRR20B FMR1 PRR20E RPS2 PRRC2C PRR20A LARP1 ALYREF SNRPD1 THRAP3

3.91e-123315513int:RBM42
InteractionZCCHC14 interactions

PRR20C PRR20D PRR20B PRR20E UBAP2L PRR20A TOP3B

7.33e-1237557int:ZCCHC14
InteractionSNRPC interactions

HABP4 PRR20C PRR20D ILF3 PRR20B PRR20E PRR20A LARP1 GIGYF2 ALYREF SCAF11 SNRPD1 THRAP3 CHTOP

8.77e-124405514int:SNRPC
InteractionZNF683 interactions

PRR20C PRR20D PRR20B PRR20E PRR20A

3.13e-1110555int:ZNF683
InteractionCELF4 interactions

PRR20C PRR20D PRR20B PRR20E PRR20A

5.73e-1111555int:CELF4
InteractionSNRPB interactions

PRR20C PRR20D ILF3 PRR20B PRR20E ZC3H4 PRR20A GIGYF2 ALYREF SCAF11 SNRPD1 TOP3B THRAP3 CHTOP

7.45e-115175514int:SNRPB
InteractionBEND2 interactions

PRR20C PRR20D PRR20B PRR20E PRR20A

9.81e-1112555int:BEND2
InteractionWDR77 interactions

PRDM10 ILF3 FMR1 RPS2 PRRC2C LARP1 GIGYF2 ALYREF ZNF579 MBD2 SNRPD1 CHTOP

2.00e-103615512int:WDR77
InteractionPTTG2 interactions

PRR20C PRR20D PRR20B PRR20E PRR20A

2.47e-1014555int:PTTG2
InteractionC1QBP interactions

HABP4 FOXRED1 ILF3 FMR1 PRR20E UBAP2L RPS2 BHLHA15 NFKBIE PRR20A ALYREF MBD2 SNRPD1 TOP3B THRAP3 CHTOP

2.55e-108065516int:C1QBP
InteractionZNF385C interactions

PRR20C PRR20D PRR20B PRR20E PRR20A ZNF579

3.26e-1033556int:ZNF385C
InteractionC10orf55 interactions

PRR20C PRR20D UBAP2 PRR20B PRR20E PRR20A TP53BP1

4.68e-1065557int:C10orf55
InteractionMBNL3 interactions

PRR20C PRR20D PRR20B PRR20E PRR20A

5.36e-1016555int:MBNL3
InteractionPRR34 interactions

PRR20C PRR20D PRR20B PRR20E PRR20A

2.47e-0921555int:PRR34
InteractionTPRX1 interactions

PRR20C PRR20D PRR20B PRR20E PRR20A

2.47e-0921555int:TPRX1
InteractionDOT1L interactions

ILF3 UBAP2 SRSF2 FMR1 ZC3H4 RPS2 LARP1 GIGYF2 ALYREF SCAF11 SNRPD1 TOP3B THRAP3 CHTOP INO80B

2.56e-098075515int:DOT1L
InteractionKRTAP19-1 interactions

PRR20C PRR20D PRR20B PRR20E PRR20A INO80B

3.07e-0947556int:KRTAP19-1
InteractionOXER1 interactions

PRR20C PRR20D PRR20B PRR20E PRR20A TP53BP1

4.52e-0950556int:OXER1
InteractionSRPK2 interactions

PRR20C PRR20D ILF3 PRR20B SRSF2 FMR1 PRR20E PRRC2C PRR20A SCAF11 SNRPD1 THRAP3 CHTOP INO80B

5.17e-097175514int:SRPK2
InteractionRBM23 interactions

PRR20C PRR20D PRR20B PRR20E BHLHA15 PRR20A ZNF579

6.47e-0994557int:RBM23
InteractionEIF4ENIF1 interactions

PRR20C PRR20D PRR20B FMR1 PRR20E UBAP2L PRRC2C PRR20A PHLPP1 TOP3B

7.45e-093005510int:EIF4ENIF1
InteractionC3orf36 interactions

PRR20C PRR20D PRR20B PRR20E PRR20A

7.91e-0926555int:C3orf36
InteractionCHD3 interactions

HABP4 ILF3 FMR1 RPS2 PRRC2C LARP1 PHLPP1 ALYREF SCAF11 MBD2 SNRPD1 ZHX1 THRAP3 CHTOP

1.03e-087575514int:CHD3
InteractionRHOXF2 interactions

PRR20C PRR20D UBAP2 PRR20B PRR20E DEDD2 PRR20A

1.32e-08104557int:RHOXF2
InteractionCPSF6 interactions

ILF3 UBAP2L ZC3H4 WDR33 PHLPP1 ALYREF SCAF11 PTCH1 SNRPD1 THRAP3 CHTOP TP53BP1

1.39e-085265512int:CPSF6
InteractionSH3RF1 interactions

ACAP1 PRR20C PRR20D PRR20B PRR20E PRR20A TOP3B

1.71e-08108557int:SH3RF1
InteractionFMR1 interactions

HABP4 ILF3 UBAP2 FMR1 UBAP2L PRRC2C LARP1 GIGYF2 TOP3B THRAP3 CHTOP TP53BP1

1.72e-085365512int:FMR1
InteractionBMI1 interactions

HABP4 ILF3 UBAP2L ZC3H4 WDR33 PRRC2C LARP1 GIGYF2 ALYREF SCAF11 MBD2 THRAP3 CHTOP

1.78e-086595513int:BMI1
InteractionRC3H2 interactions

FOXRED1 ILF3 SRSF2 FMR1 UBAP2L RPS2 PRRC2C LARP1 GIGYF2 ALYREF SNRPD1 TOP3B THRAP3

2.05e-086675513int:RC3H2
InteractionBHLHE40 interactions

PRR20C PRR20D PRR20B PRR20E PRR20A ZHX1 TP53BP1

3.36e-08119557int:BHLHE40
InteractionWWP2 interactions

ILF3 UBAP2 SRSF2 FMR1 UBAP2L WDR33 RPS2 PRRC2C LARP1 GIGYF2 ALYREF PTCH1 THRAP3 CHTOP

3.80e-088405514int:WWP2
InteractionHLX interactions

PRR20C PRR20D PRR20B PRR20E PRR20A

5.13e-0837555int:HLX
InteractionPITX1 interactions

PRR20C PRR20D PRR20B PRR20E PRR20A TOP3B TP53BP1

5.27e-08127557int:PITX1
InteractionBANP interactions

PRR20C PRR20D UBAP2 PRR20B PRR20E PRR20A HHIPL1 TOP3B INO80B

5.63e-08277559int:BANP
InteractionSNRPA interactions

ILF3 SRSF2 ZC3H4 WDR33 PRRC2C ALYREF SCAF11 SNRPD1 TOP3B THRAP3 CHTOP

6.05e-084825511int:SNRPA
InteractionVAC14 interactions

PRR20C PRR20D PRR20B PRR20E PRR20A PTCH1 TOP3B TP53BP1

6.94e-08201558int:VAC14
InteractionTBX6 interactions

PRR20C PRR20D PRR20B PRR20E PRR20A

8.74e-0841555int:TBX6
InteractionFAM222B interactions

PRR20C PRR20D PRR20B PRR20E PRR20A

9.90e-0842555int:FAM222B
InteractionVPS37C interactions

PRR20C PRR20D ILF3 UBAP2 PRR20B PRR20E PRR20A

1.08e-07141557int:VPS37C
InteractionSAMD11 interactions

PRR20C PRR20D PRR20B PRR20E PRR20A

1.12e-0743555int:SAMD11
InteractionBICRAL interactions

PRR20C PRR20D PRR20B PRR20E PRR20A

1.12e-0743555int:BICRAL
InteractionRPS20 interactions

HABP4 ILF3 UBAP2 FMR1 UBAP2L RPS2 PRRC2C LARP1 GIGYF2 LARP1B TOP3B

1.14e-075135511int:RPS20
InteractionBTRC interactions

RBMXL2 ILF3 UBAP2 FMR1 ZNRF3 UBAP2L RPS2 NFKBIE LARP1 PHLPP1 ALYREF PTCH1 THRAP3

1.18e-077755513int:BTRC
InteractionDAZL interactions

ILF3 UBAP2 FMR1 UBAP2L PRRC2C LARP1B TOP3B

1.31e-07145557int:DAZL
InteractionSP4 interactions

PRR20C PRR20D PRR20B PRR20E PRR20A

1.58e-0746555int:SP4
InteractionANKRD17 interactions

ILF3 UBAP2 FMR1 UBAP2L PRRC2C PHLPP1 GIGYF2 TOP3B

1.71e-07226558int:ANKRD17
InteractionRC3H1 interactions

ILF3 SRSF2 FMR1 UBAP2L ZC3H4 RPS2 PRRC2C LARP1 ALYREF LARP1B SNRPD1 THRAP3

2.19e-076775512int:RC3H1
InteractionFXR1 interactions

HABP4 ILF3 UBAP2 FMR1 UBAP2L PRRC2C GIGYF2 ALYREF LARP1B TOP3B THRAP3 TP53BP1

2.26e-076795512int:FXR1
InteractionSNRNP70 interactions

ILF3 SRSF2 FMR1 ZC3H4 WDR33 RPS2 PRRC2C LARP1 ALYREF SCAF11 LARP1B SNRPD1 THRAP3 CHTOP

2.66e-079845514int:SNRNP70
InteractionRNF113A interactions

ILF3 FMR1 UBAP2L ZC3H4 RPS2 PRRC2C LARP1 GIGYF2 ALYREF MBD2 THRAP3 CHTOP

2.77e-076925512int:RNF113A
InteractionPABPC1 interactions

ILF3 UBAP2 FMR1 UBAP2L RPS2 PRRC2C LARP1 GIGYF2 ALYREF LARP1B SNRPD1 TOP3B

3.08e-076995512int:PABPC1
InteractionSMC5 interactions

ILF3 UBAP2 SRSF2 UBAP2L ZC3H4 WDR33 PRRC2C LARP1 GIGYF2 ALYREF SCAF11 THRAP3 INO80B TP53BP1

3.24e-0710005514int:SMC5
InteractionSRSF1 interactions

CDR1 HABP4 SRSF2 PRRC2C LARP1 ALYREF SCAF11 LARP1B SNRPD1 THRAP3 TP53BP1

3.26e-075705511int:SRSF1
InteractionCAPRIN1 interactions

ILF3 UBAP2 FMR1 UBAP2L RPS2 PRRC2C LARP1 GIGYF2 LARP1B TOP3B

3.39e-074515510int:CAPRIN1
InteractionCHCHD2 interactions

FOXRED1 ADRA2C BHLHA15 PRRC2C ALYREF ZNF579 THRAP3 CHTOP

3.47e-07248558int:CHCHD2
InteractionTRIM31 interactions

ILF3 SRSF2 FMR1 UBAP2L RPS2 LARP1 GIGYF2 ALYREF SNRPD1 THRAP3

3.60e-074545510int:TRIM31
InteractionHDLBP interactions

ILF3 SRSF2 FMR1 UBAP2L WDR33 BHLHA15 LARP1 PHLPP1 ALYREF SNRPD1 TOP3B THRAP3 CHTOP

3.66e-078555513int:HDLBP
InteractionVENTX interactions

PRR20C PRR20D UBAP2 PRR20B PRR20E PRR20A

3.86e-07104556int:VENTX
InteractionRIPPLY1 interactions

PRR20C PRR20D PRR20B PRR20E PRR20A

3.94e-0755555int:RIPPLY1
InteractionPHF1 interactions

PRR20C PRR20D PRR20B FMR1 PRR20E PRR20A MBD2

4.20e-07172557int:PHF1
InteractionMEN1 interactions

KMT2D ILF3 UBAP2 SRSF2 KMT2B ZC3H4 WDR33 LARP1 GIGYF2 SCAF11 SNRPD1 THRAP3 CHTOP TP53BP1

4.58e-0710295514int:MEN1
InteractionMYCN interactions

HABP4 ILF3 SRSF2 FMR1 UBAP2L ZC3H4 RPS2 PRRC2C LARP1 ALYREF SCAF11 SNRPD1 TOP3B THRAP3 CHTOP INO80B

4.63e-0713735516int:MYCN
InteractionLSM14A interactions

ILF3 UBAP2 FMR1 UBAP2L PRRC2C LARP1B PTCH1 TOP3B

4.97e-07260558int:LSM14A
InteractionPAXIP1 interactions

KMT2D SRSF2 KMT2B WDR33 LARP1 ALYREF TOP3B THRAP3 TP53BP1

5.05e-07359559int:PAXIP1
InteractionFOXH1 interactions

PRR20C PRR20D UBAP2 PRR20B PRR20E PRR20A

5.09e-07109556int:FOXH1
InteractionATXN1 interactions

PRR20C PRR20D UBAP2 PRR20B SRSF2 KMT2B PRR20E UBAP2L PRRC2C PRR20A LARP1 SNRPD1 ZHX1 THRAP3

5.14e-0710395514int:ATXN1
InteractionZBTB32 interactions

PRR20C PRR20D PRR20B PRR20E PRR20A

5.16e-0758555int:ZBTB32
InteractionRBM8A interactions

AVEN ILF3 FMR1 RPS2 PRRC2C LARP1 ALYREF TOP3B THRAP3 CHTOP

5.24e-074735510int:RBM8A
InteractionRBM39 interactions

ILF3 SRSF2 FMR1 UBAP2L RPS2 BHLHA15 PRRC2C LARP1 ALYREF LARP1B SNRPD1 THRAP3 CHTOP INO80B

5.33e-0710425514int:RBM39
InteractionMAGOH interactions

ILF3 SRSF2 FMR1 RPS2 ALYREF SNRPD1 THRAP3 CHTOP

5.58e-07264558int:MAGOH
InteractionFAM9A interactions

PRR20C PRR20D PRR20B PRR20E PRR20A

5.62e-0759555int:FAM9A
InteractionHDAC4 interactions

CDAN1 HABP4 ILF3 FMR1 UBAP2L PRRC2C NFKBIE GIGYF2 SNRPD1 TOP3B THRAP3 TP53BP1

5.98e-077445512int:HDAC4
InteractionCABP2 interactions

PRR20C PRR20D PRR20B PRR20E PRR20A

6.66e-0761555int:CABP2
InteractionYBX1 interactions

HABP4 ILF3 FMR1 UBAP2L RPS2 BHLHA15 LARP1 GIGYF2 ALYREF LARP1B SNRPD1 TOP3B

6.70e-077525512int:YBX1
InteractionTHAP1 interactions

PRR20C PRR20D PRR20B PRR20E PRR20A INO80B

8.55e-07119556int:THAP1
InteractionCEBPB interactions

KMT2D ILF3 SRSF2 UBAP2L ZC3H4 WDR33 RPS2 PRRC2C LARP1 ALYREF MBD2 SNRPD1 TOP3B THRAP3 CHTOP TP53BP1

9.01e-0714435516int:CEBPB
InteractionMKRN2 interactions

FMR1 UBAP2L PRRC2C LARP1 ALYREF LARP1B PTCH1 TOP3B THRAP3

9.03e-07385559int:MKRN2
InteractionWDR5 interactions

KMT2D ILF3 UBAP2 KMT2B UBAP2L RPS2 PRRC2C LARP1 GIGYF2 ALYREF SNRPD1 THRAP3 CHTOP INO80B

1.03e-0611015514int:WDR5
InteractionSMAP1 interactions

PRR20C PRR20D PRR20B PRR20E PRR20A

1.07e-0667555int:SMAP1
InteractionCELF1 interactions

ILF3 UBAP2 UBAP2L ZC3H4 WDR33 PRRC2C ALYREF TOP3B

1.07e-06288558int:CELF1
InteractionU2AF2 interactions

ILF3 SRSF2 LARP1 GIGYF2 ALYREF SCAF11 SNRPD1 THRAP3 CHTOP INO80B TP53BP1

1.21e-066515511int:U2AF2
InteractionTBX3 interactions

PRR20C PRR20D PRR20B PRR20E PRR20A

1.24e-0669555int:TBX3
InteractionANAPC15 interactions

AVEN HABP4 ZC3H4 GIGYF2 SCAF11 TOP3B

1.31e-06128556int:ANAPC15
InteractionRBM47 interactions

UBAP2 UBAP2L RPS2 PRRC2C LARP1 LARP1B TOP3B

1.32e-06204557int:RBM47
InteractionBHLHA15 interactions

PRDM10 BHLHA15 LARP1 ZNF579 CHTOP

1.43e-0671555int:BHLHA15
InteractionPOLR2A interactions

KMT2D ILF3 SRSF2 ZC3H4 PHLPP1 ALYREF MBD2 SNRPD1 TOP3B INO80B

1.63e-065365510int:POLR2A
InteractionANKHD1 interactions

PRR20C PRR20D PRR20B PRR20E NFKBIE PRR20A TOP3B

1.93e-06216557int:ANKHD1
InteractionESRP1 interactions

PRR20C PRR20D PRR20B PRR20E PRR20A

2.14e-0677555int:ESRP1
InteractionKIF23 interactions

RBMXL2 ILF3 SRSF2 FMR1 WDR33 RPS2 LARP1 PHLPP1 ALYREF LARP1B TOP3B THRAP3 INO80B

2.98e-0610315513int:KIF23
InteractionPOU6F2 interactions

PRR20C PRR20D PRR20B PRR20E PRR20A TP53BP1

3.05e-06148556int:POU6F2
InteractionPRR35 interactions

PRR20C PRR20D PRR20B PRR20E PRR20A

3.10e-0683555int:PRR35
InteractionRBPMS2 interactions

PRR20C PRR20D PRR20B PRR20E PRR20A

3.10e-0683555int:RBPMS2
InteractionRPS16 interactions

AVEN PRDM10 ILF3 FMR1 RPS2 BHLHA15 PRRC2C LARP1 ALYREF TOP3B INO80B

3.37e-067245511int:RPS16
InteractionKIF20A interactions

RBMXL2 ILF3 SRSF2 FMR1 UBAP2L WDR33 RPS2 LARP1 PHLPP1 GIGYF2 ALYREF SNRPD1 THRAP3

3.71e-0610525513int:KIF20A
InteractionLARP4B interactions

UBAP2 FMR1 UBAP2L PRRC2C LARP1 LARP1B TOP3B

3.88e-06240557int:LARP4B
InteractionDMRT3 interactions

PRR20C PRR20D PRR20B PRR20E PRR20A

3.92e-0687555int:DMRT3
InteractionFAM120A interactions

ILF3 FMR1 UBAP2L RPS2 LARP1 ALYREF LARP1B TOP3B

4.47e-06349558int:FAM120A
InteractionPRR20B interactions

PRR20C PRR20D PRR20B PRR20E PRR20A

4.63e-0690555int:PRR20B
InteractionPRR20C interactions

PRR20C PRR20D PRR20B PRR20E PRR20A

4.63e-0690555int:PRR20C
Cytoband13q21.1

PRR20C PRR20D PRR20B PRR20E PRR20A

2.62e-121355513q21.1
CytobandEnsembl 112 genes in cytogenetic band chr13q21

PRR20C PRR20D PRR20B PRR20E PRR20A

3.10e-07117555chr13q21
CytobandEnsembl 112 genes in cytogenetic band chr15q15

CDAN1 MAP1A TP53BP1

7.47e-04147553chr15q15
GeneFamilyLa ribonucleoprotein domain containing|RNA binding motif containing

LARP1 LARP1B

6.75e-057332625
GeneFamilyAtaxins|Trinucleotide repeat containing

KMT2D GIGYF2

9.44e-0425332775
GeneFamilyZinc fingers C2H2-type|Lysine methyltransferases|PR/SET domain family

KMT2D KMT2B

1.75e-0334332487
GeneFamilyRNA binding motif containing

RBMXL2 SRSF2 ALYREF

6.78e-03213333725
GeneFamilyPHD finger proteins

KMT2D KMT2B

1.17e-029033288
CoexpressionSCHAEFFER_PROSTATE_DEVELOPMENT_6HR_DN

ILF3 UBAP2L PRRC2C GIGYF2 ALYREF ZHX1 THRAP3

3.20e-05467517M1347
CoexpressionSCHAEFFER_PROSTATE_DEVELOPMENT_6HR_DN

ILF3 UBAP2L PRRC2C GIGYF2 ALYREF ZHX1 THRAP3

4.02e-05484517MM999
CoexpressionGSE43863_TH1_VS_LY6C_INT_CXCR5POS_EFFECTOR_CD4_TCELL_DN

HABP4 ACAP1 ZNRF3 PHLPP1 GIGYF2

4.35e-05200515M9765
CoexpressionGSE42724_NAIVE_VS_B1_BCELL_UP

FMR1 ZNRF3 NFKBIE LARP1 PTCH1

4.35e-05200515M9790
ToppCell21-Trachea-Immune-Immune|Trachea / Age, Tissue, Lineage and Cell class

AVEN CDR1 HABP4 HHIPL1

1.82e-051345244f0465324cc5b443ebadb68aef63be79b74f6ff9
ToppCellfacs-Lung-EPCAM-3m-Endothelial-vein_endothelial_cell|Lung / Lung_Trachea - method, tissue, subtissue, age, lineage, cell ontology and free annotation

ILF3 KMT2B GIGYF2 ZHX1

4.02e-051645241d0d88132baaa3154c3e6e4ef0aff795afab08a2
ToppCellfacs-Lung-EPCAM-3m-Endothelial-Vein_endothelial_cell|Lung / Lung_Trachea - method, tissue, subtissue, age, lineage, cell ontology and free annotation

ILF3 KMT2B GIGYF2 ZHX1

4.02e-05164524bd2e10b015d5e6a338675500ec5d81dc39583b3e
ToppCellfacs-Brain_Non-Myeloid-Striatum-24m-Neuronal-nan|Brain_Non-Myeloid / Brain_Non-Myeloid_Brain_Myeloid - method, tissue, subtissue, age, lineage, cell ontology and free annotation

CDR1 MAP1A SRRM3 KCNH3

5.53e-051785241bddbc083c36657bd6910f7466126ab325e88176
ToppCellfacs-Brain_Non-Myeloid-Striatum-24m-Neuronal-neuron|Brain_Non-Myeloid / Brain_Non-Myeloid_Brain_Myeloid - method, tissue, subtissue, age, lineage, cell ontology and free annotation

CDR1 MAP1A SRRM3 KCNH3

5.53e-05178524a74e5a390cbeaca9de1fdb7b2a0e50783bd202dd
ToppCelldroplet-Lung-LUNG-30m-Lymphocytic-Ly6g5b+_T|Lung / Lung_Trachea - method, tissue, subtissue, age, lineage, cell ontology and free annotation

ACAP1 ADRA2C ABHD8 SPRN

5.77e-051805245c649e2b3f5a53c0040b69df6e289fb3427ef2db
ToppCelldroplet-Lung-30m-Hematologic-lymphocytic-immature_innate_lymphoid_cell-Ly6g5b+_T|30m / method, tissue, age, lineage, sublineage, cell ontologies, cell type and subtype

ACAP1 ADRA2C ABHD8 SPRN

6.29e-05184524eeed75984ff111c0d1750df2f978163a42f20207
ToppCelldroplet-Lung-30m-Hematologic-lymphocytic-immature_innate_lymphoid_cell|30m / method, tissue, age, lineage, sublineage, cell ontologies, cell type and subtype

ACAP1 ADRA2C ABHD8 SPRN

6.29e-051845243d8008f8d2e39c0d7a3cabc45620027491da03cf
ToppCelldroplet-Large_Intestine-COLON_PROXIMAL|Large_Intestine / Large_Intestine_Pancreas_Liver - method, tissue, subtissue, age, lineage, cell ontology and free annotation

PRRC2C SCAF11 LARP1B THRAP3

7.27e-0519152460c986d2dcbc19d9338c03da6cb5e1d92fd48f8e
ToppCelldroplet-Large_Intestine-COLON_PROXIMAL-30m|Large_Intestine / Large_Intestine_Pancreas_Liver - method, tissue, subtissue, age, lineage, cell ontology and free annotation

PRRC2C SCAF11 LARP1B THRAP3

7.27e-05191524973117730d6ba5f127e7a0bfabfd0ff2ca7ac131
ToppCellH1299-infected|H1299 / Cell line, Condition and Strain

ILF3 SRSF2 PRRC2C LARP1

7.41e-051925249cf8049bdc3e0f81ce69042beac72b08d8f38b4e
ToppCellfacs-Brain_Non-Myeloid-Cortex-24m-Neuronal|Brain_Non-Myeloid / Brain_Non-Myeloid_Brain_Myeloid - method, tissue, subtissue, age, lineage, cell ontology and free annotation

CDR1 TSPOAP1 SRRM3 KCNH3

7.56e-05193524be28070c049e7cb68bcd54f582226eb2f5e4bc1c
ToppCellfacs-Brain_Non-Myeloid-Cortex-24m-Neuronal-nan|Brain_Non-Myeloid / Brain_Non-Myeloid_Brain_Myeloid - method, tissue, subtissue, age, lineage, cell ontology and free annotation

CDR1 TSPOAP1 SRRM3 KCNH3

7.56e-051935240c652ebe22ce5d2927599dd97ef1920547858395
ToppCellfacs-Brain_Non-Myeloid-Cortex-24m-Neuronal-neuron|Brain_Non-Myeloid / Brain_Non-Myeloid_Brain_Myeloid - method, tissue, subtissue, age, lineage, cell ontology and free annotation

CDR1 TSPOAP1 SRRM3 KCNH3

7.56e-051935248689a70a33a7c3823dc647d41ac0160e7c3ae396
ToppCelldroplet-Marrow-nan-3m-Myeloid-granulocytopoietic_cell|Marrow / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation

FMR1 PRRC2C SCAF11 THRAP3

7.72e-051945248ef0b71fef5b84cfd04973f891215333e7035d1d
ToppCellEnterocyte_Progenitors|World / shred on cell type and cluster

ILF3 RPS2 PRRC2C SNRPD1

8.51e-05199524776bcc887927dea9ebd76ec4338ce2225c319c2c
ToppCellTransverse-T_cell-Th1|T_cell / Region, Cell class and subclass

MAP1A DEDD2 NFKBIE PTCH1

8.51e-051995249271d9d36ffe1c169049d4340258f366916adfaf
Diseaseobsolete aging, cognition

PRR20C PRR20D PRR20B PRR20E PRR20A

4.56e-1115535EFO_0003925, GO_0007568
Diseaset-tau:beta-amyloid 1-42 ratio measurement

PRR20C PRR20D PRR20B PRR20E PRR20A

1.27e-0766535EFO_0007708
Diseasemosaic loss of chromosome Y measurement

PRR20C PRR20D PRR20B PRR20E PRR20A

3.34e-0780535EFO_0007783
DiseaseTinnitus, wellbeing measurement

PRR20C PRR20D PRR20B PRR20E PRR20A

8.32e-0796535EFO_0007869, HP_0000360
Diseasetelomere length

PRR20C PRR20D PRR20B PRR20E PRR20A

2.46e-04313535EFO_0004505
Diseasedystonia (is_implicated_in)

KMT2B TSPOAP1

2.84e-0414532DOID:543 (is_implicated_in)
Diseaselung squamous cell carcinoma (is_implicated_in)

KMT2D PTCH1

8.52e-0424532DOID:3907 (is_implicated_in)
Diseasecongestive heart failure (is_implicated_in)

ADRA2C SRSF2

1.08e-0327532DOID:6000 (is_implicated_in)
Diseaseinternet addiction disorder

AVEN FMR1

1.61e-0333532EFO_0803368
DiseaseCleft upper lip

FGF2 PTCH1

2.25e-0339532C0008924
DiseaseCleft palate, isolated

FGF2 PTCH1

2.60e-0342532C1837218
Diseaseprostate cancer (is_marker_for)

KMT2D KMT2B PHLPP1

2.80e-03156533DOID:10283 (is_marker_for)
Diseaserheumatoid arthritis, anti-citrullinated protein antibody seropositivity, rheumatoid factor seropositivity measurement

KMT2B NFKBIE SCAF11

3.56e-03170533EFO_0000685, EFO_0007791, EFO_0007837

Protein segments in the cluster

PeptideGeneStartEntry
LRRGGRRRAGAEGGA

ADRA2C

301

P18825
GRRRRPGPSGPGGRR

BHLHA15

56

Q7RTS1
IRGRRGGRGRPRGQP

ACAP1

526

Q15027
RGRPSGGARRRRRGA

DEDD2

161

Q8WXF8
RCGLTGRPGFGGRRR

CDR1

211

P51861
ARRGGRRRGPGPARE

CDAN1

116

Q8IWY9
RRRGPGPARERGGRG

CDAN1

121

Q8IWY9
GSGSGGRRRRARRPK

ABHD8

141

Q96I13
GRGRLGPSRRCSRGR

TSPOAP1

1466

O95153
RPRLGGRGRPGRAGA

KCNH3

776

Q9ULD8
SFRGRGRGRGRGRGR

LARP1

336

Q6PKG0
VRLVGRGGRRRVGGP

MAP1A

2471

P78559
QQPGSRRGGGRRRGR

HHIPL1

646

Q96JK4
ARRGRGGGGAIRVRR

NFKBIE

36

O00221
ARGGTRGGRGRIRRA

HABP4

371

Q5JVS0
GPRVQRGRGRGRGRG

KMT2B

86

Q9UMN6
APRLRGRGGTGGARR

NAGS

16

Q8N159
GRGRGKRRFGPGRRP

PRDM10

391

Q9NQV6
RGGRGGARGERRGGR

INO80B

251

Q9C086
PAERGRRRGGSRRPG

PRR20D

71

P86480
RRRGGSRRPGRGRGR

PRR20D

76

P86480
SRRPGRGRGRRAGPR

PRR20D

81

P86480
PAERGRRRGGSRRPG

PRR20A

71

P86496
RRRGGSRRPGRGRGR

PRR20A

76

P86496
SRRPGRGRGRRAGPR

PRR20A

81

P86496
PAERGRRRGGSRRPG

PRR20B

71

P86481
RRRGGSRRPGRGRGR

PRR20B

76

P86481
SRRPGRGRGRRAGPR

PRR20B

81

P86481
RGRGRGRGRGRGRGR

MBD2

76

Q9UBB5
GRGRGRGRGRGRGRG

MBD2

81

Q9UBB5
RGRGRGRGRGRPPSG

MBD2

86

Q9UBB5
LRRGDGRRRGGGGRG

FMR1

526

Q06787
APRGRSSSRGRGRGR

GIGYF2

116

Q6Y7W6
GARGGRGRRPGRGRP

AVEN

6

Q9NQS1
RGRRPGRGRPGGDRH

AVEN

11

Q9NQS1
DGGGRRGRGRGRGFR

AVEN

46

Q9NQS1
RGRGRGRGFRGARGG

AVEN

51

Q9NQS1
GRGLLTRRPGTRRGG

FOXRED1

11

Q96CU9
GRGRGGSIRGRGRGR

ILF3

641

Q12906
GRLGGRGRGRAPERV

FGF2

91

P09038
RGRGRAPERVGGRGR

FGF2

96

P09038
RGRGRGNRGRGTYRS

SCAF11

1071

Q99590
GSFRGRGRGRGRGRG

LARP1B

146

Q659C4
RGRGRGRGRGRGRGN

LARP1B

151

Q659C4
GGGGYGRRSRSPRRR

SRSF2

111

Q01130
GGRAAGGAGRRRRRR

SRRM3

376

A6NNA2
PAERGRRRGGSRRPG

PRR20C

71

P86479
RRRGGSRRPGRGRGR

PRR20C

76

P86479
SRRPGRGRGRRAGPR

PRR20C

81

P86479
RRGRGGTFRRGGRDP

PRRC2C

1341

Q9Y520
PAERGRRRGGSRRPG

PRR20E

71

P86478
RRRGGSRRPGRGRGR

PRR20E

76

P86478
SRRPGRGRGRRAGPR

PRR20E

81

P86478
IGAPGRPAGGGRRRR

PTCH1

21

Q13635
RPAGGGRRRRTGGLR

PTCH1

26

Q13635
SRGRPRFLRGTRGGG

RBMXL2

101

O75526
RVPRGGGRLGGRLER

RBMXL2

371

O75526
GRGRGRGRGALARPV

CHTOP

196

Q9Y3Y2
GPGRRQGRGRGRARR

TOP3B

826

O95985
RGRGFGRGRGRGAGR

UBAP2

171

Q5T6F2
SRGRGRGAFPRGRGR

THRAP3

896

Q9Y2W1
SRRRGGPPRRGRGAS

UBAP2L

131

Q14157
SGRGTERGRRGRGRG

UBAP2L

166

Q14157
ERGRRGRGRGRGGSG

UBAP2L

171

Q14157
RGGVRGGARGASRVR

SPRN

36

Q5BIV9
GRPKGRGRGRPRGRP

ZHX1

746

Q9UKY1
RGRGRPRGRPRGSKR

ZHX1

751

Q9UKY1
AGRGRGRGRGRGRGR

SNRPD1

96

P62314
GRGRGRGRGRGRGRG

SNRPD1

101

P62314
RGRGRRGRPPSRTTG

TP53BP1

1396

Q12888
GGGGRRNATGRGRRR

nan

96

Q8N1X5
RGRGSRGRGRGYRGR

ZC3H4

236

Q9UPT8
RGRGRGYRGRGSRGG

ZC3H4

241

Q9UPT8
GRGLSRGRGRGSRGR

ZC3H4

321

Q9UPT8
GGRPGATGRRRRRLR

ZNRF3

6

Q9ULT6
GPLPGRAGGAGRRRR

PHLPP1

81

O60346
RAGGAGRRRRRGAPQ

PHLPP1

86

O60346
RDLRGRGRGTPRGGR

WDR33

1146

Q9C0J8
SGIRGRGRGRGRGRG

RPS2

31

P15880
RGRGRGRGRGRGRGA

RPS2

36

P15880
RGRGRGRGRGRGRGR

ZNF579

16

Q8NAF0
GRGRGRGRGRGRGRG

ZNF579

21

Q8NAF0
SERPGGRRRGRRTGS

AVPR2

241

P30518
RRGTRGGARGRGRGA

ALYREF

216

Q86V81
RRRPRGGAHGGRGRG

KMT2D

1311

O14686