Cluster composition

Functions

Category	Name	IntersectionWithQuery	PValue	GenesInTerm	GenesInQuery	GenesInTermInQuery	ID
Domain	SMARCC_C	SMARCC1 SMARCC2	1.59e-05	2	75	2	IPR032451
Domain	SMARCC_N	SMARCC1 SMARCC2	1.59e-05	2	75	2	IPR032450
Domain	SWIRM-assoc	SMARCC1 SMARCC2	1.59e-05	2	75	2	IPR032448
Domain	SWIRM-assoc_2	SMARCC1 SMARCC2	1.59e-05	2	75	2	PF16496
Domain	SWIRM-assoc_1	SMARCC1 SMARCC2	1.59e-05	2	75	2	PF16495
Domain	SWIRM-assoc_3	SMARCC1 SMARCC2	1.59e-05	2	75	2	PF16498
Domain	mTERF	MTERF1 MTERF3	9.50e-05	4	75	2	PF02536
Domain	Mterf	MTERF1 MTERF3	9.50e-05	4	75	2	SM00733
Domain	MTERF	MTERF1 MTERF3	9.50e-05	4	75	2	IPR003690
Domain	SWIRM	SMARCC1 SMARCC2	2.36e-04	6	75	2	PS50934
Domain	SWIRM	SMARCC1 SMARCC2	2.36e-04	6	75	2	PF04433
Domain	SWIRM	SMARCC1 SMARCC2	2.36e-04	6	75	2	IPR007526
Domain	Chromo/shadow_dom	CDYL2 SMARCC1 SMARCC2	3.11e-04	33	75	3	IPR000953
Domain	CHROMO	CDYL2 SMARCC1 SMARCC2	3.11e-04	33	75	3	SM00298
Domain	-	HOXD8 SMARCC1 SMARCC2 RABGAP1 BARX1 MEIS1	9.63e-04	283	75	6	1.10.10.60
Domain	TBC	TBC1D8 RABGAP1 TBC1D8B	1.00e-03	49	75	3	SM00164
Domain	RabGAP-TBC	TBC1D8 RABGAP1 TBC1D8B	1.26e-03	53	75	3	PF00566
Domain	TBC_RABGAP	TBC1D8 RABGAP1 TBC1D8B	1.40e-03	55	75	3	PS50086
Domain	Rab-GTPase-TBC_dom	TBC1D8 RABGAP1 TBC1D8B	1.40e-03	55	75	3	IPR000195
Domain	GRAM	TBC1D8 TBC1D8B	1.84e-03	16	75	2	SM00568
Domain	Homeodomain-like	HOXD8 SMARCC1 SMARCC2 RABGAP1 BARX1 MEIS1	2.17e-03	332	75	6	IPR009057
Domain	-	SACS MORC2	2.88e-03	20	75	2	3.30.565.10
Domain	HATPase_C	SACS MORC2	3.18e-03	21	75	2	IPR003594
Domain	GRAM	TBC1D8 TBC1D8B	3.49e-03	22	75	2	PF02893
Domain	GRAM	TBC1D8 TBC1D8B	3.49e-03	22	75	2	IPR004182
Domain	ARM-like	MRO RRP12 ARFGEF2 PPP4R1L PPP4R3A	4.61e-03	270	75	5	IPR011989
Domain	FERM_C	PTPN13 RDX	4.86e-03	26	75	2	PF09380
Domain	SANT_dom	SMARCC1 SMARCC2	4.86e-03	26	75	2	IPR017884
Domain	FERM_C	PTPN13 RDX	5.23e-03	27	75	2	SM01196
Domain	FERM_PH-like_C	PTPN13 RDX	5.23e-03	27	75	2	IPR018980
Domain	SANT	SMARCC1 SMARCC2	5.62e-03	28	75	2	PS51293
Domain	BRCT_dom	SMARCC1 SMARCC2	5.62e-03	28	75	2	IPR001357
Domain	Ubiquitin-rel_dom	PTPN13 SACS RASSF1 RDX	6.43e-03	184	75	4	IPR029071
Domain	FERM_N	PTPN13 RDX	7.75e-03	33	75	2	PF09379
Domain	FERM_N	PTPN13 RDX	7.75e-03	33	75	2	IPR018979
Pubmed	Unbiased Identification of trans Regulators of ADAR and A-to-I RNA Editing.	GTF2E2 GTF2I MTERF1 SLC25A10 SF3A3 SMARCC1 SMARCC2 XRCC6	1.62e-07	271	77	8	32433965
Pubmed	HDLBP Promotes Hepatocellular Carcinoma Proliferation and Sorafenib Resistance by Suppressing Trim71-dependent RAF1 Degradation.	GTF2E2 IGF2BP2 GTF2I ACADSB OTUD4 SMARCC1 SMARCC2 RDX MORC2 TBC1D8B CNOT1 DPM1 XRCC6 MOV10 DUSP11	2.83e-07	1371	77	15	36244648
Pubmed	Poly(ADP-ribosyl)ation of BRD7 by PARP1 confers resistance to DNA-damaging chemotherapeutic agents.	GTF2E2 IGF2BP2 RRP12 SLC25A10 SMARCC1 SMARCC2 DPM1 XRCC6 MOV10	1.31e-06	486	77	9	30940648
Pubmed	The mRNA-bound proteome and its global occupancy profile on protein-coding transcripts.	IGF2BP2 MTERF1 RRP12 FASTKD1 SF3A3 OTUD4 RP9 CNOT1 XRCC6 MOV10 DUSP11	1.63e-06	807	77	11	22681889
Pubmed	Human transcription factor protein interaction networks.	SETDB1 IGF2BP2 GTF2I RRP12 SLC25A10 OTUD4 SMARCC1 SMARCC2 MORC2 ZNHIT1 CNOT1 DPM1 XRCC6 MOV10	2.73e-06	1429	77	14	35140242
Pubmed	Analysis of the Histone H3.1 Interactome: A Suitable Chaperone for the Right Event.	GTF2I SF3A3 OTUD4 SMARCC1 SMARCC2 XRCC6	3.29e-06	182	77	6	26527279
Pubmed	The Swi3 protein plays a unique role in regulating respiration in eukaryotes.	SMARCC1 SMARCC2	4.84e-06	2	77	2	27190130
Pubmed	Heterozygous deletion of the Williams-Beuren syndrome critical interval in mice recapitulates most features of the human disorder.	FKBP6 GTF2I	4.84e-06	2	77	2	25027326
Pubmed	Oct4 links multiple epigenetic pathways to the pluripotency network.	GTF2I SF3A3 SMARCC1 SMARCC2 CNOT1 NEDD4	6.17e-06	203	77	6	22083510
Pubmed	Large-scale characterization of HeLa cell nuclear phosphoproteins.	GTF2I ERCC6L RRP12 ARFGEF2 OTUD4 SMARCC1 SMARCC2 MORC2 XRCC6 PPP4R3A	8.05e-06	774	77	10	15302935
Pubmed	TRIM28 interacts with EZH2 and SWI/SNF to activate genes that promote mammosphere formation.	GTF2I SMARCC1 SMARCC2	8.31e-06	18	77	3	28068325
Pubmed	A systems-wide screen identifies substrates of the SCFβTrCP ubiquitin ligase.	PTPN13 GTF2I ERCC6L MTERF3 MOV10 DUSP11	1.32e-05	232	77	6	25515538
Pubmed	A CRISPR knockout screen identifies SETDB1-target retroelement silencing factors in embryonic stem cells.	SETDB1 MORC2	1.45e-05	3	77	2	29728365
Pubmed	BAF chromatin remodeling complex: cortical size regulation and beyond.	SMARCC1 SMARCC2	1.45e-05	3	77	2	23974113
Pubmed	Two-Dimensional Fractionation Method for Proteome-Wide Cross-Linking Mass Spectrometry Analysis.	ATP5PF GTF2I SF3A3 SMARCC1 SMARCC2 RDX RABGAP1 XRCC6 PPP4R3A NEDD4	1.75e-05	847	77	10	35235311
Pubmed	WW domains provide a platform for the assembly of multiprotein networks.	SF3A3 SMARCC1 SMARCC2 XRCC6 NEDD4	2.44e-05	154	77	5	16055720
Pubmed	Large-scale mapping of human protein-protein interactions by mass spectrometry.	IGF2BP2 GTF2I ERCC6L GLRX3 RRP12 SF3A3 OTUD4 SMARCC1 CNOT1 DPM1 MOV10 PPP4R3A	2.44e-05	1284	77	12	17353931
Pubmed	Systematic analysis of the protein interaction network for the human transcription machinery reveals the identity of the 7SK capping enzyme.	GTF2E2 IGF2BP2 GTF2I SMARCC1 SMARCC2 CNOT1 MOV10	2.59e-05	390	77	7	17643375
Pubmed	Molecular mechanism of synovial joint site specification and induction in developing vertebrate limbs.	BARX1 MEIS1	2.89e-05	4	77	2	37272420
Pubmed	Spontaneous activity of opsin apoprotein is a cause of Leber congenital amaurosis.	CYP7A1 RPE65	2.89e-05	4	77	2	14517541
Pubmed	The tumor suppressor hSNF5/INI1 modulates cell growth and actin cytoskeleton organization.	SMARCC1 SMARCC2	2.89e-05	4	77	2	15150092
Pubmed	Transcription factor protein interactomes reveal genetic determinants in heart disease.	IGF2BP2 GTF2I SF3A3 SMARCC1 SMARCC2 MEIS1 XRCC6	3.61e-05	411	77	7	35182466
Pubmed	Placing the HIRA histone chaperone complex in the chromatin landscape.	GTF2I SMARCC1 SMARCC2	4.49e-05	31	77	3	23602572
Pubmed	The Tumor Suppressor CIC Directly Regulates MAPK Pathway Genes via Histone Deacetylation.	GTF2I SLC25A10 SF3A3 OTUD4 SMARCC1 MORC2 DPM1 XRCC6	4.53e-05	583	77	8	29844126
Pubmed	Systematic analysis of human protein complexes identifies chromosome segregation proteins.	GTF2I ERCC6L RASSF1 RRP12 SF3A3 CCDC15 SMARCC1 SMARCC2 CNOT1 XRCC6 MOV10	4.65e-05	1155	77	11	20360068
Pubmed	Five SWI/SNF-related, matrix-associated, actin-dependent regulator of chromatin (SMARC) genes are dispersed in the human genome.	SMARCC1 SMARCC2	4.82e-05	5	77	2	9693044
Pubmed	Regulating SWI/SNF subunit levels via protein-protein interactions and proteasomal degradation: BAF155 and BAF170 limit expression of BAF57.	SMARCC1 SMARCC2	4.82e-05	5	77	2	16199878
Pubmed	Chromatin-remodelling factor BRG1 selectively activates a subset of interferon-alpha-inducible genes.	SMARCC1 SMARCC2	4.82e-05	5	77	2	12244326
Pubmed	Members of the hSWI/SNF chromatin remodeling complex associate with and are phosphorylated by protein kinase B/Akt.	SMARCC1 SMARCC2	4.82e-05	5	77	2	16568092
Pubmed	The HSA domain of BRG1 mediates critical interactions required for glucocorticoid receptor-dependent transcriptional activation in vivo.	SMARCC1 SMARCC2	4.82e-05	5	77	2	18086889
Pubmed	p300/CREB binding protein-related protein p270 is a component of mammalian SWI/SNF complexes.	SMARCC1 SMARCC2	4.82e-05	5	77	2	9584200
Pubmed	Enhancer Activity Requires CBP/P300 Bromodomain-Dependent Histone H3K27 Acetylation.	GTF2I GLRX3 SF3A3 SMARCC1 SMARCC2	5.13e-05	180	77	5	30110629
Pubmed	Reciprocal interaction between SIRT6 and APC/C regulates genomic stability.	SETDB1 GTF2I RRP12 SMARCC1 SMARCC2 MOV10 PPP4R3A	5.55e-05	440	77	7	34244565
Pubmed	Variations in the composition of mammalian SWI/SNF chromatin remodelling complexes.	SMARCC1 SMARCC2	7.22e-05	6	77	2	19650111
Pubmed	Testing for association between MeCP2 and the brahma-associated SWI/SNF chromatin-remodeling complex.	SMARCC1 SMARCC2	7.22e-05	6	77	2	16940996
Pubmed	Jmjd3 and UTX play a demethylase-independent role in chromatin remodeling to regulate T-box family member-dependent gene expression.	SMARCC1 SMARCC2	7.22e-05	6	77	2	21095589
Pubmed	The p270 (ARID1A/SMARCF1) subunit of mammalian SWI/SNF-related complexes is essential for normal cell cycle arrest.	SMARCC1 SMARCC2	7.22e-05	6	77	2	16230384
Pubmed	BRCA1 is associated with a human SWI/SNF-related complex: linking chromatin remodeling to breast cancer.	SMARCC1 SMARCC2	7.22e-05	6	77	2	10943845
Pubmed	Common variants of HMGCR, CETP, APOAI, ABCB1, CYP3A4, and CYP7A1 genes as predictors of lipid-lowering response to atorvastatin therapy.	CYP3A4 CYP7A1	7.22e-05	6	77	2	20578904
Pubmed	Varying modulation of HIV-1 LTR activity by Baf complexes.	SMARCC1 SMARCC2	7.22e-05	6	77	2	21699904
Pubmed	A protein-interaction network of interferon-stimulated genes extends the innate immune system landscape.	ATP5PF IGF2BP2 GTF2I ACADSB GLRX3 RRP12 SF3A3 DDX60L CNOT1 DPM1 XRCC6 MOV10	7.38e-05	1440	77	12	30833792
Pubmed	Identifications of novel host cell factors that interact with the receptor-binding domain of the SARS-CoV-2 spike protein.	MCM8 ERCC6L SLC25A10 SMARCC1 RDX MORC2 MAP3K6 DPM1	9.66e-05	650	77	8	38777146
Pubmed	Transferrin Receptor Protein 1 Cooperates with mGluR2 To Mediate the Internalization of Rabies Virus and SARS-CoV-2.	RRP12 SLC25A10 SMARCC1 SMARCC2 DPM1 MOV10	9.86e-05	333	77	6	36779763
Pubmed	A functional peptidyl-tRNA hydrolase, ICT1, has been recruited into the human mitochondrial ribosome.	IGF2BP2 MTERF1 MTERF3 SLC25A10 MOV10	9.93e-05	207	77	5	20186120
Pubmed	Functional proteomics establishes the interaction of SIRT7 with chromatin remodeling complexes and expands its role in regulation of RNA polymerase I transcription.	IGF2BP2 GTF2I RRP12 SMARCC1 SMARCC2 CNOT1 XRCC6 MOV10	9.97e-05	653	77	8	22586326
Pubmed	Requirement for SWI/SNF chromatin-remodeling complex in Tat-mediated activation of the HIV-1 promoter.	SMARCC1 SMARCC2	1.01e-04	7	77	2	16601680
Pubmed	BRIT1/MCPH1 links chromatin remodelling to DNA damage response.	SMARCC1 SMARCC2	1.01e-04	7	77	2	19525936
Pubmed	Chromatin-remodeling factor SMARCD2 regulates transcriptional networks controlling differentiation of neutrophil granulocytes.	SMARCC1 SMARCC2	1.01e-04	7	77	2	28369036
Pubmed	Target genes of the largest human SWI/SNF complex subunit control cell growth.	SMARCC1 SMARCC2	1.01e-04	7	77	2	21118156
Pubmed	Systematic proteomics of the VCP-UBXD adaptor network identifies a role for UBXN10 in regulating ciliogenesis.	SETDB1 ACADSB SLC25A10 RDX PPP4R3A	1.04e-04	209	77	5	26389662
Pubmed	Large-scale identification of c-MYC-associated proteins using a combined TAP/MudPIT approach.	IGF2BP2 GTF2I SMARCC1 DPM1 XRCC6	1.09e-04	211	77	5	17314511
Pubmed	Tumor-derived neomorphic mutations in ASXL1 impairs the BAP1-ASXL1-FOXK1/K2 transcription network.	SLC25A10 SF3A3 DPM1 XRCC6	1.11e-04	111	77	4	32683582
Pubmed	CHK2-BRCA1 tumor-suppressor axis restrains oncogenic Aurora-A kinase to ensure proper mitotic microtubule assembly.	SF3A3 ARFGEF2 SMARCC1 SMARCC2 CNOT1 XRCC6 MOV10	1.14e-04	494	77	7	26831064
Pubmed	Proteomic analyses reveal distinct chromatin-associated and soluble transcription factor complexes.	MTERF1 SF3A3 CCDC15 SMARCC1 SMARCC2 MORC2 BARX1 MEIS1 MOV10	1.16e-04	857	77	9	25609649
Pubmed	Identification and characterization of a novel Tre-2/Bub2/Cdc16 (TBC) protein that possesses Rab3A-GAP activity.	TBC1D8 RABGAP1 TBC1D8B	1.21e-04	43	77	3	19077034
Pubmed	PTPN14 regulates Roquin2 stability by tyrosine dephosphorylation.	IGF2BP2 RRP12 OTUD4 SMARCC1 CNOT1 DPM1 XRCC6 MOV10	1.29e-04	678	77	8	30209976
Pubmed	Biochemical Reduction of the Topology of the Diverse WDR76 Protein Interactome.	GTF2I RRP12 SMARCC2 RDX XRCC6	1.29e-04	219	77	5	31353912
Pubmed	CHD7 cooperates with PBAF to control multipotent neural crest formation.	SMARCC1 SMARCC2	1.34e-04	8	77	2	20130577
Pubmed	The assembly of mammalian SWI/SNF chromatin remodeling complexes is regulated by lysine-methylation dependent proteolysis.	SMARCC1 SMARCC2	1.34e-04	8	77	2	36335117
Pubmed	Epigenetic regulation by BAF (mSWI/SNF) chromatin remodeling complexes is indispensable for embryonic development.	SMARCC1 SMARCC2	1.34e-04	8	77	2	26986003
Pubmed	The epigenetic modifier PBRM1 restricts the basal activity of the innate immune system by repressing retinoic acid-inducible gene-I-like receptor signalling and is a potential prognostic biomarker for colon cancer.	SMARCC1 SMARCC2	1.34e-04	8	77	2	28940253
Pubmed	HPD degradation regulated by the TTC36-STK33-PELI1 signaling axis induces tyrosinemia and neurological damage.	GTF2I ARFGEF2	1.34e-04	8	77	2	31537781
Pubmed	Critical role of the BAF chromatin remodeling complex during murine neural crest development.	SMARCC1 SMARCC2	1.34e-04	8	77	2	33750945
Pubmed	MECP2 directly interacts with RNA polymerase II to modulate transcription in human neurons.	IGF2BP2 PTPN13 SACS RRP12 SLC25A10 SF3A3 SMARCC1 SMARCC2 CNOT1 XRCC6	1.35e-04	1082	77	10	38697112
Pubmed	Interaction of LATS1 with SMAC links the MST2/Hippo pathway with apoptosis in an IAP-dependent manner.	RASSF1 SLC25A10 OTUD4 SMARCC1 DPM1	1.38e-04	222	77	5	35941108
Pubmed	Roquin promotes constitutive mRNA decay via a conserved class of stem-loop recognition motifs.	IGF2BP2 CNOT1 MOV10	1.38e-04	45	77	3	23663784
Pubmed	C16orf72/HAPSTR1 is a molecular rheostat in an integrated network of stress response pathways.	GTF2I SF3A3 OTUD4 XRCC6	1.45e-04	119	77	4	35776542
Pubmed	BAP1 regulation of the key adaptor protein NCoR1 is critical for γ-globin gene repression.	IGF2BP2 GTF2I RRP12 SLC25A10 SF3A3 SMARCC1 RDX RP9 DPM1 XRCC6 MOV10	1.50e-04	1318	77	11	30463901
Pubmed	Mammalian SWI/SNF--a subunit BAF250/ARID1 is an E3 ubiquitin ligase that targets histone H2B.	SMARCC1 SMARCC2	1.72e-04	9	77	2	20086098
Pubmed	The BAF chromatin complex component SMARCC1 does not mediate GLI transcriptional repression of Hedgehog target genes in limb buds.	SMARCC1 SMARCC2	1.72e-04	9	77	2	37805104
Pubmed	EYA1 and SIX1 drive the neuronal developmental program in cooperation with the SWI/SNF chromatin-remodeling complex and SOX2 in the mammalian inner ear.	SMARCC1 SMARCC2	1.72e-04	9	77	2	22513373
Pubmed	Rapid and phosphoinositol-dependent binding of the SWI/SNF-like BAF complex to chromatin after T lymphocyte receptor signaling.	SMARCC1 SMARCC2	1.72e-04	9	77	2	9845365
Pubmed	BioID-based intact cell interactome of the Kv1.3 potassium channel identifies a Kv1.3-STAT3-p53 cellular signaling pathway.	TBC1D8 PTPN13 ERCC6L GLRX3 RDX CNOT1 DPM1 XRCC6	1.73e-04	708	77	8	39231216
Pubmed	TNIP2 is a Hub Protein in the NF-κB Network with Both Protein and RNA Mediated Interactions.	ATP5PF IGF2BP2 PTPN13 GTF2I MTERF3 SMARCC1 DPM1 XRCC6 MOV10	2.00e-04	922	77	9	27609421
Pubmed	Proteome-wide identification of HSP70/HSC70 chaperone clients in human cells.	SETDB1 IGF2BP2 NTM RRP12 SLC25A10 SF3A3 SMARCC1 CP RABGAP1 CNOT1 XRCC6	2.05e-04	1367	77	11	32687490
Pubmed	Hematopoiesis controlled by distinct TIF1gamma and Smad4 branches of the TGFbeta pathway.	SMARCC1 SMARCC2	2.15e-04	10	77	2	16751102
Pubmed	Novel SWI/SNF chromatin-remodeling complexes contain a mixed-lineage leukemia chromosomal translocation partner.	SMARCC1 SMARCC2	2.15e-04	10	77	2	12665591
Pubmed	Purification and characterization of mSin3A-containing Brg1 and hBrm chromatin remodeling complexes.	SMARCC1 SMARCC2	2.15e-04	10	77	2	11238380
Pubmed	A methylation-mediator complex in hormone signaling.	SMARCC1 SMARCC2	2.15e-04	10	77	2	14729568
Pubmed	Common sequence variants in pharmacodynamic and pharmacokinetic pathway-related genes conferring LDL cholesterol response to statins.	CYP3A4 CYP7A1	2.15e-04	10	77	2	20235787
Pubmed	Chromatin Remodelers Interact with Eya1 and Six2 to Target Enhancers to Control Nephron Progenitor Cell Maintenance.	SMARCC1 SMARCC2	2.15e-04	10	77	2	34716243
Pubmed	Liver maturation deficiency in p57(Kip2)-/- mice occurs in a hepatocytic p57(Kip2) expression-independent manner.	CYP3A4 CYP7A1	2.15e-04	10	77	2	26165599
Pubmed	Tumor suppressor BAP1 nuclear import is governed by transportin-1.	IGF2BP2 GTF2I GLRX3 RRP12 SF3A3 OTUD4 RDX CNOT1 XRCC6 MOV10	2.20e-04	1149	77	10	35446349
Pubmed	N-Terminal Acetyltransferase Naa40p Whereabouts Put into N-Terminal Proteoform Perspective.	GTF2E2 IGF2BP2 PTPN13 GTF2I ERCC6L RRP12 RDX XRCC6 PPP4R3A	2.20e-04	934	77	9	33916271
Pubmed	Human Regulatory Protein Ki-1/57 Is a Target of SUMOylation and Affects PML Nuclear Body Formation.	RRP12 RDX MORC2 MOV10	2.29e-04	134	77	4	28695742
Pubmed	The SWI/SNF chromatin remodeling factor DPF3 regulates metastasis of ccRCC by modulating TGF-β signaling.	SMARCC1 SMARCC2 RDX	2.52e-04	55	77	3	35945219
Pubmed	Functional selectivity of recombinant mammalian SWI/SNF subunits.	SMARCC1 SMARCC2	2.63e-04	11	77	2	11018012
Pubmed	BAF60a mediates critical interactions between nuclear receptors and the BRG1 chromatin-remodeling complex for transactivation.	SMARCC1 SMARCC2	2.63e-04	11	77	2	12917342
Pubmed	Genome-wide impact of the BRG1 SWI/SNF chromatin remodeler on the transforming growth factor beta transcriptional program.	SMARCC1 SMARCC2	2.63e-04	11	77	2	18003620
Pubmed	Genome-wide association study identifies a novel locus contributing to type 2 diabetes susceptibility in Sikhs of Punjabi origin from India.	IGF2BP2 SACS	2.63e-04	11	77	2	23300278
Pubmed	Assembly of the U5 snRNP component PRPF8 is controlled by the HSP90/R2TP chaperones.	GTF2E2 GTF2I GLRX3 RRP12 SLC25A10 SF3A3 SMARCC1 SMARCC2 RDX DPM1 XRCC6	2.76e-04	1415	77	11	28515276
Pubmed	Prediction of the coding sequences of mouse homologues of KIAA gene: II. The complete nucleotide sequences of 400 mouse KIAA-homologous cDNAs identified by screening of terminal sequences of cDNA clones randomly sampled from size-fractionated libraries.	SETDB1 RRP12 RAP1GAP2 OTUD4 EPM2AIP1 NEDD4	2.91e-04	407	77	6	12693553
Pubmed	The USP10-HDAC6 axis confers cisplatin resistance in non-small cell lung cancer lacking wild-type p53.	IGF2BP2 OTUD4 XRCC6	3.10e-04	59	77	3	32382008
Pubmed	Proteomics of herpes simplex virus replication compartments: association of cellular DNA replication, repair, recombination, and chromatin remodeling proteins with ICP8.	SMARCC1 XRCC6	3.15e-04	12	77	2	15140983
Pubmed	Conditional Loss of BAF (mSWI/SNF) Scaffolding Subunits Affects Specification and Proliferation of Oligodendrocyte Precursors in Developing Mouse Forebrain.	SMARCC1 SMARCC2	3.15e-04	12	77	2	34336815
Pubmed	SYT associates with human SNF/SWI complexes and the C-terminal region of its fusion partner SSX1 targets histones.	SMARCC1 SMARCC2	3.15e-04	12	77	2	11734557
Pubmed	Chromatin remodelers and lineage-specific factors interact to target enhancers to establish proneurosensory fate within otic ectoderm.	SMARCC1 SMARCC2	3.15e-04	12	77	2	33723076
Pubmed	Cold-inducible RBM3 inhibits PERK phosphorylation through cooperation with NF90 to protect cells from endoplasmic reticulum stress.	IGF2BP2 DDX60L MOV10	3.26e-04	60	77	3	26472337
Pubmed	Irisin Mediates Effects on Bone and Fat via αV Integrin Receptors.	IGF2BP2 FASTKD1 SLC25A10 SF3A3 SMARCC1 SMARCC2 CP DPM1 PPP4R3A SLC27A3 NEDD4	3.42e-04	1451	77	11	30550785
Pubmed	ZMYM3 regulates BRCA1 localization at damaged chromatin to promote DNA repair.	GTF2I SMARCC1 SMARCC2 ZNHIT1	3.52e-04	150	77	4	28242625
GeneFamily	WD repeat domain containing\|GRAM domain containing\|BEACH domain containing	TBC1D8 TBC1D8B	6.69e-04	13	54	2	1146
Coexpression	MIKKELSEN_ES_HCP_WITH_H3K27ME3	PCDHB18P HOXD8 NTM PCDHB7	6.42e-06	41	77	4	M2000
Coexpression	MIKKELSEN_ES_HCP_WITH_H3K27ME3	PCDHB18P HOXD8 NTM PCDHB7	7.08e-06	42	77	4	MM1275
Coexpression	GSE17974_2.5H_VS_72H_IL4_AND_ANTI_IL12_ACT_CD4_TCELL_UP	ZSCAN32 SACS RRP12 ARFGEF2 OTUD4 DUSP11	2.62e-05	198	77	6	M4249
CoexpressionAtlas	dev gonad_e13.5_F_MeioticGermCell_Oct_k-means-cluster#2_top-relative-expression-ranked_1000	SETDB1 RBM44 GTF2E2 FKBP6 MCM8 ARFGEF2 OTUD4 XRCC6	4.45e-05	361	76	8	gudmap_dev gonad_e13.5_F_MeioticGermCell_Oct_k2_1000
CoexpressionAtlas	dev gonad_e12.5_M_GermCellTestis_Oct_k-means-cluster#2_top-relative-expression-ranked_1000	RBM44 GTF2E2 FKBP6 MCM8 ERCC6L OTUD4 XRCC6	4.68e-05	266	76	7	gudmap_dev gonad_e12.5_M_GermCellTestis_Oct_k2_1000
Disease	nephrotic syndrome type 20 (implicated_via_orthology)	TBC1D8 TBC1D8B	3.71e-05	4	74	2	DOID:0070357 (implicated_via_orthology)
Disease	Williams Syndrome	FKBP6 GTF2I	1.72e-04	8	74	2	C0175702
Disease	basal cell carcinoma (is_marker_for)	RPE65 XRCC6	1.72e-04	8	74	2	DOID:2513 (is_marker_for)
Disease	opportunistic bacterial infectious disease (implicated_via_orthology)	SMARCC1 SMARCC2	2.21e-04	9	74	2	DOID:0050340 (implicated_via_orthology)
Disease	Coffin-Siris syndrome (implicated_via_orthology)	SMARCC1 SMARCC2	2.21e-04	9	74	2	DOID:1925 (implicated_via_orthology)
Disease	glucose metabolism decline measurement, cingulate cortex measurement	TBC1D8 PPP4R3A	2.21e-04	9	74	2	EFO_0007738, EFO_0009392
Disease	isoleucine measurement	GLS2 NTM PISD	3.81e-04	56	74	3	EFO_0009793
Disease	squamous cell carcinoma (is_marker_for)	RPE65 XRCC6	1.03e-03	19	74	2	DOID:1749 (is_marker_for)
Disease	Retinal Degeneration	CP RPE65	1.26e-03	21	74	2	C0035304
Disease	blood rubidium measurement	ABCA13 ARFGEF2	1.94e-03	26	74	2	EFO_0021529
Disease	non-high density lipoprotein cholesterol measurement	TBC1D8 SCGB1D1 CYP7A1 RASSF1 ARFGEF2 ZNHIT1 MAP3K6	2.07e-03	713	74	7	EFO_0005689
Disease	age of onset of Alzheimer disease	FMN1 ARFGEF2	3.12e-03	33	74	2	OBA_2001000
Disease	C-reactive protein measurement	SCGB1D1 GTF2I GLS2 CYP3A4 NTM SMARCC2 MEIS1 PGM5 SLC27A3	3.14e-03	1206	74	9	EFO_0004458
Disease	viral load	CYP3A4 NTM RAP1GAP2	4.89e-03	136	74	3	EFO_0010125

Protein segments in the cluster

Peptide	Gene	Start	Entry
KDLKPIFEQFGRIFE	CELF3	21	Q5SZQ8
KGELANFRFQKDFLR	ARFGEF2	1171	Q9Y6D5
FVEFFEKLLLPNLFD	ABCA13	736	Q86UQ4
IKERIQFGKRLFDFQ	ACADSB	316	P45954
FVFLEQLRKNFGIKV	SLC25A10	271	Q9UBX3
KFIPEFIRKQKEGNF	DPM1	126	O60762
LKFQELFVEPFNRKA	NBEAL1	1736	Q6ZS30
KPNGNFLNKDFLELR	RBM44	551	Q6ZP01
DLPKDKNILRFFFNL	OTUD4	691	Q01804
KFLVVDDPRKFALFE	RASSF1	236	Q9NS23
LQPFKDKLEEFFQKA	FMN1	1296	Q68DA7
KSFLFEPVVKAFLNN	PPP4R3A	576	Q6IN85
FENPLQFFRAELLVK	PCDHB18P	56	Q96TA0
IAVFAKQIRAEKPLF	MEIS1	121	O00470
GRQEFDLENKFKPFR	PGM5	176	Q15124
LQFKFRAKFFPEDVS	RDX	76	P35241
KVFNPRRKLEFALLF	CP	906	P00450
FEGALKFFRVQLPKR	RABGAP1	776	Q9Y3P9
FKEGFFELIPQDLIK	NEDD4	1171	P46934
PLIEKIQAFEKFFTR	MCM8	91	Q9UJA3
RFQTLELEKEFLFNP	HOXD8	206	P13378
VENRPFLSKLIFFNV	NTM	271	Q9P121
PTFLFFKNSQKIDRL	GLRX3	86	O76003
VLKAEQAAVFKFPLA	BARX1	76	Q9HBU1
KLPAIFFLFKNDDVG	DDX60L	1106	Q5H9U9
DPFVENTKKLLRFDF	CYP3A4	201	P08684
FAFPDAVKQILRKRQ	MAP3K6	1081	O95382
FAVAPDFLKFFKNAL	KCNS2	246	Q9ULS6
QAFRKKFVIPDFEEF	GLS2	146	Q9UI32
QKREPLKNVFFILAE	MRO	41	Q9BYG7
RIFGKLKEENFFNPK	IGF2BP2	491	Q9Y6M1
NPFLFRQVLENFKLK	C17orf75	311	Q9HAS0
FDKRFFVPAEKIVIN	IL20RA	296	Q9UHF4
PNFEKFLIKSIAENR	METTL7A	101	Q9H8H3
KQRALKEPKELNFVF	MORC2	356	Q9Y6X9
KARDFLVRAQKEQPF	FKBP6	271	O75344
FQLLLEKPFQIFRAE	PCDHB7	106	Q9Y5E2
AFNKELDPIQKLFVD	ATP5PF	31	P18859
RFIAFKVPLQKSFEK	DUSP11	96	O75319
IKKDLELFSNPFNFK	EPM2AIP1	481	Q7L775
FPEDLLKAIFNIKFL	FASTKD1	626	Q53R41
EEFRQAFQKIVPFRK	HTR1D	361	P28221
FDEPLFKANFSIKIR	ERAP2	211	Q6P179
LDNFKQFDKVFPALV	CYP7A1	206	P22680
LKQAVKVPFALFESF	GTF2I	751	P78347
LFIPNDFFKKLEQLI	SACS	3556	Q9NZJ4
QEATEKFLIPKFFEL	PPP4R1L	196	Q9P1A2
FKLFNLAKDIFPNEK	ERCC6L	41	Q2NKX8
KNSIRFPLFNFEKGN	P2RX3	176	P56373
TQRKLRNFFGPEFVK	PTPN13	531	Q12923
FPQVFNTRLFKVKER	MTERF3	351	Q96E29
FVNRPDKKKILFFND	GTF2E2	191	P29084
VFVETPVKINLFKFL	RPE65	251	Q16518
PFLENFQSRFNKKRK	PWWP2A	711	Q96N64
PFFIKGNQKLEQFRV	RP9	121	Q8TA86
VFQKGPEFREFLLTK	RAP1GAP2	421	Q684P5
DLDFNLGFLKNPKRF	MOV10	891	Q9HCE1
EDRKFVNFILKPQLE	SIGIRR	176	Q6IA17
IERRALPEFFNGKNK	SMARCC1	466	Q92922
IERRALPEFFNGKNK	SMARCC2	441	Q8TAQ2
EVSRFAKNFLPILFN	RRP12	681	Q5JTH9
NVKNKLRFLIFFDDG	SETDB1	286	Q15047
VFKFQLAKFKAPLEA	SCGB1D1	41	O95968
FSRVQKVKFKNPLFV	CCDC15	296	Q0P6D6
RDFVKAFIQFKKPIV	CDYL2	336	Q8N8U2
LRGFAAQFIKQKLPD	CNOT1	141	A5YKK6
KALKVFNFVRDNGPL	NLRP9	316	Q7RTR0
GFQLVFLPFADDKRK	XRCC6	431	P12956
ERDFFIPCQKTLFKI	ZNF778	151	Q96MU6
LFPNRLGFEFKNEIK	ZSCAN32	406	Q9NX65
QFNAFFRLPKGESLK	TBC1D8B	286	Q0IIM8
KLLKDVFRPGDVFFN	SLC27A3	511	Q5K4L6
VLIFEAPKDFNFQLK	PISD	381	Q9UG56
KFEARFNFPEAEKLV	TBC1D8	146	O95759
QKRIEKRNFTNFPFL	ZBED8	416	Q8IZ13
ADFVRKIIFKNPFIL	MTERF1	231	Q99551
IVAFIPLSNKEFFKN	RXFP1	541	Q9HBX9
IFDQLFDIPKERKNA	SF3A3	166	Q12874
IPLIALFQKLRFQFF	nan	241	A6NJR5
FKLRFRKNFQALLEE	ZNHIT1	76	O43257