Cluster composition

Functions

Category	Name	IntersectionWithQuery	PValue	GenesInTerm	GenesInQuery	GenesInTermInQuery	ID
GeneOntologyMolecularFunction	RNA polymerase II transcription regulatory region sequence-specific DNA binding	BHLHE41 TBX19 FOXD4L4 HIVEP1 FOXL2 FOXD4L1 HOXD8 NFATC3 FOXD4L3 GLI1 SKOR2 HLF ZNF316 SP6 AHR ESX1 GBX2 POU3F1 CHD2 CHD7 FOXD4L6 EMX1 EMX2 EN1 OLIG2 GLIS1 MEIS2 FOXD4L5 FOXD4 CREB3L2 TBX2 ZNF646 TBX6	4.86e-15	1459	93	33	GO:0000977
GeneOntologyMolecularFunction	RNA polymerase II cis-regulatory region sequence-specific DNA binding	BHLHE41 TBX19 FOXD4L4 HIVEP1 FOXL2 FOXD4L1 NFATC3 FOXD4L3 GLI1 SKOR2 HLF ZNF316 SP6 AHR POU3F1 CHD2 CHD7 FOXD4L6 EMX1 EMX2 EN1 OLIG2 GLIS1 MEIS2 FOXD4L5 FOXD4 CREB3L2 TBX2 ZNF646 TBX6	2.36e-14	1244	93	30	GO:0000978
GeneOntologyMolecularFunction	cis-regulatory region sequence-specific DNA binding	BHLHE41 TBX19 FOXD4L4 HIVEP1 FOXL2 FOXD4L1 NFATC3 FOXD4L3 GLI1 SKOR2 HLF ZNF316 SP6 AHR POU3F1 CHD2 CHD7 FOXD4L6 EMX1 EMX2 EN1 OLIG2 GLIS1 MEIS2 FOXD4L5 FOXD4 CREB3L2 TBX2 ZNF646 TBX6	4.15e-14	1271	93	30	GO:0000987
GeneOntologyMolecularFunction	DNA-binding transcription factor activity, RNA polymerase II-specific	BHLHE41 TBX19 FOXD4L4 HIVEP1 FOXL2 FOXD4L1 HOXD8 NFATC3 FOXD4L3 GLI1 SKOR2 HLF ZNF316 SP6 AHR ESX1 GBX2 POU3F1 FOXD4L6 EMX1 EMX2 EN1 OLIG2 GLIS1 MEIS2 FOXD4L5 FOXD4 CREB3L2 TBX2 ZNF646 TBX6	9.60e-14	1412	93	31	GO:0000981
GeneOntologyMolecularFunction	transcription factor binding	BHLHE41 FOXL2 UBN1 NFATC3 TLE1 TLE4 MED25 AHR GBX2 CTBP1 JMJD1C MEIS2 TBX2 TBX6	9.78e-06	753	93	14	GO:0008134
GeneOntologyMolecularFunction	chromatin binding	ATXN1 NFATC3 GLI1 TLE1 TLE4 SKOR2 AUTS2 SMARCC2 CTBP1 CHD2 CHD7 RERE JMJD1C	3.73e-05	739	93	13	GO:0003682
GeneOntologyMolecularFunction	DNA-binding transcription factor binding	BHLHE41 FOXL2 TLE1 TLE4 MED25 AHR GBX2 CTBP1 JMJD1C TBX2 TBX6	8.23e-05	582	93	11	GO:0140297
GeneOntologyMolecularFunction	DNA-binding transcription repressor activity, RNA polymerase II-specific	BHLHE41 HIVEP1 NFATC3 ESX1 POU3F1 EN1 GLIS1 TBX2	1.25e-04	320	93	8	GO:0001227
GeneOntologyMolecularFunction	DNA-binding transcription repressor activity	BHLHE41 HIVEP1 NFATC3 ESX1 POU3F1 EN1 GLIS1 TBX2	1.42e-04	326	93	8	GO:0001217
GeneOntologyMolecularFunction	DNA-binding transcription activator activity, RNA polymerase II-specific	TBX19 FOXL2 HOXD8 NFATC3 GLI1 HLF GBX2 GLIS1 MEIS2 CREB3L2	2.78e-04	560	93	10	GO:0001228
GeneOntologyMolecularFunction	DNA-binding transcription activator activity	TBX19 FOXL2 HOXD8 NFATC3 GLI1 HLF GBX2 GLIS1 MEIS2 CREB3L2	3.03e-04	566	93	10	GO:0001216
GeneOntologyMolecularFunction	transcription corepressor activity	BHLHE41 TLE1 HIPK1 TLE4 CTBP1 RERE	7.08e-04	229	93	6	GO:0003714
GeneOntologyMolecularFunction	RNA polymerase II-specific DNA-binding transcription factor binding	BHLHE41 FOXL2 MED25 AHR GBX2 CTBP1 JMJD1C TBX6	7.33e-04	417	93	8	GO:0061629
GeneOntologyMolecularFunction	transcription coregulator activity	BHLHE41 TLE1 HIPK1 TLE4 SMARCC2 CTBP1 RERE KMT2E JMJD1C	1.23e-03	562	93	9	GO:0003712
GeneOntologyMolecularFunction	E-box binding	BHLHE41 AHR OLIG2	2.90e-03	61	93	3	GO:0070888
GeneOntologyBiologicalProcess	negative regulation of transcription by RNA polymerase II	BHLHE41 HIVEP1 FOXL2 HOXD8 ATXN1 NFATC3 TLE1 HIPK1 TLE4 SKOR2 MED25 AHR PRDM12 ESX1 SMARCC2 POU3F1 CTBP1 EN1 OLIG2 GLIS1 MEIS2 TBX2 TBX6	1.15e-10	1053	91	23	GO:0000122
GeneOntologyBiologicalProcess	negative regulation of DNA-templated transcription	BHLHE41 HIVEP1 FOXL2 HOXD8 ATXN1 NFATC3 TLE1 HIPK1 TLE4 SKOR2 MED25 AHR PRDM12 ESX1 SMARCC2 POU3F1 CTBP1 RERE EN1 OLIG2 GLIS1 MEIS2 TBX2 TBX6	5.34e-09	1399	91	24	GO:0045892
GeneOntologyBiologicalProcess	negative regulation of RNA biosynthetic process	BHLHE41 HIVEP1 FOXL2 HOXD8 ATXN1 NFATC3 TLE1 HIPK1 TLE4 SKOR2 MED25 AHR PRDM12 ESX1 SMARCC2 POU3F1 CTBP1 RERE EN1 OLIG2 GLIS1 MEIS2 TBX2 TBX6	6.49e-09	1413	91	24	GO:1902679
GeneOntologyBiologicalProcess	positive regulation of transcription by RNA polymerase II	TBX19 HIVEP1 FOXL2 HOXD8 ATXN1 NFATC3 GLI1 HLF MED25 AHR AUTS2 GBX2 POU3F1 CHD7 EN1 OLIG2 GLIS1 MEIS2 CREB3L2 TBX2 ZNF646 TBX6	1.12e-07	1390	91	22	GO:0045944
GeneOntologyBiologicalProcess	brain development	TBX19 SELENOP SEMA6D ATXN1 GLI1 SKOR2 KNDC1 GBX2 POU3F1 CHD7 RERE EMX1 EMX2 EN1 OLIG2 MEIS2	9.93e-07	859	91	16	GO:0007420
GeneOntologyBiologicalProcess	head development	TBX19 SELENOP SEMA6D ATXN1 GLI1 SKOR2 KNDC1 GBX2 POU3F1 CHD7 RERE EMX1 EMX2 EN1 OLIG2 MEIS2	2.39e-06	919	91	16	GO:0060322
GeneOntologyBiologicalProcess	animal organ morphogenesis	TBX19 FOXL2 HOXD8 GLI1 TLE1 HIPK1 SP6 AHR GBX2 CHD7 LTBP3 RELT EMX1 MMP20 EMX2 MEIS2 TBX2 TBX6	9.13e-06	1269	91	18	GO:0009887
GeneOntologyBiologicalProcess	pattern specification process	BHLHE41 HOXD8 GLI1 HIPK1 GBX2 EMX1 EMX2 EN1 MEIS2 TBX2 TBX6	2.01e-05	526	91	11	GO:0007389
GeneOntologyBiologicalProcess	cerebellum development	GLI1 SKOR2 KNDC1 GBX2 RERE EN1	3.50e-05	139	91	6	GO:0021549
GeneOntologyBiologicalProcess	cell proliferation in external granule layer	SKOR2 GBX2 RERE	4.46e-05	16	91	3	GO:0021924
GeneOntologyBiologicalProcess	cerebellar granule cell precursor proliferation	SKOR2 GBX2 RERE	4.46e-05	16	91	3	GO:0021930
GeneOntologyBiologicalProcess	regionalization	BHLHE41 HOXD8 GLI1 HIPK1 GBX2 EMX1 EMX2 EN1 TBX2 TBX6	4.88e-05	478	91	10	GO:0003002
GeneOntologyBiologicalProcess	metencephalon development	GLI1 SKOR2 KNDC1 GBX2 RERE EN1	5.99e-05	153	91	6	GO:0022037
GeneOntologyBiologicalProcess	central nervous system development	TBX19 SELENOP SEMA6D ATXN1 GLI1 SKOR2 KNDC1 GBX2 POU3F1 CHD7 RERE EMX1 EMX2 EN1 OLIG2 MEIS2	6.31e-05	1197	91	16	GO:0007417
GeneOntologyBiologicalProcess	cell proliferation in hindbrain	SKOR2 GBX2 RERE	6.46e-05	18	91	3	GO:0021534
GeneOntologyBiologicalProcess	anterior/posterior pattern specification	BHLHE41 HOXD8 HIPK1 GBX2 EMX2 EN1 TBX6	1.12e-04	247	91	7	GO:0009952
GeneOntologyBiologicalProcess	cerebellar cortex development	GLI1 SKOR2 KNDC1 RERE	2.75e-04	71	91	4	GO:0021695
GeneOntologyBiologicalProcess	hindbrain development	GLI1 SKOR2 KNDC1 GBX2 RERE EN1	3.20e-04	208	91	6	GO:0030902
GeneOntologyBiologicalProcess	neural precursor cell proliferation	SKOR2 GBX2 RERE EMX1 EMX2 SLC39A5	5.84e-04	233	91	6	GO:0061351
GeneOntologyBiologicalProcess	embryonic eye morphogenesis	FOXL2 HIPK1 TBX2	6.27e-04	38	91	3	GO:0048048
GeneOntologyBiologicalProcess	diencephalon development	TBX19 GLI1 GBX2 OLIG2	6.78e-04	90	91	4	GO:0021536
GeneOntologyBiologicalProcess	cerebral cortex regionalization	EMX1 EMX2	6.79e-04	9	91	2	GO:0021796
GeneOntologyBiologicalProcess	midbrain-hindbrain boundary development	GBX2 EN1	6.79e-04	9	91	2	GO:0030917
GeneOntologyCellularComponent	chromatin	BHLHE41 TBX19 FOXD4L4 FOXL2 FOXD4L1 HOXD8 NFATC3 FOXD4L3 BICRA HLF SP6 AHR ESX1 SMARCC2 GBX2 POU3F1 CHD2 CHD7 FOXD4L6 KMT2E EMX1 EMX2 EN1 OLIG2 JMJD1C SLX4 MEIS2 FOXD4L5 FOXD4 CREB3L2 TBX2 TBX6	4.93e-15	1480	90	32	GO:0000785
GeneOntologyCellularComponent	transcription regulator complex	BHLHE41 NFATC3 TLE1 TLE4 SKOR2 HLF MED25 AHR POU3F1 CTBP1 OLIG2 TBX2	9.32e-06	596	90	12	GO:0005667
MousePheno	reduced enamel thickness	SP6 LTBP3 MMP20	3.97e-05	12	81	3	MP:0002577
MousePheno	anophthalmia	FOXD4L4 FOXD4L1 FOXD4L3 CHD2 FOXD4L6 SLX4 FOXD4L5 FOXD4	8.72e-05	246	81	8	MP:0001293
MousePheno	decreased olfactory sensory neuron number	CHD7 CARNS1	9.91e-05	3	81	2	MP:0020348
MousePheno	abnormal incus long process morphology	CHD7 EMX2	9.91e-05	3	81	2	MP:0030396
MousePheno	abnormal stapes head morphology	CHD7 EMX2	9.91e-05	3	81	2	MP:0030402
MousePheno	abnormal enamel morphology	SP6 LTBP3 RELT MMP20	1.30e-04	45	81	4	MP:0002576
Domain	TF_fork_head_CS_2	FOXD4L4 FOXL2 FOXD4L1 FOXD4L3 FOXD4L6 FOXD4L5 FOXD4	2.55e-09	46	92	7	IPR030456
Domain	TF_fork_head_CS_1	FOXD4L4 FOXL2 FOXD4L1 FOXD4L3 FOXD4L6 FOXD4L5 FOXD4	2.99e-09	47	92	7	IPR018122
Domain	FH	FOXD4L4 FOXL2 FOXD4L1 FOXD4L3 FOXD4L6 FOXD4L5 FOXD4	4.05e-09	49	92	7	SM00339
Domain	FORK_HEAD_1	FOXD4L4 FOXL2 FOXD4L1 FOXD4L3 FOXD4L6 FOXD4L5 FOXD4	4.05e-09	49	92	7	PS00657
Domain	FORK_HEAD_2	FOXD4L4 FOXL2 FOXD4L1 FOXD4L3 FOXD4L6 FOXD4L5 FOXD4	4.05e-09	49	92	7	PS00658
Domain	Fork_head_dom	FOXD4L4 FOXL2 FOXD4L1 FOXD4L3 FOXD4L6 FOXD4L5 FOXD4	4.05e-09	49	92	7	IPR001766
Domain	FORK_HEAD_3	FOXD4L4 FOXL2 FOXD4L1 FOXD4L3 FOXD4L6 FOXD4L5 FOXD4	4.05e-09	49	92	7	PS50039
Domain	Forkhead	FOXD4L4 FOXL2 FOXD4L1 FOXD4L3 FOXD4L6 FOXD4L5 FOXD4	4.05e-09	49	92	7	PF00250
Domain	Homeodomain-like	SEMA6D HOXD8 ESX1 SMARCC2 GBX2 POU3F1 RERE EMX1 EMX2 EN1 MEIS2	7.07e-07	332	92	11	IPR009057
Domain	TF_Brachyury	TBX19 TBX2 TBX6	2.29e-06	6	92	3	IPR002070
Domain	-	HOXD8 ESX1 SMARCC2 GBX2 POU3F1 EMX1 EMX2 EN1 MEIS2	1.07e-05	283	92	9	1.10.10.60
Domain	-	FOXD4L4 FOXL2 FOXD4L1 FOXD4L3 SMARCC2 FOXD4L6 FOXD4L5 FOXD4	1.22e-05	218	92	8	1.10.10.10
Domain	Homeobox	HOXD8 ESX1 GBX2 POU3F1 EMX1 EMX2 EN1 MEIS2	2.03e-05	234	92	8	PF00046
Domain	HOMEOBOX_1	HOXD8 ESX1 GBX2 POU3F1 EMX1 EMX2 EN1 MEIS2	2.16e-05	236	92	8	PS00027
Domain	HOX	HOXD8 ESX1 GBX2 POU3F1 EMX1 EMX2 EN1 MEIS2	2.22e-05	237	92	8	SM00389
Domain	HOMEOBOX_2	HOXD8 ESX1 GBX2 POU3F1 EMX1 EMX2 EN1 MEIS2	2.36e-05	239	92	8	PS50071
Domain	Homeobox_dom	HOXD8 ESX1 GBX2 POU3F1 EMX1 EMX2 EN1 MEIS2	2.36e-05	239	92	8	IPR001356
Domain	FAM193_C	FAM193B FAM193A	2.40e-05	2	92	2	PF15914
Domain	FAM193_C	FAM193B FAM193A	2.40e-05	2	92	2	IPR031802
Domain	FAM193	FAM193B FAM193A	2.40e-05	2	92	2	IPR029717
Domain	WHTH_DNA-bd_dom	FOXD4L4 FOXL2 FOXD4L1 FOXD4L3 SMARCC2 FOXD4L6 FOXD4L5 FOXD4	2.58e-05	242	92	8	IPR011991
Domain	Homeobox_CS	HOXD8 ESX1 GBX2 POU3F1 EMX1 EMX2 EN1	3.72e-05	186	92	7	IPR017970
Domain	TF_T-box	TBX19 TBX2 TBX6	7.48e-05	17	92	3	IPR001699
Domain	TBOX	TBX19 TBX2 TBX6	7.48e-05	17	92	3	SM00425
Domain	TF_T-box_CS	TBX19 TBX2 TBX6	7.48e-05	17	92	3	IPR018186
Domain	-	TBX19 TBX2 TBX6	7.48e-05	17	92	3	2.60.40.820
Domain	TBOX_3	TBX19 TBX2 TBX6	7.48e-05	17	92	3	PS50252
Domain	T-box	TBX19 TBX2 TBX6	7.48e-05	17	92	3	PF00907
Domain	TBOX_1	TBX19 TBX2 TBX6	7.48e-05	17	92	3	PS01283
Domain	TBOX_2	TBX19 TBX2 TBX6	7.48e-05	17	92	3	PS01264
Domain	Homeobox_metazoa	HOXD8 GBX2 EMX1 EMX2 EN1	8.21e-05	90	92	5	IPR020479
Domain	p53-like_TF_DNA-bd	TBX19 NFATC3 TBX2 TBX6	1.34e-04	53	92	4	IPR008967
Domain	Groucho_enhance	TLE1 TLE4	2.38e-04	5	92	2	IPR009146
Domain	TLE_N	TLE1 TLE4	2.38e-04	5	92	2	PF03920
Domain	Groucho/TLE_N	TLE1 TLE4	2.38e-04	5	92	2	IPR005617
Domain	Chromo/shadow_dom	SMARCC2 CHD2 CHD7	5.67e-04	33	92	3	IPR000953
Domain	CHROMO	SMARCC2 CHD2 CHD7	5.67e-04	33	92	3	SM00298
Domain	SANT	SMARCC2 CHD7 RERE	1.92e-03	50	92	3	SM00717
Domain	SANT/Myb	SMARCC2 CHD7 RERE	2.15e-03	52	92	3	IPR001005
Domain	POU	ESX1 POU3F1	3.11e-03	17	92	2	IPR013847
Domain	ZINC_FINGER_C2H2_2	HIVEP1 GLI1 ZNF804B ZNF316 SP6 PRDM12 GPATCH8 ZNF831 GLIS1 ZNF646	4.78e-03	775	92	10	PS50157
Domain	HTH_motif	EMX1 EMX2 EN1	4.79e-03	69	92	3	IPR000047
Domain	ZINC_FINGER_C2H2_1	HIVEP1 GLI1 ZNF804B ZNF316 SP6 PRDM12 GPATCH8 ZNF831 GLIS1 ZNF646	4.87e-03	777	92	10	PS00028
Domain	Znf_C2H2_jaz	ZNF804B GPATCH8	5.20e-03	22	92	2	IPR022755
Domain	zf-C2H2_jaz	ZNF804B GPATCH8	5.20e-03	22	92	2	PF12171
Domain	Znf_C2H2-like	HIVEP1 GLI1 ZNF804B ZNF316 SP6 PRDM12 GPATCH8 ZNF831 GLIS1 ZNF646	5.76e-03	796	92	10	IPR015880
Domain	Chromo_domain	CHD2 CHD7	6.17e-03	24	92	2	IPR023780
Domain	Znf_C2H2	HIVEP1 GLI1 ZNF804B ZNF316 SP6 PRDM12 GPATCH8 ZNF831 GLIS1 ZNF646	6.22e-03	805	92	10	IPR007087
Domain	ZnF_C2H2	HIVEP1 GLI1 ZNF804B ZNF316 SP6 PRDM12 GPATCH8 ZNF831 GLIS1 ZNF646	6.38e-03	808	92	10	SM00355
Domain	SH3_9	ARHGEF19 ARHGEF5 RUSC1	6.74e-03	78	92	3	PF14604
Domain	Chromo	CHD2 CHD7	7.22e-03	26	92	2	PF00385
Domain	SANT_dom	SMARCC2 RERE	7.22e-03	26	92	2	IPR017884
Domain	CHROMO_1	CHD2 CHD7	8.35e-03	28	92	2	PS00598
Domain	SANT	SMARCC2 RERE	8.35e-03	28	92	2	PS51293
Domain	CHROMO_2	CHD2 CHD7	8.35e-03	28	92	2	PS50013
Domain	ENTH_VHS	TTI1 RPRD2	8.94e-03	29	92	2	IPR008942
Pathway	REACTOME_REPRESSION_OF_WNT_TARGET_GENES	TLE1 TLE4 CTBP1	6.99e-06	10	56	3	MM15156
Pathway	REACTOME_FORMATION_OF_THE_POSTERIOR_NEURAL_PLATE	GBX2 POU3F1 TBX6	6.99e-06	10	56	3	M48036
Pathway	REACTOME_REPRESSION_OF_WNT_TARGET_GENES	TLE1 TLE4 CTBP1	2.10e-05	14	56	3	M27402
Pathway	WP_DOPAMINERGIC_NEUROGENESIS	GLI1 GBX2 EN1	2.23e-04	30	56	3	M39580
Pathway	WP_DOPAMINERGIC_NEUROGENESIS	GLI1 GBX2 EN1	2.23e-04	30	56	3	MM15831
Pathway	REACTOME_DEACTIVATION_OF_THE_BETA_CATENIN_TRANSACTIVATING_COMPLEX	TLE1 TLE4 CTBP1	2.71e-04	32	56	3	MM14975
Pathway	REACTOME_DEACTIVATION_OF_THE_BETA_CATENIN_TRANSACTIVATING_COMPLEX	TLE1 TLE4 CTBP1	6.11e-04	42	56	3	M27272
Pubmed	A census of human transcription factors: function, expression and evolution.	BHLHE41 TBX19 FOXD4L4 HIVEP1 FOXL2 FOXD4L1 HOXD8 NFATC3 FOXD4L3 GLI1 SKOR2 HLF SP6 PRDM12 ESX1 GBX2 POU3F1 RERE EMX1 EMX2 EN1 OLIG2 GLIS1 MEIS2 FOXD4 CREB3L2 TBX2 TBX6	5.49e-22	908	95	28	19274049
Pubmed	Functional equivalency between Otx2 and Otx1 in development of the rostral head.	FOXD4L4 FOXD4L1 FOXD4L3 FOXD4L6 EMX2 EN1 FOXD4L5 FOXD4	1.69e-16	19	95	8	9895322
Pubmed	Neural transcription factors bias cleavage stage blastomeres to give rise to neural ectoderm.	FOXD4L4 FOXD4L1 FOXD4L3 FOXD4L6 FOXD4L5 FOXD4	3.54e-16	6	95	6	27092474
Pubmed	A genetic study of the suppressors of the Engrailed-1 cerebellar phenotype.	FOXD4L4 FOXD4L1 FOXD4L3 FOXD4L6 EN1 FOXD4L5 FOXD4	1.53e-15	13	95	7	16884697
Pubmed	Otx2 is required to respond to signals from anterior neural ridge for forebrain specification.	FOXD4L4 FOXD4L1 FOXD4L3 GBX2 FOXD4L6 EMX2 FOXD4L5 FOXD4	1.63e-15	24	95	8	11820816
Pubmed	Impact of cytosine methylation on DNA binding specificities of human transcription factors.	BHLHE41 TBX19 FOXL2 HOXD8 NFATC3 SKOR2 HLF ESX1 GBX2 POU3F1 EMX1 EMX2 EN1 OLIG2 GLIS1 MEIS2 TBX2 TBX6	8.68e-15	544	95	18	28473536
Pubmed	The mouse fkh-2 gene. Implications for notochord, foregut, and midbrain regionalization.	FOXD4L4 FOXD4L1 FOXD4L3 FOXD4L6 FOXD4L5 FOXD4	9.86e-15	8	95	6	8530406
Pubmed	An amphioxus winged helix/forkhead gene, AmphiFoxD: insights into vertebrate neural crest evolution.	FOXD4L4 FOXD4L1 FOXD4L3 FOXD4L6 FOXD4L5 FOXD4	2.95e-14	9	95	6	12412011
Pubmed	Sequential roles for Otx2 in visceral endoderm and neuroectoderm for forebrain and midbrain induction and specification.	FOXD4L4 FOXD4L1 FOXD4L3 FOXD4L6 EN1 FOXD4L5 FOXD4	1.02e-13	21	95	7	9449667
Pubmed	A Requirement for Zic2 in the Regulation of Nodal Expression Underlies the Establishment of Left-Sided Identity.	FOXD4L4 FOXD4L1 FOXD4L3 FOXD4L6 EN1 FOXD4L5 FOXD4	3.02e-13	24	95	7	29992973
Pubmed	Cloning and characterization of seven human forkhead proteins: binding site specificity and DNA bending.	FOXD4L4 FOXD4L1 FOXD4L3 FOXD4L6 FOXD4L5 FOXD4	5.98e-13	13	95	6	7957066
Pubmed	Six members of the mouse forkhead gene family are developmentally regulated.	FOXD4L4 FOXD4L1 FOXD4L3 FOXD4L6 FOXD4L5 FOXD4	1.74e-12	15	95	6	7689224
Pubmed	Strain-specific modifier genes of Cecr2-associated exencephaly in mice: genetic analysis and identification of differentially expressed candidate genes.	FOXD4L4 FOXD4L1 FOXD4L3 FOXD4L6 FOXD4L5 FOXD4	1.74e-12	15	95	6	22045912
Pubmed	Expression of the winged helix genes fkh-4 and fkh-5 defines domains in the central nervous system.	FOXD4L4 FOXD4L1 FOXD4L3 FOXD4L6 FOXD4L5 FOXD4	2.77e-12	16	95	6	8861101
Pubmed	Developmental competence of the gut endoderm: genetic potentiation by GATA and HNF3/fork head proteins.	FOXD4L4 FOXD4L1 FOXD4L3 FOXD4L6 FOXD4L5 FOXD4	2.77e-12	16	95	6	10208738
Pubmed	Forkhead transcription factor Foxf2 (LUN)-deficient mice exhibit abnormal development of secondary palate.	FOXD4L4 FOXD4L1 FOXD4L3 FOXD4L6 FOXD4L5 FOXD4	1.33e-11	20	95	6	12812790
Pubmed	Crucial roles of Foxa2 in mouse anterior-posterior axis polarization via regulation of anterior visceral endoderm-specific genes.	FOXD4L4 FOXD4L1 FOXD4L3 FOXD4L6 FOXD4L5 FOXD4	2.55e-11	22	95	6	17389379
Pubmed	Ssdp1 regulates head morphogenesis of mouse embryos by activating the Lim1-Ldb1 complex.	FOXD4L4 FOXD4L1 FOXD4L3 FOXD4L6 FOXD4L5 FOXD4	7.79e-11	26	95	6	15857913
Pubmed	Molecular profiling of synovial joints: use of microarray analysis to identify factors that direct the development of the knee and elbow.	FOXD4L4 FOXD4L1 FOXD4L3 FOXD4L6 FOXD4L5 FOXD4	1.60e-10	29	95	6	22972626
Pubmed	Screening large numbers of expression patterns of transcription factors in late stages of the mouse thymus.	FOXD4L4 FOXD4L1 HOXD8 FOXD4L3 ESX1 GBX2 POU3F1 FOXD4L6 MEIS2 FOXD4L5 FOXD4	1.67e-10	263	95	11	20932939
Pubmed	Interaction network of human early embryonic transcription factors.	HIVEP1 ATXN1 BICRA TLE1 TLE4 AUTS2 SMARCC2 CTBP1 CHD7 RERE SLX4 TBX2	2.39e-10	351	95	12	38297188
Pubmed	FOXD4a and FOXD4b, two new winged helix transcription factors, are expressed in human leukemia cell lines.	FOXD4L4 FOXD4L6 FOXD4L5 FOXD4	2.61e-10	5	95	4	12234674
Pubmed	Genome-scale study of transcription factor expression in the branching mouse lung.	FOXD4L4 FOXD4L1 FOXD4L3 POU3F1 FOXD4L6 FOXD4L5 FOXD4	6.89e-10	67	95	7	22711520
Pubmed	Dlx1&2 and Mash1 transcription factors control MGE and CGE patterning and differentiation through parallel and overlapping pathways.	GLI1 TLE4 GBX2 POU3F1 EMX1 EMX2 OLIG2 MEIS2	2.84e-09	130	95	8	19386638
Pubmed	The AERO system: a 3D-like approach for recording gene expression patterns in the whole mouse embryo.	GLI1 SP6 GBX2 POU3F1 EMX2 EN1 PHF21B MEIS2 TBX2	2.94e-09	191	95	9	24146773
Pubmed	Proximity-dependent Mapping of the Androgen Receptor Identifies Kruppel-like Factor 4 as a Functional Partner.	HIVEP1 ATXN1 RBM33 TLE1 TLE4 SMARCC2 RPRD2 CHD7 RERE JMJD1C	3.55e-09	268	95	10	33640491
Pubmed	Dlx1&2 and Mash1 transcription factors control striatal patterning and differentiation through parallel and overlapping pathways.	GLI1 TLE4 GBX2 POU3F1 EMX1 EMX2 OLIG2 MEIS2	3.61e-09	134	95	8	19030180
Pubmed	A genome-wide screen to identify transcription factors expressed in pelvic Ganglia of the lower urinary tract.	FOXD4L4 HIVEP1 FOXD4L1 HOXD8 FOXD4L3 GLI1 SP6 AHR POU3F1 FOXD4L6 EMX2 MEIS2 FOXD4L5 FOXD4	8.42e-09	709	95	14	22988430
Pubmed	Human transcription factor protein interaction networks.	HIVEP1 UBN1 ATXN1 NFATC3 RBM33 BICRA TLE1 TLE4 AUTS2 SMARCC2 HELZ CTBP1 RPRD2 CHD7 RERE GPATCH8 EN1 JMJD1C SLX4	9.36e-09	1429	95	19	35140242
Pubmed	Gene content and function of the ancestral chromosome fusion site in human chromosome 2q13-2q14.1 and paralogous regions.	FOXD4L4 FOXD4L1 FOXD4L3 FOXD4	1.70e-08	11	95	4	12421752
Pubmed	Transcriptional network orchestrating regional patterning of cortical progenitors.	TLE1 POU3F1 EMX1 EMX2 MEIS2	7.31e-08	39	95	5	34921112
Pubmed	Shh and Gli3 regulate formation of the telencephalic-diencephalic junction and suppress an isthmus-like signaling source in the forebrain.	GBX2 EMX1 EMX2 EN1	9.27e-08	16	95	4	21925158
Pubmed	Replacement of related POU transcription factors leads to severe defects in mouse forebrain development.	POU3F1 EMX1 EMX2 EN1	9.27e-08	16	95	4	19527706
Pubmed	Diverse fates of paralogs following segmental duplication of telomeric genes.	FOXD4L4 FOXD4L1 FOXD4L3 FOXD4	3.68e-07	22	95	4	15233989
Pubmed	Neural stem cell lineages are regionally specified, but not committed, within distinct compartments of the developing brain.	EMX1 EMX2 EN1	3.93e-07	6	95	3	11782416
Pubmed	Murine embryonic stem cell-derived pyramidal neurons integrate into the cerebral cortex and appropriately project axons to subcortical targets.	POU3F1 EMX1 EMX2 EN1	4.44e-07	23	95	4	20089898
Pubmed	Single cell enhancer activity distinguishes GABAergic and cholinergic lineages in embryonic mouse basal ganglia.	GLI1 TLE4 GBX2 POU3F1 OLIG2	5.12e-07	57	95	5	35377797
Pubmed	Emx2 directs the development of diencephalon in cooperation with Otx2.	GBX2 EMX1 EMX2 EN1	5.32e-07	24	95	4	11493561
Pubmed	The lack of Emx2 causes impairment of Reelin signaling and defects of neuronal migration in the developing cerebral cortex.	POU3F1 EMX1 EMX2	6.86e-07	7	95	3	10648716
Pubmed	Suppressor of Fused Is Critical for Maintenance of Neuronal Progenitor Identity during Corticogenesis.	GLI1 TLE4 EMX1 OLIG2	7.46e-07	26	95	4	26387942
Pubmed	Targeting TRIM37-driven centrosome dysfunction in 17q23-amplified breast cancer.	KRBA1 FAM193A UBN1 ATXN1 SIPA1L3 RPRD2 JMJD1C	7.72e-07	184	95	7	32908313
Pubmed	Role of neuroepithelial Sonic hedgehog in hypothalamic patterning.	GLI1 GBX2 EMX1 EMX2	1.02e-06	28	95	4	19474326
Pubmed	Chromatin regulation by BAF170 controls cerebral cortical size and thickness.	TLE1 TLE4 SMARCC2 EMX1	1.02e-06	28	95	4	23643363
Pubmed	SMRT-mediated repression of an H3K27 demethylase in progression from neural stem cell to neuron.	GLI1 POU3F1 EMX1 EMX2	1.18e-06	29	95	4	17928865
Pubmed	Developmental trajectories of thalamic progenitors revealed by single-cell transcriptome profiling and Shh perturbation.	GLI1 PRDM12 GBX2 OLIG2	1.55e-06	31	95	4	36476860
Pubmed	Spatiotemporal Decline of BMP Signaling Activity in Neural Progenitors Mediates Fate Transition and Safeguards Neurogenesis.	SKOR2 EN1 OLIG2	1.64e-06	9	95	3	32187534
Pubmed	Proximity-dependent biotin identification (BioID) reveals a dynamic LSD1-CoREST interactome during embryonic stem cell differentiation.	HIVEP1 FAM193A TLE1 TLE4 RUSC1 CTBP1 CHD7 RERE JMJD1C	2.27e-06	418	95	9	34709266
Pubmed	The Gli3 hypomorphic mutation Pdn causes selective impairment in the growth, patterning, and axon guidance capability of the lateral ganglionic eminence.	GLI1 GBX2 EMX2 OLIG2	2.56e-06	35	95	4	20943929
Pubmed	Fgf8b-containing spliceforms, but not Fgf8a, are essential for Fgf8 function during development of the midbrain and cerebellum.	GBX2 EN1 MEIS2	3.21e-06	11	95	3	19968985
Pubmed	Cooperation between Otx1 and Otx2 genes in developmental patterning of rostral brain.	GBX2 EMX2 EN1	4.27e-06	12	95	3	9486536
Pubmed	Mesodermal patterning defect in mice lacking the Ste20 NCK interacting kinase (NIK).	GBX2 EN1 TBX6	4.27e-06	12	95	3	11290295
Pubmed	Transcriptional Networks Controlled by NKX2-1 in the Development of Forebrain GABAergic Neurons.	GBX2 POU3F1 OLIG2 MEIS2	4.43e-06	40	95	4	27657450
Pubmed	The STUbL RNF4 regulates protein group SUMOylation by targeting the SUMO conjugation machinery.	SHANK1 RBM33 IQSEC2 ZNF316 AUTS2 SMARCC2 FNDC3A CHD2 RERE GPATCH8 KMT2E JMJD1C SLX4 ZNF646	4.89e-06	1203	95	14	29180619
Pubmed	An atlas of combinatorial transcriptional regulation in mouse and man.	TBX19 NFATC3 GLI1 TLE1 HLF AHR CTBP1 RERE EMX1 EMX2 MEIS2 TBX2	4.93e-06	877	95	12	20211142
Pubmed	Emx2 is required for growth of the hippocampus but not for hippocampal field specification.	POU3F1 EMX1 EMX2	5.54e-06	13	95	3	10729342
Pubmed	Genetic control of brain morphogenesis through Otx gene dosage requirement.	GBX2 EMX2 EN1	5.54e-06	13	95	3	9342056
Pubmed	Absence of Cajal-Retzius cells and subplate neurons associated with defects of tangential cell migration from ganglionic eminence in Emx1/2 double mutant cerebral cortex.	POU3F1 EMX1 EMX2	5.54e-06	13	95	3	12091317
Pubmed	AUTS2 Governs Cerebellar Development, Purkinje Cell Maturation, Motor Function and Social Communication.	GLI1 AUTS2 EN1	7.03e-06	14	95	3	33305180
Pubmed	The transcription factors Emx1 and Emx2 suppress choroid plexus development and promote neuroepithelial cell fate.	EMX1 EMX2	7.38e-06	2	95	2	16793035
Pubmed	Hedgehog-responsive candidate cell of origin for diffuse intrinsic pontine glioma.	GLI1 OLIG2	7.38e-06	2	95	2	21368213
Pubmed	Temporal enhancer profiling of parallel lineages identifies AHR and GLIS1 as regulators of mesenchymal multipotency.	AHR GLIS1	7.38e-06	2	95	2	30544251
Pubmed	Regulation of sarcomagenesis by the empty spiracles homeobox genes EMX1 and EMX2.	EMX1 EMX2	7.38e-06	2	95	2	34016958
Pubmed	Combinatorial expression patterns of individual TLE proteins during cell determination and differentiation suggest non-redundant functions for mammalian homologs of Drosophila Groucho.	TLE1 TLE4	7.38e-06	2	95	2	9572356
Pubmed	Empty spiracles homeobox genes EMX1 and EMX2 regulate WNT pathway activation in sarcomagenesis.	EMX1 EMX2	7.38e-06	2	95	2	34364391
Pubmed	Manganese-enhanced magnetic resonance imaging (MEMRI) of mouse brain development.	GBX2 EN1	7.38e-06	2	95	2	15761950
Pubmed	Emx homeogenes and mouse brain development.	EMX1 EMX2	7.38e-06	2	95	2	10906797
Pubmed	MRI analysis of cerebellar and vestibular developmental phenotypes in Gbx2 conditional knockout mice.	GBX2 EN1	7.38e-06	2	95	2	23400959
Pubmed	EMX homeobox genes regulate microphthalmia and alter melanocyte biology.	EMX1 EMX2	7.38e-06	2	95	2	16197942
Pubmed	Two vertebrate homeobox genes related to the Drosophila empty spiracles gene are expressed in the embryonic cerebral cortex.	EMX1 EMX2	7.38e-06	2	95	2	1352754
Pubmed	Arx Expression Suppresses Ventralization of the Developing Dorsal Forebrain.	GLI1 EMX1 OLIG2	8.77e-06	15	95	3	30659230
Pubmed	Hedgehog-FGF signaling axis patterns anterior mesoderm during gastrulation.	GLI1 GLIS1 TBX6	8.77e-06	15	95	3	32561646
Pubmed	The ventral hippocampus is the embryonic origin for adult neural stem cells in the dentate gyrus.	GLI1 EMX1 OLIG2	1.08e-05	16	95	3	23643936
Pubmed	Effects of canonical Wnt signaling on dorso-ventral specification of the mouse telencephalon.	EMX1 EMX2 OLIG2	1.08e-05	16	95	3	15708565
Pubmed	A brain precursor atlas reveals the acquisition of developmental-like states in adult cerebral tumours.	EMX1 EMX2 OLIG2	1.08e-05	16	95	3	35853870
Pubmed	Bmp4 in limb bud mesoderm regulates digit pattern by controlling AER development.	GLI1 EN1 TBX2	1.08e-05	16	95	3	15581864
Pubmed	Inhibition of Sox2-dependent activation of Shh in the ventral diencephalon by Tbx3 is required for formation of the neurohypophysis.	TBX19 FOXL2 EMX2 TBX2	1.28e-05	52	95	4	23674600
Pubmed	Increased β-catenin activity in the anterior neural plate induces ectopic mid-hindbrain characteristics.	GBX2 EMX2 EN1	1.31e-05	17	95	3	22102609
Pubmed	Dorsoventral patterning of the telencephalon is disrupted in the mouse mutant extra-toes(J).	GLI1 EMX1 EMX2	1.31e-05	17	95	3	10625551
Pubmed	A stream of cells migrating from the caudal telencephalon reveals a link between the amygdala and neocortex.	POU3F1 EMX1 EMX2	1.31e-05	17	95	3	17694053
Pubmed	Resolution of cell fate decisions revealed by single-cell gene expression analysis from zygote to blastocyst.	TBX19 KRBA1 HIVEP1 ATXN1 AHR GBX2 POU3F1 GLIS1 MEIS2 CREB3L2 ZNF646	1.32e-05	808	95	11	20412781
Pubmed	Identification and functional characterization of transcriptional activators in human cells.	HIVEP1 BICRA TLE1 AUTS2 SMARCC2 CTBP1 CHD7 JMJD1C	1.40e-05	398	95	8	35016035
Pubmed	Stem cell competition driven by the Axin2-p53 axis controls brain size during murine development.	GLI1 EMX1 OLIG2	1.56e-05	18	95	3	37054704
Pubmed	Hox Proteins Coordinate Motor Neuron Differentiation and Connectivity Programs through Ret/Gfrα Genes.	POU3F1 OLIG2 MEIS2	1.56e-05	18	95	3	26904955
Pubmed	All mouse ventral spinal cord patterning by hedgehog is Gli dependent and involves an activator function of Gli3.	GLI1 EN1 OLIG2	1.56e-05	18	95	3	14723851
Pubmed	Distinct functions of the major Fgf8 spliceform, Fgf8b, before and during mouse gastrulation.	GBX2 EN1 TBX6	1.56e-05	18	95	3	17507393
Pubmed	Atrophin 2 recruits histone deacetylase and is required for the function of multiple signaling centers during mouse embryogenesis.	GLI1 RERE EMX2	1.56e-05	18	95	3	14645126
Pubmed	Gli3 is required for Emx gene expression during dorsal telencephalon development.	GLI1 EMX1 EMX2	1.85e-05	19	95	3	10409502
Pubmed	Cortical Neural Stem Cell Lineage Progression Is Regulated by Extrinsic Signaling Molecule Sonic Hedgehog.	GLI1 EMX1 OLIG2	1.85e-05	19	95	3	32234482
Pubmed	Genetic mapping of 20 novel expressed sequence tags from midgestation mouse embryos suggests chromosomal clustering.	TLE1 TLE4 MED25	1.85e-05	19	95	3	9070936
Pubmed	Parallel Pbx-Dependent Pathways Govern the Coalescence and Fate of Motor Columns.	HLF POU3F1 EN1 OLIG2	1.98e-05	58	95	4	27568519
Pubmed	Microarray analysis of Foxa2 mutant mouse embryos reveals novel gene expression and inductive roles for the gastrula organizer and its derivatives.	FOXD4L4 FOXD4L1 FOXD4L3 CHD7 FOXD4L6 FOXD4L5 FOXD4	2.17e-05	306	95	7	18973680
Pubmed	CYP26A1 and CYP26C1 cooperatively regulate anterior-posterior patterning of the developing brain and the production of migratory cranial neural crest cells in the mouse.	EMX2 EN1 MEIS2	2.18e-05	20	95	3	17067568
Pubmed	Sonic hedgehog maintains the identity of cortical interneuron progenitors in the ventral telencephalon.	GLI1 POU3F1 OLIG2	2.18e-05	20	95	3	16221724
Pubmed	beta-Catenin regulates intercellular signalling networks and cell-type specific transcription in the developing mouse midbrain-rhombomere 1 region.	GLI1 GBX2 EN1	2.18e-05	20	95	3	20532162
Pubmed	Transcriptional regulation of cortical neuron migration by POU domain factors.	TLE1 TLE4 POU3F1	2.18e-05	20	95	3	11859196
Pubmed	A genomic atlas of mouse hypothalamic development.	TBX19 SEMA6D LTBP3 EMX2 OLIG2 TBX2	2.19e-05	205	95	6	20436479
Pubmed	TorsinA hypofunction causes abnormal twisting movements and sensorimotor circuit neurodegeneration.	EMX1 EN1	2.21e-05	3	95	2	24937429
Pubmed	Disruption of the ATXN1-CIC complex reveals the role of additional nuclear ATXN1 interactors in spinocerebellar ataxia type 1.	ATXN1 EN1	2.21e-05	3	95	2	36577402
Pubmed	An amphioxus Emx homeobox gene reveals duplication during vertebrate evolution.	EMX1 EMX2	2.21e-05	3	95	2	11018158
Pubmed	Cell behaviors and genetic lineages of the mesencephalon and rhombomere 1.	GLI1 EN1	2.21e-05	3	95	2	15294143
Interaction	SP7 interactions	HIVEP1 ATXN1 RBM33 BICRA TLE1 TLE4 SMARCC2 RPRD2 CHD7 RERE GPATCH8	1.40e-07	304	92	11	int:SP7
Interaction	TENT5B interactions	HIVEP1 ATXN1 RUSC1 TNS2 FNDC3A TBX6	7.30e-07	69	92	6	int:TENT5B
Interaction	ERG interactions	HIVEP1 ATXN1 BICRA TLE1 HIPK1 SMARCC2 CHD7 RERE SLX4	8.30e-07	223	92	9	int:ERG
Interaction	TLE3 interactions	HIVEP1 FAM193A ATXN1 TLE1 TLE4 AUTS2 SMARCC2 HELZ RERE GPATCH8 EN1	1.15e-06	376	92	11	int:TLE3
Interaction	TLX1 interactions	HIVEP1 TLE1 TLE4 AUTS2 CHD7 EMX1 EMX2 MEIS2	1.38e-06	175	92	8	int:TLX1
Interaction	GSC interactions	HIVEP1 ATXN1 TLE1 TLE4 AUTS2 RERE	2.88e-06	87	92	6	int:GSC
Interaction	ATXN1L interactions	HIVEP1 ATXN1 SMARCC2 CTBP1 GPATCH8 EN1 TBX2	5.68e-06	150	92	7	int:ATXN1L
Interaction	KRTAP6-3 interactions	FOXD4L1 MED25 AUTS2 TNS2 MEIS2 TBX2 TBX6	9.03e-06	161	92	7	int:KRTAP6-3
Interaction	EN1 interactions	HIVEP1 ATXN1 TLE1 TLE4 CHD7 EN1	1.12e-05	110	92	6	int:EN1
Interaction	TBXT interactions	HIVEP1 ATXN1 TLE1 TLE4 SMARCC2 CHD7	1.52e-05	116	92	6	int:TBXT
Interaction	SMG7 interactions	HIVEP1 FAM193A RBM33 TLE1 TLE4 HELZ RPRD2 GPATCH8 JMJD1C	1.53e-05	319	92	9	int:SMG7
Interaction	SUPT5H interactions	HIVEP1 ATXN1 RBM33 BICRA INTS15 TNS2 RPRD2 CHD7 JMJD1C SLX4	1.70e-05	408	92	10	int:SUPT5H
Interaction	RBPMS interactions	HIVEP1 DCAF8 ATXN1 FBF1 RUSC1 SMARCC2 TNS2 MEIS2 TBX6	2.53e-05	340	92	9	int:RBPMS
Interaction	TLE2 interactions	FAM193A TLE1 TLE4 HELZ EMX2 EN1	3.75e-05	136	92	6	int:TLE2
Interaction	HNF4A interactions	HIVEP1 UBN1 ATXN1 BICRA TLE1 SMARCC2 CHD7 SLX4	3.75e-05	275	92	8	int:HNF4A
Interaction	FEV interactions	HIVEP1 ATXN1 BICRA TLE1 TLE4 CHD7 GPATCH8	4.03e-05	203	92	7	int:FEV
Interaction	PAX6 interactions	HIVEP1 ATXN1 BICRA TLE1 TLE4 SMARCC2 CHD7 EN1 MEIS2	4.49e-05	366	92	9	int:PAX6
Interaction	EGR2 interactions	HIVEP1 ATXN1 BICRA TLE1 CHD7 RERE	1.33e-04	171	92	6	int:EGR2
Interaction	NUP35 interactions	ARHGEF19 RBM33 GLI1 TLE1 AUTS2 HELZ FNDC3A GPATCH8 JMJD1C	1.38e-04	424	92	9	int:NUP35
Interaction	PAX8 interactions	HIVEP1 ATXN1 TLE1 TLE4 CHD7	1.56e-04	111	92	5	int:PAX8
Interaction	CRX interactions	ATXN1 BICRA TLE1 TNS2 CHD7 RERE TBX6	1.64e-04	254	92	7	int:CRX
Interaction	NUP50 interactions	ARHGEF19 RBM33 SMARCC2 TTI1 HELZ RPRD2 CHD7 SLX4	1.68e-04	341	92	8	int:NUP50
Interaction	TBR1 interactions	HIVEP1 ATXN1 TLE1 TLE4 CHD7	1.69e-04	113	92	5	int:TBR1
Interaction	ALG13 interactions	RBM33 TLE1 HELZ RERE GPATCH8 JMJD1C	1.93e-04	183	92	6	int:ALG13
Interaction	ZBTB9 interactions	FOXD4L1 FOXD4L6 EN1 SLX4 FOXD4	1.99e-04	117	92	5	int:ZBTB9
Interaction	KRTAP6-2 interactions	FOXD4L1 FOXD4L3 RUSC1 RERE MEIS2 TBX6	2.17e-04	187	92	6	int:KRTAP6-2
Interaction	ELK3 interactions	HIVEP1 ATXN1 TLE1 CTBP1 CHD7	2.24e-04	120	92	5	int:ELK3
Interaction	VSX1 interactions	ATXN1 TLE1 TLE4 CHD7	2.36e-04	66	92	4	int:VSX1
Interaction	HNF1B interactions	HIVEP1 UBN1 ATXN1 BICRA TLE1 CHD7	2.36e-04	190	92	6	int:HNF1B
Interaction	PAX7 interactions	HIVEP1 ATXN1 TLE1 TLE4 CHD7	2.61e-04	124	92	5	int:PAX7
Interaction	KLF12 interactions	HIVEP1 ATXN1 TLE4 CTBP1 CHD7 GLIS1	2.64e-04	194	92	6	int:KLF12
Interaction	GATA2 interactions	HIVEP1 ATXN1 TLE1 TLE4 SMARCC2 CHD7	3.03e-04	199	92	6	int:GATA2
Interaction	ANO9 interactions	ATXN1 TNS2	3.06e-04	6	92	2	int:ANO9
Cytoband	9q21.11	FOXD4L4 FOXD4L3 FOXD4L6 FOXD4L5	4.52e-07	30	95	4	9q21.11
Cytoband	Ensembl 112 genes in cytogenetic band chr9q21	FOXD4L4 FOXD4L3 TLE1 TLE4 FOXD4L5	6.14e-05	199	95	5	chr9q21
Cytoband	19q13.3	SHANK1 BICRA MED25	6.75e-04	82	95	3	19q13.3
GeneFamily	T-boxes	TBX19 TBX2 TBX6	4.17e-05	18	69	3	766
GeneFamily	GATA zinc finger domain containing\|Myb/SANT domain containing	SMARCC2 CHD7 RERE	1.09e-03	53	69	3	532
GeneFamily	DNA helicases	CHD2 CHD7	1.88e-03	17	69	2	1167
GeneFamily	NKL subclass homeoboxes and pseudogenes	EMX1 EMX2 EN1	2.14e-03	67	69	3	519
Coexpression	BENPORATH_EED_TARGETS	BHLHE41 FOXD4L4 FOXL2 FOXD4L1 SEMA6D HOXD8 FOXD4L3 HLF AHR AUTS2 PRDM12 ESX1 GBX2 POU3F1 EMX2 EN1 OLIG2 JMJD1C TBX2	6.95e-09	1059	95	19	M7617
Coexpression	BENPORATH_PRC2_TARGETS	BHLHE41 FOXD4L4 FOXL2 FOXD4L1 SEMA6D HOXD8 FOXD4L3 PRDM12 ESX1 GBX2 POU3F1 EN1 OLIG2 TBX2	9.31e-08	650	95	14	M8448
Coexpression	BENPORATH_SUZ12_TARGETS	BHLHE41 FOXD4L4 FOXL2 FOXD4L1 SEMA6D HOXD8 FOXD4L3 HLF PRDM12 ESX1 GBX2 POU3F1 EMX1 EMX2 EN1 OLIG2 TBX2	1.70e-07	1035	95	17	M9898
Coexpression	MEISSNER_BRAIN_HCP_WITH_H3K27ME3	FOXD4L4 FOXD4L1 HOXD8 FOXD4L3 ESX1 GBX2 FOXD4L6 FOXD4L5 FOXD4	8.90e-07	282	95	9	MM822
Coexpression	BENPORATH_ES_WITH_H3K27ME3	BHLHE41 FOXD4L4 MAST4 FOXL2 FOXD4L1 SEMA6D HOXD8 FOXD4L3 PRSS12 PRDM12 ESX1 GBX2 POU3F1 EN1 OLIG2 TBX2	2.41e-06	1115	95	16	M10371
Coexpression	MORI_MATURE_B_LYMPHOCYTE_UP	FOXD4L4 FOXD4L1 FOXD4L3 FOXD4L6 FOXD4L5 FOXD4	2.46e-06	106	95	6	MM595
Coexpression	MEISSNER_NPC_HCP_WITH_H3K4ME2_AND_H3K27ME3	FOXD4L4 FOXD4L1 FOXD4L3 AHR CACNA1I FOXD4L6 EMX1 FOXD4L5 FOXD4	6.12e-06	357	95	9	MM828
Coexpression	DAZARD_RESPONSE_TO_UV_NHEK_DN	MAST4 PRSS12 TLE4 AHR AUTS2 HELZ FNDC3A CREB3L2	1.38e-05	300	95	8	M8702
Coexpression	MIKKELSEN_NPC_HCP_WITH_H3K4ME3_AND_H3K27ME3	FOXD4L4 FOXD4L1 FOXD4L3 KNDC1 FOXD4L6 FOXD4L5 FOXD4	1.44e-05	217	95	7	MM861
Coexpression	BENPORATH_ES_CORE_NINE_CORRELATED	TBX19 HIVEP1 TLE1 EN1 CREB3L2	3.23e-05	100	95	5	M14079
Coexpression	GSE14415_FOXP3_KO_NATURAL_TREG_VS_TCONV_UP	SELENOP KRBA1 PRSS12 BICRA CHD2 CARNS1	3.80e-05	171	95	6	M2947
Coexpression	GSE21546_UNSTIM_VS_ANTI_CD3_STIM_ELK1_KO_DP_THYMOCYTES_DN	KRBA1 HIVEP1 AHR DANCR CHD2 MMP20	6.25e-05	187	95	6	M7538
Coexpression	MIKKELSEN_MEF_HCP_WITH_H3K27ME3	FOXD4L4 FOXD4L1 FOXD4L3 KNDC1 FOXD4L6 ASIC4 EMX1 OLIG2 FOXD4L5 FOXD4	6.56e-05	601	95	10	MM866
Coexpression	GSE22229_RENAL_TRANSPLANT_VS_HEALTHY_PBMC_DN	KRBA1 SIPA1L3 SMARCC2 CHD2 LTBP3 ITGA2B	8.57e-05	198	95	6	M7480
Coexpression	GSE18281_SUBCAPSULAR_VS_PERIMEDULLARY_CORTICAL_REGION_OF_THYMUS_UP	FAM193B SELENOP NFATC3 HIPK1 TNS2 HELZ	9.05e-05	200	95	6	M7235
ToppCell	wk_15-18-Hematologic-Myeloid-aDC_1\|wk_15-18 / Celltypes from embryonic and fetal-stage human lung	FOXD4L4 FOXD4L1 FOXD4L3 FOXD4L6 FOXD4L5 FOXD4	2.21e-06	177	95	6	ccf5dc54780d6039a4d062dee88440c011ddc0a3
ToppCell	frontal_cortex-Neuronal-glutamatergic_neuron-NP-L6_NP_ALM_Trh\|frontal_cortex / Per Region, Lineage, Cell class, Cell type, Cell subtype	PRSS12 TLE4 BBOX1 SLC39A5 MEIS2	1.70e-05	149	95	5	fe9dff31a30dabd212d53d1295f9f13ff32cb217
ToppCell	frontal_cortex-Neuronal-glutamatergic_neuron-NP-L5_NP_ALM_Trhr_Nefl\|frontal_cortex / Per Region, Lineage, Cell class, Cell type, Cell subtype	PRSS12 TLE4 HLF SLC39A5 MEIS2	1.70e-05	149	95	5	558a441804dbcd5b5f39a3b1933b48976711ff15
ToppCell	frontal_cortex-Neuronal-glutamatergic_neuron-NP\|frontal_cortex / Per Region, Lineage, Cell class, Cell type, Cell subtype	PRSS12 TLE4 HLF SLC39A5 MEIS2	1.75e-05	150	95	5	2ba55e51877e2e749cccdae7df5d885dc55b2587
ToppCell	10x5'-bone_marrow-Lymphocytic_Invariant-Inducer-like-ILC3\|bone_marrow / Manually curated celltypes from each tissue	TLE1 HLF AHR TBX2 ZNF646	2.05e-05	155	95	5	83430a64c2cb5ad29caa3dacba76c28dd204ac40
ToppCell	TCGA-Ovary-Primary_Tumor-Ovarian_Carcinoma-Serous_Cystadenocarcinoma-5\|TCGA-Ovary / Sample_Type by Project: Shred V9	NFATC3 HIPK1 RPRD2 CHD2 KMT2E	2.85e-05	166	95	5	32d2eaf8a5d03881bf74d680825af2d5110b082d
ToppCell	facs-Skin-Anagen-24m-Epithelial-epidermal_cell\|Skin / Skin_Bladder_Kidney_Mammary_Gland - method, tissue, subtissue, age, lineage, cell ontology and free annotation	PRSS53 POU3F1 EMX2 BBOX1 PHF21B	2.94e-05	167	95	5	02c89069dcd0e87f7502e32b14e7cbd3cab81a09
ToppCell	5'-GW_trimst-2-LymphNode-Hematopoietic-Myeloid-Lymphoid_DC\|GW_trimst-2 / Celltypes from developing, pediatric, Crohn's, & adult GI tract	FOXD4L4 FOXD4L1 FOXD4L3 FOXD4L6 FOXD4	3.02e-05	168	95	5	6dd58fd981750da49afd53796f244e1803cce97f
ToppCell	kidney_cells-Adult_normal_reference-Epithelial-Distal_tubule_epithelial_cell-kidney_distal_convoluted_tubule_epithelial_cell-Distal_Convoluted_Tubule_Cell_Type_1\|Adult_normal_reference / Celltypes from Cells and Nuclei per compartment and clinical group	FRMD4A SEMA6D HOXD8 EMX1 PHF21B	3.47e-05	173	95	5	0c74bdb40e635d906fd180412c23bf7fed61621e
ToppCell	PBMC-Convalescent-Lymphocyte-B-B_cell-B_naive-B_activate-7\|Convalescent / Location, Disease Group, Cell group, Cell class and sub_cluster (2021.03.01)	PRSS53 TLE1 ARHGEF5 SIPA1L3 TBX6	3.77e-05	176	95	5	dde46f06f6fc3f7ba83be91a0ee6231790955e3e
ToppCell	wk_20-22-Hematologic-Myeloid-aDC_1\|wk_20-22 / Celltypes from embryonic and fetal-stage human lung	FOXD4L4 FOXD4L1 FOXD4L3 FOXD4L6 FOXD4	3.98e-05	178	95	5	fd2bdb4796e86c8cff2d25f0c730ffea21db8787
ToppCell	BAL-Mild-Myeloid-cDC-cDC-cDC_10\|Mild / Location, Disease Group, Cell group, Cell class and sub_cluster (2021.03.01)	FOXD4L4 FOXD4L1 FOXD4L3 FOXD4L5 FOXD4	4.20e-05	180	95	5	32d871738a24071b70084a7e80148a516110c78b
ToppCell	renal_medulla_nuclei-Renal_AKI_(acute_kidney_injury)-Epithelial-Proximal_tubule_epithelial_cell-kidney_proximal_tubule_epithelial_cell-Proximal_Tubule_Epithelial_Cell_Segment_1_/_Segment_2\|Renal_AKI_(acute_kidney_injury) / Celltypes from Cells and Nuclei per compartment and clinical group	MAST4 ZNF804B BBOX1 SLC39A5 GLIS1	4.20e-05	180	95	5	1363b3254470f6ff98630d1df83a1bdbacc137e0
ToppCell	BAL-Mild-Myeloid-cDC-cDC-cDC_10\|Mild / Location, Disease Group, Cell group, Cell class and sub_cluster (2021.03.09)	FOXD4L4 FOXD4L1 FOXD4L3 FOXD4L5 FOXD4	4.20e-05	180	95	5	067ca8a15228c7f3b3bc7aecbc9b1611ca05e176
ToppCell	renal_cortex_nuclei-Hypertensive_with+without-CKD-Epithelial-Proximal_tubule_epithelial_cell-kidney_proximal_tubule_epithelial_cell-Proximal_Tubule_Epithelial_Cell_Segment_1_/_Segment_2\|Hypertensive_with+without-CKD / Celltypes from Cells and Nuclei per compartment and clinical group	MAST4 ZNF804B BBOX1 SLC39A5 GLIS1	4.54e-05	183	95	5	facd6dbe0851b537d70a899ac7485714ab27d071
ToppCell	Control-Stromal_mesenchymal-Lung_smooth_muscle-MatrixFB_->_Myofibroblast\|Control / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2	SHANK1 PRSS12 GLI1 HLF PHF21B	4.54e-05	183	95	5	7eae9b3b4d1c9b135fa7cff348393d4adec474b4
ToppCell	renal_cortex_nuclei-CKD+DKD_normotensive-Epithelial-Proximal_tubule_epithelial_cell-kidney_proximal_tubule_epithelial_cell-Proximal_Tubule_Epithelial_Cell_Segment_1_/_Segment_2\|CKD+DKD_normotensive / Celltypes from Cells and Nuclei per compartment and clinical group	MAST4 SIPA1L3 ZNF804B BBOX1 GLIS1	4.91e-05	186	95	5	5784d255e9ca449d375d81938d0fbbd8a7eb44f6
ToppCell	ILEUM-inflamed-(3)_MNP-(3)_moDC\|(3)_MNP / shred on tissue, inflammation_status, cell class(v3), cell subclass (v2)	FRMD4A SELENOP AHR KMT2E JMJD1C	5.03e-05	187	95	5	0099def970fbc828756fbf853eca2ce77b8cd342
ToppCell	10x_3'_v2v3-Neoplastic-Stem-like-NPC-like-NPC-like_neural-C\|10x_3'_v2v3 / Platform, Oncotype, Lineage, Cell_class, celltype (level4), mutation group	DANCR RERE PHF21B MEIS2 LINC01558	5.16e-05	188	95	5	e239bcdbd210a398a5850cb6fbf171d402f45a4f
ToppCell	metastatic_Lymph_Node-Myeloid_cells-Undetermined\|Myeloid_cells / Location, Cell class and cell subclass	MAST4 SEMA6D SP6 ASIC4 MEIS2	5.29e-05	189	95	5	b46adb47768a7b6d801c457d7ba65508edfc36a5
ToppCell	primary_auditory_cortex_(A1C)-Non-neuronal-Macroglial\|primary_auditory_cortex_(A1C) / Sample groups (6 Anatomical region groups), with 5 level hierarchy of cell types	SELENOP CHD7 EMX2 CARNS1 OLIG2	5.29e-05	189	95	5	784ace2be87f2ecb19490f4974f63a559516e0eb
ToppCell	Anterior_Cingulate_gyrus_(CgG)-Non-neuronal-Macroglial\|Anterior_Cingulate_gyrus_(CgG) / Sample groups (6 Anatomical region groups), with 5 level hierarchy of cell types	CHD7 EMX2 CARNS1 OLIG2 PHF21B	5.43e-05	190	95	5	2de8e4cfeee350a9a76af749d6ce58d948c129b8
ToppCell	Neuron-Postmitotic-Excitatory_Neuron_-Deep_Layer-27\|World / Primary Cells by Cluster	TLE1 CHD7 RERE EMX1 EMX2	5.70e-05	192	95	5	cf989f26c0ebdc0cd12e1e41958f063e4fa3e468
ToppCell	human_hepatoblastoma-Tumor_cells\|World / Sample and Cell Type and Tumor Cluster (all cells)	HIVEP1 RBM33 HELZ RERE KMT2E	5.70e-05	192	95	5	916fbec1c7ab7969bda711886ac88e877e30c280
ToppCell	Fetal_29-31_weeks-Mesenchymal-myofibroblast_cell-D150\|Fetal_29-31_weeks / Lineage, Cell type, age group and donor	SEMA6D TLE1 HLF PHF21B TBX2	5.70e-05	192	95	5	72881b280a415e65f87a80ca1369cbb0b722a0c4
ToppCell	human_hepatoblastoma\|World / Sample and Cell Type and Tumor Cluster (all cells)	HIVEP1 RBM33 HELZ RERE KMT2E	5.84e-05	193	95	5	e6a688bc834f845ff64dae1be64f073eec5091a1
ToppCell	kidney_cells-Adult_normal_reference-Epithelial-Collecting_tubule_epithelial_cell-kidney_connecting_tubule_epithelial_cell-Connecting_Tubule_Cell\|Adult_normal_reference / Celltypes from Cells and Nuclei per compartment and clinical group	HOXD8 DANCR EMX1 EMX2 TBX2	5.84e-05	193	95	5	46d5d1f8150ebbc7f1941b96ab184491e5c1210b
ToppCell	Brain_organoid-organoid_Kanton_Nature-Organoid-2M-IPC_like\|Organoid-2M / Sample Type, Dataset, Time_group, and Cell type.	AUTS2 CHD7 EMX1 EMX2 PHF21B	6.60e-05	198	95	5	6d12ecaa9532c134d9c4562534dcb59a6420b4d3
ToppCell	Brain_organoid-organoid_Kanton_Nature-Organoid-2M-IPC_like-IPs_and_early_cortical_neurons\|Organoid-2M / Sample Type, Dataset, Time_group, and Cell type.	AUTS2 CHD7 EMX1 EMX2 PHF21B	6.60e-05	198	95	5	7943e4f67c3d6efb5c8b00aa0ff3cfe7be10c48d
ToppCell	Fetal_brain-fetalBrain_Zhong_nature-GW10\|fetalBrain_Zhong_nature / Sample Type, Dataset, Time_group, and Cell type.	TLE1 CHD7 EMX1 EMX2 PHF21B	6.75e-05	199	95	5	8e72efcd421639ac36ed036ee13f13de070d361f
ToppCell	Fetal_brain-organoid_Tanaka_cellReport-GW10\|organoid_Tanaka_cellReport / Sample Type, Dataset, Time_group, and Cell type.	TLE1 CHD7 EMX1 EMX2 PHF21B	6.92e-05	200	95	5	7c495030e6566b81d97b5516d1972e335ce5ed8c
ToppCell	mild\|World / Cohort 1 (10x PBMC) with disease condition, cell group and cell class	RBM33 HELZ CHD2 KMT2E JMJD1C	6.92e-05	200	95	5	12f1685ce8f218433068e090c9d839cd5a1910bf
ToppCell	Brain_organoid-organoid_Tanaka_cellReport-3m-Neuronal-Neuron\|3m / Sample Type, Dataset, Time_group, and Cell type.	SEMA6D CHD7 EMX1 PHF21B MEIS2	6.92e-05	200	95	5	3d134ae3c48ff4d1849db4fbe44ff73fb6c8c779
ToppCell	LPS_only-Endothelial-Endothelial-Alv_Cap\|LPS_only / Treatment groups by lineage, cell group, cell type	SELENOP TLE4 AHR ZC3H12C MEIS2	6.92e-05	200	95	5	432384faeade8e609154fab3d96c955a8ec868dd
ToppCell	Brain_organoid-organoid_Tanaka_cellReport-2m-Neuronal-Interneuron\|2m / Sample Type, Dataset, Time_group, and Cell type.	PRSS12 RERE ASIC4 KMT2E MEIS2	6.92e-05	200	95	5	08bee924a2654e05df3b39e8a51f93c8b3472175
Computational	Genes in the cancer module 123.	HIVEP1 GLI1 TLE1 POU3F1 CHD2 OLIG2 ZNF646	1.02e-04	247	48	7	MODULE_123
Drug	Benzamil hydrochloride [2898-76-2]; Up 200; 11.2uM; PC3; HT_HG-U133A	FRMD4A MAST4 ATXN1 HLF MED25 FNDC3A RERE TBX2	1.55e-06	196	94	8	3738_UP
Drug	glyphosate	FOXD4L1 FOXD4L3 GLI1 GBX2 EN1 OLIG2 GLIS1 FOXD4	3.08e-06	215	94	8	CID000003496
Disease	household income	MAST4 SEMA6D ATXN1 TLE4 CACNA1I KMT2E JMJD1C	3.58e-05	304	88	7	EFO_0009695
Disease	Drugs used in diabetes use measurement	TLE1 SP6 AUTS2 CTBP1 LTBP3 JMJD1C	1.18e-04	255	88	6	EFO_0009924
Disease	CHARGE syndrome (implicated_via_orthology)	CHD2 CHD7	1.83e-04	7	88	2	DOID:0050834 (implicated_via_orthology)
Disease	vital capacity	SELENOP AHR AUTS2 RPRD2 CHD7 LTBP3 ASIC4 KMT2E CARNS1 EN1 JMJD1C MEIS2	3.01e-04	1236	88	12	EFO_0004312
Disease	cognitive function measurement	FRMD4A HIVEP1 FAM193A MAST4 SEMA6D ATXN1 AUTS2 CACNA1I CHD2 CHD7 KMT2E JMJD1C MEIS2	3.21e-04	1434	88	13	EFO_0008354
Disease	abdominal fat cell number	SNHG28 SELENOP MAST4 KNDC1 MMP20	3.23e-04	198	88	5	EFO_0021534
Disease	schizophrenia, anorexia nervosa	SEMA6D RPRD2 RERE	4.02e-04	48	88	3	MONDO_0005090, MONDO_0005351
Disease	age at menarche	SEMA6D SKOR2 HLF SP6 FNDC3A CHD2 RERE SLX4	4.03e-04	594	88	8	EFO_0004703
Disease	intelligence, self reported educational attainment	FAM193A SEMA6D CACNA1I JMJD1C	4.24e-04	117	88	4	EFO_0004337, EFO_0004784
Disease	neutrophil percentage of leukocytes	HIVEP1 ATXN1 TLE4 HELZ CHD7 RERE ZNF831 JMJD1C	4.80e-04	610	88	8	EFO_0007990
Disease	neutrophil count, basophil count	ATXN1 ZNF316 CHD7 RERE JMJD1C	5.66e-04	224	88	5	EFO_0004833, EFO_0005090
Disease	lifestyle measurement	SEMA6D AUTS2 HELZ RSBN1L ZNF646	7.03e-04	235	88	5	EFO_0010724
Disease	lymphocyte percentage of leukocytes	HIVEP1 ATXN1 TLE4 HELZ CHD7 RERE ZNF831 JMJD1C	8.42e-04	665	88	8	EFO_0007993
Disease	preeclampsia, hypertension, pregnancy-induced	TNS2 ZNF831	1.03e-03	16	88	2	EFO_0000668, MONDO_0024664
Disease	Amelogenesis imperfecta	RELT MMP20	1.16e-03	17	88	2	cv:C0002452
Disease	chronotype measurement	HIVEP1 FAM193A SEMA6D NFATC3 SKOR2 AUTS2 RPRD2 RERE MEIS2	1.27e-03	882	88	9	EFO_0008328
Disease	Tourette syndrome, schizophrenia	CACNA1I RERE	1.30e-03	18	88	2	EFO_0004895, MONDO_0005090
Disease	coagulation factor V measurement	SELENOP MAST4	1.61e-03	20	88	2	EFO_0008087
Disease	Precursor B-cell lymphoblastic leukemia	HLF AUTS2	1.78e-03	21	88	2	C1292769
Disease	Epilepsy, Cryptogenic	IQSEC2 AUTS2 CHD2	1.91e-03	82	88	3	C0086237
Disease	response to selective serotonin reuptake inhibitor	SEMA6D BICRA AUTS2	1.91e-03	82	88	3	EFO_0005658
Disease	Awakening Epilepsy	IQSEC2 AUTS2 CHD2	1.91e-03	82	88	3	C0751111
Disease	Aura	IQSEC2 AUTS2 CHD2	1.91e-03	82	88	3	C0236018
Disease	progranulin measurement	ITGA2B GPATCH8	1.95e-03	22	88	2	EFO_0004625
Disease	platelet crit	BHLHE41 KRBA1 MAST4 TLE4 RPRD2 RERE ITGA2B GPATCH8 JMJD1C	2.14e-03	952	88	9	EFO_0007985
Disease	neutrophil count	TBX19 SELENOP HIVEP1 ATXN1 IQSEC2 ZNF316 RPRD2 CHD7 RERE KMT2E JMJD1C	2.68e-03	1382	88	11	EFO_0004833
Disease	Neurodevelopmental Disorders	IQSEC2 CHD2 KMT2E	2.74e-03	93	88	3	C1535926
Disease	alcohol use disorder (implicated_via_orthology)	AUTS2 SMARCC2 CTBP1 JMJD1C	2.80e-03	195	88	4	DOID:1574 (implicated_via_orthology)

Protein segments in the cluster

Peptide	Gene	Start	Entry
HLQPLHHPSEARPFP	AHR	826	P35869
ALNLTPSHPHPPHSL	nan	131	P0DMU3
PPRSHVPHTGLAPVH	ESX1	376	Q8N693
SLSHGLPPVAHPPHA	CTBP1	406	Q13363
PQHPHGRTHLPFAGP	BHLHE41	446	Q9C0J9
HSHPPPLALGSGLHA	ARHGEF5	756	Q12774
ALGSAPLPTHPHLPA	CFAP46	2611	Q8IYW2
LLHHHGPPWPAPSLH	CARNS1	511	A5YM72
ASPPAIPVHLHPHQT	ATXN1	261	P54253
PLQPHPGLHHQSSPP	CHD7	516	Q9P2D1
HGHVPLHTVPHLPRP	FAM193A	456	P78312
PPHPGLAVRAAALHP	DANCR	6	P0C864
LQQPPHLPAGPHAHS	RBM33	1031	Q96EV2
PAHTEAHAGPHKPSP	INSYN1	221	Q2T9L4
AHPAAHPALPTHPGH	INTS15	421	Q96N11
PHLTGPPGTAHHPVA	ARHGEF19	11	Q8IW93
RPHALQAGHTPRPHP	PRSS12	76	P56730
CHAAPPAHPLLAHTG	KRBA1	941	A5PL33
FPHAPPQAHAHPHPS	HOXD8	61	P13378
PHLAPAPAHLPSQAH	HIPK1	1096	Q86Z02
RHQLTPGAHLPHPFP	FOXD4L4	206	Q8WXT5
PGAHLPHPFPLPAAH	FOXD4L4	211	Q8WXT5
PHPFPLPAAHAALHN	FOXD4L4	216	Q8WXT5
LPAAHAALHNPHPGP	FOXD4L4	221	Q8WXT5
RHQLTPGAHLPHPFP	FOXD4L3	206	Q6VB84
PGAHLPHPFPLPAAH	FOXD4L3	211	Q6VB84
PHPFPLPAAHAALHN	FOXD4L3	216	Q6VB84
LPAAHAALHNPRPGP	FOXD4L3	221	Q6VB84
DPHAPRPIPPVHHLN	MEIS2	26	O14770
HGRHPLHQPTSPLPL	IQSEC2	1356	Q5JU85
PGTHHPALTPAPHLL	JMJD1C	751	Q15652
HHPHLLPTVLPGVPT	JMJD1C	791	Q15652
PALHRAPVFHPPIHH	JMJD1C	1201	Q15652
AIHPGPFTFHPVPHA	GPATCH8	1446	Q9UKJ3
PHPHLPVLATSGLDH	DCAF8	486	Q5TAQ9
AHHLHAAAAPPPAPP	FOXL2	296	P58012
QPAPPHISHHPSASP	AUTS2	416	Q8WXX7
PGPSLFGAIHHPHDL	AUTS2	691	Q8WXX7
GPPPHHSNFLNPAAH	AUTS2	726	Q8WXX7
HPASLDGHLPHPSLI	AUTS2	1171	Q8WXX7
EPSPPPHLGAHGHAH	POU3F1	201	Q03052
AQALHHPPHQGPPLF	KMT2E	1736	Q8IZD2
HPPHQGPPLFPSSAH	KMT2E	1741	Q8IZD2
SLHHLQPPGAPALLP	MED25	666	Q71SY5
HPSEGPPHPQPLFSH	GLI1	836	P08151
VSSLLPNHHHPHGPP	ASIC4	516	Q96FT7
QAHSPALPAPHAHAP	PRDM12	331	Q9H4Q4
GIPPSPSQHDHSPHP	HLF	96	Q16534
LPHPFPLPAAHAALH	FOXD4	211	Q12950
PLPAAHAALHNPRPG	FOXD4	216	Q12950
HHPHLQHLPQPPLGL	HELZ	1536	P42694
AAPCLPPLAHHPHLP	EN1	61	Q05925
HSPHKGLPPRPPSHN	FRMD4A	566	Q9P2Q2
GPHHSPAPHDSALPA	LINC01558	6	Q9Y6Z2
QPPTGLDPSPLHLHA	FBF1	1081	Q8TES7
QPALPPAHPHHQIPS	GBX2	71	P52951
PAHPHHQIPSLPTGF	GBX2	76	P52951
LHPQKPHLPASHGPQ	CHD2	1601	O14647
PTGHHPQPASLIPSH	FAM193B	251	Q96PV7
GSHTVLHRSPHPPLP	FNDC3A	106	Q9Y2H6
PPRAAPLHTPHAHHI	CACNA1I	1026	Q9P0X4
PALHHPPGVQLLHCI	BBOX1	206	O75936
SQHLLPHPKPSHPRP	LTBP3	256	Q9NS15
PALPRPHSPLSAHAG	MAST4	241	O15021
HQLTPGAHLPHPFPL	FOXD4L1	206	Q9NU39
GAHLPHPFPLPAAHA	FOXD4L1	211	Q9NU39
HPFPLPAAHAALHNP	FOXD4L1	216	Q9NU39
PAAHAALHNPRPGPL	FOXD4L1	221	Q9NU39
LGPTTAHHGPRHPPK	KNDC1	816	Q76NI1
HPAHQLGASPLQPPH	EMX1	131	Q04741
PHALAAHPLPSSHSP	EMX2	91	Q04743
AHPLPSSHSPHPLFA	EMX2	96	Q04743
GLLPPAHDVPSRHHP	GLIS1	416	Q8NBF1
AKPFHPPDLSWHPLH	BMP2KL	321	Q5H9B9
HQAPLGDSPHLPSPH	BICRA	781	Q9NZM4
LPSHSLEHLGPPHGG	RPRD2	1371	Q5VT52
PVDHLHLPPTPPSSH	CREB3L2	196	Q70SY1
FLGKPTLPHAPHHKP	MMP20	276	O60882
EHHHHLPLGPPQAPA	RUSC1	666	Q9BVN2
PPTLLHAQPHHLLLP	RSBN1L	131	Q6PCB5
LHGPLHPEGLSPDGH	PLEKHH3	496	Q7Z736
RHQLTPGAHLPHPFP	FOXD4L5	206	Q5VV16
PGAHLPHPFPLPAAH	FOXD4L5	211	Q5VV16
PHPFPLPAAHAALHN	FOXD4L5	216	Q5VV16
LPAAHAALHNPHPGP	FOXD4L5	221	Q5VV16
RHQLTPGAHLPHPFP	FOXD4L6	206	Q3SYB3
PGAHLPHPFPLPAAH	FOXD4L6	211	Q3SYB3
PHPFPLPAAHAALHN	FOXD4L6	216	Q3SYB3
LPAAHAALHNPHPGP	FOXD4L6	221	Q3SYB3
LSPDIPPAHSPVHSH	SIPA1L3	1676	O60292
AAHHPAVHHPILPPA	OLIG2	211	Q13516
APQAHKHPPHLSGPS	RERE	941	Q9P2R6
STHHPPSAHPPPLQL	RERE	976	Q9P2R6
VGDHQLCAPPPHPHA	SP6	156	Q3SY56
GLPIPSPSPIHPAHH	ITGA2B	871	P08514
ISINLPAPPNLHGHH	SMARCC2	1106	Q8TAQ2
APNAPTHPAPPGLHH	SELENOP	231	P49908
HPPALAPPGHQGHSH	SLC39A5	361	Q6ZMH5
HPHSSPLAPHPISGD	SLX4	1351	Q8IY92
SLYHSGPLPPAHHHP	SHANK1	986	Q9Y566
HPTTHTPLCLPQPAH	PRSS53	136	Q2L4Q9
QHLSHGHGPPVPLTP	TLE1	131	Q04724
IPAHPTFLAGHPLHL	ZNF804B	1256	A4D1E1
PRLLSSPHPATHHCP	PHF21B	191	Q96EK2
THHCPLHPSSLPLTP	PHF21B	201	Q96EK2
HVSALGPHPPAAHLR	TBX2	76	Q13207
QHLSHGHGLPVPLTP	TLE4	136	Q04727
PHATGLLSHRPCHPP	ZNF646	831	O15015
LTTPLCLPHHGLPSH	NFATC3	56	Q12968
LHPAAFHGAPSHLPT	TBX6	351	O95947
HPGLPPHLVHKLPLS	SNHG28	126	P0DPA3
PLAQHPHHRGLLSPG	SKOR2	706	Q2VWA4
PGAHHPLGTHTRALP	nan	106	Q6ZRN7
PAPPNVPHICPHRHH	RELT	266	Q969Z4
PSSHPLGFHFPVHPK	ZNF316	591	A6NFI3
LAGLHSSPPHAAPLP	UBN1	1091	Q9NPG3
PPLPHLALHLPHSAV	ZC3H12C	701	Q9C0D7
LHPAAPAPAEHPSLA	ZNF831	906	Q5JPB2
APLPLPAPHTHHGCE	TBX19	266	O60806
SSPPPHSPLSHGHIP	SEMA6D	811	Q8NFY4
PGLPSPHTHLFSHLP	HIVEP1	2371	P15822
PGHPLPLLLPACGHH	TNS2	731	Q63HR2
TPPHPSLHPVQLHGA	TTI1	1056	O43156