Cluster composition

Functions

CategoryNameIntersectionWithQueryPValueGenesInTermGenesInQueryGenesInTermInQueryID
GeneOntologyMolecularFunctionaspartic-type endopeptidase activity

ERVK-6 ERVK-8 ERVK-18 ERVK-19 ERVK-7 ERVK-21 ERVK-25 ERVK-9 ERVK-24

7.75e-1437939GO:0004190
GeneOntologyMolecularFunctionaspartic-type peptidase activity

ERVK-6 ERVK-8 ERVK-18 ERVK-19 ERVK-7 ERVK-21 ERVK-25 ERVK-9 ERVK-24

1.01e-1338939GO:0070001
GeneOntologyMolecularFunctionRNA-directed DNA polymerase activity

ERVK-6 ERVK-8 ERVK-7 TEP1

4.26e-0714934GO:0003964
GeneOntologyMolecularFunctionhydroxymethyl-, formyl- and related transferase activity

AMT GART SHMT2

5.39e-068933GO:0016742
GeneOntologyMolecularFunctionRNA-DNA hybrid ribonuclease activity

ERVK-6 ERVK-8 ERVK-7

1.57e-0511933GO:0004523
GeneOntologyMolecularFunctionDNA polymerase activity

ERVK-6 ERVK-8 ERVK-7 TEP1

2.88e-0538934GO:0034061
GeneOntologyMolecularFunctionendopeptidase activity

ERVK-6 ERVK-8 ERVK-18 TASP1 ERVK-19 ERVK-7 ERVK-21 ERVK-25 ERVK-9 ERVK-24

3.17e-054309310GO:0004175
GeneOntologyMolecularFunctionATP hydrolysis activity

ATP5F1D KIF26A MYO9B DHX38 MACF1 DDX3Y MCM5 DDX41 DNAH6 ATP4A

3.93e-054419310GO:0016887
GeneOntologyMolecularFunctionmicrotubule minus-end binding

TUBGCP6 MACF1 CAMSAP2

4.27e-0515933GO:0051011
GeneOntologyMolecularFunctionRNA stem-loop binding

ERVK-6 ERVK-8 ERVK-7

1.22e-0421933GO:0035613
GeneOntologyMolecularFunctionATP-dependent activity

ATP5F1D KIF26A MYO9B DHX38 MACF1 DDX3Y MCM5 MSH5 DDX41 DNAH6 ATP4A

1.32e-046149311GO:0140657
GeneOntologyMolecularFunctionpeptidase activity

ERVK-6 USP42 ERVK-8 ERVK-18 TASP1 ERVK-19 ERVK-7 ERVK-21 ERVK-25 ERVK-9 ERVK-24

2.28e-046549311GO:0008233
GeneOntologyMolecularFunctionligand-gated monoatomic cation channel activity

GRIN2D CCDC51 CHRNA4 CHRNG TMEM63A

5.00e-04140935GO:0099094
GeneOntologyMolecularFunctionRNA endonuclease activity, producing 5'-phosphomonoesters

ERVK-6 ERVK-8 ERVK-7

6.78e-0437933GO:0016891
GeneOntologyMolecularFunctionnucleotidyltransferase activity

ERVK-6 ERVK-8 ERVK-7 TEP1 GMPPB

7.26e-04152935GO:0016779
GeneOntologyMolecularFunctioncatalytic activity, acting on a nucleic acid

ERVK-6 DHX38 ERVK-8 DDX3Y MCM5 ERVK-7 MSH5 TEP1 DDX41 WARS2

8.37e-046459310GO:0140640
GeneOntologyMolecularFunctionmagnesium ion binding

ENOSF1 IDH3B ENO2 ATP4A PGM1 MVK

1.05e-03247936GO:0000287
GeneOntologyMolecularFunctionendonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters

ERVK-6 ERVK-8 ERVK-7

1.28e-0346933GO:0016893
GeneOntologyMolecularFunctiontransferase activity, transferring phosphorus-containing groups

ANKK1 ERVK-6 NPR1 PNKP ERVK-8 MAGI3 ERVK-7 LRRK1 TEP1 GMPPB CERT1 MVK

1.35e-039389312GO:0016772
GeneOntologyMolecularFunctioncatalytic activity, acting on DNA

ERVK-6 ERVK-8 MCM5 ERVK-7 MSH5 TEP1

1.42e-03262936GO:0140097
GeneOntologyMolecularFunctionligand-gated monoatomic ion channel activity

GRIN2D CCDC51 CHRNA4 CHRNG TMEM63A

2.09e-03193935GO:0015276
GeneOntologyMolecularFunctionligand-gated channel activity

GRIN2D CCDC51 CHRNA4 CHRNG TMEM63A

2.29e-03197935GO:0022834
GeneOntologyMolecularFunctiontransmitter-gated monoatomic ion channel activity involved in regulation of postsynaptic membrane potential

GRIN2D CHRNA4 CHRNG

2.39e-0357933GO:1904315
GeneOntologyMolecularFunctionneurotransmitter receptor activity involved in regulation of postsynaptic membrane potential

GRIN2D CHRNA4 CHRNG

2.76e-0360933GO:0099529
GeneOntologyMolecularFunctionacetylcholine-gated monoatomic cation-selective channel activity

CHRNA4 CHRNG

2.79e-0317932GO:0022848
GeneOntologyMolecularFunctionzinc ion binding

ERVK-6 EHMT2 MYO9B ERVK-8 ERVK-19 ERVK-7 ERVK-21 ERVK-9 ERVK-24 ZCCHC3 WDFY1

2.84e-038919311GO:0008270
GeneOntologyMolecularFunctionribonucleoside triphosphate phosphatase activity

ATP5F1D KIF26A MYO9B DHX38 MACF1 DDX3Y MCM5 DDX41 DNAH6 ATP4A

3.24e-037759310GO:0017111
GeneOntologyMolecularFunctioncatalytic activity, acting on RNA

ERVK-6 DHX38 ERVK-8 DDX3Y ERVK-7 DDX41 WARS2

3.34e-03417937GO:0140098
GeneOntologyMolecularFunctiontransmitter-gated channel activity

GRIN2D CHRNA4 CHRNG

3.47e-0365933GO:0022835
GeneOntologyMolecularFunctiontransmitter-gated monoatomic ion channel activity

GRIN2D CHRNA4 CHRNG

3.47e-0365933GO:0022824
GeneOntologyMolecularFunctionendonuclease activity

ERVK-6 PNKP ERVK-8 ERVK-7

3.76e-03136934GO:0004519
GeneOntologyMolecularFunctionacetylcholine receptor activity

CHRNA4 CHRNG

5.09e-0323932GO:0015464
GeneOntologyMolecularFunctionpostsynaptic neurotransmitter receptor activity

GRIN2D CHRNA4 CHRNG

5.18e-0375933GO:0098960
GeneOntologyMolecularFunctionmonoatomic cation channel activity

ATP5F1D GRIN2D CCDC51 CHRNA4 CHRNG TMEM63A

5.36e-03343936GO:0005261
GeneOntologyMolecularFunctionextracellular ligand-gated monoatomic ion channel activity

GRIN2D CHRNA4 CHRNG

5.58e-0377933GO:0005230
GeneOntologyMolecularFunctionpyrophosphatase activity

ATP5F1D KIF26A MYO9B DHX38 MACF1 DDX3Y MCM5 DDX41 DNAH6 ATP4A

5.64e-038399310GO:0016462
GeneOntologyMolecularFunctionhydrolase activity, acting on acid anhydrides

ATP5F1D KIF26A MYO9B DHX38 MACF1 DDX3Y MCM5 DDX41 DNAH6 ATP4A

5.69e-038409310GO:0016817
GeneOntologyMolecularFunctionhydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides

ATP5F1D KIF26A MYO9B DHX38 MACF1 DDX3Y MCM5 DDX41 DNAH6 ATP4A

5.69e-038409310GO:0016818
GeneOntologyMolecularFunctionRNA helicase activity

DHX38 DDX3Y DDX41

5.78e-0378933GO:0003724
GeneOntologyMolecularFunctionRNA endonuclease activity

ERVK-6 ERVK-8 ERVK-7

5.99e-0379933GO:0004521
GeneOntologyMolecularFunctionATP-dependent activity, acting on RNA

DHX38 DDX3Y DDX41

6.20e-0380933GO:0008186
GeneOntologyMolecularFunctionhelicase activity

DHX38 DDX3Y MCM5 DDX41

6.39e-03158934GO:0004386
GeneOntologyMolecularFunctiontransaminase activity

ABAT AMT

6.49e-0326932GO:0008483
GeneOntologyBiologicalProcesscell-cell fusion

ERVK-6 ERVK-8 ERVK-19 ERVK-21 ERVK-9 PTGFRN

2.50e-0685946GO:0140253
GeneOntologyBiologicalProcesssyncytium formation by plasma membrane fusion

ERVK-6 ERVK-8 ERVK-19 ERVK-21 ERVK-9 PTGFRN

2.50e-0685946GO:0000768
GeneOntologyBiologicalProcesssyncytium formation

ERVK-6 ERVK-8 ERVK-19 ERVK-21 ERVK-9 PTGFRN

3.27e-0689946GO:0006949
GeneOntologyBiologicalProcessDNA integration

ERVK-6 ERVK-8 ERVK-7

2.54e-0513943GO:0015074
GeneOntologyBiologicalProcessRNA-templated DNA biosynthetic process

ERVK-6 PNKP ERVK-8 ERVK-7 TEP1

3.87e-0583945GO:0006278
GeneOntologyBiologicalProcessglycine metabolic process

AMT GART SHMT2

8.42e-0519943GO:0006544
DomainP-loop_NTPase

PNKP KIF26A MYO9B DHX38 MAGI3 DDX3Y MCM5 IQCN MSH5 LRRK1 TEP1 DDX41 DNAH6

8.84e-058488313IPR027417
DomainZnF_C2HC

ERVK-6 FAM90A7 DDX41 ZCCHC3

1.04e-0455834SM00343
DomainZnf_CCHC

ERVK-6 FAM90A7 DDX41 ZCCHC3

1.04e-0455834IPR001878
Domain-

ENOSF1 ENO2

1.16e-0448323.30.390.10
DomainEnolase_C-like

ENOSF1 ENO2

1.16e-044832IPR029065
Domain-

ENOSF1 ENO2

1.16e-0448323.20.20.120
DomainEnolase_N-like

ENOSF1 ENO2

1.16e-044832IPR029017
DomainQuino_amine_DH_bsu

NBAS LRRK1 TEP1

1.23e-0422833IPR011044
Domainzf-CCHC

ERVK-6 DDX41 ZCCHC3

1.41e-0423833PF00098
DomainZF_CCHC

ERVK-6 DDX41 ZCCHC3

5.00e-0435833PS50158
Domain-

NBAS WDCP PEX7 TEP1 WDR13 PLXNB3 WDFY1

7.00e-043338372.130.10.10
DomainWD40/YVTN_repeat-like_dom

NBAS WDCP PEX7 TEP1 WDR13 PLXNB3 WDFY1

7.25e-04335837IPR015943
DomainWD_REPEATS_1

NBAS WDCP PEX7 TEP1 WDR13 WDFY1

1.49e-03278836PS00678
DomainWD_REPEATS_2

NBAS WDCP PEX7 TEP1 WDR13 WDFY1

1.52e-03279836PS50082
DomainWD_REPEATS_REGION

NBAS WDCP PEX7 TEP1 WDR13 WDFY1

1.52e-03279836PS50294
DomainNicotinic_acetylcholine_rcpt

CHRNA4 CHRNG

2.25e-0316832IPR002394
Domain-

FLNA MACF1 CAMSAP2

3.89e-03718331.10.418.10
DomainDEAD/DEAH_box_helicase_dom

DHX38 DDX3Y DDX41

4.21e-0373833IPR011545
DomainCH

FLNA MACF1 CAMSAP2

4.21e-0373833PS50021
DomainDEAD

DHX38 DDX3Y DDX41

4.21e-0373833PF00270
DomainCH-domain

FLNA MACF1 CAMSAP2

4.54e-0375833IPR001715
DomainActinin_actin-bd_CS

FLNA MACF1

4.65e-0323832IPR001589
Domain-

CHRNA4 CHRNG

4.65e-03238321.20.120.370
DomainAcetylcholine_rcpt_TM

CHRNA4 CHRNG

4.65e-0323832IPR027361
DomainACTININ_2

FLNA MACF1

4.65e-0323832PS00020
DomainACTININ_1

FLNA MACF1

4.65e-0323832PS00019
Domain-

PNKP DHX38 DDX3Y MCM5 MSH5 LRRK1 TEP1 DDX41 DNAH6

5.80e-037468393.40.50.300
DomainRho_GTPase_activation_prot

MYO9B PLXNB3 ARHGAP33

7.08e-0388833IPR008936
DomainDEAD_ATP_HELICASE

DDX3Y DDX41

8.35e-0331832PS00039
PathwayWP_ONECARBON_METABOLISM

AMT EHMT2 GART SHMT2

1.34e-0534614MM15859
PathwayKEGG_ONE_CARBON_POOL_BY_FOLATE

AMT GART SHMT2

5.02e-0517613M12039
Pubmed

Quantitation of HERV-K env gene expression and splicing in human breast cancer.

ERVK-6 ERVK-18 ERVK-19 ERVK-7 ERVK-21

1.37e-13595512629516
Pubmed

A revised nomenclature for transcribed human endogenous retroviral loci.

ERVK-6 ERVK-8 ERVK-18 ERVK-19 ERVK-7 ERVK-21 ERVK-25 ERVK-9 ERVK-24

5.05e-129495921542922
Pubmed

Genomewide screening for fusogenic human endogenous retrovirus envelopes identifies syncytin 2, a gene conserved on primate evolution.

ERVK-6 ERVK-8 ERVK-19 ERVK-21 ERVK-9

1.07e-101295514557543
Pubmed

Expression patterns of transcribed human endogenous retrovirus HERV-K(HML-2) loci in human tissues and the need for a HERV Transcriptome Project.

ERVK-18 ERVK-21 ERVK-25 ERVK-9 ERVK-24

1.14e-091895518664271
Pubmed

Genome-wide screening, cloning, chromosomal assignment, and expression of full-length human endogenous retrovirus type K.

ERVK-6 ERVK-18 ERVK-19

1.97e-08395310516026
Pubmed

Many human endogenous retrovirus K (HERV-K) proviruses are unique to humans.

ERVK-6 ERVK-7 ERVK-24

7.88e-08495310469592
Pubmed

Human endogenous retrovirus HERV-K(HML-2) proviruses with Rec protein coding capacity and transcriptional activity.

ERVK-6 ERVK-19 ERVK-9

3.93e-07695315063128
Pubmed

Survey of human genes of retroviral origin: identification and transcriptome of the genes with coding capacity for complete envelope proteins.

ERVK-6 ERVK-19 ERVK-21

2.34e-061095312970426
Pubmed

Spermatogenesis-specific association of SMCY and MSH5.

MSH5 KDM5D

7.38e-06295218459961
Pubmed

Expression of human endogenous retrovirus type K envelope glycoprotein in insect and mammalian cells.

ERVK-6 ERVK-19

7.38e-0629529060628
Pubmed

Evolutionary relationships within a subgroup of HERV-K-related human endogenous retroviruses.

ERVK-6 ERVK-19

7.38e-0629529460924
Pubmed

Interferon-alpha-induced endogenous superantigen. a model linking environment and autoimmunity.

ERVK-6 ERVK-18

7.38e-06295211672541
Pubmed

A high-throughput approach for measuring temporal changes in the interactome.

FKBP10 FLNA DHX38 GART SHMT2 MACF1 MCM5 NMT1 GMPPB CERT1 ENO2 PDCD4 MVK GABPA COPS7A

9.29e-061455951522863883
Pubmed

Fibril treatment changes protein interactions of tau and α-synuclein in human neurons.

FLNA ABAT AMT PNKP DHX38 MACF1 MCM5 IDH3B ENO2

9.30e-0649895936634849
Pubmed

A dual-activity topoisomerase complex regulates mRNA translation and turnover.

FLNA KIF26A MYO9B BICRA DOCK9 CCDC3 TASP1 PDZD8 MCM5 LRRK1 GRIN2D TEP1 ARHGAP33

9.81e-061105951335748872
Pubmed

Population genetic implications from sequence variation in four Y chromosome genes.

DDX3Y KDM5D

2.21e-05395210861003
Pubmed

Identification of an active reverse transcriptase enzyme encoded by a human endogenous HERV-K retrovirus.

ERVK-6 ERVK-9

2.21e-0539529971820
Pubmed

Mutual regulation between OGT and XIAP to control colon cancer cell growth and invasion.

FKBP10 PNKP GART SHMT2 DDX41 PDCD4 TFDP1 PGM1 ZCCHC3 GABPA

2.33e-05704951032994395
Pubmed

Systematic identification of SH3 domain-mediated human protein-protein interactions by peptide array target screening.

DLGAP2 FLNA ABAT EHMT2 BICRA GRIN2D DDX41

3.45e-0532995717474147
Pubmed

Construction of long-transcript enriched cDNA libraries from submicrogram amounts of total RNAs by a universal PCR amplification method.

FLNA DOCK9 DHX38 SHMT2 MACF1 DDX3Y TACC2 MSH5 NMT1 PGM1 WDFY1 COPS7A

4.01e-051084951211544199
Pubmed

Human endogenous retrovirus K10: expression of Gag protein and detection of antibodies in patients with seminomas.

ERVK-6 ERVK-19

4.41e-0549527983737
Pubmed

SLFN11 promotes CDT1 degradation by CUL4 in response to replicative DNA damage, while its absence leads to synthetic lethality with ATR/CHK1 inhibitors.

FLNA NUP210 MCM5 MSH5 DDX41 PDCD4

6.62e-0525095633536335
Pubmed

Transcriptionally active HERV-K genes: identification, isolation, and chromosomal mapping.

ERVK-6 ERVK-7

7.34e-05595211401426
Pubmed

The aminopeptidase ERAAP shapes the peptide repertoire displayed by major histocompatibility complex class I molecules.

DDX3Y KDM5D

7.34e-05595216299505
Pubmed

Defining the membrane proteome of NK cells.

TUBGCP6 NBAS FLNA PNKP MYO9B DOCK9 DHX38 NUP210 PDZD8 DDX3Y MCM5 DDX41

8.17e-051168951219946888
Pubmed

Assembly of the U5 snRNP component PRPF8 is controlled by the HSP90/R2TP chaperones.

FLNA DHX38 GART SHMT2 MACF1 MCM5 TACC2 IDH3B CCDC51 DDX41 NMT1 WARS2 PDCD4

1.24e-041415951328515276
Pubmed

The DNA sequence and biology of human chromosome 19.

ATP5F1D ERVK-6 PNKP ERVK-19 ATP4A ARHGAP33

1.33e-0428495615057824
Pubmed

A protein-interaction network of interferon-stimulated genes extends the innate immune system landscape.

ATP5F1D NBAS FLNA PNKP IRF2BP1 NUP210 SHMT2 MCM5 IDH3B DDX41 PTGFRN ERLEC1 PDCD4

1.48e-041440951330833792
Pubmed

The mouse Y chromosome interval necessary for spermatogonial proliferation is gene dense with syntenic homology to the human AZFa region.

DDX3Y KDM5D

1.54e-0479529736773
Pubmed

The E3 ubiquitin ligase UBR5 interacts with the H/ACA ribonucleoprotein complex and regulates ribosomal RNA biogenesis in embryonic stem cells.

PMEL DDX41 NMT1 ZCCHC3

1.95e-0410495431365120
Pubmed

Systematic bromodomain protein screens identify homologous recombination and R-loop suppression pathways involved in genome integrity.

TUBGCP6 DCDC1 EHMT2 BICRA MACF1 IDH3B TEP1 DDX41 WDR13 TFDP1 ARHGAP33

2.36e-041116951131753913
Pubmed

FBW7 suppresses ovarian cancer development by targeting the N6-methyladenosine binding protein YTHDF2.

FLNA EHMT2 MYO9B GART MACF1 IDH3B DDX41 NMT1

2.47e-0460195833658012
Pubmed

Immunoaffinity profiling of tyrosine phosphorylation in cancer cells.

FLNA GART DDX3Y ENO2 PDCD4 ZCCHC3

2.84e-0432795615592455
Pubmed

The HIV-1 Tat protein recruits a ubiquitin ligase to reorganize the 7SK snRNP for transcriptional activation.

ATP5F1D FLNA DOCK9 NUP210 MACF1 DDX3Y MCM5 DDX41 ENO2 ATP4A ZCCHC3

3.11e-041153951129845934
Pubmed

A complex with chromatin modifiers that occupies E2F- and Myc-responsive genes in G0 cells.

EHMT2 TFDP1

3.28e-041095212004135
Pubmed

Defining the human deubiquitinating enzyme interaction landscape.

FLNA USP42 DHX38 SHMT2 MAGI3 MCM5 DDX41 CERT1 PDCD4 COPS7A

4.27e-041005951019615732
Pubmed

Substrate trapping proteomics reveals targets of the βTrCP2/FBXW11 ubiquitin ligase.

TUBGCP6 MAGI3 PDCD4 COPS7A

4.30e-0412895425332235
Pubmed

The proximal proteome of 17 SARS-CoV-2 proteins links to disrupted antiviral signaling and host translation.

FKBP10 IRF2BP1 NUP210 SHMT2 PDZD8 DDX41 NMT1 ERLEC1 GABPA COPS7A

4.33e-041007951034597346
Pubmed

Analysis of the gene-dense major histocompatibility complex class III region and its comparison to mouse.

EHMT2 C4A MSH5

4.67e-045595314656967
Pubmed

N-Terminomics for the Identification of In Vitro Substrates and Cleavage Site Specificity of the SARS-CoV-2 Main Protease.

FLNA EHMT2 GART MACF1 PGM1 GABPA

4.73e-0436095633111431
Pubmed

Rescuing the aberrant sex development of H3K9 demethylase Jmjd1a-deficient mice by modulating H3K9 methylation balance.

EHMT2 DDX3Y

4.79e-041295228949961
Pubmed

The role of Dby mRNA in early development of male mouse zygotes.

DDX3Y KDM5D

4.79e-041295220543856
Pubmed

Multiple cholinergic nicotinic receptor genes affect nicotine dependence risk in African and European Americans.

CHRNA4 CHRNG

4.79e-041295220584212
Pubmed

Identifying biological pathways that underlie primordial short stature using network analysis.

FLNA IRF2BP1 MYO9B NUP210 GART SHMT2 MACF1 MCM5 IDH3B DDX41

4.94e-041024951024711643
Pubmed

Quantitative Proteomics Reveals Dynamic Interactions of the Minichromosome Maintenance Complex (MCM) in the Cellular Response to Etoposide Induced DNA Damage.

FLNA MYO9B GART SLC17A4 MACF1 DDX3Y MCM5 C4A NMT1

5.11e-0484495925963833
Pubmed

Genetic and Proteomic Interrogation of Lower Confidence Candidate Genes Reveals Signaling Networks in β-Catenin-Active Cancers.

FLNA PNKP MYO9B GART SHMT2 DDX3Y MCM5 IDH3B GMPPB CAMSAP2 PDCD4

5.99e-041247951127684187
Pubmed

Design and expression of human alpha7 nicotinic acetylcholine receptor extracellular domain mutants with enhanced solubility and ligand-binding properties.

CHRNA4 CHRNG

6.58e-041495219059502
Pubmed

Genome-wide CRISPR screen identifies HNRNPL as a prostate cancer dependency regulating RNA splicing.

ENOSF1 ABAT BICRA NUP210 MAGI3 MACF1 IQCN MSH5 TEP1 WDR13 CERT1 TMEM63A

7.44e-041489951228611215
Pubmed

Analysis of nicotinic acetylcholine receptor subunits in the cochlea of the mouse.

CHRNA4 CHRNG

7.57e-04159528838678
Pubmed

TTF-1/NKX2-1 binds to DDB1 and confers replication stress resistance to lung adenocarcinomas.

PNKP IRF2BP1 NUP210 TEAD1

8.20e-0415295428192407
Pubmed

The mouse as a model for the effects of MHC genes on human disease.

EHMT2 C4A MSH5

8.33e-046795310871872
Pubmed

Multiple distinct risk loci for nicotine dependence identified by dense coverage of the complete family of nicotinic receptor subunit (CHRN) genes.

CHRNA4 CHRNG

8.64e-041695219259974
Pubmed

Y Chromosome Infertility

DDX3Y KDM5D

8.64e-041695220301513
Pubmed

Characterization of SARS-CoV-2 proteins reveals Orf6 pathogenicity, subcellular localization, host interactions and attenuation by Selinexor.

ATP5F1D FLNA NUP210 GART NMT1 TFDP1

9.07e-0440895633766124
Pubmed

BAP1 regulation of the key adaptor protein NCoR1 is critical for γ-globin gene repression.

FLNA USP42 DHX38 GART SHMT2 DDX3Y MCM5 DDX41 PDCD4 ZCCHC3 GABPA

9.43e-041318951130463901
Pubmed

Network-driven discovery yields new insight into Shox2-dependent cardiac rhythm control.

FKBP10 CCDC3

9.78e-041795233706013
Pubmed

Association analysis of 3p21 with Crohn's disease in a New Zealand population.

AMT GMPPB

9.78e-041795220307617
Pubmed

Novel, gel-free proteomics approach identifies RNF5 and JAMP as modulators of GPCR stability.

FLNA NUP210 SHMT2 IDH3B

9.92e-0416095423798571
Pubmed

N-Terminal Acetyltransferase Naa40p Whereabouts Put into N-Terminal Proteoform Perspective.

FLNA DHX38 GART SHMT2 MACF1 TACC2 NMT1 CAMSAP2 PDCD4

1.05e-0393495933916271
Pubmed

Sex differences in sex chromosome gene expression in mouse brain.

DDX3Y KDM5D

1.10e-031895212023983
Pubmed

Proteomic profiling of VCP substrates links VCP to K6-linked ubiquitylation and c-Myc function.

FLNA MYO9B DHX38 GART SHMT2 MACF1 MCM5 IDH3B DDX41 GMPPB WDR13

1.16e-031353951129467282
Pubmed

Tumor suppressor BAP1 nuclear import is governed by transportin-1.

FKBP10 FLNA GART SHMT2 MACF1 MCM5 DDX41 NMT1 ENO2 PGM1

1.19e-031149951035446349
Pubmed

Interactomic analysis reveals a homeostatic role for the HIV restriction factor TRIM5α in mitophagy.

ABAT SHMT2 IDH3B CCDC51 PGM1

1.26e-0329295535545034
Pubmed

Nonsyndromic Retinitis Pigmentosa Overview

DHX38 IDH3B MVK

1.44e-038195320301590
Pubmed

Proteomic identification of common SCF ubiquitin ligase FBXO6-interacting glycoproteins in three kinds of cells.

NUP210 GART DDX3Y MCM5 PTGFRN ERLEC1 COPS7A

1.48e-0361395722268729
Pubmed

A multiprotein complex necessary for both transcription and DNA replication at the β-globin locus.

SHMT2 MCM5

1.50e-032195220808282
Pubmed

Unassembled CD147 is an endogenous endoplasmic reticulum-associated degradation substrate.

NUP210 ERLEC1

1.50e-032195223097496
Pubmed

ARHGAP24 represses β-catenin transactivation-induced invasiveness in hepatocellular carcinoma mainly by acting as a GTPase-independent scaffold.

GART DDX3Y MCM5 NMT1 ENO2 PGM1

1.51e-0345195636168627
Pubmed

Enhancer Activity Requires CBP/P300 Bromodomain-Dependent Histone H3K27 Acetylation.

GART MCM5 C4A PDCD4

1.53e-0318095430110629
Pubmed

EZH2 interacts with HP1BP3 to epigenetically activate WNT7B that promotes temozolomide resistance in glioblastoma.

ATP5F1D FLNA SHMT2 DDX3Y PMEL IDH3B KDM5D ENO2

1.62e-0380395836517590
Pubmed

Mammalian BTBD12/SLX4 assembles a Holliday junction resolvase and is required for DNA repair.

FKBP10 WDCP COPS7A

1.66e-038595319596235
Pubmed

Loss of ER retention motif of AGR2 can impact mTORC signaling and promote cancer metastasis.

NBAS FLNA GART SHMT2 MACF1 IQCN NMT1 EPG5

1.67e-0380795830575818
Pubmed

Analysis of the multi-copy gene family FAM90A as a copy number variant in different ethnic backgrounds.

FAM90A2P FAM90A7

1.80e-032395218602769
Pubmed

PINK1 Content in Mitochondria is Regulated by ER-Associated Degradation.

FLNA NUP210 GART MCM5 C4A DDX41

2.00e-0347795631300519
Pubmed

Functional proteomics establishes the interaction of SIRT7 with chromatin remodeling complexes and expands its role in regulation of RNA polymerase I transcription.

FLNA DHX38 NUP210 GART MACF1 MCM5 ZCCHC3

2.12e-0365395722586326
Pubmed

Proteome analysis of schizophrenia patients Wernicke's area reveals an energy metabolism dysregulation.

MACF1 ENO2

2.13e-032595219405953
Pubmed

Xrcc4 physically links DNA end processing by polynucleotide kinase to DNA ligation by DNA ligase IV.

PNKP MCM5

2.13e-032595215385968
Pubmed

Characterization and evolution of the novel gene family FAM90A in primates originated by multiple duplication and rearrangement events.

FAM90A2P FAM90A7

2.13e-032595217684299
Pubmed

Impaired OTUD7A-dependent Ankyrin regulation mediates neuronal dysfunction in mouse and human models of the 15q13.3 microdeletion syndrome.

DLGAP2 MAGI3 MACF1 CAMSAP2

2.13e-0319795436604605
Pubmed

Requirement for the Mitochondrial Pyruvate Carrier in Mammalian Development Revealed by a Hypomorphic Allelic Series.

IDH3B ENO2 PGM1

2.14e-039395327215380
Pubmed

Genome-wide YFP fluorescence complementation screen identifies new regulators for telomere signaling in human cells.

DHX38 ENO2 NAIF1 PGM1 MVK

2.15e-0333095521044950
Pubmed

A human MAP kinase interactome.

FLNA KIF26A BICRA MACF1 C4A ARHGAP33

2.20e-0348695620936779
Pubmed

A mitochondrial protein compendium elucidates complex I disease biology.

ATP5F1D TMTC1 ABAT AMT SHMT2 IDH3B CCDC51 GMPPB WARS2

2.28e-03104795918614015
Pubmed

Targeting USP10 induces degradation of oncogenic ANLN in esophageal squamous cell carcinoma.

FLNA DHX38 NUP210 GART MCM5 DDX41 NMT1 ATP4A PDCD4 ZCCHC3

2.30e-031257951036526897
Pubmed

LRRC31 inhibits DNA repair and sensitizes breast cancer brain metastasis to radiation therapy.

NBAS FLNA MYO9B NUP210

2.33e-0320295433005030
Pubmed

Prediction of the coding sequences of mouse homologues of KIAA gene: IV. The complete nucleotide sequences of 500 mouse KIAA-homologous cDNAs identified by screening of terminal sequences of cDNA clones randomly sampled from size-fractionated libraries.

DHX38 NUP210 MAGI3 MACF1 PTGFRN TMEM63A

2.36e-0349395615368895
Pubmed

Affinity purification strategies for proteomic analysis of transcription factor complexes.

MCM5 C4A DDX41

2.42e-039795323937658
Pubmed

A human skeletal muscle interactome centered on proteins involved in muscular dystrophies: LGMD interactome.

ATP5F1D EHMT2 DOCK9 MACF1 TEAD1 PGM1

2.46e-0349795623414517
Pubmed

A High-Density Human Mitochondrial Proximity Interaction Network.

ATP5F1D NBAS EHMT2 SHMT2 PDZD8 TACC2 IDH3B CCDC51 DDX41 WARS2 ZCCHC3

2.56e-031496951132877691
CytobandYq11

DDX3Y KDM5D

2.70e-0412942Yq11
GeneFamilyCholinergic receptors nicotinic subunits

CHRNA4 CHRNG

8.43e-0416492173
ToppCell356C-Lymphocytic-CD8+_Cytotoxic_T-cell-CD8+_Cytotoxic_T_cell_6|Lymphocytic / Donor, Lineage, Cell class and subclass (all cells)

TUBGCP6 AMT CD14 IRF2BP1 EPG5

1.86e-05172845a9e13aa36087170dadca421ba9de588e5a1cf715
ToppCelldroplet-Marrow-BM-1m-Lymphocytic-NK_cell|Marrow / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation

TUBGCP6 BICRA DNAH6 NAIF1 WDFY1

2.02e-05175845c1c722db42da9b8a2a46e516ddb83d9be5e2e504
ToppCell356C-Lymphocytic-CD8+_Cytotoxic_T-cell-CD8+_Cytotoxic_T_cell_6|CD8+_Cytotoxic_T-cell / Donor, Lineage, Cell class and subclass (all cells)

TUBGCP6 AMT CD14 IRF2BP1 EPG5

2.02e-05175845f3a68aeb79c4935006e17a5ff3445a8ec0e33f5f
ToppCellwk_15-18-Mesenchymal-Myofibro_&_SMC-Early_airway_SMC_2|wk_15-18 / Celltypes from embryonic and fetal-stage human lung

FLNA TMTC1 CCDC3 C4A TACC2

2.51e-05183845a1d4f25e13f5b9e92a9ca0a804a7bed5df8fb2fe
ToppCellCOPD-Multiplet-Multiplet|COPD / Disease state, Lineage and Cell class

DCDC1 MACF1 TACC2 TEAD1 DNAH6

3.48e-05196845af4cdc61830685a888a1209826c23bcf54a43084
ToppCellCOPD-Multiplet|COPD / Disease state, Lineage and Cell class

DCDC1 MACF1 TACC2 TEAD1 DNAH6

3.48e-051968456d02d494196e3f857d53eea46d9419690d43beca
ToppCelldroplet-Heart-HEART|Heart / Tongue_Heart_Limb_Muscle_Aorta_Diaphragm - method, tissue, subtissue, age, lineage, cell ontology and free annotation

ATP5F1D FKBP10 CCDC3 DDX3Y WDFY1

3.57e-051978459654472f1d4c9a6caadf1ff61a84902d171e9eb4
ToppCelldroplet-Heart-HEART-1m|Heart / Tongue_Heart_Limb_Muscle_Aorta_Diaphragm - method, tissue, subtissue, age, lineage, cell ontology and free annotation

ATP5F1D FKBP10 CCDC3 DDX3Y WDFY1

3.57e-051978451ec3c05a5d4163df2cf0d168e28a3f1d35364da2
ToppCellStriatum-Macroglia-POLYDENDROCYTE-P1-P1_2|Striatum / BrainAtlas - Mouse McCarroll V32

C4A PMEL PDCD4 PLXNB3

3.57e-05988447a62a77ca83153dacff4d02d6e32104227d0980d
ToppCellStriatum-Macroglia-POLYDENDROCYTE-P1-P1_2-Tnr-Polydendrocye.Tnr.Pdgfa_(Pdgfa)|Striatum / BrainAtlas - Mouse McCarroll V32

C4A PMEL PDCD4 PLXNB3

3.57e-059884426250ea4171a0557a67505839cf79d3fe4d9d41a
ToppCellStriatum-Macroglia-POLYDENDROCYTE-P1-P1_2-Tnr|Striatum / BrainAtlas - Mouse McCarroll V32

C4A PMEL PDCD4 PLXNB3

3.57e-059884442875d16ae9fcbaf988cd71be82568f2f862f2dd
DiseaseImmunologic Deficiency Syndromes

NBAS C4A EPG5

3.78e-0523843C0021051
Diseaseasparagine measurement

KIF26A ANKDD1B CERT1

2.19e-0441843EFO_0009766
Diseaseautism

MYO9B DDX3Y KDM5D

3.51e-0448843EFO_0003758
Diseaseceliac disease (is_implicated_in)

CD14 MYO9B

3.55e-0410842DOID:10608 (is_implicated_in)
Diseasesyndromic intellectual disability (implicated_via_orthology)

PDZD8 KDM5D

9.36e-0416842DOID:0050888 (implicated_via_orthology)
DiseaseSpermatogenic Failure, Nonobstructive, Y-Linked

DDX3Y KDM5D

9.36e-0416842C1839071
DiseaseSPERMATOGENIC FAILURE, Y-LINKED, 2

DDX3Y KDM5D

9.36e-0416842415000
DiseaseSpermatogenic failure, Y-linked, 2

DDX3Y KDM5D

9.36e-0416842cv:C1839071
Diseasecongenital myasthenic syndrome (implicated_via_orthology)

CHRNA4 CHRNG

9.36e-0416842DOID:3635 (implicated_via_orthology)
DiseaseAntibody Deficiency Syndrome

C4A EPG5

1.06e-0317842C0003257
DiseaseDisease Exacerbation

NBAS IDH3B COPS7A TMEM63A

1.28e-03165844C0235874
Diseasesystemising measurement

NBAS ERLEC1

1.62e-0321842EFO_0010221
Diseasethalamus volume

DCDC1 CD14 MACF1

1.86e-0385843EFO_0006935
Diseasesmoking behavior, BMI-adjusted waist-hip ratio

EHMT2 IQCN WARS2

1.92e-0386843EFO_0004318, EFO_0007788
Diseasespermatogenic failure (is_implicated_in)

IQCN MSH5

1.95e-0323842DOID:0111910 (is_implicated_in)
DiseaseMyasthenic Syndromes, Congenital

GMPPB CHRNG

2.12e-0324842C0751882
Diseasealcohol use disorder (implicated_via_orthology)

SHMT2 KDM5D CHRNA4 CHRNG

2.36e-03195844DOID:1574 (implicated_via_orthology)

Protein segments in the cluster

PeptideGeneStartEntry
AIHKSIAIGSQPVLT

ERLEC1

306

Q96DZ1
PQLAGTKTLHVADAQ

DIAPH2-AS1

11

Q14236
AAKPPSLNIVEAAVH

EPG5

1631

Q9HCE0
QAPGLAKARSLSVQH

CHRNA4

456

P43681
KAHLNLVPGTEAIAG

ERVK-18

491

O42043
SKAHLNLVPGTEAIA

ERVK-19

601

O71037
SKAHLNLVPGTEAIA

ERVK-8

601

Q902F8
KAHLNLVPGTEAIAG

ERVK-9

601

Q9UKH3
SAKGAALATLIHQVL

COPS7A

21

Q9UBW8
SSVAILIHFLPAKAG

CHRNG

256

P07510
RAIQHLLKSGAVPDA

ANKK1

541

Q8NFD2
AFGILAAHVPTLQVL

ATP5F1D

66

P30049
AVAHAGAKINRIPAN

DLGAP2

176

Q9P1A6
RTPLHAAAQKGSVEI

EHMT2

686

Q96KQ7
HAGNLTVAVVLPLAN

NPR1

31

P16066
GVLKAVDHINSTIAP

ENO2

61

P09104
IKAIGGIILTASHNP

PGM1

106

P36871
HLATGAVKVQSQAPL

IQCN

721

Q9H0B3
PQAASKTHGLLQAVR

FAM90A7

241

A6NKC0
GPHNHAIAAVAVALK

SHMT2

326

P34897
ENGIVLDPLKATHAV

CERT1

436

Q9Y5P4
LHIDPKTGVAVARAV

NUP210

1516

Q8TEM1
KVDPNIVLHASVSIG

DCDC1

661

M0R2J8
KHLAQPDTAVISVVG

MAGI3

996

Q5TCQ9
KLVGFISAIPANIHI

NMT1

221

P30419
SHLVKIPGIIIAASA

MCM5

146

P33992
KAPNAVVLVVGTHLD

LRRK1

746

Q38SD2
LVNHFNAGVPLAAKS

NAIF1

31

Q69YI7
LHGIAQPVTAVALAT

GABPA

431

Q06546
LVPGSRHISQAAAKV

ABAT

21

P80404
KPILLHQVEALAAAG

GMPPB

31

Q9Y5P6
VKQALAPSAHRGSLV

KDM5D

921

Q9BY66
PEKGVVHLATAAVLN

ENOSF1

106

Q7L5Y1
PVLAVSLALEGKASH

PDCD4

201

Q53EL6
LKLGQPVSAVAALQA

PLXNB3

391

Q9ULL4
AISPVLNRKLAVGSH

PDZD8

536

Q8NEN9
KAAGVRIVIPAHQAE

PEX7

186

O00628
TVLHGKVPLAATAGL

MACF1

1386

O94854
GSVILALVNGAKHVP

KIF26A

661

Q9ULI4
PLAAHISLVNKAAVD

TUBGCP6

1491

Q96RT7
KGIHFAAVNQALAAP

TMEM63A

661

O94886
VASKGLDFPAIQHVI

DDX41

491

Q9UJV9
PLKVLEGVVAAVHAS

NBAS

2061

A2RRP1
SKAHLNLVPGTEAIA

ERVK-7

1361

P63135
ASLNIPAVAAAHVIK

ARHGAP33

181

O14559
GLKVLSIAQAHSPAF

CD14

171

P08571
ALAAIVQGSLPKLHR

DNAH6

1361

Q9C0G6
DKIPGSAVLIFNVHV

FKBP10

356

Q96AY3
LDLFANVVHVKSLPG

IDH3B

136

O43837
GQSPSVLKGILHEAA

DOCK9

441

Q9BZ29
KAHLNLVPGTEAIAG

ERVK-24

491

P61566
SKAHLNLVPGTEAIA

ERVK-25

601

P61570
SKAHLNLVPGTEAIA

ERVK-6

601

Q69384
KAHLNLVPGTEAIAG

ERVK-7

491

P61567
SEKLAAGALPHINAR

CCDC3

246

Q9BQI4
SHLKVGSAADIPINI

FLNA

1961

P21333
KAHLNLVPGTEAIAG

ERVK-21

601

P61565
SKAHLNLVPGTEAIA

HERVK_113

601

Q902F9
PQAASKTHGLLQAVR

FAM90A20P

241

A6NIJ5
PVAGAVHLATAILKN

AMT

236

P48728
ALHQFRSGKSPILVA

DDX3Y

481

O15523
AGLSKVVHNTALDPV

BICRA

1316

Q9NZM4
LLQVFAHIAGAISPT

SLC17A4

431

Q9Y2C5
HPITAKAIAASVGII

ATP4A

631

P20648
PLLGHDAVIQALAQK

CAMSAP2

96

Q08AD1
TLTKAPVDLLGVAHN

C4A

1201

P0C0L4
SPIAALKNVAEALGH

IRF2BP1

421

Q8IU81
HTAAQAGLPDKLVAR

MSH5

756

O43196
VQVKVLADSLHVGPS

PTGFRN

136

Q9P2B2
IRALHKGSAAAPALQ

WARS2

16

Q9UGM6
GVVQLVKSAAHPGLV

CCDC51

336

Q96ER9
ISNLRGHVPASAVVK

PLAC8L1

36

A1L4L8
KVAAAAGPANVHLIN

SIX5

506

Q8N196
GSAAVLLAVHAAVRP

SHARPIN

16

Q9H0F6
VNKLQGHSAPVLDVS

WDR13

446

Q9H1Z4
EKLGVPFQVLVATHA

PNKP

241

Q96T60
HLAVIGALLAVGATK

PMEL

11

P40967
LAAKHGHSPAVQVLL

ANKDD1B

241

A6NHY2
SGPGAVIHSLLAEKN

UHRF1BP1L

1261

A0JNW5
HALAKIAAVSNPDIA

UNC45B

696

Q8IWX7
NLSPGKGVVSLVAVH

TFDP1

21

Q14186
AHITQALSNPGDVIK

USP42

161

Q9H9J4
PKAVHNSVAAQLTGV

ZCCHC3

386

Q9NUD5
ALQVAHKAEILSPLG

TMTC1

676

Q8IUR5
KAVATAQAPGHIGAL

TEP1

2311

Q99973
AVVHGKVALAVSLNL

MVK

21

Q03426
PQAASKTHGLLQAVR

FAM90A2P

241

Q658T7
AAVKQSLQVHLSGAP

DHX38

726

Q92620
LIAQSISPAAAHAGL

TACC2

1896

O95359
HKIFPAALQLVASGT

GART

981

P22102
APSKVNVHVLGVLLG

TTC37

731

Q6PGP7
VSATAIHNKLGLPGI

TEAD1

131

P28347
VPDLIAFNLKAHVVA

WDCP

341

Q9H6R7
PHQGSLRKAVAAALA

TMEM169

16

Q96HH4
VAAAVSSGGLALKHP

TASP1

246

Q9H6P5
EGHQDAVTAALLIPK

WDFY1

21

Q8IWB7
PKIISGILHVANTGN

PP2D1

351

A8MPX8
PQGLLSQKASLHVVA

ZNF554

196

Q86TJ5
AVKLENFPIHAITGV

MYO9B

1756

Q13459
IVAVHGGAALVLTPK

GRIN2D

141

O15399