Cluster composition

Functions

CategoryNameIntersectionWithQueryPValueGenesInTermGenesInQueryGenesInTermInQueryID
GeneOntologyMolecularFunctioncrossover junction DNA endonuclease activity

MUS81 EME2 SLX1A

2.73e-069653GO:0008821
GeneOntologyMolecularFunctionDNA endonuclease activity, producing 3'-phosphomonoesters

MUS81 EME2 SLX1A

5.33e-0611653GO:0016889
GeneOntologyMolecularFunctionendonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters

MUS81 EME2 SLX1A

3.61e-0520653GO:0016894
GeneOntologyMolecularFunctionflap endonuclease activity

MUS81 SLX1A

2.88e-048652GO:0048256
GeneOntologyMolecularFunctionDNA endonuclease activity

MUS81 EME2 SLX1A

3.96e-0444653GO:0004520
GeneOntologyMolecularFunctionnuclease activity

PXDNL HELZ2 MUS81 EME2 SLX1A

9.32e-04231655GO:0004518
GeneOntologyMolecularFunctionendonuclease activity

PXDNL MUS81 EME2 SLX1A

1.01e-03136654GO:0004519
GeneOntologyMolecularFunctionhydrolase activity, acting on ester bonds

SGPP1 PLCD3 PXDNL CTDP1 HELZ2 MRPL58 MUS81 EME2 SLX1A

1.16e-03807659GO:0016788
GeneOntologyMolecularFunctionDNA nuclease activity

MUS81 EME2 SLX1A

1.36e-0367653GO:0004536
GeneOntologyBiologicalProcessmitotic DNA damage checkpoint signaling

PPP1R10 HUS1B MUS81 FOXO4 EME2

1.00e-0591655GO:0044773
GeneOntologyBiologicalProcessmitotic DNA integrity checkpoint signaling

PPP1R10 HUS1B MUS81 FOXO4 EME2

1.24e-0595655GO:0044774
GeneOntologyBiologicalProcessmitotic intra-S DNA damage checkpoint signaling

HUS1B MUS81 EME2

1.97e-0517653GO:0031573
GeneOntologyBiologicalProcessDNA damage checkpoint signaling

PPP1R10 HUS1B MUS81 FOXO4 EME2

6.96e-05136655GO:0000077
GeneOntologyBiologicalProcessDNA integrity checkpoint signaling

PPP1R10 HUS1B MUS81 FOXO4 EME2

9.43e-05145655GO:0031570
GeneOntologyBiologicalProcessmitotic cell cycle checkpoint signaling

PPP1R10 HUS1B MUS81 FOXO4 EME2

1.63e-04163655GO:0007093
GeneOntologyCellularComponentHolliday junction resolvase complex

MUS81 EME2

8.89e-055632GO:0048476
GeneOntologyCellularComponentuniplex complex

MICU3 MCUB

1.33e-046632GO:1990246
GeneOntologyCellularComponentendodeoxyribonuclease complex

MUS81 EME2

1.33e-046632GO:1905347
DomainERCC4

MUS81 EME2

1.08e-045622SM00891
DomainERCC4_domain

MUS81 EME2

1.08e-045622IPR006166
DomainERCC4

MUS81 EME2

1.08e-045622PF02732
DomainJmjC

KDM6B HR

2.85e-0324622PF02373
DomainVWC

CCN4 PXDNL

3.88e-0328622PF00093
DomainJMJC

KDM6B HR

5.04e-0332622PS51184
DomainJmjC_dom

KDM6B HR

5.04e-0332622IPR003347
DomainJmjC

KDM6B HR

5.36e-0333622SM00558
DomainVWFC_1

CCN4 PXDNL

6.35e-0336622PS01208
DomainVWC

CCN4 PXDNL

7.06e-0338622SM00214
DomainVWFC_2

CCN4 PXDNL

7.06e-0338622PS50184
PathwayKEGG_MEDICUS_REFERENCE_DOUBLE_HOLLIDAY_JUNCTION_RESOLUTION

MUS81 SLX1A

1.62e-046472M47839
PathwayREACTOME_RESOLUTION_OF_D_LOOP_STRUCTURES

MUS81 EME2 SLX1A

2.11e-0435473MM15293
PathwayREACTOME_RESOLUTION_OF_D_LOOP_STRUCTURES

MUS81 EME2 SLX1A

2.49e-0437473M27583
PathwayREACTOME_FANCONI_ANEMIA_PATHWAY

MUS81 EME2 SLX1A

2.92e-0439473MM15318
PathwayREACTOME_FANCONI_ANEMIA_PATHWAY

MUS81 EME2 SLX1A

2.92e-0439473M14990
PathwayREACTOME_AKT_PHOSPHORYLATES_TARGETS_IN_THE_NUCLEUS

FOXO6 FOXO4

4.81e-0410472M27095
PathwayREACTOME_AKT_PHOSPHORYLATES_TARGETS_IN_THE_NUCLEUS

FOXO6 FOXO4

4.81e-0410472MM14778
PathwayREACTOME_REGULATION_OF_LOCALIZATION_OF_FOXO_TRANSCRIPTION_FACTORS

FOXO6 FOXO4

7.03e-0412472MM15657
PathwayREACTOME_REGULATION_OF_LOCALIZATION_OF_FOXO_TRANSCRIPTION_FACTORS

FOXO6 FOXO4

7.03e-0412472M27939
Pubmed

A dual-activity topoisomerase complex regulates mRNA translation and turnover.

TYK2 PLCD3 NHSL1 SCAF1 ARAP3 CANT1 TMEM8B SPEG RNPEPL1 CTDP1 HELZ2 MUS81 ARHGEF2 KDM6B COMTD1 WNK2 HR

4.90e-111105701735748872
Pubmed

Uncontrolled mitochondrial calcium uptake underlies the pathogenesis of neurodegeneration in MICU1-deficient mice and patients.

MICU3 CHAT MCUB

9.28e-071070335302860
Pubmed

Human MUS81-EME2 can cleave a variety of DNA structures including intact Holliday junction and nicked duplex.

MUS81 EME2

3.99e-06270224692662
Pubmed

MUS81-EME2 promotes replication fork restart.

MUS81 EME2

3.99e-06270224813886
Pubmed

Crystal structure of the human MUS81-EME2 complex.

MUS81 EME2

3.99e-06270235290797
Pubmed

Identification and characterization of the human mus81-eme1 endonuclease.

MUS81 EME2

1.20e-05370212721304
Pubmed

Candidate gene study of FOXO1, FOXO4, and FOXO6 reveals no association with human longevity in Germans.

FOXO6 FOXO4

1.20e-05370221388494
Pubmed

Signaling from Mus81-Eme2-Dependent DNA Damage Elicited by Chk1 Deficiency Modulates Replication Fork Speed and Origin Usage.

MUS81 EME2

1.20e-05370226804904
Pubmed

FOXO4 mediates resistance to oxidative stress in lens epithelial cells by modulating the TRIM25/Nrf2 signaling.

TRIM25 FOXO4

1.20e-05370236075446
Pubmed

Spatial and temporal expression of FoxO transcription factors in the developing and adult murine brain.

FOXO6 FOXO4

2.39e-05470216326148
Pubmed

Disruption of mouse Slx4, a regulator of structure-specific nucleases, phenocopies Fanconi anemia.

MUS81 SLX1A

3.98e-05570221240276
Pubmed

Regulation of multiple DNA repair pathways by the Fanconi anemia protein SLX4.

MUS81 SLX1A

3.98e-05570223093618
Pubmed

Cooperative control of holliday junction resolution and DNA repair by the SLX1 and MUS81-EME1 nucleases.

MUS81 SLX1A

3.98e-05570224076219
Pubmed

Coordinated actions of SLX1-SLX4 and MUS81-EME1 for Holliday junction resolution in human cells.

MUS81 SLX1A

3.98e-05570224076221
Pubmed

FoxO transcription factors; Regulation by AKT and 14-3-3 proteins.

FOXO6 FOXO4

5.96e-05670221708191
Pubmed

SLX4-SLX1 Protein-independent Down-regulation of MUS81-EME1 Protein by HIV-1 Viral Protein R (Vpr).

MUS81 SLX1A

5.96e-05670227354282
Pubmed

SLX4 assembles a telomere maintenance toolkit by bridging multiple endonucleases with telomeres.

MUS81 SLX1A

5.96e-05670224012755
Pubmed

FoxO transcription factors suppress Myc-driven lymphomagenesis via direct activation of Arf.

FOXO6 FOXO4

5.96e-05670217974917
Pubmed

RTEL1 dismantles T loops and counteracts telomeric G4-DNA to maintain telomere integrity.

MUS81 SLX1A

5.96e-05670222579284
Pubmed

Coordination of structure-specific nucleases by human SLX4/BTBD12 is required for DNA repair.

MUS81 SLX1A

8.33e-05770219595721
Pubmed

Human SLX4 is a Holliday junction resolvase subunit that binds multiple DNA repair/recombination endonucleases.

MUS81 SLX1A

1.11e-04870219596236
Pubmed

A mitochondrial protein compendium elucidates complex I disease biology.

DNAJC4 MICU3 NDUFAF3 MRPL58 CHAT COMTD1 ECHS1 MRPL24 MTFMT

2.46e-04104770918614015
Pubmed

GFR alpha3, a component of the artemin receptor, is required for migration and survival of the superior cervical ganglion.

CHAT ARTN

2.60e-041270210482239
Pubmed

Global analysis of host-pathogen interactions that regulate early-stage HIV-1 replication.

SCAF1 CANT1 NDUFAF3 CTDP1 MUS81

2.71e-0428370518854154
Pubmed

Identification of FAAP24, a Fanconi anemia core complex protein that interacts with FANCM.

MUS81 EME2

4.12e-041570217289582
Pubmed

SLX4 interacts with RTEL1 to prevent transcription-mediated DNA replication perturbations.

MUS81 SLX1A

4.12e-041570232398829
Pubmed

Identification of forkhead transcription factors in cortical and dopaminergic areas of the adult murine brain.

FOXO6 FOXO4

4.71e-041670216376864
Pubmed

Genetic variants in nuclear-encoded mitochondrial genes influence AIDS progression.

DNAJC4 NDUFAF3 MRPL58 CHAT COMTD1 ECHS1 MRPL24 MTFMT

5.38e-0492670820877624
Pubmed

The RNA-mediated estrogen receptor α interactome of hormone-dependent human breast cancer cell nuclei.

PLCD3 PPP1R10 SCAF1 TRIM25 MBD1 HELZ2 WHAMM ARHGEF2 COMTD1 N4BP3

7.99e-041497701031527615
Pubmed

LncRNA SLC26A4-AS1 suppresses the MRN complex-mediated DNA repair signaling and thyroid cancer metastasis by destabilizing DDX5.

TRIM25 MRC2

8.18e-042170232939012
Pubmed

FOXO Transcription Factors Are Required for Normal Somatotrope Function and Growth.

FOXO6 FOXO4

1.07e-032470234971379
Pubmed

Interactome and Proteome Dynamics Uncover Immune Modulatory Associations of the Pathogen Sensing Factor cGAS.

TRIM25 MBD1 HELZ2 MRPL24

1.18e-0322870430471916
Pubmed

HDLBP Promotes Hepatocellular Carcinoma Proliferation and Sorafenib Resistance by Suppressing Trim71-dependent RAF1 Degradation.

PPP1R10 SCAF1 TRIM25 STARD9 HELZ2 MRPL58 ARHGEF2 ECHS1 MTFMT

1.68e-03137170936244648
Pubmed

Identifications of novel host cell factors that interact with the receptor-binding domain of the SARS-CoV-2 spike protein.

TYK2 PLCD3 ARAP3 DNAJC10 ARHGEF2 HR

1.98e-0365070638777146
Pubmed

Quantitative high-confidence human mitochondrial proteome and its dynamics in cellular context.

MICU3 NDUFAF3 MRPL58 COMTD1 ECHS1 MCUB MRPL24 MTFMT

1.99e-03113670834800366
InteractionTOP3B interactions

TYK2 PLCD3 NHSL1 SCAF1 TRIM25 ARAP3 CANT1 TMEM8B SPEG RNPEPL1 CTDP1 HELZ2 MUS81 ARHGEF2 KDM6B COMTD1 WNK2 HR

5.63e-0714706518int:TOP3B
GeneFamilyForkhead boxes

FOXO6 FOXO4

3.13e-0343352508
GeneFamilyDNAJ (HSP40) heat shock proteins|C2 tensin-type domain containing

DNAJC4 DNAJC10

4.04e-0349352584
Diseaseblood tin measurement

CHAT ARTN

1.30e-0325632EFO_0021530

Protein segments in the cluster

PeptideGeneStartEntry
EVRCPGPAPLRLLEW

CTDP1

21

Q9Y5B0
PPRRGRDAPPRLWCV

ARAP3

696

Q8WWN8
PGTVRRWNYPPPLCI

CSMD2

1951

Q7Z408
TEPLPAEAPWARRPV

ARHGEF2

866

Q92974
RDCARRLPPARAWLP

APCDD1L

156

Q8NCL9
LCLRVRPPRLWCPHP

CCN4

156

O95388
RPPRLWCPHPRRVSI

CCN4

161

O95388
PAWKRLSPCPPTRSP

CBLL2

391

Q8N7E2
LGWCSRRPLRPLPSV

PTGDR

46

Q13258
TRLLPTPGTWRPARP

MCUB

11

Q9NWR8
ARWCSGRARRPPPQP

ARTN

71

Q5T4W7
PPPAWLKGPACRAAR

KDM6B

481

O15054
SSRQPWRPPACRSPL

JPH4

466

Q96JJ6
LWLLCSHRPAPGRPP

CANT1

56

Q8WVQ1
VRGPLRPPVRCPAWR

ECHS1

11

P30084
RPPVRCPAWRPFASG

ECHS1

16

P30084
ILERAPFWVPTCLPP

HR

151

O43593
PICLRPPRPGLRRQW

MBD1

241

Q9UIS9
DWCLSPPRPALSPIL

NHSL1

991

Q5SYE7
SRPRSCTWPLPRPEI

FOXO4

26

P98177
RPRSCTWPLPQPDLA

FOXO6

21

A8MYZ6
PAPAPWPRHLLRCVL

MRC2

6

Q9UBG0
RLLWPPPRVSPPLCA

MICU3

6

Q86XE3
APSSAWPPRLRPRTC

PANO1

76

I0J062
SGRPRPDTLTPPWVR

MON1A

61

Q86VX9
PLPPPRLVATVWARA

PXDNL

776

A1KZ92
AEDPPWPARLLRAPL

CYP2U1

11

Q7Z449
WVGPCFPELRRRVPR

FAM189B

431

P81408
PVLCTLRPRGWQPAP

CYP46A1

481

Q9Y6A2
PTRLPDRSVAWPCPD

FNIP2

691

Q9P278
PPWRGRREQCLLPPE

COMTD1

36

Q86VU5
GRTPWRCRERPVPAK

IGFLR1

106

Q9H665
VWLLPPPARCPRRAL

MRPL58

16

Q14197
PLRLCRLWPRNPPSR

DNAJC4

6

Q9NNZ3
HPSCLPRWRGPAPVI

MTFMT

146

Q96DP5
VLPRRVWRDCLPPSL

HUS1B

136

Q8NHY5
TWTKVDIPSPPPRRC

KLHDC4

106

Q8TBB5
RWTRASPDPCPRSLP

EME2

116

A4GXA9
FAPWCPPCRALLPEL

DNAJC10

476

Q8IXB1
RPDPVRPIDPAAWLS

DVL1P1

351

P54792
CALPRPWSVPPLRRG

HELZ2

501

Q9BYK8
ERLPISPGPLLRWVP

C1orf162

71

Q8NEQ5
PRAPRLPRRLAWCSI

MOS

41

P00540
IGPRSRVWAEPCLLP

RNPEPL1

271

Q9HAU8
RDSALKTPWRPAPCP

TSPEAR-AS2

41

P59090
LVPCPPLRRVAVWPV

SPATA5L1

101

Q9BVQ7
CTKDIIRWPRPASPP

SGPP1

176

Q9BX95
ALWPPLERCFPRLPP

WHAMM

96

Q8TF30
TRVLLEPLRPWACPR

RUSC1-AS1

166

Q66K80
EPLRPWACPRLPRSP

RUSC1-AS1

171

Q66K80
CREVRVPSPPPREAW

STARD9

1766

Q9P2P6
PPWIRRRPVVVEPIS

MRPL24

36

Q96A35
PWRSAAPEEPERLPL

SHANK1

1476

Q9Y566
ELPAPRRLRWKCSPE

CHAT

476

P28329
RRRRSCSPAPTWPPL

C10orf95

61

Q9H7T3
SLRCPPVELPWAPRR

NDUFAF3

16

Q9BU61
RPIPELLRAPPERVW

SPEG

1891

Q15772
WRRCRRPPEEPPVAA

PLCD3

6

Q8N3E9
PLPVPSLLPRLRAWR

SCAF1

141

Q9H7N4
LAREPPADVWTPPAR

TRIM25

81

Q14258
DVAPRLSPVRVWPRP

TRPV6

16

Q9H1D0
PPEHCWPVRPTLRNE

TMEM8B

31

A6NDV4
PEAPWPPAPRARACR

TNFSF9

11

P41273
PPAPRARACRVLPWA

TNFSF9

16

P41273
ACRLFWPRSRPPPAC

TLCD3B

256

Q71RH2
PPWARLPLTLRWVRP

SLX1A

121

Q9BQ83
RWVRPDLRQDLCLPP

SLX1A

131

Q9BQ83
PCRGLTLPCLPWRRA

WNK2

1346

Q9Y3S1
WVCPRPLVLPSPLVT

PPP1R10

461

Q96QC0
RTCWPALPRDRTPAP

WWC2-AS2

131

Q96NR7
WPERVPRLLAPRLPS

TBPL2

6

Q6SJ96
VVERLRAAPVPPLCW

TMEM198

201

Q66K66
ERVERIPWLAPECLP

TYK2

771

P29597
EPEELVRCRSPWRPG

FAM53A

126

Q6NSI3
GRDRTCIPPRLPPEW

MOSMO

51

Q8NHV5
CIPPRLPPEWVTTLF

MOSMO

56

Q8NHV5
RPLPACPNPLFVRWL

MUS81

11

Q96NY9
RALREPPTPWSPRLE

N4BP3

526

O15049