Cluster composition

Functions

Category	Name	IntersectionWithQuery	PValue	GenesInTerm	GenesInQuery	GenesInTermInQuery	ID
GeneOntologyMolecularFunction	helicase activity	DHX16 SETX ATRX CHD2 CHD3 RUVBL1 DDX18 HELLS	9.23e-06	158	130	8	GO:0004386
GeneOntologyMolecularFunction	histone binding	KDM5B NCAPD3 ATRX CHD2 NCL CHD3 USP16 UHRF1 HDGFL2 SPTY2D1	9.42e-06	265	130	10	GO:0042393
GeneOntologyMolecularFunction	ATP-dependent activity, acting on DNA	SETX ATRX CHD2 CHD3 RFC1 RUVBL1 HELLS	1.97e-05	127	130	7	GO:0008094
GeneOntologyMolecularFunction	ATP-dependent chromatin remodeler activity	ATRX CHD2 CHD3 HELLS	9.59e-05	37	130	4	GO:0140658
GeneOntologyMolecularFunction	H3K9me3 modified histone binding	UHRF1 HDGFL2	2.50e-04	4	130	2	GO:0062072
GeneOntologyMolecularFunction	catalytic activity, acting on DNA	SETX ATRX CHD2 CHD3 RFC1 RUVBL1 DNMT1 HELLS	3.23e-04	262	130	8	GO:0140097
GeneOntologyMolecularFunction	histone H3K4me/H3K4me2/H3K4me3 demethylase activity	KDM5B KDM5C	6.20e-04	6	130	2	GO:0034647
GeneOntologyMolecularFunction	ATP hydrolysis activity	DHX16 MYH4 ATRX SRPRA CHD2 CHD3 RFC1 RUVBL1 DDX18 AFG3L2	6.29e-04	441	130	10	GO:0016887
GeneOntologyMolecularFunction	ATP-dependent activity	DHX16 MYH4 SETX ATRX SRPRA CHD2 CHD3 RFC1 RUVBL1 DDX18 AFG3L2 HELLS	6.82e-04	614	130	12	GO:0140657
GeneOntologyMolecularFunction	histone H3 demethylase activity	KDM5B KDM5C KDM2B	7.84e-04	28	130	3	GO:0141052
GeneOntologyMolecularFunction	2-oxoglutarate-dependent dioxygenase activity	KDM5B KDM5C KDM2B OGFOD1	8.54e-04	65	130	4	GO:0016706
GeneOntologyMolecularFunction	microtubule binding	HAUS6 MAP1A MAP4 CETN2 GTSE1 CKAP5 SVBP CFAP157	9.35e-04	308	130	8	GO:0008017
GeneOntologyMolecularFunction	histone demethylase activity	KDM5B KDM5C KDM2B	1.06e-03	31	130	3	GO:0032452
GeneOntologyMolecularFunction	histone H3K4 demethylase activity	KDM5B KDM5C	1.15e-03	8	130	2	GO:0032453
GeneOntologyMolecularFunction	protein demethylase activity	KDM5B KDM5C KDM2B	1.16e-03	32	130	3	GO:0140457
GeneOntologyMolecularFunction	rRNA binding	NCL RPL23 RPF2 KDM2B	1.77e-03	79	130	4	GO:0019843
GeneOntologyBiologicalProcess	negative regulation of DNA-templated transcription	FNIP2 KDM5B PCBP3 ARID4A KDM5C MAGEB18 SHOX2 CHD3 RFC1 LYAR RPL23 ORC2 SMTNL1 PRDM11 SARS1 ZNF608 PA2G4 AEBP2 CCAR1 KDM2B UHRF1 ZFHX3 SMO SPEN ST18 TADA3 DNMT1	1.23e-07	1399	129	27	GO:0045892
GeneOntologyBiologicalProcess	negative regulation of RNA biosynthetic process	FNIP2 KDM5B PCBP3 ARID4A KDM5C MAGEB18 SHOX2 CHD3 RFC1 LYAR RPL23 ORC2 SMTNL1 PRDM11 SARS1 ZNF608 PA2G4 AEBP2 CCAR1 KDM2B UHRF1 ZFHX3 SMO SPEN ST18 TADA3 DNMT1	1.51e-07	1413	129	27	GO:1902679
GeneOntologyBiologicalProcess	negative regulation of transcription by RNA polymerase II	FNIP2 PCBP3 ARID4A KDM5C MAGEB18 SHOX2 CHD3 RFC1 LYAR RPL23 ORC2 SARS1 ZNF608 AEBP2 KDM2B UHRF1 ZFHX3 SMO SPEN ST18 TADA3 DNMT1	5.91e-07	1053	129	22	GO:0000122
GeneOntologyBiologicalProcess	chromatin organization	KDM5B ATRX ARID4A KDM5C CHD2 CHD3 HUWE1 USP16 HP1BP3 SAFB RUVBL1 AEBP2 KDM2B UHRF1 UTP3 TADA3 HDGFL2 SPTY2D1 DNMT1 HELLS	7.42e-07	896	129	20	GO:0006325
GeneOntologyBiologicalProcess	protein-DNA complex organization	KDM5B ATRX ARID4A KDM5C CHD2 CHD3 HUWE1 USP16 HP1BP3 RPL23 SAFB RUVBL1 AEBP2 KDM2B UHRF1 UTP3 TADA3 HDGFL2 SPTY2D1 DNMT1 HELLS	1.00e-06	999	129	21	GO:0071824
GeneOntologyBiologicalProcess	mRNA processing	DHX16 SETX NCL THOC2 ADARB2 EFTUD2 MFAP1 SAFB SLTM CTNNBL1 SAFB2 RBM6 IK SF3B2	9.34e-06	551	129	14	GO:0006397
GeneOntologyBiologicalProcess	chromatin remodeling	KDM5B ATRX ARID4A KDM5C CHD2 CHD3 HUWE1 USP16 HP1BP3 RUVBL1 KDM2B UHRF1 HDGFL2 SPTY2D1 DNMT1 HELLS	1.59e-05	741	129	16	GO:0006338
GeneOntologyBiologicalProcess	ribonucleoprotein complex biogenesis	SETX CKAP5 NCL LYAR USP16 EIF3CL RUVBL1 PA2G4 DDX18 RPF2 EIF3C UTP3 SF3B2	2.12e-05	515	129	13	GO:0022613
GeneOntologyBiologicalProcess	chromosomal DNA methylation maintenance following DNA replication	DNMT1 HELLS	3.88e-05	2	129	2	GO:0141119
GeneOntologyBiologicalProcess	RNA splicing	DHX16 SETX NCL THOC2 EFTUD2 MFAP1 AHNAK CTNNBL1 RBM6 IK TADA3 SF3B2	7.53e-05	502	129	12	GO:0008380
GeneOntologyBiologicalProcess	transcription by RNA polymerase I	NCL LYAR POLR1G BNC1 SPTY2D1	1.38e-04	79	129	5	GO:0006360
GeneOntologyBiologicalProcess	RNA processing	DHX16 SETX NCL LYAR THOC2 ADARB2 EFTUD2 MFAP1 SAFB SARS1 PA2G4 AHNAK DDX18 RPF2 SLTM CTNNBL1 SAFB2 RBM6 UTP3 IK TADA3 SF3B2	1.49e-04	1500	129	22	GO:0006396
GeneOntologyBiologicalProcess	mRNA metabolic process	DHX16 PCBP3 SETX NCL THOC2 ADARB2 EFTUD2 MFAP1 SAFB SLTM CTNNBL1 SAFB2 RBM6 PNRC1 IK SF3B2	1.97e-04	917	129	16	GO:0016071
GeneOntologyCellularComponent	9+0 non-motile cilium	MAP1A OPN3 CETN2 LYAR TULP1 WDR19 SMO RPGR	4.94e-06	153	129	8	GO:0097731
GeneOntologyCellularComponent	U2-type precatalytic spliceosome	DHX16 EFTUD2 MFAP1 IK SF3B2	1.55e-05	51	129	5	GO:0071005
GeneOntologyCellularComponent	precatalytic spliceosome	DHX16 EFTUD2 MFAP1 IK SF3B2	2.05e-05	54	129	5	GO:0071011
GeneOntologyCellularComponent	photoreceptor cell cilium	MAP1A OPN3 CETN2 LYAR TULP1 WDR19 RPGR	2.51e-05	139	129	7	GO:0097733
GeneOntologyCellularComponent	non-motile cilium	MAP1A OPN3 CETN2 LYAR TULP1 WDR19 SMO RPGR	3.00e-05	196	129	8	GO:0097730
GeneOntologyCellularComponent	heterochromatin	NCAPD3 ATRX ORC2 UHRF1 DNMT1 HELLS	3.86e-05	101	129	6	GO:0000792
GeneOntologyCellularComponent	pericentric heterochromatin	NCAPD3 ATRX DNMT1 HELLS	4.35e-05	32	129	4	GO:0005721
GeneOntologyCellularComponent	photoreceptor outer segment	MAP1A OPN3 LYAR TULP1 WDR19 RPGR	6.55e-05	111	129	6	GO:0001750
GeneOntologyCellularComponent	U2-type spliceosomal complex	DHX16 EFTUD2 MFAP1 IK SF3B2	3.39e-04	97	129	5	GO:0005684
GeneOntologyCellularComponent	spliceosomal complex	DHX16 NCL EFTUD2 MFAP1 CTNNBL1 IK SF3B2	3.82e-04	215	129	7	GO:0005681
GeneOntologyCellularComponent	microtubule organizing center	FNIP2 HAUS6 MAP4 CETN2 CKAP5 CHD3 PPP4R3A ORC2 MFAP1 SMTNL1 RUVBL1 CTNNBL1 SMO RPGR CFAP157	5.51e-04	919	129	15	GO:0005815
GeneOntologyCellularComponent	nuclear protein-containing complex	DHX16 ARID4A CETN2 NCL CHD3 POLR1G THOC2 EFTUD2 ORC2 CCNT1 MFAP1 RUVBL1 AEBP2 CTNNBL1 KDM2B IK TADA3 SF3B2 NUP153	7.90e-04	1377	129	19	GO:0140513
GeneOntologyCellularComponent	nuclear chromosome	NCAPD3 SETX ATRX ARID4A ORC2 RUVBL1 IK	1.02e-03	254	129	7	GO:0000228
GeneOntologyCellularComponent	eukaryotic translation initiation factor 3 complex, eIF3m	EIF3CL EIF3C	1.32e-03	9	129	2	GO:0071541
GeneOntologyCellularComponent	myofibril	CACNA1S MYH4 SYNM SMTNL1 AKAP4 AHNAK LMOD1	1.55e-03	273	129	7	GO:0030016
Domain	-	SAFB SLTM SAFB2 CCAR1 SF3B2	2.60e-07	21	128	5	1.10.720.30
Domain	SAP	SAFB SLTM SAFB2 CCAR1 SF3B2	3.35e-07	22	128	5	PF02037
Domain	SAP	SAFB SLTM SAFB2 CCAR1 SF3B2	4.26e-07	23	128	5	SM00513
Domain	SAP	SAFB SLTM SAFB2 CCAR1 SF3B2	6.65e-07	25	128	5	PS50800
Domain	SAP_dom	SAFB SLTM SAFB2 CCAR1 SF3B2	6.65e-07	25	128	5	IPR003034
Domain	EIF3C_N_dom	EIF3CL EIF3C	4.66e-05	2	128	2	IPR008905
Domain	eIF-3c_N	EIF3CL EIF3C	4.66e-05	2	128	2	PF05470
Domain	EIF3C	EIF3CL EIF3C	4.66e-05	2	128	2	IPR027516
Domain	ZF_PHD_2	KDM5B ATRX KDM5C CHD3 KDM2B UHRF1	4.86e-05	95	128	6	PS50016
Domain	ZF_PHD_1	KDM5B ATRX KDM5C CHD3 KDM2B UHRF1	5.16e-05	96	128	6	PS01359
Domain	SNF2_N	ATRX CHD2 CHD3 HELLS	6.52e-05	32	128	4	IPR000330
Domain	SNF2_N	ATRX CHD2 CHD3 HELLS	6.52e-05	32	128	4	PF00176
Domain	Helicase_C	DHX16 ATRX CHD2 CHD3 DDX18 HELLS	9.46e-05	107	128	6	PF00271
Domain	HELICc	DHX16 ATRX CHD2 CHD3 DDX18 HELLS	9.46e-05	107	128	6	SM00490
Domain	Helicase_C	DHX16 ATRX CHD2 CHD3 DDX18 HELLS	9.96e-05	108	128	6	IPR001650
Domain	HELICASE_CTER	DHX16 ATRX CHD2 CHD3 DDX18 HELLS	1.05e-04	109	128	6	PS51194
Domain	HELICASE_ATP_BIND_1	DHX16 ATRX CHD2 CHD3 DDX18 HELLS	1.05e-04	109	128	6	PS51192
Domain	DEXDc	DHX16 ATRX CHD2 CHD3 DDX18 HELLS	1.05e-04	109	128	6	SM00487
Domain	Helicase_ATP-bd	DHX16 ATRX CHD2 CHD3 DDX18 HELLS	1.10e-04	110	128	6	IPR014001
Domain	-	KDM5B ARID4A KDM5C	1.35e-04	15	128	3	1.10.150.60
Domain	BRIGHT	KDM5B ARID4A KDM5C	1.35e-04	15	128	3	SM00501
Domain	ARID_dom	KDM5B ARID4A KDM5C	1.35e-04	15	128	3	IPR001606
Domain	ARID	KDM5B ARID4A KDM5C	1.35e-04	15	128	3	PS51011
Domain	ARID	KDM5B ARID4A KDM5C	1.35e-04	15	128	3	PF01388
Domain	Znf_PHD-finger	KDM5B KDM5C CHD3 KDM2B UHRF1	2.10e-04	79	128	5	IPR019787
Domain	Lys_sp_deMease-like_dom	KDM5B KDM5C	2.77e-04	4	128	2	IPR013637
Domain	PLU-1	KDM5B KDM5C	2.77e-04	4	128	2	PF08429
Domain	PHD	KDM5B KDM5C CHD3 KDM2B UHRF1	3.66e-04	89	128	5	SM00249
Domain	Znf_PHD	KDM5B KDM5C CHD3 KDM2B UHRF1	4.06e-04	91	128	5	IPR001965
Domain	zf-C5HC2	KDM5B KDM5C	4.60e-04	5	128	2	PF02928
Domain	Znf_C5HC2	KDM5B KDM5C	4.60e-04	5	128	2	IPR004198
Domain	Znf_FYVE_PHD	KDM5B ATRX KDM5C CHD3 KDM2B UHRF1	5.29e-04	147	128	6	IPR011011
Domain	ARM-like	NCAPD3 SETX CKAP5 HUWE1 PPP4R4 PPP4R3A PACRGL CTNNBL1	5.52e-04	270	128	8	IPR011989
Domain	JmjC	KDM5B KDM5C KDM2B	5.73e-04	24	128	3	PF02373
Domain	JMJC	KDM5B KDM5C KDM2B	1.35e-03	32	128	3	PS51184
Domain	Chromodomain-like	ARID4A CHD2 CHD3	1.35e-03	32	128	3	IPR016197
Domain	JmjC_dom	KDM5B KDM5C KDM2B	1.35e-03	32	128	3	IPR003347
Domain	JmjC	KDM5B KDM5C KDM2B	1.48e-03	33	128	3	SM00558
Domain	Chromo/shadow_dom	ARID4A CHD2 CHD3	1.48e-03	33	128	3	IPR000953
Domain	CHROMO	ARID4A CHD2 CHD3	1.48e-03	33	128	3	SM00298
Domain	DNA/RNA_helicase_DEAH_CS	DHX16 CHD2 CHD3	1.75e-03	35	128	3	IPR002464
Domain	PHD	KDM5B KDM5C CHD3 UHRF1	1.76e-03	75	128	4	PF00628
Domain	-	DHX16 SETX ATRX SRPRA CHD2 CHD3 RFC1 EFTUD2 RUVBL1 DDX18 AFG3L2 MPP7 HELLS	1.84e-03	746	128	13	3.40.50.300
Domain	JmjN	KDM5B KDM5C	2.02e-03	10	128	2	SM00545
Domain	JmjN	KDM5B KDM5C	2.02e-03	10	128	2	PF02375
Domain	JMJN	KDM5B KDM5C	2.02e-03	10	128	2	PS51183
Domain	JmjN	KDM5B KDM5C	2.02e-03	10	128	2	IPR003349
Domain	P-loop_NTPase	DHX16 MYH4 SETX ATRX SRPRA CHD2 CHD3 RFC1 EFTUD2 RUVBL1 DDX18 AFG3L2 MPP7 HELLS	2.03e-03	848	128	14	IPR027417
Domain	DEAH_ATP_HELICASE	DHX16 CHD2 CHD3	2.23e-03	38	128	3	PS00690
Domain	ZF_CXXC	KDM2B DNMT1	2.46e-03	11	128	2	PS51058
Domain	Znf_CXXC	KDM2B DNMT1	2.46e-03	11	128	2	IPR002857
Domain	zf-CXXC	KDM2B DNMT1	2.46e-03	11	128	2	PF02008
Domain	RRM	NCL SAFB SLTM SAFB2 RBM6 SPEN	3.85e-03	217	128	6	SM00360
Domain	RRM_dom	NCL SAFB SLTM SAFB2 RBM6 SPEN	4.78e-03	227	128	6	IPR000504
Domain	RRM	NCL SAFB SLTM SAFB2 RBM6 SPEN	5.10e-03	230	128	6	PS50102
Domain	PINT	EIF3CL EIF3C	5.25e-03	16	128	2	SM00088
Domain	AAA	RFC1 RUVBL1 AFG3L2	5.44e-03	52	128	3	PF00004
Domain	PCI_dom	EIF3CL EIF3C	5.93e-03	17	128	2	IPR000717
Domain	HEAT_type_2	CKAP5 PPP4R4	5.93e-03	17	128	2	IPR021133
Domain	PCI	EIF3CL EIF3C	5.93e-03	17	128	2	PF01399
Domain	ATPase_AAA_core	RFC1 RUVBL1 AFG3L2	6.05e-03	54	128	3	IPR003959
Domain	Chromodomain_CS	CHD2 CHD3	6.64e-03	18	128	2	IPR023779
Domain	-	NCL SAFB SLTM SAFB2 RBM6 SPEN	6.75e-03	244	128	6	3.30.70.330
Pubmed	The Nse5/6-like SIMC1-SLF2 complex localizes SMC5/6 to viral replication centers.	PCBP3 SETX ATRX MAP4 ARID4A GTSE1 NCL CHD3 RFC1 LYAR THOC2 HP1BP3 EFTUD2 RPL23 ORC2 CCNT1 MFAP1 SAFB RUVBL1 SLC4A1AP PA2G4 AHNAK DDX18 SLTM SAFB2 RBM6 CCAR1 UTP3 IK SPEN TADA3 HDGFL2 SF3B2 NUP153 DNMT1 HELLS	5.78e-26	954	131	36	36373674
Pubmed	H4K20me0 recognition by BRCA1-BARD1 directs homologous recombination to sister chromatids.	NCAPD3 SETX ATRX ARID4A CETN2 CKAP5 SRPRA CHD2 NCL CHD3 RFC1 LYAR POLR1G THOC2 HP1BP3 EFTUD2 RPL23 ORC2 MFAP1 PRDM11 SAFB RUVBL1 AHNAK DDX18 AFG3L2 SLTM SAFB2 CCAR1 KDM2B UHRF1 IK SPEN TADA3 HDGFL2 SPTY2D1 SF3B2 NUP153 DNMT1 HELLS	1.27e-24	1294	131	39	30804502
Pubmed	Large-scale characterization of HeLa cell nuclear phosphoproteins.	DHX16 NCAPD3 ATRX MAP4 ARID4A KDM5C GTSE1 CKAP5 NCL CHD3 HUWE1 RFC1 POLR1G THOC2 USP16 PPP4R3A EIF3CL EFTUD2 MFAP1 SAFB SLC4A1AP SAFB2 RBM6 CCAR1 KDM2B EIF3C SPEN SF3B2 NUP153 DNMT1	6.20e-22	774	131	30	15302935
Pubmed	Mapping the Ku Interactome Using Proximity-Dependent Biotin Identification in Human Cells.	DHX16 ATRX MAP4 NCL CHD3 RFC1 THOC2 PPP4R3A ORC2 CCNT1 MFAP1 RUVBL1 SAFB2 ZFHX3 UTP3 IK SPEN HDGFL2 SF3B2 NUP153 DNMT1	2.92e-21	283	131	21	30585729
Pubmed	Synthetic Lethal and Resistance Interactions with BET Bromodomain Inhibitors in Triple-Negative Breast Cancer.	DHX16 ATRX MAP4 CETN2 KDM5C CHD2 NCL CHD3 RFC1 LYAR POLR1G THOC2 PPP4R3A HP1BP3 CCNT1 MFAP1 SAFB PA2G4 AHNAK DDX18 SLTM CTNNBL1 SAFB2 CCAR1 UHRF1 IK TADA3 HDGFL2 SF3B2 NUP153 DNMT1 HELLS	1.01e-20	1014	131	32	32416067
Pubmed	N-Terminal Acetyltransferase Naa40p Whereabouts Put into N-Terminal Proteoform Perspective.	HAUS6 ATRX MAP1A MAP4 CKAP5 NCL CHD3 RFC1 THOC2 USP16 PPP4R3A HP1BP3 EFTUD2 GPALPP1 RPL23 ORC2 CCNT1 SAFB FAM193A RUVBL1 PA2G4 AHNAK AFG3L2 SAFB2 EIF3C HDGFL2 SF3B2 NUP153 DNMT1 HELLS	1.21e-19	934	131	30	33916271
Pubmed	Gain of Additional BIRC3 Protein Functions through 3'-UTR-Mediated Protein Complex Formation.	DHX16 NCAPD3 ATRX MAP4 CKAP5 NCL IDH2 HUWE1 RFC1 LYAR THOC2 EIF3CL ARPC2 EFTUD2 RPL23 SAFB SARS1 RUVBL1 PA2G4 DDX18 RPF2 NEMF SLTM CTNNBL1 SAFB2 CCAR1 UHRF1 EIF3C UTP3 IK SPEN SF3B2 NUP153 DNMT1 HELLS	3.36e-19	1425	131	35	30948266
Pubmed	BAP1 regulation of the key adaptor protein NCoR1 is critical for γ-globin gene repression.	DHX16 MAP4 SRPRA CHD2 NCL IDH2 HUWE1 RFC1 LYAR POLR1G THOC2 USP16 HP1BP3 EIF3CL EFTUD2 GPALPP1 RPL23 ORC2 CCNT1 MFAP1 SAFB RUVBL1 PA2G4 AHNAK DDX18 AFG3L2 RPF2 CTNNBL1 SAFB2 CCAR1 SF3B2 NUP153 DNMT1	2.42e-18	1318	131	33	30463901
Pubmed	Targeting USP10 induces degradation of oncogenic ANLN in esophageal squamous cell carcinoma.	DHX16 MAP4 SYNM CKAP5 SRPRA NCL RFC1 LYAR THOC2 USP16 HP1BP3 EIF3CL ARPC2 EFTUD2 RPL23 MFAP1 SAFB RUVBL1 PA2G4 AHNAK DDX18 AFG3L2 RPF2 SLTM SAFB2 C3 UTP3 IK SPEN SF3B2 NUP153 DNMT1	5.40e-18	1257	131	32	36526897
Pubmed	MYC multimers shield stalled replication forks from RNA polymerase.	CETN2 SRPRA NCL HUWE1 RFC1 LYAR POLR1G THOC2 EFTUD2 RPL23 SAFB RUVBL1 SLC4A1AP AHNAK DDX18 RPF2 SLTM CTNNBL1 SAFB2 RBM6 CCAR1 UHRF1 EIF3C UTP3 IK SPTY2D1 SF3B2 NUP153 DNMT1	6.13e-18	989	131	29	36424410
Pubmed	Identifying biological pathways that underlie primordial short stature using network analysis.	DHX16 MAP4 GTSE1 CKAP5 NCL CHD3 HUWE1 THOC2 HP1BP3 ARPC2 EFTUD2 RPL23 MFAP1 SAFB RUVBL1 PA2G4 AHNAK DDX18 AFG3L2 RPF2 SLTM SAFB2 UHRF1 EIF3C IK SPEN SF3B2 NUP153 HELLS	1.54e-17	1024	131	29	24711643
Pubmed	Dynamic Protein Interactions of the Polycomb Repressive Complex 2 during Differentiation of Pluripotent Cells.	KDM5B SETX ATRX CHD2 CHD3 HUWE1 RFC1 LYAR USP16 ORC2 AHNAK AFG3L2 AEBP2 SLTM CTNNBL1 CCAR1 UHRF1 SPEN HDGFL2 DNMT1 HELLS	9.11e-17	469	131	21	27634302
Pubmed	Proteomic profiling of VCP substrates links VCP to K6-linked ubiquitylation and c-Myc function.	DHX16 SETX MAP4 CKAP5 CHD2 NCL HUWE1 RFC1 LYAR POLR1G USP16 EFTUD2 RPL23 CCNT1 MFAP1 SAFB RUVBL1 PA2G4 AHNAK DDX18 AFG3L2 RPF2 SLTM CTNNBL1 SAFB2 CCAR1 ACAA2 IK SF3B2 CCDC93 DNMT1	3.61e-16	1353	131	31	29467282
Pubmed	Combinatorial targeting of a chromatin complex comprising Dot1L, menin and the tyrosine kinase BAZ1B reveals a new therapeutic vulnerability of endocrine therapy-resistant breast cancer.	NCAPD3 CETN2 NCL CHD3 RFC1 LYAR POLR1G THOC2 HP1BP3 EFTUD2 RPL23 CCNT1 MFAP1 SAFB RUVBL1 DDX18 RPF2 SLTM SAFB2 CCAR1 EIF3C UTP3 IK SF3B2 NUP153	1.36e-15	847	131	25	35850772
Pubmed	MECP2 directly interacts with RNA polymerase II to modulate transcription in human neurons.	DHX16 KDM5B SETX MAP1A CHD2 NCL IDH2 LYAR THOC2 HP1BP3 EFTUD2 RPL23 MFAP1 SAFB RUVBL1 DDX18 RPF2 NEMF SLTM CTNNBL1 SAFB2 RBM6 CCAR1 EIF3C IK SPEN SF3B2	5.11e-15	1082	131	27	38697112
Pubmed	Identification of SUMO Binding Proteins Enriched after Covalent Photo-Cross-Linking.	NCAPD3 ATRX MAP4 KDM5C CKAP5 NCL CHD3 HUWE1 EFTUD2 SAFB SARS1 RUVBL1 AHNAK CTNNBL1 SAFB2 SF3B2 DNMT1	1.06e-14	332	131	17	32786267
Pubmed	Characterizing ZC3H18, a Multi-domain Protein at the Interface of RNA Production and Destruction Decisions.	MAP4 NCL LYAR POLR1G THOC2 ADARB2 HP1BP3 EFTUD2 RPL23 MFAP1 SAFB RUVBL1 PA2G4 DDX18 RPF2 SLTM CTNNBL1 SAFB2 EIF3C IK SPEN SF3B2	5.58e-14	731	131	22	29298432
Pubmed	The E3 ubiquitin ligase HECTD1 contributes to cell proliferation through an effect on mitosis.	NCAPD3 MAP4 CKAP5 NCL CHD3 RFC1 LYAR POLR1G THOC2 HP1BP3 RPL23 RUVBL1 PA2G4 DDX18 NEMF SAFB2 RBM6 UHRF1 UTP3 IK SPTY2D1 DNMT1	1.19e-13	759	131	22	35915203
Pubmed	The RNA-mediated estrogen receptor α interactome of hormone-dependent human breast cancer cell nuclei.	NCAPD3 SETX ATRX MAP4 CETN2 CKAP5 ARHGEF12 SRPRA CHD2 LYAR POLR1G CCNT1 SLC4A1AP PA2G4 AFG3L2 RPF2 CTNNBL1 RBM6 CCAR1 KDM2B ZFHX3 EIF3C UTP3 IK SPEN TADA3 HDGFL2 SPTY2D1 MPP7	2.65e-13	1497	131	29	31527615
Pubmed	Functional proteomics establishes the interaction of SIRT7 with chromatin remodeling complexes and expands its role in regulation of RNA polymerase I transcription.	DHX16 MAP4 CKAP5 CHD2 NCL HUWE1 RFC1 THOC2 HP1BP3 AHNAK DDX18 RPF2 SLTM RBM6 CCAR1 IK SPEN SF3B2 NUP153 DNMT1	6.30e-13	653	131	20	22586326
Pubmed	A probability-based approach for high-throughput protein phosphorylation analysis and site localization.	HAUS6 SETX MAP4 KDM5C GTSE1 NCL HUWE1 RFC1 POLR1G THOC2 EIF3CL SAFB PA2G4 RBM6 UHRF1 EIF3C SPEN NUP153	7.47e-13	503	131	18	16964243
Pubmed	SETD1A Methyltransferase Is Physically and Functionally Linked to the DNA Damage Repair Protein RAD18.	NCL HP1BP3 MFAP1 SAFB SLC4A1AP AHNAK CTNNBL1 SAFB2 CCAR1 UHRF1 IK SPEN HDGFL2 SPTY2D1	8.36e-13	251	131	14	31076518
Pubmed	Targeted and Interactome Proteomics Revealed the Role of PHD2 in Regulating BRD4 Proline Hydroxylation.	DHX16 ATRX MAP4 CKAP5 NCL RFC1 HP1BP3 EFTUD2 CCNT1 MFAP1 SAFB SAFB2 EIF3C IK HDGFL2 NUP153 DNMT1	1.04e-12	441	131	17	31239290
Pubmed	TBK1 phosphorylation activates LIR-dependent degradation of the inflammation repressor TNIP1.	PCBP3 MAP4 GTSE1 NCL LYAR POLR1G THOC2 HP1BP3 EIF3CL ARPC2 EFTUD2 RPL23 SAFB AHNAK DDX18 SLTM SAFB2 UHRF1 C3 EIF3C UTP3 IK SF3B2	1.24e-12	949	131	23	36574265
Pubmed	CHD3 and CHD4 form distinct NuRD complexes with different yet overlapping functionality.	NCL CHD3 RFC1 LYAR HP1BP3 EFTUD2 RPL23 MFAP1 SAFB RUVBL1 DDX18 CCAR1 ZFHX3 EIF3C IK SPEN HDGFL2 SF3B2 HELLS	1.62e-12	605	131	19	28977666
Pubmed	Proteomic characterization of chromosomal common fragile site (CFS)-associated proteins uncovers ATRX as a regulator of CFS stability.	ATRX NCL LYAR THOC2 HP1BP3 ARPC2 EFTUD2 RPL23 SAFB RUVBL1 AHNAK DDX18 RPF2 SLTM SAFB2 CCAR1 UHRF1 C3 SF3B2	5.92e-12	652	131	19	31180492
Pubmed	Complementary proteomics strategies capture an ataxin-1 interactome in Neuro-2a cells.	PCBP3 MAP4 CKAP5 NCL IDH2 HUWE1 HP1BP3 EIF3CL ARPC2 EFTUD2 RPL23 CCNT1 SARS1 DDX18 CCAR1 EIF3C SPEN HDGFL2 DNMT1	8.32e-12	665	131	19	30457570
Pubmed	In silico APC/C substrate discovery reveals cell cycle-dependent degradation of UHRF1 and other chromatin regulators.	NCAPD3 MAP4 CKAP5 ARHGEF12 SRPRA NCL HUWE1 RFC1 LYAR EIF3CL EFTUD2 RPL23 RUVBL1 PA2G4 ALDH1L2 CTNNBL1 UHRF1 UTP3 SF3B2 NUP153 DNMT1 HELLS	1.50e-11	971	131	22	33306668
Pubmed	The in vivo Interaction Landscape of Histones H3.1 and H3.3.	DHX16 SETX ATRX ARID4A CHD2 CHD3 RFC1 LYAR HP1BP3 ORC2 CCNT1 SLC4A1AP KDM2B UHRF1 SPEN HDGFL2 DNMT1 HELLS	1.72e-11	608	131	18	36089195
Pubmed	A Degradation Motif in STAU1 Defines a Novel Family of Proteins Involved in Inflammation.	HAUS6 PCBP3 MAP1A MAP4 CETN2 CKAP5 SRPRA USP16 ARPC2 FAM193A SARS1 RUVBL1 AHNAK DDX18 CCAR1 IK SPEN TADA3 HELLS	3.56e-11	724	131	19	36232890
Pubmed	HDLBP Promotes Hepatocellular Carcinoma Proliferation and Sorafenib Resistance by Suppressing Trim71-dependent RAF1 Degradation.	DHX16 SETX MAP4 CETN2 DAB1 SRPRA CHD2 NCL CHD3 RFC1 LYAR THOC2 HP1BP3 MFAP1 RUVBL1 PA2G4 AHNAK DDX18 NEMF CTNNBL1 CCAR1 UHRF1 SPTY2D1 SF3B2 DNMT1	5.44e-11	1371	131	25	36244648
Pubmed	Acetylation of ELF5 suppresses breast cancer progression by promoting its degradation and targeting CCND1.	DHX16 MAP4 SYNM CHD3 LYAR MFAP1 SAFB PA2G4 DDX18 RPF2 NEMF SLTM SAFB2 EIF3C IK SF3B2 DNMT1 HELLS	5.51e-11	653	131	18	33742100
Pubmed	ZZW-115-dependent inhibition of NUPR1 nuclear translocation sensitizes cancer cells to genotoxic agents.	PCBP3 LYAR THOC2 HP1BP3 ARPC2 EFTUD2 MFAP1 SAFB RUVBL1 PA2G4 AHNAK DDX18 CTNNBL1 SAFB2 UHRF1 EIF3C IK HDGFL2	6.55e-11	660	131	18	32780723
Pubmed	KSHV episome tethering sites on host chromosomes and regulation of latency-lytic switch by CHD4.	NCL THOC2 GPALPP1 MFAP1 SAFB AHNAK SAFB2 IK SF3B2 HELLS	7.37e-11	130	131	10	35545047
Pubmed	Assembly of the U5 snRNP component PRPF8 is controlled by the HSP90/R2TP chaperones.	MAP4 CKAP5 SRPRA NCL HUWE1 RFC1 LYAR HP1BP3 EFTUD2 RPL23 SARS1 RUVBL1 SLC4A1AP PA2G4 AHNAK DDX18 AFG3L2 NEMF CTNNBL1 EIF3C IK HDGFL2 SF3B2 DNMT1 HELLS	1.06e-10	1415	131	25	28515276
Pubmed	Delineating the HMGB1 and HMGB2 interactome in prostate and ovary epithelial cells and its relationship with cancer.	ATRX NCL HP1BP3 EFTUD2 SAFB AHNAK SLTM CTNNBL1 SAFB2 CCAR1 C3	1.55e-10	188	131	11	29721183
Pubmed	Interactome analyses revealed that the U1 snRNP machinery overlaps extensively with the RNAP II machinery and contains multiple ALS/SMA-causative proteins.	THOC2 HP1BP3 EFTUD2 CCNT1 MFAP1 SAFB RUVBL1 SLTM SAFB2 CCAR1 IK SF3B2	1.65e-10	244	131	12	29884807
Pubmed	WWP2 ubiquitylates RNA polymerase II for DNA-PK-dependent transcription arrest and repair at DNA breaks.	SETX MAP4 NCL RFC1 LYAR HP1BP3 EFTUD2 RPL23 CCNT1 SAFB RUVBL1 PA2G4 DDX18 RPF2 NEMF EIF3C SF3B2	1.88e-10	615	131	17	31048545
Pubmed	Wnt regulation: exploring Axin-Disheveled interactions and defining mechanisms by which the SCF E3 ubiquitin ligase is recruited to the destruction complex.	NCAPD3 MAP4 CKAP5 NCL RFC1 LYAR THOC2 HP1BP3 EFTUD2 RPL23 CCNT1 RUVBL1 PA2G4 AHNAK DDX18 CCAR1 EIF3C SF3B2 NUP153	2.31e-10	809	131	19	32129710
Pubmed	The PHLPP1 N-Terminal Extension Is a Mitotic Cdk1 Substrate and Controls an Interactome Switch.	HAUS6 MAP4 SYNM GTSE1 CKAP5 CHD3 MFAP1 RUVBL1 PA2G4 AHNAK SF3B2 MPP7	2.86e-10	256	131	12	33397691
Pubmed	Comprehensive interactome profiling of the human Hsp70 network highlights functional differentiation of J domains.	FAM184B ATRX TRPM7 SYNM SRPRA NCL DNAJC6 USP16 HP1BP3 EFTUD2 WDR19 MFAP1 FAM193A SARS1 SLC4A1AP PA2G4 DDX18 AFG3L2 RPF2 TADA3 HDGFL2 SF3B2 MPP7 DNMT1 HELLS	2.96e-10	1487	131	25	33957083
Pubmed	The Epigenetic Factor Landscape of Developing Neocortex Is Regulated by Transcription Factors Pax6→ Tbr2→ Tbr1.	KDM5B ATRX KDM5C CHD2 CHD3 RUVBL1 AEBP2 KDM2B UHRF1 DNMT1	4.75e-10	157	131	10	30186101
Pubmed	Poly(ADP-ribosyl)ation of BRD7 by PARP1 confers resistance to DNA-damaging chemotherapeutic agents.	DHX16 NCAPD3 MAP4 CKAP5 SRPRA NCL HUWE1 RFC1 THOC2 EFTUD2 DDX18 AFG3L2 RPF2 NEMF DNMT1	5.30e-10	486	131	15	30940648
Pubmed	Unbiased Identification of trans Regulators of ADAR and A-to-I RNA Editing.	NCL CHD3 RFC1 THOC2 ADARB2 EIF3CL EFTUD2 CCNT1 AHNAK EIF3C SF3B2 NUP153	5.48e-10	271	131	12	32433965
Pubmed	MYC Protein Interactome Profiling Reveals Functionally Distinct Regions that Cooperate to Drive Tumorigenesis.	GTSE1 NCL EFTUD2 CCNT1 MFAP1 DDX18 KDM2B IK SPEN TADA3 SF3B2 DNMT1 HELLS	5.90e-10	339	131	13	30415952
Pubmed	Nucleolar proteome dynamics.	NCAPD3 ATRX CHD3 RFC1 ADARB2 ARPC2 EFTUD2 RUVBL1 PA2G4 RPF2 CTNNBL1 UTP3 SF3B2 DNMT1	7.45e-10	419	131	14	15635413
Pubmed	GRWD1 regulates ribosomal protein L23 levels via the ubiquitin-proteasome system.	CKAP5 HUWE1 RFC1 HP1BP3 RPL23 RUVBL1 ALDH1L2 DDX18 AFG3L2 EIF3C SF3B2	8.65e-10	221	131	11	29991511
Pubmed	PRISMA and BioID disclose a motifs-based interactome of the intrinsically disordered transcription factor C/EBPα.	NCAPD3 SETX MAP4 CKAP5 CHD3 RFC1 THOC2 PPP4R3A CCDC7 GPALPP1 CCNT1 SAFB PA2G4 SAFB2 CCAR1 IK SPEN TADA3 NUP153 DNMT1 HELLS	1.06e-09	1103	131	21	34189442
Pubmed	Identification of proximal SUMO-dependent interactors using SUMO-ID.	SETX MAP1A MAP4 GTSE1 SRPRA CCNT1 SAFB ZNF608 SLC4A1AP AHNAK SLTM EIF3C IK HELLS	1.57e-09	444	131	14	34795231
Pubmed	The mRNA-bound proteome and its global occupancy profile on protein-coding transcripts.	DHX16 MAP4 CHD2 NCL LYAR EFTUD2 MFAP1 SAFB DDX18 RPF2 SLTM SAFB2 RBM6 CCAR1 EIF3C UTP3 SPEN SF3B2	1.61e-09	807	131	18	22681889
Pubmed	RNA-binding proteins with basic-acidic dipeptide (BAD) domains self-assemble and aggregate in Alzheimer's disease.	NCL RFC1 LYAR THOC2 HP1BP3 EFTUD2 RPL23 CCNT1 SAFB RUVBL1 DDX18 RPF2 SLTM SAFB2 CCAR1 IK SF3B2	1.76e-09	713	131	17	29802200
Pubmed	Interactome Rewiring Following Pharmacological Targeting of BET Bromodomains.	ATRX CHD2 CHD3 RFC1 THOC2 HP1BP3 EIF3CL RPL23 CCNT1 RUVBL1 DDX18 RPF2 UHRF1 DNMT1 HELLS	1.86e-09	533	131	15	30554943
Pubmed	Matrix-screening reveals a vast potential for direct protein-protein interactions among RNA binding proteins.	DHX16 PCBP3 GTSE1 NCL LYAR EIF3CL RPL23 SARS1 RUVBL1 PA2G4 DDX18 CTNNBL1 RBM6 ACAA2 EIF3C UTP3 SF3B2	2.17e-09	723	131	17	34133714
Pubmed	Proximity biotinylation and affinity purification are complementary approaches for the interactome mapping of chromatin-associated protein complexes.	HAUS6 ARID4A CKAP5 HUWE1 RFC1 THOC2 GPALPP1 ZNF608 AHNAK AFG3L2 SLTM CCAR1 UHRF1 C3 SPEN HELLS	3.14e-09	645	131	16	25281560
Pubmed	Human Antiviral Protein IFIX Suppresses Viral Gene Expression during Herpes Simplex Virus 1 (HSV-1) Infection and Is Counteracted by Virus-induced Proteasomal Degradation.	DHX16 ATRX CKAP5 HUWE1 LYAR HP1BP3 SAFB SAFB2 SPEN HDGFL2 SF3B2	3.29e-09	251	131	11	28077445
Pubmed	Identifications of novel host cell factors that interact with the receptor-binding domain of the SARS-CoV-2 spike protein.	DHX16 NCAPD3 SETX ATRX SRPRA NCL CHD3 HP1BP3 AFG3L2 NEMF SLTM CCAR1 OGFOD1 SF3B2 DNMT1 HELLS	3.50e-09	650	131	16	38777146
Pubmed	Methyltransferase-like 21e inhibits 26S proteasome activity to facilitate hypertrophy of type IIb myofibers.	SETX NCL EIF3CL ARPC2 RPL23 AHNAK CCAR1 ACAA2 EIF3C SF3B2 DNMT1	4.56e-09	259	131	11	31162944
Pubmed	HIV-1 Vpr induces cell cycle arrest and enhances viral gene expression by depleting CCDC137.	ATRX NCL ORC2 CCNT1 MFAP1 SAFB SLTM UTP3 HDGFL2	5.45e-09	148	131	9	32538781
Pubmed	The cell proliferation antigen Ki-67 organises heterochromatin.	SRPRA CHD3 LYAR CCNT1 RPF2 CCDC87 CTNNBL1 UHRF1 EIF3C UTP3 IK SPEN SPTY2D1	5.81e-09	410	131	13	26949251
Pubmed	The EGFR-ZNF263 signaling axis silences SIX3 in glioblastoma epigenetically.	RFC1 PA2G4 SLTM SAFB2 CCAR1 UHRF1 DNMT1	5.92e-09	66	131	7	32051553
Pubmed	Defining the proximal interaction networks of Arf GTPases reveals a mechanism for the regulation of PLD1 and PI4KB.	HAUS6 SETX TRPM7 SYNM SRPRA NCL HUWE1 HP1BP3 EFTUD2 AHNAK DDX18 ZFHX3 RPGR SPEN SPTY2D1 DNMT1 HELLS	6.32e-09	777	131	17	35844135
Pubmed	Genetic and Proteomic Interrogation of Lower Confidence Candidate Genes Reveals Signaling Networks in β-Catenin-Active Cancers.	MAP4 NCL HUWE1 RFC1 THOC2 ARPC2 EFTUD2 RPL23 CCNT1 SARS1 RUVBL1 ZNF608 PA2G4 WDR87 DDX18 AFG3L2 NEMF KDM2B IK SF3B2 HELLS	9.16e-09	1247	131	21	27684187
Pubmed	FBW7 suppresses ovarian cancer development by targeting the N6-methyladenosine binding protein YTHDF2.	DHX16 NCL RFC1 LYAR HP1BP3 RUVBL1 AHNAK AFG3L2 NEMF UHRF1 C3 HDGFL2 SF3B2 DNMT1 HELLS	9.30e-09	601	131	15	33658012
Pubmed	The functional interactome of PYHIN immune regulators reveals IFIX is a sensor of viral DNA.	ATRX HUWE1 LYAR HP1BP3 SAFB DDX18 RPF2 SLTM SAFB2 EIF3C NUP153 DNMT1	9.41e-09	349	131	12	25665578
Pubmed	ATG5 is required for B cell polarization and presentation of particulate antigens.	MAP4 CKAP5 SRPRA NCL EIF3CL SAFB RUVBL1 PA2G4 RPF2 SLTM CTNNBL1 SAFB2 CCAR1 EIF3C IK DNMT1	1.01e-08	701	131	16	30196744
Pubmed	A protein-RNA interaction atlas of the ribosome biogenesis factor AATF.	DHX16 NCL THOC2 PA2G4 DDX18 RPF2 SLTM SAFB2 CCAR1	1.20e-08	162	131	9	31363146
Pubmed	Tumor suppressor BAP1 nuclear import is governed by transportin-1.	PCBP3 MAP4 CETN2 CKAP5 NCL IDH2 HUWE1 RFC1 LYAR EIF3CL EFTUD2 RPL23 SARS1 RUVBL1 PA2G4 AHNAK NEMF HDGFL2 SF3B2 NUP153	1.25e-08	1149	131	20	35446349
Pubmed	Anticancer sulfonamides target splicing by inducing RBM39 degradation via recruitment to DCAF15.	PCBP3 NCL CHD3 HP1BP3 EFTUD2 RPL23 MFAP1 SAFB RUVBL1 PA2G4 RPF2 SAFB2 RBM6 EIF3C IK SF3B2	1.31e-08	714	131	16	28302793
Pubmed	MBD5 and MBD6 stabilize the BAP1 complex and promote BAP1-dependent cancer.	NCL HUWE1 LYAR HP1BP3 ARPC2 EFTUD2 ORC2 RUVBL1 DDX18 C3 SF3B2	1.32e-08	287	131	11	36180891
Pubmed	Optimized fragmentation schemes and data analysis strategies for proteome-wide cross-link identification.	ATRX SYNM CHD3 RFC1 ARPC2 RPL23 SARS1 RUVBL1 PA2G4 AHNAK SLTM EIF3C HDGFL2 SF3B2	1.78e-08	538	131	14	28524877
Pubmed	The Hsp70-Hsp90 co-chaperone Hop/Stip1 shifts the proteostatic balance from folding towards degradation.	CKAP5 HUWE1 THOC2 PPP4R3A EFTUD2 RPL23 SARS1 RUVBL1 DDX18 RPF2 CCAR1 EIF3C SF3B2 NUP153 HELLS	2.05e-08	638	131	15	33239621
Pubmed	In-Depth In Vivo Crosslinking in Minutes by a Compact, Membrane-Permeable, and Alkynyl-Enrichable Crosslinker.	FAM184B MYH4 ATRX CETN2 CHD2 NCL CHD3 TRDN PPP4R4 HP1BP3 ARPC2 GPALPP1 MFAP1 SAFB ZNF608 AHNAK RPF2 SAFB2 CCAR1 ALCAM SPEN HDGFL2	2.28e-08	1442	131	22	35575683
Pubmed	SMYD3 Impedes Small Cell Lung Cancer Sensitivity to Alkylation Damage through RNF113A Methylation-Phosphorylation Cross-talk.	MAP4 NCL CHD3 RFC1 LYAR PPP4R3A HP1BP3 RPL23 MFAP1 FAM193A RUVBL1 DDX18 RPF2 SF3B2 NUP153	2.89e-08	655	131	15	35819319
Pubmed	Hdac4 Interactions in Huntington's Disease Viewed Through the Prism of Multiomics.	ATRX CETN2 ARHGEF12 GRIK2 IDH2 GPALPP1 RPL23 SAFB FAM193A PA2G4 NEMF C3 DNMT1	3.29e-08	475	131	13	31040226
Pubmed	Proteome-wide identification of HSP70/HSC70 chaperone clients in human cells.	MAP4 CKAP5 NCL HUWE1 RFC1 HP1BP3 EFTUD2 RPL23 SAFB RUVBL1 PA2G4 AHNAK DDX18 SLTM CTNNBL1 CCAR1 ALCAM EIF3C HDGFL2 SF3B2 DNMT1	4.41e-08	1367	131	21	32687490
Pubmed	CHK2-BRCA1 tumor-suppressor axis restrains oncogenic Aurora-A kinase to ensure proper mitotic microtubule assembly.	CFAP47 MAP4 CKAP5 NCL HP1BP3 EFTUD2 RPL23 RUVBL1 PA2G4 AHNAK RBM6 SF3B2 NUP153	5.19e-08	494	131	13	26831064
Pubmed	Scanning the human proteome for calmodulin-binding proteins.	ATRX KDM5C HUWE1 USP16 TRDN SLTM EIF3C	6.14e-08	92	131	7	15840729
Pubmed	Jade-1S phosphorylation induced by CK1α contributes to cell cycle progression.	MAP1A CHD3 POLR1G USP16 DDX18 HDGFL2	7.08e-08	56	131	6	26919559
Pubmed	KAP1 facilitates reinstatement of heterochromatin after DNA replication.	DHX16 NCAPD3 MAP1A IDH2 HUWE1 ARPC2 RPL23 RUVBL1 PA2G4 CTNNBL1 CCAR1 ACAA2 EIF3C IK DNMT1	7.39e-08	704	131	15	29955894
Pubmed	Menin and Menin-Associated Proteins Coregulate Cancer Energy Metabolism.	NCAPD3 CHD3 HP1BP3 ORC2 CCNT1 RPF2 SAFB2 EIF3C SPEN SF3B2 NUP153	7.63e-08	341	131	11	32971831
Pubmed	SHLD2/FAM35A co-operates with REV7 to coordinate DNA double-strand break repair pathway choice.	NCAPD3 CETN2 SRPRA CHD2 RFC1 RPL23 AFG3L2 HELLS	1.10e-07	150	131	8	30154076
Pubmed	BTB-ZF factors recruit the E3 ligase cullin 3 to regulate lymphoid effector programs.	NCL HP1BP3 DDX18 NUP153 DNMT1	1.10e-07	31	131	5	23086144
Pubmed	Two-Dimensional Fractionation Method for Proteome-Wide Cross-Linking Mass Spectrometry Analysis.	CKAP5 NCL CHD3 THOC2 PPP4R3A ARPC2 EFTUD2 RPL23 RUVBL1 SLC4A1AP PA2G4 EIF3C HDGFL2 SF3B2 CCDC93 DNMT1	1.36e-07	847	131	16	35235311
Pubmed	Comprehensive Interactome Mapping of the DNA Repair Scaffold SLX4 Using Proximity Labeling and Affinity Purification.	NCAPD3 ATRX GTSE1 CCNT1 MFAP1 DDX18 RBM6 IK SPTY2D1	1.80e-07	222	131	9	37071664
Pubmed	The ubiquitin-specific protease USP36 SUMOylates EXOSC10 and promotes the nucleolar RNA exosome function in rRNA processing.	NCL RFC1 LYAR POLR1G HP1BP3 RPL23 RUVBL1 DDX18 RPF2 C3 UTP3 SPTY2D1	3.20e-07	483	131	12	36912080
Pubmed	WDR76 Co-Localizes with Heterochromatin Related Proteins and Rapidly Responds to DNA Damage.	ATRX CETN2 CHD2 CHD3 RFC1 LYAR RUVBL1 AHNAK DDX18 UHRF1 NUP153	3.23e-07	394	131	11	27248496
Pubmed	Direct interaction between hnRNP-M and CDC5L/PLRG1 proteins affects alternative splice site choice.	SETX ATRX CKAP5 CHD3 HUWE1 EFTUD2 ORC2 RUVBL1 AHNAK IK SF3B2 NUP153 HELLS	3.39e-07	582	131	13	20467437
Pubmed	The Tumor Suppressor CIC Directly Regulates MAPK Pathway Genes via Histone Deacetylation.	ARID4A HUWE1 RFC1 THOC2 EFTUD2 RPL23 ORC2 RUVBL1 CCAR1 ZFHX3 EIF3C IK SF3B2	3.46e-07	583	131	13	29844126
Pubmed	Study of FOXO1-interacting proteins using TurboID-based proximity labeling technology.	SYNM LYAR POLR1G GPR179 HP1BP3 SAFB AHNAK C3 CFAP157	3.86e-07	243	131	9	36964488
Pubmed	Therapeutic targeting of the USP2-E2F4 axis inhibits autophagic machinery essential for zinc homeostasis in cancer progression.	MAP4 HUWE1 RFC1 POLR1G HP1BP3 PA2G4 SLTM SAFB2 CCAR1 UHRF1 UTP3	4.04e-07	403	131	11	35253629
Pubmed	FBXO22 promotes leukemogenesis by targeting BACH1 in MLL-rearranged acute myeloid leukemia.	KDM5C SRPRA CHD2 HP1BP3 SARS1 SLC4A1AP AFG3L2 CCAR1 UTP3 IK HDGFL2 HELLS	4.34e-07	497	131	12	36774506
Pubmed	A role for LSH in facilitating DNA methylation by DNMT1 through enhancing UHRF1 chromatin association.	UHRF1 DNMT1 HELLS	5.19e-07	5	131	3	33170271
Pubmed	Targeting TRIM37-driven centrosome dysfunction in 17q23-amplified breast cancer.	HAUS6 MAP1A MAP4 SYNM GTSE1 FAM193A ANKRD12 SPEN	5.24e-07	184	131	8	32908313
Pubmed	Nuclear actin interactome analysis links actin to KAT14 histone acetyl transferase and mRNA splicing.	DHX16 RPL23 ORC2 CCNT1 MFAP1 RUVBL1 SLC4A1AP PA2G4 IK HDGFL2 SF3B2 NUP153	5.24e-07	506	131	12	30890647
Pubmed	Interactions of the Antiviral Factor Interferon Gamma-Inducible Protein 16 (IFI16) Mediate Immune Signaling and Herpes Simplex Virus-1 Immunosuppression.	DHX16 CKAP5 HUWE1 LYAR HP1BP3 DDX18 RPF2 NEMF UTP3 NUP153	5.71e-07	332	131	10	25693804
Pubmed	Tagging genes with cassette-exchange sites.	KDM5B GTSE1 ARHGEF12 NCL EIF3CL SAFB SLTM SAFB2 EIF3C RPGR	6.19e-07	335	131	10	15741177
Pubmed	Construction of long-transcript enriched cDNA libraries from submicrogram amounts of total RNAs by a universal PCR amplification method.	FAM184B SETX ATRX MAP4 CHD2 CHD3 HUWE1 THOC2 PA2G4 ALDH1L2 AEBP2 SLTM SAFB2 ANKRD12 IK SPTY2D1 NUP153	7.27e-07	1084	131	17	11544199
Pubmed	In vitro nuclear interactome of the HIV-1 Tat protein.	NCL RFC1 HP1BP3 CCNT1 RUVBL1 DDX18 SPEN NUP153	8.12e-07	195	131	8	19454010
Pubmed	Dynamic protein-protein interaction wiring of the human spliceosome.	DHX16 DNAJC6 EFTUD2 MFAP1 CTNNBL1 CCAR1 IK SF3B2	8.77e-07	197	131	8	22365833
Pubmed	Systematic proteomics of endogenous human cohesin reveals an interaction with diverse splicing factors and RNA-binding proteins required for mitotic progression.	SETX CKAP5 NCL EFTUD2 RUVBL1 ZNF608 RBM6 SF3B2 HELLS	9.87e-07	272	131	9	31010829
Interaction	SMC5 interactions	MYH4 PCBP3 SETX ATRX MAP4 ARID4A GTSE1 NCL CHD3 RFC1 LYAR THOC2 HP1BP3 EFTUD2 RPL23 ORC2 CCNT1 MFAP1 SAFB RUVBL1 SLC4A1AP PA2G4 AHNAK DDX18 SLTM SAFB2 RBM6 CCAR1 UTP3 IK SPEN TADA3 HDGFL2 SF3B2 NUP153 DNMT1 HELLS	1.38e-18	1000	130	37	int:SMC5
Interaction	NAA40 interactions	DHX16 HAUS6 ATRX MAP1A MAP4 CETN2 CKAP5 NCL CHD3 RFC1 THOC2 USP16 PPP4R3A HP1BP3 EFTUD2 GPALPP1 RPL23 ORC2 CCNT1 SAFB FAM193A RUVBL1 PA2G4 AHNAK AFG3L2 SAFB2 EIF3C HDGFL2 SF3B2 NUP153 DNMT1 HELLS	1.48e-14	978	130	32	int:NAA40
Interaction	DOT1L interactions	NCAPD3 ATRX CETN2 CKAP5 NCL CHD3 RFC1 LYAR POLR1G THOC2 HP1BP3 EFTUD2 RPL23 CCNT1 SAFB RUVBL1 DDX18 RPF2 SLTM SAFB2 CCAR1 EIF3C UTP3 IK SF3B2 NUP153	9.32e-12	807	130	26	int:DOT1L
Interaction	OBSL1 interactions	DHX16 NCL HUWE1 RFC1 POLR1G THOC2 PPP4R3A HP1BP3 ARPC2 EFTUD2 MFAP1 PRDM11 SAFB RUVBL1 PA2G4 AHNAK DDX18 RPF2 NEMF SLTM SAFB2 UHRF1 UTP3 IK SPEN SF3B2 NUP153	1.88e-11	902	130	27	int:OBSL1
Interaction	XRCC6 interactions	DHX16 ATRX MAP4 NCL CHD3 HUWE1 RFC1 POLR1G THOC2 PPP4R3A EFTUD2 ORC2 CCNT1 MFAP1 RUVBL1 PA2G4 SAFB2 ZFHX3 UTP3 IK SPEN TADA3 HDGFL2 SF3B2 NUP153 DNMT1 HELLS	3.58e-11	928	130	27	int:XRCC6
Interaction	NR2C2 interactions	DHX16 MAP4 SRPRA CHD2 NCL IDH2 HUWE1 RFC1 LYAR POLR1G THOC2 USP16 HP1BP3 EIF3CL EFTUD2 GPALPP1 RPL23 ORC2 CCNT1 MFAP1 SAFB RUVBL1 PA2G4 AHNAK DDX18 AFG3L2 RPF2 CTNNBL1 SAFB2 CCAR1 SF3B2 NUP153 DNMT1	4.66e-11	1403	130	33	int:NR2C2
Interaction	MECP2 interactions	DHX16 KDM5B SETX ATRX MAP1A CHD2 NCL IDH2 LYAR POLR1G THOC2 HP1BP3 EFTUD2 RPL23 CCNT1 MFAP1 SAFB RUVBL1 DDX18 RPF2 NEMF SLTM CTNNBL1 SAFB2 RBM6 CCAR1 EIF3C IK SPEN SF3B2 DNMT1	1.15e-10	1287	130	31	int:MECP2
Interaction	DDX23 interactions	DHX16 CHD2 NCL CHD3 LYAR THOC2 PPP4R3A EFTUD2 GPALPP1 MFAP1 SAFB DDX18 SLTM SAFB2 RBM6 UTP3 IK HDGFL2 HELLS	2.68e-10	480	130	19	int:DDX23
Interaction	ZC3H18 interactions	MAP4 NCL CHD3 LYAR POLR1G THOC2 ADARB2 HP1BP3 EFTUD2 RPL23 MFAP1 SAFB RUVBL1 PA2G4 DDX18 RPF2 SLTM CTNNBL1 SAFB2 RBM6 ZNF816 EIF3C IK SPEN SF3B2	3.28e-10	877	130	25	int:ZC3H18
Interaction	MEN1 interactions	NCAPD3 ATRX CETN2 CHD3 RFC1 LYAR POLR1G THOC2 HP1BP3 EFTUD2 RPL23 ORC2 CCNT1 MFAP1 SAFB RUVBL1 ZNF608 DDX18 RPF2 SLTM SAFB2 EIF3C UTP3 IK SPEN SF3B2 NUP153	3.60e-10	1029	130	27	int:MEN1
Interaction	CIT interactions	DHX16 HAUS6 SETX CKAP5 SRPRA CHD2 NCL CHD3 LYAR POLR1G THOC2 HP1BP3 EIF3CL EFTUD2 RPL23 ORC2 MFAP1 SAFB RUVBL1 PA2G4 AHNAK DDX18 RPF2 CTNNBL1 SAFB2 UHRF1 ACAA2 UTP3 IK HDGFL2 SF3B2 NUP153	4.94e-10	1450	130	32	int:CIT
Interaction	NUP43 interactions	PCBP3 SETX MAP4 ARID4A CETN2 KDM5C CHD3 CCDC168 RFC1 HP1BP3 GPALPP1 MFAP1 SAFB RUVBL1 ZNF608 DDX18 ZFHX3 UTP3 SPEN TADA3 NUP153	5.60e-10	625	130	21	int:NUP43
Interaction	H2BC8 interactions	DHX16 ATRX ARID4A CETN2 CHD3 RFC1 LYAR HP1BP3 GPALPP1 ORC2 SLC4A1AP KDM2B UHRF1 UTP3 IK SPEN TADA3 HDGFL2 DNMT1 HELLS	8.56e-10	576	130	20	int:H2BC8
Interaction	SUMO2 interactions	NCAPD3 SETX ATRX MAP4 KDM5C CKAP5 NCL CHD3 HUWE1 HP1BP3 EFTUD2 SAFB SARS1 RUVBL1 AHNAK CTNNBL1 SAFB2 SF3B2 NUP153 DNMT1	1.33e-09	591	130	20	int:SUMO2
Interaction	HDAC1 interactions	KDM5B MYH4 HAUS6 ATRX TRPM7 ARID4A KDM5C CKAP5 SRPRA CHD3 IDH2 RFC1 POLR1G DNAJC6 PPP4R3A EFTUD2 RUVBL1 ZNF608 AHNAK KDM2B UHRF1 ZFHX3 EIF3C SPEN SF3B2 DNMT1 HELLS	1.81e-09	1108	130	27	int:HDAC1
Interaction	SIRT7 interactions	DHX16 MAP4 CKAP5 CHD2 NCL HUWE1 RFC1 LYAR THOC2 HP1BP3 AHNAK DDX18 RPF2 SLTM CTNNBL1 RBM6 CCAR1 IK SPEN SF3B2 NUP153 DNMT1	2.24e-09	744	130	22	int:SIRT7
Interaction	TERF2IP interactions	DHX16 SETX ARPP21 KDM5C CHD3 RFC1 THOC2 HP1BP3 CCNT1 MFAP1 ZNF608 SLC4A1AP CCAR1 KDM2B IK SPEN SF3B2 DNMT1 HELLS	2.72e-09	552	130	19	int:TERF2IP
Interaction	PRC1 interactions	KDM5B HAUS6 PCBP3 ATRX NCL LYAR HP1BP3 EFTUD2 RPL23 ORC2 SAFB RUVBL1 PA2G4 AHNAK DDX18 RPF2 SLTM SAFB2 UHRF1 UTP3 IK SPEN SF3B2 NUP153 CCDC93	2.77e-09	973	130	25	int:PRC1
Interaction	ZNF330 interactions	DHX16 NCL CHD3 RFC1 LYAR HP1BP3 ORC2 MFAP1 SLC4A1AP DDX18 KDM2B UHRF1 UTP3 IK SPTY2D1 DNMT1 HELLS	4.45e-09	446	130	17	int:ZNF330
Interaction	SNRNP40 interactions	DHX16 SETX CHD3 RFC1 EFTUD2 GPALPP1 RUVBL1 ZNF608 SLC4A1AP DDX18 CTNNBL1 RBM6 CCAR1 ZFHX3 UTP3 IK SPEN TADA3 HDGFL2 SPTY2D1	4.79e-09	637	130	20	int:SNRNP40
Interaction	MYCN interactions	KDM5B NCAPD3 PCBP3 CHD2 NCL IDH2 HUWE1 LYAR POLR1G THOC2 HP1BP3 EFTUD2 RPL23 MFAP1 SAFB DDX18 RPF2 SLTM SAFB2 RBM6 UHRF1 C3 UTP3 IK TADA3 HDGFL2 SPTY2D1 SF3B2 DNMT1	1.03e-08	1373	130	29	int:MYCN
Interaction	H3-3A interactions	DHX16 ATRX KDM5C CKAP5 CHD2 NCL CHD3 RFC1 LYAR HP1BP3 ORC2 CCNT1 RUVBL1 SLC4A1AP KDM2B UHRF1 SPEN HDGFL2 SF3B2 DNMT1 HELLS	1.37e-08	749	130	21	int:H3-3A
Interaction	H3C1 interactions	ATRX CHD3 RFC1 POLR1G HP1BP3 EFTUD2 ORC2 SARS1 WDR87 AHNAK DDX18 CTNNBL1 KDM2B UHRF1 ZFHX3 EIF3C UTP3 IK SPEN HDGFL2 SF3B2 DNMT1 HELLS	1.48e-08	901	130	23	int:H3C1
Interaction	HECTD1 interactions	NCAPD3 MAP4 CKAP5 NCL CHD3 HUWE1 RFC1 LYAR POLR1G THOC2 HP1BP3 EFTUD2 RPL23 RUVBL1 PA2G4 DDX18 NEMF SAFB2 RBM6 UHRF1 UTP3 IK SPTY2D1 DNMT1	1.65e-08	984	130	24	int:HECTD1
Interaction	ADARB1 interactions	NCL CHD3 RFC1 LYAR THOC2 ADARB2 HP1BP3 EIF3CL EFTUD2 CCNT1 AHNAK RPF2 EIF3C UTP3 SPTY2D1 SF3B2 NUP153	1.74e-08	489	130	17	int:ADARB1
Interaction	TOP1 interactions	DHX16 CKAP5 NCL CHD3 RFC1 POLR1G HP1BP3 EFTUD2 CCNT1 MFAP1 SAFB PA2G4 SLTM CTNNBL1 SAFB2 RBM6 CCAR1 IK ST18 SPTY2D1	2.11e-08	696	130	20	int:TOP1
Interaction	BIRC3 interactions	DHX16 MAP4 CKAP5 NCL IDH2 HUWE1 RFC1 LYAR THOC2 EIF3CL ARPC2 EFTUD2 RPL23 SAFB SARS1 RUVBL1 PA2G4 DDX18 RPF2 SLTM CTNNBL1 CCAR1 UTP3 IK SPEN SF3B2 NUP153 DNMT1	2.24e-08	1334	130	28	int:BIRC3
Interaction	CHD4 interactions	NCL CHD3 RFC1 LYAR PPP4R3A HP1BP3 EFTUD2 RPL23 MFAP1 SAFB RUVBL1 AHNAK DDX18 AFG3L2 CCAR1 ZFHX3 EIF3C IK SPEN HDGFL2 SF3B2 DNMT1 HELLS	3.11e-08	938	130	23	int:CHD4
Interaction	DNAJC8 interactions	ATRX NCL HUWE1 POLR1G PPP4R3A MFAP1 SLC4A1AP PA2G4 RPF2 HDGFL2 SF3B2 HELLS	3.23e-08	230	130	12	int:DNAJC8
Interaction	HMGB1 interactions	ATRX NCL HUWE1 POLR1G HP1BP3 EFTUD2 RPL23 SAFB AHNAK DDX18 SLTM CTNNBL1 SAFB2 CCAR1 C3 DNMT1	9.96e-08	486	130	16	int:HMGB1
Interaction	TRIM37 interactions	MYH4 HAUS6 MAP1A MAP4 SYNM MAGEB18 GTSE1 CDKL3 NCL HUWE1 ARPC2 RPL23 FAM193A PA2G4 AHNAK ZNF816 ANKRD12 SPEN	1.25e-07	630	130	18	int:TRIM37
Interaction	CENPA interactions	ATRX CHD3 RFC1 LYAR THOC2 HP1BP3 RUVBL1 DDX18 KDM2B UHRF1 UTP3 HDGFL2 DNMT1 HELLS	1.55e-07	377	130	14	int:CENPA
Interaction	IFI16 interactions	DHX16 CKAP5 NCL HUWE1 RFC1 LYAR HP1BP3 EFTUD2 SAFB SLC4A1AP DDX18 RPF2 NEMF SLTM SAFB2 EIF3C UTP3 NUP153 DNMT1	1.63e-07	714	130	19	int:IFI16
Interaction	DDX21 interactions	CHD2 NCL CHD3 HUWE1 LYAR POLR1G HP1BP3 EFTUD2 CCNT1 SAFB PA2G4 DDX18 RPF2 SLTM CTNNBL1 SAFB2 IK SPTY2D1 NUP153	1.78e-07	718	130	19	int:DDX21
Interaction	GRWD1 interactions	CKAP5 NCL HUWE1 RFC1 POLR1G HP1BP3 EFTUD2 RPL23 RUVBL1 ALDH1L2 DDX18 AFG3L2 EIF3C SF3B2	2.34e-07	390	130	14	int:GRWD1
Interaction	RAD18 interactions	NCL HP1BP3 ORC2 MFAP1 SAFB RUVBL1 SLC4A1AP CTNNBL1 SAFB2 CCAR1 UHRF1 IK SPEN HDGFL2 SPTY2D1	2.68e-07	457	130	15	int:RAD18
Interaction	DDRGK1 interactions	DHX16 NCAPD3 PCBP3 IYD CKAP5 SRPRA NCL IDH2 RFC1 LYAR POLR1G THOC2 HP1BP3 EIF3CL EFTUD2 RPL23 RUVBL1 PA2G4 DDX18 AFG3L2 RPF2 NEMF IK SF3B2 DNMT1	3.59e-07	1249	130	25	int:DDRGK1
Interaction	AKR7L interactions	DHX16 MAP1A RFC1 POLR1G NEMF RBM6 HDGFL2	4.11e-07	72	130	7	int:AKR7L
Interaction	NUPR1 interactions	PCBP3 LYAR THOC2 HP1BP3 ARPC2 EFTUD2 MFAP1 SAFB RUVBL1 PA2G4 AHNAK DDX18 CTNNBL1 SAFB2 UHRF1 EIF3C IK HDGFL2	4.11e-07	683	130	18	int:NUPR1
Interaction	RNF113A interactions	MAP4 NCL CHD3 RFC1 LYAR POLR1G PPP4R3A HP1BP3 RPL23 MFAP1 FAM193A RUVBL1 DDX18 RPF2 CCAR1 IK SF3B2 NUP153	4.97e-07	692	130	18	int:RNF113A
Interaction	SNRPA interactions	PCBP3 HUWE1 LYAR EFTUD2 RPL23 MFAP1 SAFB SLTM CTNNBL1 SAFB2 RBM6 CCAR1 ACAA2 IK SF3B2	5.26e-07	482	130	15	int:SNRPA
Interaction	POLR1G interactions	DHX16 CHD2 NCL HUWE1 RFC1 LYAR POLR1G MFAP1 SLC4A1AP DDX18 KDM2B UTP3 IK TADA3 HELLS	6.30e-07	489	130	15	int:POLR1G
Interaction	NPM1 interactions	FAM184B NCL CHD3 HUWE1 RFC1 LYAR POLR1G THOC2 TRDN HP1BP3 EFTUD2 RPL23 CCNT1 PA2G4 WDR87 DDX18 RPF2 CTNNBL1 LMOD1 PNRC1 EIF3C RPGR UTP3 SPTY2D1	6.59e-07	1201	130	24	int:NPM1
Interaction	KIF23 interactions	DHX16 PCBP3 NCL CHD3 IDH2 HUWE1 RFC1 LYAR THOC2 EFTUD2 RPL23 SAFB RUVBL1 AHNAK DDX18 RPF2 SAFB2 CCAR1 UHRF1 UTP3 SPTY2D1 SF3B2	6.99e-07	1031	130	22	int:KIF23
Interaction	RCOR1 interactions	KDM5B HAUS6 ARID4A CKAP5 CHD3 HUWE1 DNAJC6 PPP4R3A FAM193A RUVBL1 AHNAK KDM2B ZFHX3 SPEN CCDC93	7.16e-07	494	130	15	int:RCOR1
Interaction	TNIP1 interactions	PCBP3 MAP4 MAGEB18 GTSE1 NCL LYAR POLR1G THOC2 HP1BP3 EIF3CL ARPC2 EFTUD2 RPL23 SAFB AHNAK DDX18 SLTM SAFB2 UHRF1 C3 EIF3C UTP3 IK SF3B2	8.34e-07	1217	130	24	int:TNIP1
Interaction	SUZ12 interactions	SETX CHD2 NCL CHD3 THOC2 USP16 HP1BP3 EFTUD2 MFAP1 DDX18 AFG3L2 AEBP2 SLTM SAFB2 UHRF1 SF3B2 DNMT1	8.69e-07	644	130	17	int:SUZ12
Interaction	SLX4 interactions	DHX16 NCAPD3 ATRX GTSE1 NCL EFTUD2 CCNT1 MFAP1 SAFB DDX18 RBM6 IK SPTY2D1 SF3B2 NUP153 HELLS	8.81e-07	572	130	16	int:SLX4
Interaction	CBX3 interactions	DHX16 ATRX KDM5C CHD3 RFC1 HP1BP3 EFTUD2 ORC2 MFAP1 SLC4A1AP KDM2B UHRF1 SPEN TADA3 HDGFL2 DNMT1 HELLS	9.06e-07	646	130	17	int:CBX3
Interaction	H2BC4 interactions	MAP4 CKAP5 NCL HUWE1 USP16 HP1BP3 AKAP4 RUVBL1 AFG3L2 SLTM EIF3C	9.65e-07	259	130	11	int:H2BC4
Interaction	CEBPA interactions	NCAPD3 SETX MAP4 CKAP5 CHD3 RFC1 THOC2 PPP4R3A HP1BP3 CCDC7 GPALPP1 CCNT1 SAFB PA2G4 DDX18 SAFB2 CCAR1 IK SPEN TADA3 HDGFL2 NUP153 DNMT1 HELLS	1.25e-06	1245	130	24	int:CEBPA
Interaction	CEBPB interactions	MAP4 CETN2 NCL RFC1 LYAR POLR1G HP1BP3 EFTUD2 RPL23 CCNT1 RUVBL1 PA2G4 AHNAK DDX18 SAFB2 CCAR1 UHRF1 ACAA2 EIF3C IK ST18 HDGFL2 SF3B2 NUP153 DNMT1 HELLS	1.48e-06	1443	130	26	int:CEBPB
Interaction	EFTUD2 interactions	MAP4 CKAP5 SRPRA NCL CHD3 HUWE1 RFC1 LYAR HP1BP3 EFTUD2 RPL23 SARS1 RUVBL1 PA2G4 AHNAK DDX18 AFG3L2 NEMF CTNNBL1 RBM6 EIF3C IK HDGFL2 SF3B2 DNMT1 HELLS	1.60e-06	1449	130	26	int:EFTUD2
Interaction	RPS24 interactions	NCAPD3 NCL CHD3 CCDC168 HUWE1 LYAR HP1BP3 EIF3CL EFTUD2 RPL23 MFAP1 DDX18 CTNNBL1 EIF3C UTP3	1.68e-06	529	130	15	int:RPS24
Interaction	PHLPP1 interactions	HAUS6 MAP4 SYNM GTSE1 CKAP5 CHD3 MFAP1 RUVBL1 PA2G4 AHNAK SF3B2 MPP7	1.71e-06	333	130	12	int:PHLPP1
Interaction	H1-5 interactions	MAP4 NCL CCDC168 USP16 PPP4R3A HP1BP3 EIF3CL EFTUD2 MFAP1 SLC4A1AP WDR87 UTP3 SF3B2 HELLS	1.81e-06	463	130	14	int:H1-5
Interaction	RPS7 interactions	ATRX SRPRA NCL CHD3 HUWE1 RFC1 EFTUD2 RPL23 WDR87 DDX18 NEMF IK SF3B2 NUP153	1.95e-06	466	130	14	int:RPS7
Interaction	CUL7 interactions	DHX16 MAP1A NCL THOC2 HP1BP3 ARPC2 EFTUD2 RPL23 SAFB RUVBL1 PA2G4 AHNAK DDX18 RPF2 SAFB2 RBM6 IK SPEN SF3B2	2.06e-06	845	130	19	int:CUL7
Interaction	PML interactions	SETX ATRX MAP1A MAP4 GTSE1 SRPRA NCL THOC2 HP1BP3 CCNT1 SAFB ZNF608 SLC4A1AP AHNAK RPF2 SLTM UHRF1 EIF3C IK HELLS	2.23e-06	933	130	20	int:PML
Interaction	TAF15 interactions	CHD3 THOC2 EFTUD2 CCNT1 MFAP1 SAFB RUVBL1 SLTM SAFB2 CCAR1 ACAA2 IK SF3B2	2.44e-06	408	130	13	int:TAF15
Interaction	KDM1A interactions	KDM5B HAUS6 CKAP5 CHD3 HUWE1 THOC2 DNAJC6 EFTUD2 FAM193A ZNF608 SLC4A1AP AHNAK KDM2B UHRF1 ZFHX3 IK TADA3 SF3B2 CCDC93 DNMT1	2.54e-06	941	130	20	int:KDM1A
Interaction	SRPK1 interactions	CDKL3 NCL LYAR HP1BP3 EFTUD2 MFAP1 SAFB SERPINB10 SLC4A1AP DDX18 RPF2 HDGFL2 SF3B2 HELLS	2.56e-06	477	130	14	int:SRPK1
Interaction	KPNA1 interactions	CHD3 HUWE1 LYAR POLR1G EFTUD2 SARS1 RUVBL1 CTNNBL1 CCAR1 UHRF1 TADA3 NUP153	2.95e-06	351	130	12	int:KPNA1
Interaction	PYHIN1 interactions	DHX16 ATRX CKAP5 HUWE1 LYAR HP1BP3 SAFB SAFB2 SPEN HDGFL2 SF3B2 DNMT1	3.62e-06	358	130	12	int:PYHIN1
Interaction	IFI27L1 interactions	DHX16 MFAP1 SAFB SLTM SAFB2 IK	3.88e-06	65	130	6	int:IFI27L1
Interaction	H3C3 interactions	SETX ATRX ARID4A CHD3 RFC1 LYAR HP1BP3 ORC2 KDM2B UHRF1 SPEN HDGFL2 DNMT1 HELLS	3.92e-06	495	130	14	int:H3C3
Interaction	SRP9 interactions	SRPRA NCL HUWE1 RFC1 LYAR HP1BP3 EFTUD2 SLC4A1AP PA2G4 DDX18 SDC3 EIF3C SF3B2	4.01e-06	427	130	13	int:SRP9
Interaction	RPS16 interactions	CKAP5 SRPRA NCL CHD3 HUWE1 RFC1 LYAR USP16 HP1BP3 EFTUD2 RPL23 CCNT1 PA2G4 NEMF EIF3C UTP3 SF3B2	4.22e-06	724	130	17	int:RPS16
Interaction	NIFK interactions	NCL CHD3 RFC1 LYAR POLR1G EFTUD2 RPL23 MFAP1 DDX18 RPF2 UTP3 IK SPTY2D1	4.43e-06	431	130	13	int:NIFK
Interaction	MCM4 interactions	ATRX HUWE1 PPP4R3A EFTUD2 ORC2 SAFB SLC4A1AP NEMF SF3B2 NUP153 HELLS	4.84e-06	306	130	11	int:MCM4
Interaction	SNRNP70 interactions	CDKL3 NCL CHD3 RFC1 LYAR THOC2 HP1BP3 EFTUD2 RPL23 CCNT1 SAFB RUVBL1 DDX18 RPF2 SLTM CTNNBL1 SAFB2 CCAR1 IK SF3B2	4.97e-06	984	130	20	int:SNRNP70
Interaction	EED interactions	NCAPD3 SETX CKAP5 CHD2 NCL CHD3 HUWE1 THOC2 HP1BP3 ARPC2 EFTUD2 RPL23 SAFB RUVBL1 DDX18 RPF2 AEBP2 SLTM SAFB2 CCAR1 KDM2B IK SPEN DNMT1 HELLS	5.03e-06	1445	130	25	int:EED
Interaction	FZR1 interactions	NCAPD3 MAP4 CKAP5 ARHGEF12 SRPRA NCL HUWE1 RFC1 LYAR EIF3CL EFTUD2 RPL23 RUVBL1 PA2G4 ALDH1L2 CTNNBL1 UHRF1 UTP3 SF3B2 NUP153 DNMT1 HELLS	5.68e-06	1172	130	22	int:FZR1
Interaction	APEX1 interactions	DHX16 ARID4A NCL RFC1 LYAR THOC2 PPP4R3A HP1BP3 EFTUD2 MFAP1 PTPDC1 SAFB FAM193A CLVS2 AHNAK CCAR1 UHRF1 RPGR UTP3 IK HDGFL2 DNMT1 HELLS	6.17e-06	1271	130	23	int:APEX1
Interaction	CDK1 interactions	NCAPD3 MAP4 ARID4A CKAP5 NCL IDH2 HUWE1 USP16 PPP4R3A EFTUD2 CCNT1 MFAP1 SAFB SAFB2 ACAA2	6.32e-06	590	130	15	int:CDK1
Interaction	SNW1 interactions	ATRX CKAP5 CHD3 HUWE1 EFTUD2 ORC2 CCNT1 MFAP1 SARS1 RUVBL1 AHNAK CTNNBL1 RBM6 IK SF3B2 NUP153 HELLS	6.38e-06	747	130	17	int:SNW1
Interaction	RPA4 interactions	HAUS6 MAP4 NCL PPP4R3A SAFB RUVBL1 AHNAK SLTM SAFB2 EIF3C IK SF3B2 NUP153	7.40e-06	452	130	13	int:RPA4
Interaction	CHD3 interactions	KDM5B SETX NCL CHD3 RFC1 LYAR HP1BP3 EFTUD2 RPL23 SAFB RUVBL1 DDX18 CCAR1 ZFHX3 EIF3C IK SF3B2	7.60e-06	757	130	17	int:CHD3
Interaction	GNL2 interactions	DHX16 MAP1A CHD3 RFC1 LYAR POLR1G EFTUD2 RPL23 MFAP1 DDX18 RPF2 NEMF	7.77e-06	386	130	12	int:GNL2
Interaction	H2BC12 interactions	ATRX MAP4 CKAP5 NCL CHD3 HUWE1 USP16 HP1BP3 AKAP4 AHNAK SLTM	7.84e-06	322	130	11	int:H2BC12
Interaction	RPL31 interactions	DHX16 NCAPD3 SRPRA NCL CHD3 RFC1 LYAR EFTUD2 RPL23 MFAP1 DDX18 RPF2 UTP3 IK SPTY2D1 HELLS	8.07e-06	680	130	16	int:RPL31
Interaction	HTATSF1 interactions	NCL CHD3 EFTUD2 CCNT1 IK SPEN HDGFL2 SF3B2	8.25e-06	157	130	8	int:HTATSF1
Interaction	RPL5 interactions	SRPRA NCL CHD3 HUWE1 RFC1 LYAR POLR1G HP1BP3 EFTUD2 RPL23 PA2G4 DDX18 RPF2 NEMF EIF3C	8.70e-06	606	130	15	int:RPL5
Interaction	SSRP1 interactions	SETX ATRX CHD2 CHD3 HUWE1 RFC1 LYAR POLR1G EFTUD2 SAFB SLTM SAFB2 CCAR1 UHRF1 HDGFL2 SPTY2D1	8.85e-06	685	130	16	int:SSRP1
Interaction	THOC1 interactions	GTSE1 POLR1G THOC2 MFAP1 SLC4A1AP RBM6 IK SPEN SF3B2	9.05e-06	210	130	9	int:THOC1
Interaction	FBXW7 interactions	DHX16 TRPM7 MAP4 NCL HUWE1 RFC1 LYAR THOC2 HP1BP3 SARS1 RUVBL1 PA2G4 AHNAK AFG3L2 RPF2 NEMF UHRF1 C3 HDGFL2 SF3B2 DNMT1 HELLS	1.00e-05	1215	130	22	int:FBXW7
Interaction	PRPF8 interactions	MAP4 NCL CHD3 HUWE1 THOC2 EFTUD2 RPL23 MFAP1 RUVBL1 SLC4A1AP PA2G4 AHNAK RBM6 UHRF1 IK SPEN SF3B2	1.05e-05	776	130	17	int:PRPF8
Interaction	BAP1 interactions	PCBP3 MAP4 CETN2 KDM5C CKAP5 NCL IDH2 HUWE1 RFC1 LYAR POLR1G EIF3CL EFTUD2 RPL23 SARS1 RUVBL1 PA2G4 ALDH1L2 AHNAK NEMF HDGFL2 SF3B2 NUP153	1.06e-05	1314	130	23	int:BAP1
Interaction	IK interactions	CHD3 POLR1G THOC2 EFTUD2 MFAP1 CTNNBL1 SAFB2 IK SPEN	1.09e-05	215	130	9	int:IK
Interaction	ATXN1 interactions	PCBP3 MAP4 MAGEB18 CKAP5 NCL IDH2 HUWE1 HP1BP3 ARPC2 EFTUD2 RPL23 CCNT1 SARS1 KIAA1549L DDX18 CCAR1 UHRF1 SPEN HDGFL2 DNMT1	1.11e-05	1039	130	20	int:ATXN1
Interaction	RNF2 interactions	KDM5C NCL CHD3 HUWE1 LYAR POLR1G THOC2 HP1BP3 EFTUD2 MFAP1 RUVBL1 DDX18 AFG3L2 RPF2 KDM2B UHRF1 IK SF3B2	1.15e-05	866	130	18	int:RNF2
Interaction	RBM39 interactions	PCBP3 ATRX NCL CHD3 HP1BP3 EFTUD2 RPL23 MFAP1 SAFB RUVBL1 SLC4A1AP PA2G4 RPF2 CTNNBL1 SAFB2 RBM6 CCAR1 EIF3C IK SF3B2	1.16e-05	1042	130	20	int:RBM39
Interaction	RIT1 interactions	DHX16 NCAPD3 HAUS6 TRPM7 CKAP5 NCL POLR1G EIF3CL EFTUD2 MFAP1 SARS1 RUVBL1 DDX18 AFG3L2 RPF2 SAFB2 UHRF1 EIF3C UTP3 IK SF3B2 DNMT1	1.22e-05	1230	130	22	int:RIT1
Interaction	SUPT5H interactions	SETX ATRX NCL CHD3 POLR1G PPP4R3A EFTUD2 CCNT1 SAFB2 KDM2B IK SPEN	1.35e-05	408	130	12	int:SUPT5H
Interaction	EMC2 interactions	MAP4 RFC1 TRDN ADARB2 EFTUD2 AHNAK SAFB2 RBM6 CCAR1 HDGFL2 SF3B2 HELLS	1.46e-05	411	130	12	int:EMC2
Interaction	BRD7 interactions	DHX16 NCAPD3 MAP4 CKAP5 SRPRA NCL HUWE1 RFC1 THOC2 EFTUD2 DDX18 AFG3L2 RPF2 NEMF DNMT1	1.57e-05	637	130	15	int:BRD7
Interaction	ATG16L1 interactions	MAP1A MAP4 CKAP5 SRPRA NCL CCDC168 RPL23 SAFB FAM193A RUVBL1 PA2G4 AFG3L2 RPF2 SLTM CTNNBL1 SAFB2 CCAR1 C3 EIF3C IK DNMT1	1.67e-05	1161	130	21	int:ATG16L1
Interaction	SMC1A interactions	ATRX CKAP5 CHD2 NCL CHD3 HUWE1 RFC1 POLR1G EFTUD2 ZNF608 NEMF RPGR	1.72e-05	418	130	12	int:SMC1A
Interaction	NOP56 interactions	DHX16 ATRX NCL CHD3 RFC1 LYAR POLR1G EFTUD2 RPL23 MFAP1 DDX18 NEMF UTP3 SPTY2D1	1.93e-05	570	130	14	int:NOP56
Interaction	GPATCH4 interactions	CHD3 LYAR POLR1G ADARB2 HP1BP3 EFTUD2 MFAP1 RPF2 SPTY2D1	2.00e-05	232	130	9	int:GPATCH4
GeneFamily	DNA helicases	CHD2 NCL RUVBL1 HELLS	5.59e-07	17	73	4	1167
GeneFamily	AT-rich interaction domain containing	KDM5B ARID4A KDM5C	2.77e-05	15	73	3	418
GeneFamily	PHD finger proteins	KDM5B KDM5C CHD3 KDM2B UHRF1	3.14e-05	90	73	5	88
GeneFamily	PHD finger proteins\|Lysine demethylases	KDM5B KDM5C KDM2B	1.20e-04	24	73	3	485
GeneFamily	RNA binding motif containing	NCL SAFB SLTM SAFB2 RBM6 SPEN	2.20e-04	213	73	6	725
GeneFamily	Zinc fingers CXXC-type	KDM2B DNMT1	1.03e-03	12	73	2	136
GeneFamily	AAA ATPases	RFC1 RUVBL1 AFG3L2	1.28e-03	53	73	3	413
GeneFamily	X-linked mental retardation\|Angiotensin receptors	ATRX KDM5C THOC2	1.28e-03	53	73	3	103
Coexpression	MARTORIATI_MDM4_TARGETS_FETAL_LIVER_DN	ATRX SHOX2 SRPRA NCL USP16 HP1BP3 BNC1 DDX18 NEMF SAFB2 CCAR1 ALCAM UTP3	2.15e-06	519	131	13	M3395
Coexpression	MARTORIATI_MDM4_TARGETS_FETAL_LIVER_DN	ATRX SHOX2 SRPRA NCL USP16 HP1BP3 BNC1 DDX18 NEMF SAFB2 CCAR1 ALCAM UTP3	3.51e-06	543	131	13	MM997
Coexpression	ZAK_PBMC_MRKAD5_HIV_1_GAG_POL_NEF_AGE_20_50YO_CORRELATED_WITH_CD8_T_CELL_RESPONSE_3DY_POSITIVE	HAUS6 ATRX TRPM7 ARID4A CCNT1 ANKRD12	4.10e-06	84	131	6	M40895
Coexpression	GSE38696_LIGHT_ZONE_VS_DARK_ZONE_BCELL_UP	ARHGEF12 CHD2 NCL CHD3 THOC2 USP16 SPTY2D1 MPP7	4.20e-06	184	131	8	M9005
Coexpression	KINSEY_TARGETS_OF_EWSR1_FLII_FUSION_UP	FNIP2 HAUS6 GTSE1 DAB1 CKAP5 GRIK2 RFC1 SMCO4 ARPC2 GPALPP1 ORC2 PACRGL SAFB RUVBL1 PA2G4 DDX18 UHRF1 NUP153 DNMT1 HELLS	6.45e-06	1290	131	20	M80
Coexpression	DACOSTA_UV_RESPONSE_VIA_ERCC3_DN	KDM5B SETX ATRX ARID4A CKAP5 THOC2 ORC2 FAM193A RBM6 ZFHX3 ALCAM RPGR SPEN NUP153 CCDC93	2.56e-05	856	131	15	M4500
Coexpression	HE_LIM_SUN_FETAL_LUNG_C2_CYCLING_DC_CELL	NCAPD3 HAUS6 OPN3 CETN2 GTSE1 CKAP5 RFC1 LYAR POLR1G GPALPP1 ORC2 RUVBL1 OGFOD1 UHRF1 ACAA2 ALCAM UTP3 HDGFL2 NUP153 HELLS	2.67e-05	1423	131	20	M45722
Coexpression	HE_LIM_SUN_FETAL_LUNG_C5_LARGE_PRE_B_CELL	NCAPD3 HAUS6 GTSE1 CKAP5 RFC1 LYAR SMCO4 EFTUD2 MFAP1 RUVBL1 SLC4A1AP AFG3L2 CTNNBL1 OGFOD1 UHRF1 ACAA2 HDGFL2 DNMT1 HELLS	4.84e-05	1363	131	19	M45782
Coexpression	TABULA_MURIS_SENIS_LIVER_ENDOTHELIAL_CELL_OF_HEPATIC_SINUSOID_AGEING	ATRX MAP4 ARID4A ARHGEF12 NCL HP1BP3 RPL23 DDX18 SDC3 IK	4.96e-05	418	131	10	MM3752
Coexpression	MARSON_BOUND_BY_E2F4_UNSTIMULATED	NCAPD3 HAUS6 ATRX OPN3 GTSE1 POLR1G MFAP1 UHRF1 UTP3 HDGFL2 NUP153 DNMT1 HELLS	6.22e-05	714	131	13	M1744
Coexpression	HAY_BONE_MARROW_ERYTHROBLAST	NCAPD3 HAUS6 CKAP5 ARHGEF12 NCL IDH2 RFC1 POLR1G DNAJC6 ORC2 MFAP1 RUVBL1 PA2G4 AFG3L2 RPF2 ACAA2 IK DNMT1	6.38e-05	1271	131	18	M39197
Coexpression	GSE22140_HEALTHY_VS_ARTHRITIC_MOUSE_CD4_TCELL_DN	NCAPD3 AHNAK ACAA2 ALCAM RPGR TADA3 CCDC93	6.60e-05	199	131	7	M7651
Coexpression	GSE21063_CTRL_VS_ANTI_IGM_STIM_BCELL_16H_UP	CACNA1S HAUS6 IDH2 HP1BP3 ORC2 ALDH1L2 DNMT1	6.60e-05	199	131	7	M8266
Coexpression	GSE29617_CTRL_VS_DAY3_TIV_FLU_VACCINE_PBMC_2008_DN	FNIP2 THOC2 ARPC2 EFTUD2 ZNF816 ACAA2 TADA3	6.60e-05	199	131	7	M4929
Coexpression	GSE17721_LPS_VS_GARDIQUIMOD_24H_BMDC_UP	KDM5B ADARB2 PACRGL SVBP ACAA2 ALCAM UTP3	6.60e-05	199	131	7	M4063
Coexpression	MILI_PSEUDOPODIA_HAPTOTAXIS_UP	ATRX SHOX2 SMCO4 USP16 ORC2 MFAP1 SLC4A1AP RPF2 NEMF SLTM MPP7	6.62e-05	523	131	11	M12707
Coexpression	GSE23502_WT_VS_HDC_KO_MYELOID_DERIVED_SUPPRESSOR_CELL_BM_UP	ATRX ARID4A CDKL3 IDH2 RFC1 ZNF608 ALCAM	6.81e-05	200	131	7	M8090
Coexpression	GSE16385_MONOCYTE_VS_MACROPHAGE_DN	CDKL3 PPP4R4 MFAP1 KIAA1549L RPF2 CCAR1 ST18	6.81e-05	200	131	7	M7901
Coexpression	HALLMARK_E2F_TARGETS	RFC1 LYAR ORC2 PA2G4 NUP153 DNMT1 HELLS	6.81e-05	200	131	7	M5925
Coexpression	MILI_PSEUDOPODIA_HAPTOTAXIS_UP	ATRX SHOX2 SMCO4 USP16 ORC2 MFAP1 SLC4A1AP RPF2 NEMF SLTM MPP7	7.96e-05	534	131	11	MM1054
Coexpression	MENON_FETAL_KIDNEY_0_CAP_MESENCHYME_CELLS	ATRX NCL SPEN SF3B2 DNMT1	9.03e-05	90	131	5	M39250
Coexpression	NAKAYA_PBMC_FLUARIX_FLUVIRIN_AGE_18_50YO_CORRELATED_WITH_HAI_28DY_RESPONSE_AT_3DY_NEGATIVE	ATRX CETN2 CHD2 THOC2 USP16 PPP4R3A CCNT1 ANKRD12 SPTY2D1	9.11e-05	363	131	9	M41103
Coexpression	FLECHNER_PBL_KIDNEY_TRANSPLANT_OK_VS_DONOR_UP	CHD3 RPL23 SARS1 PA2G4 AHNAK IK	1.27e-04	154	131	6	M19681
Coexpression	MANNO_MIDBRAIN_NEUROTYPES_HGABA	ARPP21 ATRX ARID4A ARHGEF12 SHOX2 GRIK2 CHD3 DNAJC6 ADARB2 KIAA1549L CLVS2 ZNF816 KDM2B SDC3 ZFHX3 ANKRD12	1.32e-04	1106	131	16	M39071
Coexpression	TABULA_MURIS_SENIS_KIDNEY_KIDNEY_COLLECTING_DUCT_PRINCIPAL_CELL_AGEING	ATRX CHD3 THOC2 EIF3CL RPL23 AHNAK SLTM ZFHX3 EIF3C	1.69e-04	394	131	9	MM3724
Coexpression	GSE37534_GW1929_VS_ROSIGLITAZONE_TREATED_CD4_TCELL_PPARG1_FOXP3_TRANSDUCED_DN	CCDC28A NCL PTPDC1 FAM193A SPEN MPP7	1.80e-04	164	131	6	M8989
Coexpression	TABULA_MURIS_SENIS_LIMB_MUSCLE_T_CELL_AGEING	CHD2 NCL SMCO4 AHNAK AEBP2 PNRC1 SPTY2D1	1.90e-04	236	131	7	MM3743
Coexpression	BRUINS_UVC_RESPONSE_EARLY_LATE	ATRX MAP1A MAP4 CHD2 GRIK2 SLC4A1AP AHNAK RBM6	1.96e-04	316	131	8	M2248
Coexpression	GSE4590_SMALL_VS_VPREB_POS_LARGE_PRE_BCELL_UP	KDM5B ARID4A CCDC28A AFG3L2 ALCAM EIF3C	2.05e-04	168	131	6	M6874
Coexpression	BRUINS_UVC_RESPONSE_EARLY_LATE	ATRX MAP1A MAP4 CHD2 GRIK2 SLC4A1AP AHNAK RBM6	2.13e-04	320	131	8	MM1063
CoexpressionAtlas	facebase_RNAseq_e10.5_Emin_LatNas_2500_K3	HAUS6 SETX ATRX TRPM7 ARID4A DAB1 CKAP5 NCL RFC1 LYAR THOC2 USP16 ORC2 FAM193A KIAA1549L SLC4A1AP RPF2 NEMF SLTM CCAR1 ZFHX3 SMO RPGR UTP3 DNMT1 HELLS	2.69e-08	1257	128	26	facebase_RNAseq_e10.5_Emin_LatNas_2500_K3
CoexpressionAtlas	FacebaseRNAseq_e10.5_Neural Epithelium Flanking Eminence_top-relative-expression-ranked_1000_k-means-cluster#2	ATRX ARID4A CKAP5 CHD2 NCL LYAR WDR19 SAFB FAM193A NEMF SLTM CCAR1 RPGR	5.21e-08	311	128	13	Facebase_RNAseq_e10.5_Neural Epithelium Flanking Eminence_1000_K2
CoexpressionAtlas	FacebaseRNAseq_e8.5_Hind Brain Neural Epithelium_top-relative-expression-ranked_2500_k-means-cluster#3	HAUS6 SETX DAB1 CKAP5 NCL LYAR USP16 PPP4R3A SAFB RPF2 NEMF SLTM RBM6 EIF3C UTP3 DNMT1	1.36e-07	532	128	16	Facebase_RNAseq_e8.5_Hind Brain Neural Epithelium_2500_K3
CoexpressionAtlas	facebase_RNAseq_e10.5_Emin_LatNas_2500	HAUS6 SETX ATRX TRPM7 ARID4A DAB1 CKAP5 GRIK2 NCL RFC1 LYAR THOC2 USP16 ORC2 FAM193A KIAA1549L SLC4A1AP RPF2 NEMF SLTM CCAR1 ZFHX3 SMO RPGR UTP3 DNMT1 HELLS	1.36e-07	1459	128	27	facebase_RNAseq_e10.5_Emin_LatNas_2500
CoexpressionAtlas	FacebaseRNAseq_e10.5_Neural Epithelium Flanking Eminence_top-relative-expression-ranked_500_k-means-cluster#3	ATRX ARID4A CKAP5 NCL LYAR SAFB KIAA1549L NEMF SLTM CCAR1	2.60e-07	192	128	10	Facebase_RNAseq_e10.5_Neural Epithelium Flanking Eminence_500_K3
CoexpressionAtlas	FacebaseRNAseq_e10.5_Neural Epithelium Flanking Eminence_top-relative-expression-ranked_500	ATRX MAP1A ARID4A CKAP5 GRIK2 NCL LYAR POLR1G SAFB KIAA1549L NEMF SLTM CCAR1 ST18 MPP7	3.37e-07	498	128	15	Facebase_RNAseq_e10.5_Neural Epithelium Flanking Eminence_500
CoexpressionAtlas	FacebaseRNAseq_e10.5_Neural Epithelium Flanking Eminence_top-relative-expression-ranked_1000	ATRX MAP1A ARID4A CKAP5 CHD2 GRIK2 NCL LYAR POLR1G WDR19 SAFB FAM193A KIAA1549L NEMF SLTM CCAR1 UHRF1 RPGR ST18 MPP7	1.92e-06	989	128	20	Facebase_RNAseq_e10.5_Neural Epithelium Flanking Eminence_1000
CoexpressionAtlas	FacebaseRNAseq_e10.5_Neural Epithelium Flanking Eminence_top-relative-expression-ranked_2500_k-means-cluster#5	ATRX ARID4A CKAP5 CHD2 NCL HUWE1 LYAR WDR19 MFAP1 SAFB FAM193A KIAA1549L SLC4A1AP NEMF SLTM SAFB2 CCAR1 MPP7	2.56e-06	831	128	18	Facebase_RNAseq_e10.5_Neural Epithelium Flanking Eminence_2500_K5
CoexpressionAtlas	FacebaseRNAseq_e8.5_Floor Plate_top-relative-expression-ranked_2500_k-means-cluster#1	SETX ATRX ARID4A CKAP5 NCL LYAR CCNT1 NEMF SLTM RBM6 CCAR1 EIF3C UTP3	5.32e-06	469	128	13	Facebase_RNAseq_e8.5_Floor Plate_2500_K1
CoexpressionAtlas	FacebaseRNAseq_e10.5_Neural Epithelium Overlying Lateral Eminence_top-relative-expression-ranked_1000	HAUS6 ARPP21 MAP1A SYNM DAB1 CKAP5 CHD2 GRIK2 NCL LYAR WDR19 SAFB KIAA1549L SLC4A1AP NEMF SLTM CCAR1 UTP3 ST18	6.84e-06	983	128	19	Facebase_RNAseq_e10.5_Neural Epithelium Overlying Lateral Eminence_1000
CoexpressionAtlas	alpha beta T cells, T.ISP.Th, 4- 8+ TCR-/lo 24hi, Thymus, avg-3	NCAPD3 HAUS6 ARPP21 GTSE1 CKAP5 LYAR DNAJC6 PA2G4 UHRF1 SMO MPP7 HELLS	8.57e-06	417	128	12	GSM399403_500
CoexpressionAtlas	FacebaseRNAseq_e10.5_Lateral Nasal Eminence_top-relative-expression-ranked_2500_k-means-cluster#1	ATRX MAP4 ARID4A ARHGEF12 CHD2 NCL HUWE1 LYAR HP1BP3 WDR19 MFAP1 FAM193A SLC4A1AP SAFB2 CCAR1 IK	1.90e-05	780	128	16	Facebase_RNAseq_e10.5_Lateral Nasal Eminence_2500_K1
CoexpressionAtlas	facebase_RNAseq_e8.5_NeuroEpith_hindBrain_2500_K1	HAUS6 PCBP3 DAB1 CKAP5 NCL RFC1 LYAR POLR1G ORC2 CCNT1 KIAA1549L PA2G4 DDX18 RPF2 NEMF SLTM KDM2B UHRF1 SMO HELLS	2.14e-05	1164	128	20	facebase_RNAseq_e8.5_NeuroEpith_hindBrain_2500_K1
CoexpressionAtlas	FacebaseRNAseq_ratio_e10.5_MaxillaryArch_vs_Mandibular_top-relative-expression-ranked_1000_k-means-cluster#1	MAP1A DAB1 GRIK2 CHD3 KIAA1549L ACAA2 ANKRD12 ST18 TADA3	2.48e-05	255	128	9	Facebase_RNAseq_ratio_e10.5_MaxillaryArch_vs_Mandibular_1000_K1
CoexpressionAtlas	FacebaseRNAseq_e9.5_Mandibular Arch_top-relative-expression-ranked_1000_k-means-cluster#4	HAUS6 ATRX ARID4A ARHGEF12 NCL LYAR PNRC1 RPGR	3.26e-05	203	128	8	Facebase_RNAseq_e9.5_Mandibular Arch_1000_K4
CoexpressionAtlas	FacebaseRNAseq_e10.5_Neural Epithelium Overlying Lateral Eminence_top-relative-expression-ranked_2500_k-means-cluster#5	DAB1 CKAP5 CHD2 LYAR WDR19 PTPDC1 SAFB KIAA1549L SLC4A1AP NEMF SLTM ANKRD12 ALCAM UTP3	4.13e-05	654	128	14	Facebase_RNAseq_e10.5_Neural Epithelium Overlying Lateral Eminence_2500_K5
CoexpressionAtlas	DevelopingGonad_e18.5_ovary_emap-12283_k-means-cluster#2_top-relative-expression-ranked_1000	ATRX TRPM7 MAP4 CHD2 THOC2 ANKRD12 NUP153 HELLS	4.15e-05	210	128	8	gudmap_developingGonad_e18.5_ovary_1000_k2
CoexpressionAtlas	facebase_RNAseq_e8.5_FloorPlate_2500_K3	HAUS6 OPN3 DAB1 CKAP5 NCL RFC1 LYAR POLR1G TULP1 KIAA1549L ZNF608 PA2G4 DDX18 RPF2 SLTM CTNNBL1 CCAR1 UHRF1 SMO UTP3 HELLS	6.97e-05	1371	128	21	facebase_RNAseq_e8.5_FloorPlate_2500_K3
CoexpressionAtlas	FacebaseRNAseq_e10.5_Medial Nasal Eminence_top-relative-expression-ranked_1000	SETX ARPP21 ATRX TRPM7 SYNM CDKL3 CKAP5 SHOX2 GRIK2 NCL GPR179 TULP1 PTPDC1 KIAA1549L SLTM RPGR ST18	8.30e-05	979	128	17	Facebase_RNAseq_e10.5_Medial Nasal Eminence_1000
CoexpressionAtlas	FacebaseRNAseq_e10.5_Maxillary Arch_top-relative-expression-ranked_2500_k-means-cluster#5	ATRX ARID4A CKAP5 ARHGEF12 CHD2 NCL PTPDC1 PRDM11 KIAA1549L SLTM CCAR1 PNRC1 MPP7	1.12e-04	629	128	13	Facebase_RNAseq_e10.5_Maxillary Arch_2500_K5
CoexpressionAtlas	FacebaseRNAseq_e10.5_Mandibular Arch_top-relative-expression-ranked_500_k-means-cluster#5	CHD2 NCL LYAR THOC2 WDR19 SLTM CCAR1	1.37e-04	186	128	7	Facebase_RNAseq_e10.5_Mandibular Arch_500_K5
CoexpressionAtlas	facebase_RNAseq_e8.5_NeuroEpith_hindBrain_2500	HAUS6 PCBP3 DAB1 CKAP5 NCL RFC1 LYAR POLR1G ORC2 CCNT1 KIAA1549L PA2G4 DDX18 RPF2 NEMF SLTM KDM2B UHRF1 SMO HELLS	1.61e-04	1347	128	20	facebase_RNAseq_e8.5_NeuroEpith_hindBrain_2500
CoexpressionAtlas	alpha beta T cells, preT.DN3B.Th, Lin-/lo CD25hi CD44- CD28+, Thymus, avg-3	ARPP21 DNAJC6 UHRF1 SMO HELLS	1.83e-04	87	128	5	GSM791149_100
CoexpressionAtlas	FacebaseRNAseq_e10.5_Neural Epithelium Overlying Lateral Eminence_top-relative-expression-ranked_500	ARPP21 MAP1A DAB1 CKAP5 GRIK2 NCL LYAR KIAA1549L NEMF SLTM ST18	2.00e-04	493	128	11	Facebase_RNAseq_e10.5_Neural Epithelium Overlying Lateral Eminence_500
CoexpressionAtlas	DevelopingGonad_e14.5_ epididymis_emap-29141_k-means-cluster#3_top-relative-expression-ranked_1000	ATRX TRPM7 MAP4 KDM5C CHD2 THOC2 ANKRD12 HELLS	2.68e-04	275	128	8	gudmap_developingGonad_e14.5_ epididymis_1000_k3
CoexpressionAtlas	DevelopingGonad_e12.5_epididymis_emap-29139_k-means-cluster#5_top-relative-expression-ranked_500	ATRX TRPM7 MAP4 CHD2 THOC2 HELLS	3.00e-04	150	128	6	gudmap_developingGonad_e12.5_epididymis_k5_500
CoexpressionAtlas	FacebaseRNAseq_e10.5_Medial Nasal Eminence_top-relative-expression-ranked_1000_k-means-cluster#4	SETX ATRX TRPM7 CKAP5 NCL PTPDC1 SLTM RPGR	4.57e-04	298	128	8	Facebase_RNAseq_e10.5_Medial Nasal Eminence_1000_K4
CoexpressionAtlas	facebase_RNAseq_e10.5_MandArch_2500_K1	HAUS6 SETX ATRX TRPM7 CDKL3 CKAP5 NCL LYAR THOC2 USP16 ORC2 KIAA1549L RPF2 NEMF SLTM CCAR1 ZFHX3 RPGR	4.68e-04	1241	128	18	facebase_RNAseq_e10.5_MandArch_2500_K1
CoexpressionAtlas	facebase_RNAseq_e10.5_MaxArch_2500_K3	HAUS6 SETX ATRX TRPM7 ARID4A CKAP5 NCL RFC1 LYAR THOC2 PPP4R3A ORC2 SLTM CCAR1 ZFHX3 SMO ANKRD12 RPGR	5.19e-04	1252	128	18	facebase_RNAseq_e10.5_MaxArch_2500_K3
CoexpressionAtlas	FacebaseRNAseq_e9.5_Mandibular Arch_top-relative-expression-ranked_2500_k-means-cluster#2	FNIP2 HAUS6 ATRX ARID4A CHD2 NCL LYAR THOC2 PNRC1 ZFHX3 RPGR	6.22e-04	564	128	11	Facebase_RNAseq_e9.5_Mandibular Arch_2500_K2
CoexpressionAtlas	FacebaseRNAseq_e9.5_Mandibular Arch_top-relative-expression-ranked_2500_k-means-cluster#3	CETN2 ARHGEF12 GRIK2 SARS1 SPEN ST18 MPP7 HELLS	6.45e-04	314	128	8	Facebase_RNAseq_e9.5_Mandibular Arch_2500_K3
CoexpressionAtlas	alpha beta T cells, T.DPbl.Th, 4+ 8+ TCR-/lo FSChi, Thymus, avg-3	NCAPD3 ARPP21 GTSE1 CKAP5 DNAJC6 UHRF1 SMO MPP7 HELLS	7.00e-04	398	128	9	GSM399397_500
ToppCell	H1299-infected-SARSCoV2\|infected / Cell line, Condition and Strain	ATRX ARID4A CHD2 NCL LYAR THOC2 MFAP1 AHNAK DDX18 NEMF SLTM SAFB2 CCAR1 ANKRD12 DNMT1	2.97e-17	197	131	15	0fa3e4cf93e77d78b1f97b906c5b13ca741ae17e
ToppCell	TCGA-Colorectal-Primary_Tumor-Colorectal_Adenocarcinoma-Colon_Adenocarcinoma-4\|TCGA-Colorectal / Sample_Type by Project: Shred V9	CKAP5 NCL LYAR POLR1G SAFB PA2G4 RPF2 RBM6 UTP3	1.64e-09	166	131	9	52293b8a74d46e6161fb6a2e7e86e51fd9e89a5b
ToppCell	PND14-Endothelial-Endothelial_blood-vessel-Microvascular_EC-EPC-EPC_prolif\|PND14 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif	NCAPD3 GTSE1 CKAP5 PTPDC1 UHRF1 DNMT1 HELLS	7.91e-07	172	131	7	2b6cd84c946b1e800caba452ae70145ea285fec1
ToppCell	TCGA-Pancreas-Primary_Tumor-Pancreatic_Adenocarcinoma-Ductal_Adenocarcinoma-1\|TCGA-Pancreas / Sample_Type by Project: Shred V9	SETX ATRX ARID4A IYD ARHGEF12 ANKRD12 SPTY2D1	1.34e-06	186	131	7	03db813598b67b1e08f759758a1c2023396921fa
ToppCell	H1299-infected\|H1299 / Cell line, Condition and Strain	GTSE1 CHD2 POLR1G HP1BP3 SLTM CCAR1 ANKRD12	1.65e-06	192	131	7	9cf8049bdc3e0f81ce69042beac72b08d8f38b4e
ToppCell	HSPCs\|World / Lineage and Cell class	NCL IDH2 LYAR RUVBL1 PA2G4 DNMT1 HELLS	2.09e-06	199	131	7	df1ffc416c6946f1ba182f242a50ee41a571d565
ToppCell	Neuron-Postmitotic-Excitatory_Neuron_-Parietal_and_Temporal-6\|World / Primary Cells by Cluster	ARPP21 ATRX ARID4A ARHGEF12 NCL CHD3 ANKRD12	2.09e-06	199	131	7	1b1bccf4293f11048709d15a3c892c0edf3da3d2
ToppCell	Neuron-Postmitotic-Excitatory_Neuron_-Parietal_and_Temporal\|World / Primary Cells by Cluster	ARPP21 ATRX ARID4A ARHGEF12 NCL CHD3 ANKRD12	2.09e-06	199	131	7	4bee94c116c0da5eba951cb4cea7cc9dcdd6e30f
ToppCell	TCGA-Stomach-Primary_Tumor\|TCGA-Stomach / Sample_Type by Project: Shred V9	GTSE1 CKAP5 EFTUD2 DDX18 UHRF1 DNMT1 HELLS	2.09e-06	199	131	7	38f1f612b29feb868322999ceeda78e52447ec4f
ToppCell	TCGA-Stomach-Primary_Tumor-Stomach_Adenocarcinoma\|TCGA-Stomach / Sample_Type by Project: Shred V9	GTSE1 CKAP5 EFTUD2 DDX18 UHRF1 DNMT1 HELLS	2.09e-06	199	131	7	b10698aee2e6c17bc559eb4f723024141f914b90
ToppCell	COVID-19-Heart-CM_5_(RYR2-)\|COVID-19 / Disease (COVID-19 only), tissue and cell type	FAM184B CACNA1S ARPP21 SYNM PYDC1 TRDN	4.36e-06	144	131	6	f92e03dd784e31a9e5dbd4f4c3a6517ea19210cf
ToppCell	3'-Airway_Nasal-Epithelial-Airway_epithelium-brush_cell_of_trachebronchial_tree-Tuft\|3' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5	ARPP21 GTSE1 DAB1 IDH2 KIAA1549L ST18	9.51e-06	165	131	6	0ae39c9a6d1265d65dc0660924612cfe11e489ec
ToppCell	3'-Airway_Nasal-Epithelial-Airway_epithelium-brush_cell_of_trachebronchial_tree-Tuft-Tuft_L.0.7.1.0\|3' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5	ARPP21 GTSE1 DAB1 IDH2 KIAA1549L ST18	9.51e-06	165	131	6	686cf89077cc7b744a6127de2b34d8c27da8b6c4
ToppCell	3'-Airway_Nasal-Epithelial-Airway_epithelium-brush_cell_of_trachebronchial_tree\|3' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5	ARPP21 GTSE1 DAB1 IDH2 KIAA1549L ST18	9.51e-06	165	131	6	a5ed8c331d5551cd8bce50bdc31cb893218317cd
ToppCell	Control-B_intermediate-1\|Control / disease group and sub_cluster of B and Plasma cells(res = 0.5)	SETX PPP4R3A EIF3CL CCDC7 AHNAK EIF3C	1.02e-05	167	131	6	948504367ecf58144d9dd74d2ec531358fc4b309
ToppCell	E12.5-Mesenchymal-developing_mesenchymal_cell-mesenchymal_myogenic_precursor_(Axin2+)\|E12.5 / developmental_time, Lineage, Cell group, Cell type, Cell type_cellcyc-phase	NCL LYAR PA2G4 DDX18 RPF2 DNMT1	1.71e-05	183	131	6	523896bd1a93bdda81a009768baa3a1bdbd108b8
ToppCell	droplet-Marrow-nan-3m\|Marrow / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation	SETX ATRX HP1BP3 ZNF608 AHNAK PNRC1	1.76e-05	184	131	6	1154a5ad7b8512272b7476f949ddac350910bfb7
ToppCell	tumor_Lung-Fibroblasts-Mesothelial_cells\|tumor_Lung / Location, Cell class and cell subclass	DAB1 GRIK2 TRDN BNC1 KIAA1549L C3	1.76e-05	184	131	6	b0a251030d127858e68cf164be158f209a4d720f
ToppCell	CV-Moderate-7\|Moderate / Virus stimulation, Condition and Cluster	TRPM7 HUWE1 CCNT1 ALCAM SPEN HELLS	1.82e-05	185	131	6	a6c9203ce6c2892a4a369c9bcfb85720f01cbb3f
ToppCell	facs-Large_Intestine-Proximal-3m-Epithelial-Lgr5-_amplifying_undifferentiated_cell\|Large_Intestine / Large_Intestine_Pancreas_Liver - method, tissue, subtissue, age, lineage, cell ontology and free annotation	NCL RFC1 DDX18 UHRF1 DNMT1 HELLS	1.88e-05	186	131	6	15ab6666748a641226e42e6ca6eeaf186a501c95
ToppCell	CV-Moderate-7\|CV / Virus stimulation, Condition and Cluster	TRPM7 HUWE1 CCNT1 ALCAM SPEN HELLS	1.88e-05	186	131	6	8571956890fc9894d766ba294a28e376b4aba428
ToppCell	facs-Large_Intestine-Proximal-3m-Epithelial-epithelial_cell_of_large_intestine\|Large_Intestine / Large_Intestine_Pancreas_Liver - method, tissue, subtissue, age, lineage, cell ontology and free annotation	NCL RFC1 DDX18 UHRF1 DNMT1 HELLS	1.88e-05	186	131	6	4ed1b97e2552f3c4134f25665d7513498ffac16c
ToppCell	droplet-Large_Intestine-COLON_PROXIMAL-30m-Epithelial-intestinal_crypt_stem_cell\|Large_Intestine / Large_Intestine_Pancreas_Liver - method, tissue, subtissue, age, lineage, cell ontology and free annotation	NCL POLR1G RUVBL1 DDX18 RPF2 HELLS	2.11e-05	190	131	6	52c59001a079c76249abbaa3141e9e661b83d9a0
ToppCell	(02)_Cycling_Basal_(regeneration)\|World / shred by cell type and Timepoint	ATRX GTSE1 SERPINB10 UHRF1 DNMT1 HELLS	2.11e-05	190	131	6	53f017a11ca5ebe9025558e12cedc409cab2e5aa
ToppCell	PND10\|World / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif	ATRX MAP4 ARHGEF12 NCL AHNAK AEBP2	2.11e-05	190	131	6	d67e2814047c8df2ae4b7bc8be9539f5df6ecef2
ToppCell	pdx-Tumor_cells-T1\|Tumor_cells / Sample and Cell Type and Tumor Cluster (all cells)	NCAPD3 GTSE1 CKAP5 HP1BP3 UHRF1 HELLS	2.11e-05	190	131	6	d06ee5f89f1cec8db6897fe3b2a890a07cd3697b
ToppCell	CD8+_Memory_T_cell-CV-7\|CD8+_Memory_T_cell / cell class, Virus stimulation and cluster	TRPM7 HUWE1 CCNT1 ALCAM SPEN HELLS	2.18e-05	191	131	6	9454f642c3621370fa23640b631301346b300950
ToppCell	droplet-Marrow-BM_(NON-STC)-30m-Myeloid-Cd4_positive_Macrophages\|Marrow / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation	IDH2 LYAR RUVBL1 DDX18 RPF2 HELLS	2.18e-05	191	131	6	45023854f285ac465f23ea1b33c970e14992e709
ToppCell	droplet-Marrow-BM_(NON-STC)-30m-Myeloid-macrophage\|Marrow / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation	IDH2 LYAR RUVBL1 DDX18 RPF2 HELLS	2.18e-05	191	131	6	6890a8e4b4530987a5b044614fcd7e00716a4d66
ToppCell	TCGA-Prostate-Primary_Tumor-Prostate_Adenocarcinoma-Acinar_Adenocarcinoma-6\|TCGA-Prostate / Sample_Type by Project: Shred V9	KDM5B ATRX CKAP5 HUWE1 THOC2 SPTY2D1	2.31e-05	193	131	6	abd71b2cf667ef2b1c4d88acd0c1dd19a12ff659
ToppCell	PND07-Mesenchymal-Mesenchymal_myocytic-Myofibroblast_airway-SCMF-SCMF_prolif\|PND07 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif	DAB1 RFC1 PA2G4 UHRF1 DNMT1 HELLS	2.31e-05	193	131	6	f25bdd10ef531b8d8441ea84573078b4b1b0f105
ToppCell	(3)_MNP-(3)_Macrophage_Dividing\|(3)_MNP / Lung cell shreds - cell class (v4) and cell subclass (v4)	NCAPD3 ATRX GTSE1 CKAP5 UHRF1 HELLS	2.59e-05	197	131	6	048bc4f8fd5d4f394e2384700640f72042336597
ToppCell	myeloid-pro-pDC\|World / Lineage and Cell class	MAP1A OPN3 GTSE1 IDH2 UHRF1 HELLS	2.59e-05	197	131	6	8918ee006b16f6b86ed33ce1dd5c0f01f51f88f5
ToppCell	10x5'-blood-Lymphocytic_T_CD4/8-lo\|blood / Manually curated celltypes from each tissue	GTSE1 IDH2 LYAR UHRF1 DNMT1 HELLS	2.59e-05	197	131	6	acd678586aa0e4375bc8fbcdaa1a796c8dd23885
ToppCell	myeloid-CD34+_Monoblast\|myeloid / Lineage and Cell class	NCL SERPINB10 PA2G4 UHRF1 DNMT1 HELLS	2.67e-05	198	131	6	e26b98a8380e693110a97d8e5a353998f8d67c6d
ToppCell	B_cell_maturation-CD34+_pro-B\|B_cell_maturation / Lineage and Cell class	GTSE1 IDH2 PA2G4 UHRF1 DNMT1 HELLS	2.67e-05	198	131	6	5737606e5e3dc56f11fdf70166caf4ba4a81bc9d
ToppCell	droplet-Thymus-nan-18m-Lymphocytic-DN_to_DP_transition,_dividing_(more_DN)\|Thymus / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation	RFC1 LYAR UHRF1 SMO DNMT1 HELLS	2.67e-05	198	131	6	c78ff8fc71dfcba1ac0c373bc90ea7b87c5699a4
ToppCell	normal_Lung-T/NK_cells-Undetermined\|normal_Lung / Location, Cell class and cell subclass	NCAPD3 GTSE1 IDH2 UHRF1 DNMT1 HELLS	2.67e-05	198	131	6	c65cdb54409087014125a76627e5efb5fe8dabc9
ToppCell	(10)_Ciliated-(2)_GFP_FOXI1\|(10)_Ciliated / shred by cell type by condition	SETX USP16 NEMF ANKRD12 ALCAM RPGR	2.74e-05	199	131	6	61b1ed2db71b96157b92b7535d1955a4033098da
ToppCell	ILEUM-inflamed-(5)_Plasma-(5)_Plasmablasts\|(5)_Plasma / shred on tissue, inflammation_status, cell class(v3), cell subclass (v2)	GTSE1 LYAR ARPC2 PA2G4 UHRF1 HELLS	2.74e-05	199	131	6	624a807fae0a080a4e6755dcb374c25b6f2d2cfe
ToppCell	(00)_Basal-(2)_GFP_FOXI1\|(00)_Basal / shred by cell type by condition	SETX ATRX ARID4A RFC1 USP16 ANKRD12	2.74e-05	199	131	6	19674e1eaeb51e4196d847cb62aa437c852951d3
ToppCell	Fetal_brain-fetalBrain_Zhong_nature-GW13-Stem_cells\|GW13 / Sample Type, Dataset, Time_group, and Cell type.	FAM184B NCAPD3 PA2G4 UHRF1 NUP153 HELLS	2.74e-05	199	131	6	fd1d1b95e01719e3d0a17d9d1f29717a47209d32
ToppCell	10x3'2.3-week_12-13-Lymphocytic_B-B_lineage-pre_pro_B_progenitor\|week_12-13 / cell types per 3 fetal stages;per 3',per 5'	ARPP21 GTSE1 IDH2 UHRF1 DNMT1 HELLS	2.74e-05	199	131	6	8e7f9312dec1e3a92b6a0ccc7baa2d46e89c11f3
ToppCell	Bronchial-10x5prime-Immune_Myeloid-Macrophage_alveolar-Macro_alv_dividing\|10x5prime / Cell types per location group and 10X technology with lineage, and cell group designations	GTSE1 PYDC1 SMCO4 UHRF1 ALCAM HELLS	2.74e-05	199	131	6	e1190b1c2d21fed313bb58e24d0e6365de6e6599
ToppCell	Fetal_brain-fetalBrain_Zhong_nature-GW13-Stem_cells-Stem_cells\|GW13 / Sample Type, Dataset, Time_group, and Cell type.	FAM184B NCAPD3 PA2G4 UHRF1 NUP153 HELLS	2.74e-05	199	131	6	91882af9dc7265c9b419f4415cbcf656087a2ab3
ToppCell	(01)_IL1RL1+-(2)_GFP_FOXI1\|(01)_IL1RL1+ / shred by cell type by condition	ATRX ARID4A RFC1 THOC2 USP16 ANKRD12	2.74e-05	199	131	6	a2f7d0cabf35b80fe239fae34a77bf9344d5d743
ToppCell	LPS_IL1RA_TNF-Endothelial-Endothelial-FOXM1\|LPS_IL1RA_TNF / Treatment groups by lineage, cell group, cell type	NCAPD3 GTSE1 CKAP5 HP1BP3 UHRF1 HELLS	2.82e-05	200	131	6	4cfe08878a6981bf7b3567f9e82192d8f060ddde
ToppCell	356C-Myeloid-Dendritic-cDC_proliferating_1\|Dendritic / Donor, Lineage, Cell class and subclass (all cells)	GTSE1 CKAP5 PA2G4 UHRF1 DNMT1 HELLS	2.82e-05	200	131	6	548a0f486ab8745da107f2815914dbf873a6e3c8
ToppCell	myeloid-pro-cDC\|myeloid / Lineage and Cell class	GTSE1 IDH2 PA2G4 UHRF1 DNMT1 HELLS	2.82e-05	200	131	6	4aa2308eeb94e0bdff4e02eb9e45ba8837ae14bf
ToppCell	mild\|World / Cohort 1 (10x PBMC) with disease condition, cell group and cell class	SETX ATRX CHD2 NCL AHNAK ANKRD12	2.82e-05	200	131	6	12f1685ce8f218433068e090c9d839cd5a1910bf
ToppCell	COVID-19-COVID-19_Mild-Lymphocyte-T/NK-NK_activated\|COVID-19_Mild / Disease, condition lineage and cell class	SETX ARHGEF12 HUWE1 EIF3CL AHNAK EIF3C	2.82e-05	200	131	6	2281debd86e5d92e8fe0397aec9ef670800f7471
ToppCell	COVID-19-Myeloid-MoAM2,_CCL18\|Myeloid / Condition, Lineage and Cell class	FNIP2 AHNAK SDC3 ZFHX3 ANKRD12 ALCAM	2.82e-05	200	131	6	a60346c5ea7a3dae1ad3c5dc6c6eca65b64c6888
ToppCell	Control-B_intermediate-1\|World / disease group and sub_cluster of B and Plasma cells(res = 0.5)	SETX PPP4R3A CCDC7 AHNAK EIF3C	6.74e-05	144	131	5	984470ff6ddce4c743e2db78fa98dae055aaa273
ToppCell	E16.5-samps\|World / Age Group, Lineage, Cell class and subclass	IDH2 ADARB2 UHRF1 DNMT1 HELLS	7.92e-05	149	131	5	e94d075f68c1c70c89fab50b1b765b5dda650d09
ToppCell	RV-16._Neuronal\|World / Chamber and Cluster_Paper	GRIK2 DNAJC6 TULP1 AHNAK ALCAM	7.92e-05	149	131	5	3a2f8c4173dcf9e3f8d3b8ffddbc597098adf7a9
ToppCell	Globus_pallidus-Macroglia-POLYDENDROCYTE-P3-Tnr-Polydendrocyte.Tnr.Cyth3_(Cyth3)-\|Globus_pallidus / BrainAtlas - Mouse McCarroll V32	TRPM7 HP1BP3 CCNT1 SLC4A1AP SPEN	8.98e-05	153	131	5	553dff9688a1996d8f4ba16e60c683593d781389
ToppCell	PND28-Immune-Immune_Lymphocytic_T/NK-Lymphocytic_T-CD4_T-CD4_T_prolif\|PND28 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif	ARPP21 ATRX CHD3 KDM2B HELLS	8.98e-05	153	131	5	5ac4b97d35c1029a5fc625239f92e35136c4d832
ToppCell	Globus_pallidus-Macroglia-POLYDENDROCYTE-P3-Tnr-Polydendrocyte.Tnr.Cyth3_(Cyth3)\|Globus_pallidus / BrainAtlas - Mouse McCarroll V32	TRPM7 HP1BP3 CCNT1 SLC4A1AP SPEN	8.98e-05	153	131	5	88ca2d2c2ab19fbee13e18951b993ee05dd30f67
ToppCell	severe_COVID-19-cDC\|World / disease group, cell group and cell class (v2)	FNIP2 POLR1G ALDH1L2 SMO ST18	9.84e-05	156	131	5	0a7e18ed8e13261c405eb6b9a183e99d8e1aac37
ToppCell	Healthy/Control-RBC\|Healthy/Control / Disease group and Cell class	ARHGEF12 SHOX2 ADARB2 C3 CFAP157	1.04e-04	158	131	5	1fec4f9affdbfba2e281183b717d4d357d474400
ToppCell	Healthy/Control-RBC\|World / Disease group and Cell class	ARHGEF12 SHOX2 ADARB2 C3 CFAP157	1.11e-04	160	131	5	f10871238e7bdf3e1f65a17070000477196e50fe
ToppCell	PBMC_fresh-frozen-Mild-Moderate_progression_d02_child-Lymphocytic-Lymphocytic_T-mature_alpha-beta_T_cell-T_CD4_c01-LEF1\|Mild-Moderate_progression_d02_child / Compartment, severity and other cell annotations on 10x 3' data (130k)	HAUS6 CCDC7 PA2G4 DDX18	1.21e-04	86	131	4	79c4326df78f0a5b3ef13b2fb4e5074934536e35
ToppCell	COVID-19_Mild-Classical_Monocyte-cMono_1\|COVID-19_Mild / Disease condition and Cell class	DAB1 PPP4R3A EIF3CL SVBP EIF3C	1.28e-04	165	131	5	ef709c5d3231c65d351316e1e31b9c9eba721628
ToppCell	LA-16._Neuronal\|LA / Chamber and Cluster_Paper	GRIK2 DNAJC6 AHNAK ALCAM RPGR	1.39e-04	168	131	5	c55bbfbde8bb954f1cb9af82007bdd1f8070fee3
ToppCell	COVID-19_Mild-Classical_Monocyte-cMono_1\|Classical_Monocyte / Disease condition and Cell class	DAB1 PPP4R3A EIF3CL SVBP EIF3C	1.39e-04	168	131	5	d50078614f7af74dc2aa4081c1708a5156ac51cf
ToppCell	LPS-IL1RA+antiTNF-Endothelial-Endothelial-FOXM1\|LPS-IL1RA+antiTNF / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2	NCAPD3 GTSE1 CKAP5 UHRF1 HELLS	1.43e-04	169	131	5	e0607af8ae8609d43e26ff2a2cab92650bfcd5b7
ToppCell	LV-16._Neuronal\|LV / Chamber and Cluster_Paper	PCBP3 GRIK2 DNAJC6 ALCAM RPGR	1.43e-04	169	131	5	a8fc8ab0f0757e939e213efb61c03cfe390bf7d2
ToppCell	facs-Trachea-3m-Mesenchymal-myofibroblast-tracheobronchial_smooth_muscle_cell-smooth_muscle_cell_of_trachea_l6-17\|3m / method, tissue, age, lineage, sublineage, cell ontologies, cell type and subtype	DAB1 GPR179 AKAP4 CLVS2 ST18	1.47e-04	170	131	5	941d637cf76918ee4b0a1833abd1a42593cb8b1a
ToppCell	PND03-Mesenchymal-Mesenchymal_structural-Fibroblastic-AF1-AF1_prolif\|PND03 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif	IDH2 PPP4R4 KIAA1549L UHRF1 HELLS	1.47e-04	170	131	5	e20568c8f3f17d94de78229617eb2f7e4c5af2bc
ToppCell	10x5'-bone_marrow-Lymphocytic_NK-Cycling_NK\|bone_marrow / Manually curated celltypes from each tissue	NCAPD3 GTSE1 UHRF1 DNMT1 HELLS	1.60e-04	173	131	5	8a9dd85f718564c07cf3120ad648daeb60c94fc5
ToppCell	11.5-Distal-Mesenchymal-Mesenchyme_SERPINF1-high\|Distal / Age, Tissue, Lineage and Cell class	PCBP3 BNC1 TNNI3K C3 ALCAM	1.60e-04	173	131	5	6989c9cebcd81eccceac7e5a86152676ee959386
ToppCell	PND03-Immune-Immune_Myeloid-Monocytic-Macrophage-AM-AM_prolif\|PND03 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif	NCL UHRF1 SDC3 DNMT1 HELLS	1.73e-04	176	131	5	270d7908dbd84028958d257f94941dc685e20255
ToppCell	10x5'v1-week_17-19-Myeloid_macrophage-stroma-erythroid_macrophage\|week_17-19 / cell types per 3 fetal stages;per 3',per 5'	FAM184B ARHGEF12 TRDN SDC3 SMO	1.78e-04	177	131	5	b647667da62a91dbe3890820142626e26aa779d2
ToppCell	E18.5-Mesenchymal-Mesenchymal_myocytic-Myofibroblast_vascular-VSMC-VSMC_prolif\|E18.5 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif	GPR179 TULP1 UHRF1 LMOD1 ZFHX3	1.78e-04	177	131	5	4553ee8cd9c24db6511b09fe49ed11a89e7cde9e
ToppCell	3'_v3-Lung-Myeloid_Monocytic-Cycling_mono\|Lung / Manually curated celltypes from each tissue	GTSE1 IDH2 SERPINB10 UHRF1 HELLS	1.82e-04	178	131	5	67aa17b17da3121c199af45e747c23e2626a9bb2
ToppCell	droplet-Marrow-nan-3m-Hematologic-nan\|Marrow / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation	SETX ATRX CHD3 HP1BP3 PNRC1	2.02e-04	182	131	5	e78ba2c5cae480c16a596ce7c3bf2d480becacf4
ToppCell	droplet-Marrow-nan-3m-Hematologic\|Marrow / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation	SETX ATRX CHD3 HP1BP3 PNRC1	2.02e-04	182	131	5	1710eab3037a87609d21838be2d2d29c3bc36651
ToppCell	PND10-Immune-Immune_Lymphocytic_T/NK-Lymphocytic_B-B-B_prolif\|PND10 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif	NCL PA2G4 UHRF1 DNMT1 HELLS	2.07e-04	183	131	5	956ff95aef9c5521b6a3ba7ac6df0aad242c1c35
ToppCell	droplet-Marrow-nan-3m-Myeloid-Cd4_positive_Macrophages\|Marrow / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation	IDH2 DDX18 KDM2B SMO HELLS	2.07e-04	183	131	5	92ef926e6c1de8477fa4f35d1dae85482d8009de
ToppCell	droplet-Marrow-nan-3m-Myeloid-macrophage\|Marrow / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation	IDH2 DDX18 KDM2B SMO HELLS	2.07e-04	183	131	5	24db9cc717e651586317c6a8e03a3401651273c1
ToppCell	COVID-19_Mild-NK_activated\|COVID-19_Mild / Disease condition and Cell class	SRPRA PPP4R3A EIF3CL AHNAK EIF3C	2.07e-04	183	131	5	22bd05135906d0ecc4ba8c2e0a666093d1bf3b8f
ToppCell	droplet-Large_Intestine-COLON_PROXIMAL-30m-Epithelial-Lgr5+_undifferentiated_cell\|Large_Intestine / Large_Intestine_Pancreas_Liver - method, tissue, subtissue, age, lineage, cell ontology and free annotation	NCL POLR1G RUVBL1 DDX18 HELLS	2.13e-04	184	131	5	e7b9c69fc77040c5191ad8089697051e2589c30e
ToppCell	facs-Limb_Muscle-ForelimbandHindlimb\|Limb_Muscle / Tongue_Heart_Limb_Muscle_Aorta_Diaphragm - method, tissue, subtissue, age, lineage, cell ontology and free annotation	MAP4 HUWE1 CCNT1 PNRC1 SPTY2D1	2.18e-04	185	131	5	eb7d3c1363d5fedc611f9c1a91ea823de251355e
ToppCell	facs-Trachea-18m-Mesenchymal-fibroblast-fibroblast_of_trachea-\|18m / method, tissue, age, lineage, sublineage, cell ontologies, cell type and subtype	MYH4 GRIK2 AKAP4 CCDC87 ST18	2.23e-04	186	131	5	bdc87e4631a8ea73e262e541aa84a28f24c94b00
ToppCell	renal_cortex_nuclei-Renal_AKI_(acute_kidney_injury)-Epithelial-Collecting_tubule_epithelial_cell-kidney_connecting_tubule_epithelial_cell_cycling\|Renal_AKI_(acute_kidney_injury) / Celltypes from Cells and Nuclei per compartment and clinical group	NCAPD3 GTSE1 GRIK2 UHRF1 HELLS	2.29e-04	187	131	5	057569c9437219ecc396aa6e673b1178a2273837
ToppCell	droplet-Marrow-nan-3m-Hematologic-megakaryocyte-erythroid_progenitor_cell\|Marrow / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation	RFC1 C3 ANKRD12 DNMT1 HELLS	2.29e-04	187	131	5	14c239af77116d28d511dea754b6150d20488080
ToppCell	10x5'-GI_small-bowel-Lymphocytic_T_CD4-T_CD4/CD8\|GI_small-bowel / Manually curated celltypes from each tissue	TRPM7 CHD2 HUWE1 ANKRD12 SPEN	2.35e-04	188	131	5	ab9b725d6e0cdab8e9ddda6dee09e14730e9a578
ToppCell	3'-Broncho-tracheal-Immune_Lymphocytic-Lymphocytic_T/NK-natural_killer_cell-NK_cells-NK_cells_L.1.3.2.0\|3' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5	GTSE1 CKAP5 CCDC168 UHRF1 HELLS	2.35e-04	188	131	5	319fbeca200ab998daf49fcaee0bfdb57bf7ee4b
ToppCell	droplet-Tongue-nan\|Tongue / Tongue_Heart_Limb_Muscle_Aorta_Diaphragm - method, tissue, subtissue, age, lineage, cell ontology and free annotation	ATRX CHD2 NEMF AEBP2 SLTM	2.35e-04	188	131	5	d62cc37e86b7b186e53aeb7f421c4e5ee28f23bd
ToppCell	droplet-Kidney-nan-18m-Epithelial-kidney_mesangial_cell\|Kidney / Skin_Bladder_Kidney_Mammary_Gland - method, tissue, subtissue, age, lineage, cell ontology and free annotation	MAP1A SYNM GRIK2 LMOD1 ZFHX3	2.35e-04	188	131	5	d1a4cd4db95d8d32b79156290f7867f32824cc87
ToppCell	MatrixFB-Fibroblast-E_(Early_Fibroblastic_progenitor)\|MatrixFB / shred on cell class and cell subclass (v4)	NCAPD3 GTSE1 UHRF1 DNMT1 HELLS	2.35e-04	188	131	5	b240ea20750ffb825cb5fe41d06c632233406ab6
ToppCell	PCW_07-8.5-Mesenchymal-Mesenchymal_myocytic-mes_immature_ASM2_(12)\|PCW_07-8.5 / Celltypes from embryonic and fetal-stage human lung	DAB1 ADARB2 SDC3 LMOD1 ZFHX3	2.35e-04	188	131	5	3004e961d214919e08c7cd5f10c3de5cf85b35a3
ToppCell	Control-Endothelial-Endothelial-FOXM1\|Control / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2	NCAPD3 GTSE1 CKAP5 UHRF1 HELLS	2.41e-04	189	131	5	1e1499b062d9c647c8f38b0c4e0d871d159be5dd
ToppCell	HSPCs-Gran/Mono_prog.\|World / Lineage and Cell class	IDH2 LYAR PA2G4 RPF2 HELLS	2.47e-04	190	131	5	94547c1cc2c3f2ac28a6d07317e50e1e3fd20267
ToppCell	droplet-Spleen-nan-18m-Lymphocytic-immature_NKT_cell\|Spleen / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation	GTSE1 CKAP5 UHRF1 DNMT1 HELLS	2.47e-04	190	131	5	b99271d139c8d01e20feb95d99f79c9b2756b4cb
ToppCell	Brain_organoid-organoid_Paulsen_bioRxiv-3.5_mon-Neuronal-Immature_INs\|3.5_mon / Sample Type, Dataset, Time_group, and Cell type.	ADARB2 CLVS2 PNRC1 ZFHX3 ST18	2.47e-04	190	131	5	842760bfe0a52e67bad800efa7d99448a4a23ebb
ToppCell	3'_v3-bone_marrow-Lymphocytic_T_CD4/8-lo-Cycling_T\|bone_marrow / Manually curated celltypes from each tissue	NCAPD3 GTSE1 CKAP5 UHRF1 HELLS	2.53e-04	191	131	5	210a0f1a71df2508cbfc73d6868a2122338b9a1c
ToppCell	3'-GW_trimst-2-LargeIntestine-Mesenchymal-immature_mesenchymal_cell-cycling_stromal\|GW_trimst-2 / Celltypes from developing, pediatric, Crohn's, & adult GI tract	GTSE1 KIAA1549L UHRF1 DNMT1 HELLS	2.53e-04	191	131	5	50854384fdaa0efa2e3227659d544ed09ac102f2
ToppCell	tumor_Lymph_Node_/_Brain-T/NK_cells-Undetermined\|tumor_Lymph_Node_/_Brain / Location, Cell class and cell subclass	GTSE1 IDH2 ARPC2 UHRF1 HELLS	2.59e-04	192	131	5	3856c4d611224cd6c2558631147cd5333bc0ccb7
ToppCell	facs-Thymus-Flowthrough-3m-Lymphocytic-proliferating_thymocyte;_DN_to_DP_transition,_dividing_(some_are_Cd8+/_Cd4+,_some_undergoing_VDJ_recombination)\|Thymus / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation	NCAPD3 GTSE1 UHRF1 DNMT1 HELLS	2.59e-04	192	131	5	e8d47504b744040a762ec9b670a66cc060b2ae86
Disease	syndromic X-linked intellectual disability Claes-Jensen type (implicated_via_orthology)	KDM5B KDM5C	1.10e-04	4	127	2	DOID:0060809 (implicated_via_orthology)
Disease	retinitis pigmentosa (is_implicated_in)	TULP1 WDR19 RPGR	7.37e-04	41	127	3	DOID:10584 (is_implicated_in)
Disease	serum metabolite measurement	RGSL1 CKAP5 GRIK2 PACRGL ALDH1L2 AEBP2 ZFHX3 ACAA2 ALCAM UTP3 DNMT1 CFAP157	8.02e-04	945	127	12	EFO_0005653
Disease	Drug habituation	FAM184B GRIK2 ADARB2 MPP7	1.57e-03	115	127	4	C0013170
Disease	Drug abuse	FAM184B GRIK2 ADARB2 MPP7	1.57e-03	115	127	4	C0013146
Disease	Prescription Drug Abuse	FAM184B GRIK2 ADARB2 MPP7	1.57e-03	115	127	4	C4316881
Disease	Substance-Related Disorders	FAM184B GRIK2 ADARB2 MPP7	1.57e-03	115	127	4	C0236969
Disease	Drug Use Disorders	FAM184B GRIK2 ADARB2 MPP7	1.57e-03	115	127	4	C0013222
Disease	Drug Dependence	FAM184B GRIK2 ADARB2 MPP7	1.57e-03	115	127	4	C1510472
Disease	Substance Dependence	FAM184B GRIK2 ADARB2 MPP7	1.57e-03	115	127	4	C0038580
Disease	Substance Use Disorders	FAM184B GRIK2 ADARB2 MPP7	1.57e-03	115	127	4	C0038586
Disease	Organic Mental Disorders, Substance-Induced	FAM184B GRIK2 ADARB2 MPP7	1.57e-03	115	127	4	C0029231
Disease	Substance abuse problem	FAM184B GRIK2 ADARB2 MPP7	1.62e-03	116	127	4	C0740858
Disease	hepatoblastoma (is_marker_for)	ZFHX3 SMO	1.86e-03	15	127	2	DOID:687 (is_marker_for)
Disease	syndromic intellectual disability (implicated_via_orthology)	KDM5B KDM5C	2.12e-03	16	127	2	DOID:0050888 (implicated_via_orthology)
Disease	response to acetylsalicylate	MAP4 DAB1	2.12e-03	16	127	2	GO_1903492
Disease	C-reactive protein measurement	ARPP21 MAP1A NCL CCDC168 THOC2 DNAJC6 EIF3CL ZNF608 SLC4A1AP AHNAK KDM2B EIF3C SF3B2	2.13e-03	1206	127	13	EFO_0004458
Disease	apolipoprotein B measurement	SRPRA PPP4R4 SARS1 SLC4A1AP DDX18 NPC1L1 ZFHX3 SPTY2D1 CCDC93	2.34e-03	663	127	9	EFO_0004615
Disease	ocular hypertension (biomarker_via_orthology)	C3 SMO	2.40e-03	17	127	2	DOID:9282 (biomarker_via_orthology)
Disease	Familial Progressive Myoclonic Epilepsy	CHD2 AFG3L2	2.40e-03	17	127	2	C0751777
Disease	Atypical Inclusion-Body Disease	CHD2 AFG3L2	2.40e-03	17	127	2	C0751776
Disease	Myoclonic Epilepsies, Progressive	CHD2 AFG3L2	2.40e-03	17	127	2	C0751778
Disease	Biotin-Responsive Encephalopathy	CHD2 AFG3L2	2.40e-03	17	127	2	C0751780
Disease	May-White Syndrome	CHD2 AFG3L2	2.40e-03	17	127	2	C0751782
Disease	Dentatorubral-Pallidoluysian Atrophy	CHD2 AFG3L2	2.40e-03	17	127	2	C0751781
Disease	Action Myoclonus-Renal Failure Syndrome	CHD2 AFG3L2	2.69e-03	18	127	2	C0751779
Disease	pulse pressure measurement	HAUS6 PCBP3 TRPM7 CKAP5 ARHGEF12 CHD2 PRDM11 FAM193A KIAA1549L UHRF1 ZFHX3 IK ST18 DNMT1	2.72e-03	1392	127	14	EFO_0005763
Disease	severe acute respiratory syndrome, COVID-19	DAB1 ADARB2 ARPC2 PDILT AEBP2 ZFHX3 ALCAM	3.29e-03	447	127	7	EFO_0000694, MONDO_0100096
Disease	response to ketamine	DAB1 PACRGL ZFHX3	3.32e-03	69	127	3	EFO_0009748
Disease	renal system measurement	GRIK2 PDILT	3.32e-03	20	127	2	EFO_0004742
Disease	cognitive function measurement	PCBP3 ARPP21 MAP4 MAGEB18 CDKL3 OTOL1 CHD2 SMCO4 WDR19 TNNI3K FAM193A ZNF608 RBM6 CCDC93	3.54e-03	1434	127	14	EFO_0008354
Disease	intellectual disability (implicated_via_orthology)	KDM5B ATRX KDM5C	4.20e-03	75	127	3	DOID:1059 (implicated_via_orthology)
Disease	age at menarche	CHD2 POLR1G DNAJC6 ADARB2 TNNI3K PDILT RBM6 ST18	4.26e-03	594	127	8	EFO_0004703
Disease	Colonic Neoplasms	KDM5B GRIK2 RFC1 DNMT1	4.28e-03	152	127	4	C0009375

Protein segments in the cluster

Peptide	Gene	Start	Entry
KKKGLMGPLTELDTK	TADA3	221	O75528
KAKEESPSKAGMNKR	AEBP2	366	Q6ZN18
MEKTEEVKKEAEKSP	ARID4A	776	P29374
FMKSPRKIKKVGTTE	CTNNBL1	386	Q8WYA6
DKGKSEDSEKKMSPE	CCDC7	351	Q96M83
KTTPKEPTEKKMARA	DNMT1	326	P26358
ASEPKEVMGEKKESK	AFG3L2	86	Q9Y4W6
ERDKGKMKSDPCKSL	AKAP4	476	Q5JQC9
RPSKDKEKEKTQMIT	CCAR1	906	Q8IX12
TRVVEEIKKMKIGDP	ALDH1L2	746	Q3SY69
EIKKMKIGDPLDRST	ALDH1L2	751	Q3SY69
MLKRESKKTESSKIP	CDKL3	546	Q8IVW4
RPDAEKKEMKTITGK	ARPC2	281	O15144
KSRKSSMPIKIEKEA	BNC1	536	Q01954
TEKRMDKVGKYPKEL	C3	676	P01024
VEGLDIKAKAPKVKM	AHNAK	5131	Q09666
KAASSKPEEIKMRIK	CCNT1	471	O60563
MVEKPYGRKSKDKIA	ANKRD12	21	Q6UB98
PKIERSDVSKEMKEK	ANKRD12	41	Q6UB98
KGRPYLDKMKSDKVE	CCDC87	801	Q9NVE4
AKKMPKKIGKTREEL	DHX16	1026	O60231
GFEPKKEEIKKMISE	CETN2	61	P41208
MAPKKSVSKAGKELE	CFAP157	1	Q5JU67
KKKERPSKDCPKLDM	FAM193A	936	P78312
KDKTSEKPKIRMLSK	ARPP21	121	Q9UBL0
SMKKDKEGEEKGKRR	ARHGEF12	581	Q9NZN5
ARKEVKLPGKGKSTM	HP1BP3	531	Q5SSJ5
GPTKKKAKMRAAELA	ADARB2	171	Q9NS39
DPISKFMERKKLKES	PPP4R3A	711	Q6IN85
KEKEMKKGIAFPTSI	PA2G4	66	Q9UQ80
PARVGKKGKKEVMAE	OGFOD1	11	Q8N543
IDASEEKPVMRKKRG	HELLS	116	Q9NRZ9
PVRNEKGEISMEKVK	MFAP1	21	P55081
QEDKTRKPKMLEEKS	MAP1A	1586	P78559
KYETKEPITKGDMIK	MAGEB18	121	Q96M61
AIKTEGKPAEVKKMT	MAP4	836	P27816
RREMKKKKLPSDSGD	NEMF	821	O60524
SQKDKEKMPGKSEIE	GPR179	1616	Q6PRD1
GYLTPSMKKKKVEDV	FAM184B	956	Q9ULE4
SMKKKKVEDVPSRVV	FAM184B	961	Q9ULE4
LKRVMKEKTKPQGGE	CCDC28A	141	Q8IWP9
PLRKEVLKSKMGKSE	PNRC1	176	Q12796
TDMKKEDEKVKRGTG	LMOD1	246	P29536
KEETPSKEGKMFIKA	MPP7	221	Q5T2T1
KEMKSSIKQEPIERK	KDM5B	271	Q9UGL1
SKGLTERKKMYEKAP	KIAA1549L	1426	Q6ZVL6
KHTLEEKRKMTKDGP	PTPDC1	736	A2A3K4
ETMGSRKVKKSKQKP	DDX18	46	Q9NVP1
MKVDRTKLKKTPTEA	HUWE1	1	Q7Z6Z7
KEKEMKKSPTSLKRE	GTSE1	131	Q9NYZ3
GFSMDRKVEKKKEPS	HDGFL2	456	Q7Z4V5
METTPAKGKKAAKVV	NCL	211	P19338
IGKKGETVKKMREES	PCBP3	61	P57721
VMATVKKGKPELRKK	RPL23	61	P62829
RDKSKMVDPKKGTSL	NPC1L1	311	Q9UHC9
VMSQKDGDRPKKKVT	OPN3	351	Q9H1Y3
VKEKPKMFAKGTEIT	EIF3C	311	Q99613
LVKEKPKMFAKGTEI	EIF3CL	311	B5ME19
KMEKAEDKKTALPAG	CCDC93	216	Q567U6
GKKMPSKTSLKEDED	CKAP5	1141	Q14008
EKKKKRDTPMLPKDT	ATRX	2221	P46100
TRMKKDDSTKARPQK	GABRR3	46	A8MPY1
DKRIKVAKPVVEMDG	IDH2	41	P48735
TEGAEGPEEKKKVKM	KDM2B	921	Q8NHM5
TDKPRQKMGKETFKD	DAB1	436	O75553
KKRRKMSKGLPDKSE	CACNA1S	681	Q13698
GEVKDDGLEKSPMKK	CHD2	1376	O14647
EKPEKNSRIGEKMET	CHD3	1581	Q12873
KKMEERVKACGPSLE	FNIP2	736	Q9P278
MKEKLTKGDDDSSKP	GPALPP1	171	Q8IXQ4
DKKGPRTIAEMRKEE	DNAJC6	796	O75061
SEVETDSKKKKMKLP	LYAR	276	Q9NX58
KDTKMGTPKEKNEAI	HAUS6	481	Q7Z4H7
TEVKMEKDKPKDRTC	CCDC168	2866	Q8NDH2
ADTKDAKPLLKEMKR	GRIK2	206	Q13002
MKKKDEGSYTLEEPK	SDC3	411	O75056
SVKEKLKMLRKESPE	UTP3	211	Q9NQZ2
IVEGKPQIKMTKKTD	ALCAM	411	Q13740
KASTKKVVMKFDPGI	CFAP47	521	Q6ZTR5
LKPLERKDKMGGKRT	CCDC103	56	Q8IW40
FTKKSEEREMPKGLK	OTOL1	31	A6NHN0
KRLMDKKFKEPITSA	PACRGL	206	Q8N7B6
SMEKKKGEPRTRAEA	IYD	26	Q6PHW0
PVGKETPSKRMKRDK	ORC2	221	Q13416
MTKYVSKLEEPAGKK	PDILT	541	Q8N807
KDLREREKSTKKMSP	RPGR	656	Q92834
SKTIGEKMKKKEPVG	SARS1	61	P49591
EKMKKKEPVGDDESV	SARS1	66	P49591
EMSKRDGKEKKDRGV	RBM6	846	P78332
PKIDFKMEIIKETKT	RGSL1	606	A5PLK6
MDPPARKEKTKVKES	SVBP	1	Q8N300
DKMFEKKRRDTKTPT	PPP4R4	726	Q6NUP7
IRTKPEEKMFDSKEK	SYNM	516	O15061
MLDEEPKTKKARKDT	RFC1	231	P35251
SAMEVEPKKLKGKRD	PRDM11	81	Q9NQV5
TPEELKKFKMKLGTV	PYDC1	16	Q8WXC3
MRQLKGKPKKETSKD	SMCO4	1	Q9NRQ5
SVEKVKGDPSKKEMK	SLTM	456	Q9NWH9
PTKKRKRQKGTEGME	POLR1G	286	O15446
EVKKPKRKRSEKPMA	SETX	1156	Q7Z333
VSPELKDRKEDAKGM	SHOX2	116	O60902
VTGEKKKEEPASGKM	MYH4	201	Q9Y623
KKKIEGMVRRPDISE	WDR19	1231	Q8NEZ3
IKVVKKSEERPMTAE	SPTY2D1	186	Q68D10
MKGLKKRPAERITED	RPF2	281	Q9H7B2
MISVEKAKNEPVGKK	SAFB	476	Q15424
RKGGVKMTPTKEEKE	ST18	796	O60284
MEKRELKASVPKFDK	C1orf105	1	O95561
SKEIKLLAMRSKPDK	NCAPD3	1151	P42695
KEVEKELSPKSMKRS	CLVS2	286	Q5SYC1
DEMAPIEVKTKKGKQ	ACAA2	201	P42765
APAGEGTKMRKTKKK	TULP1	186	O00294
AGMETPELIELRKKK	SF3B2	756	Q13435
PLSKSKEREMDKKDL	THOC2	1446	Q8NI27
MGKKRTKGKTVPIDD	USP16	1	Q9Y5T5
KLESVRMKVPKEKGL	SPEN	931	Q96T58
KKKKIRTDSEGKMDD	SPEN	1496	Q96T58
VPLKKFKSIRETMKE	PGC	21	P20142
MTGRKEETKSEPKEA	SMTNL1	111	A8MU46
SMIETRGEKPKEKAK	SRPRA	151	P08240
KRKKMEADGVEVKRP	IK	541	Q13123
MSSFKEEKDIKPIIK	SAFB2	381	Q14151
KTSEAKKEEMPATKG	NUP153	1066	P49790
SDDEPKRIKKSKMIA	SMO	556	Q99835
GQLMKPKKTEITDKL	RUVBL1	261	Q9Y265
TKEGKDRIKKLGLTM	UHRF1	591	Q96T88
EPETKKDEKMSKAGK	TRDN	491	Q13061
DKEGKETGSPKMDAK	ZNF608	821	Q9ULD9
KKNKITMIAEPLEKG	EFTUD2	681	Q15029
PLGKIKSMTKEKADI	TNNI3K	431	Q59H18
KKTKERDSKQMSTEP	WDR87	1101	Q6ZQQ6
VTMGKEISKKEEKKT	WDR87	1381	Q6ZQQ6
VKCDPESEKKRKMEF	SERPINB10	66	P48595
IDTVMEEGKKKRTKD	TRPM7	591	Q96QT4
MLREEATKKSKEKEP	ZNF816	1	Q0VGE8
KEMADKSGLPQKVIK	ZFHX3	2176	Q15911
MAKDKTLRKKDKEGP	KDM5C	251	P41229
MKKAGKIDEKPETFE	SLC4A1AP	486	Q9BWU0