Cluster composition

Functions

CategoryNameIntersectionWithQueryPValueGenesInTermGenesInQueryGenesInTermInQueryID
GeneOntologyMolecularFunctioncytidine deaminase activity

APOBEC3D AICDA APOBEC3B

1.25e-0513723GO:0004126
GeneOntologyMolecularFunctioninositol 1,3,4,5 tetrakisphosphate binding

ADAP1 ADAP2

1.27e-045722GO:0043533
GeneOntologyMolecularFunctionubiquitin-like ligase-substrate adaptor activity

PRAMEF14 PRAMEF1 SKP2 PRAMEF13

2.20e-0482724GO:1990756
GeneOntologyMolecularFunctiondeaminase activity

APOBEC3D AICDA APOBEC3B

2.48e-0434723GO:0019239
GeneOntologyMolecularFunctionhydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines

APOBEC3D AICDA APOBEC3B

2.95e-0436723GO:0016814
GeneOntologyMolecularFunctionenzyme-substrate adaptor activity

PRAMEF14 PRAMEF1 SKP2 PRAMEF13

3.86e-0495724GO:0140767
GeneOntologyMolecularFunctionnuclear receptor binding

BAZ2A PRAMEF14 PRAMEF1 PRAMEF13 PADI2

5.75e-04187725GO:0016922
GeneOntologyMolecularFunctionmodification-dependent protein binding

ABRAXAS2 BAZ2A AGL CXXC1 CBX2

8.89e-04206725GO:0140030
GeneOntologyMolecularFunctionnuclear retinoic acid receptor binding

PRAMEF14 PRAMEF1 PRAMEF13

1.03e-0355723GO:0042974
GeneOntologyBiologicalProcessnegative regulation of viral genome replication

APOBEC3D RSAD2 AICDA OAS2 APOBEC3B

1.21e-0656695GO:0045071
GeneOntologyBiologicalProcessDNA cytosine deamination

APOBEC3D AICDA APOBEC3B

4.23e-0610693GO:0070383
GeneOntologyBiologicalProcesscytidine to uridine editing

APOBEC3D AICDA APOBEC3B

7.71e-0612693GO:0016554
GeneOntologyBiologicalProcesscytidine metabolic process

APOBEC3D AICDA APOBEC3B

1.27e-0514693GO:0046087
GeneOntologyBiologicalProcesscytidine catabolic process

APOBEC3D AICDA APOBEC3B

1.27e-0514693GO:0006216
GeneOntologyBiologicalProcesscytidine deamination

APOBEC3D AICDA APOBEC3B

1.27e-0514693GO:0009972
GeneOntologyBiologicalProcessDNA deamination

APOBEC3D AICDA APOBEC3B

1.27e-0514693GO:0045006
GeneOntologyBiologicalProcessregulation of viral genome replication

APOBEC3D RSAD2 AICDA OAS2 APOBEC3B

1.35e-0591695GO:0045069
GeneOntologyBiologicalProcessnegative regulation of single stranded viral RNA replication via double stranded DNA intermediate

APOBEC3D AICDA APOBEC3B

1.94e-0516693GO:0045869
GeneOntologyBiologicalProcesspyrimidine ribonucleoside metabolic process

APOBEC3D AICDA APOBEC3B

1.94e-0516693GO:0046131
GeneOntologyBiologicalProcesspyrimidine ribonucleoside catabolic process

APOBEC3D AICDA APOBEC3B

1.94e-0516693GO:0046133
GeneOntologyBiologicalProcessnegative regulation of viral process

APOBEC3D RSAD2 AICDA OAS2 APOBEC3B

2.46e-05103695GO:0048525
GeneOntologyBiologicalProcesspyrimidine nucleoside catabolic process

APOBEC3D AICDA APOBEC3B

2.82e-0518693GO:0046135
GeneOntologyBiologicalProcessregulation of single stranded viral RNA replication via double stranded DNA intermediate

APOBEC3D AICDA APOBEC3B

3.34e-0519693GO:0045091
GeneOntologyBiologicalProcessbase conversion or substitution editing

APOBEC3D AICDA APOBEC3B

3.34e-0519693GO:0016553
GeneOntologyBiologicalProcesssingle stranded viral RNA replication via double stranded DNA intermediate

APOBEC3D AICDA APOBEC3B

3.92e-0520693GO:0039692
GeneOntologyBiologicalProcessribonucleoside catabolic process

APOBEC3D AICDA APOBEC3B

8.82e-0526693GO:0042454
GeneOntologyBiologicalProcessviral genome replication

APOBEC3D RSAD2 AICDA OAS2 APOBEC3B

9.60e-05137695GO:0019079
GeneOntologyBiologicalProcesspyrimidine nucleoside metabolic process

APOBEC3D AICDA APOBEC3B

9.89e-0527693GO:0006213
GeneOntologyBiologicalProcessdefense response to virus

TRAF3 APOBEC3D RSAD2 AICDA OAS2 SKP2 APOBEC3B

1.45e-04342697GO:0051607
GeneOntologyBiologicalProcessDNA modification

APOBEC3D AICDA APOBEC3B

1.51e-0431693GO:0006304
GeneOntologyBiologicalProcessclearance of foreign intracellular DNA

APOBEC3D APOBEC3B

1.64e-046692GO:0044355
GeneOntologyBiologicalProcessclearance of foreign intracellular nucleic acids

APOBEC3D APOBEC3B

1.64e-046692GO:0099046
GeneOntologyBiologicalProcessviral RNA genome replication

APOBEC3D AICDA APOBEC3B

1.66e-0432693GO:0039694
GeneOntologyBiologicalProcessnucleoside catabolic process

APOBEC3D AICDA APOBEC3B

1.66e-0432693GO:0009164
GeneOntologyBiologicalProcessregulation of viral life cycle

APOBEC3D RSAD2 AICDA OAS2 APOBEC3B

1.77e-04156695GO:1903900
GeneOntologyBiologicalProcessnucleobase-containing small molecule catabolic process

APOBEC3D AICDA APOBEC3B

2.57e-0437693GO:0034656
GeneOntologyBiologicalProcessglycosyl compound catabolic process

APOBEC3D AICDA APOBEC3B

3.49e-0441693GO:1901658
GeneOntologyBiologicalProcessregulation of viral process

APOBEC3D RSAD2 AICDA OAS2 APOBEC3B

3.98e-04186695GO:0050792
GeneOntologyBiologicalProcesspyrimidine-containing compound catabolic process

APOBEC3D AICDA APOBEC3B

4.91e-0446693GO:0072529
GeneOntologyBiologicalProcessresponse to virus

TRAF3 APOBEC3D RSAD2 AICDA OAS2 SKP2 APOBEC3B

5.39e-04425697GO:0009615
GeneOntologyBiologicalProcessribonucleoside metabolic process

APOBEC3D AICDA APOBEC3B

5.56e-0448693GO:0009119
GeneOntologyBiologicalProcessinnate immune response

TRIM49 TRAF3 APOBEC3D RSAD2 HLA-B WFDC11 TRIM49C OAS2 SKP2 TRIM49B APOBEC3B

9.42e-0410926911GO:0045087
GeneOntologyBiologicalProcessdefense response to symbiont

TRIM49 TRAF3 APOBEC3D RSAD2 HLA-B AICDA WFDC11 TRIM49C OAS2 SKP2 TRIM49B APOBEC3B

1.06e-0312866912GO:0140546
GeneOntologyCellularComponentubiquitin ligase complex

TRAF3 FBXO8 LMO7 PRAMEF14 PRAMEF1 SKP2 PRAMEF13 CBX2

2.52e-05352718GO:0000151
GeneOntologyCellularComponenttransferase complex

TRAF3 FBXO8 EPOP LMO7 PRAMEF14 PRAMEF1 SKP2 PRAMEF13 CXXC1 METTL14 CBX2

3.80e-049637111GO:1990234
GeneOntologyCellularComponentCul2-RING ubiquitin ligase complex

PRAMEF14 PRAMEF1 PRAMEF13

5.47e-0447713GO:0031462
DomainAPOBEC_N

APOBEC3D AICDA APOBEC3B

9.92e-0612683PF08210
DomainAPOBEC_N

APOBEC3D AICDA APOBEC3B

9.92e-0612683IPR013158
DomainAPOBEC/CMP_deaminase_Zn-bd

APOBEC3D AICDA APOBEC3B

1.63e-0514683IPR016192
DomainCytidine_deaminase-like

APOBEC3D AICDA APOBEC3B

3.03e-0517683IPR016193
DomainCYT_DCMP_DEAMINASES_1

APOBEC3D AICDA APOBEC3B

3.03e-0517683PS00903
DomainCMP_dCMP_Zn-bd

APOBEC3D AICDA APOBEC3B

3.03e-0517683IPR002125
DomainDysFC

FER1L5 TECPR1

7.80e-054682SM00694
DomainDysFN

FER1L5 TECPR1

7.80e-054682SM00693
DomainPeroxin/Ferlin

FER1L5 TECPR1

7.80e-054682IPR006614
DomainAT_hook

BAZ2A ELF3 CBX2

1.27e-0427683SM00384
DomainAT_hook_DNA-bd_motif

BAZ2A ELF3 CBX2

1.27e-0427683IPR017956
DomainArfGap

ADAP1 ASAP3 ADAP2

1.58e-0429683SM00105
DomainArfGap

ADAP1 ASAP3 ADAP2

1.58e-0429683PF01412
DomainARFGAP

ADAP1 ASAP3 ADAP2

1.58e-0429683PS50115
DomainArfGAP

ADAP1 ASAP3 ADAP2

1.58e-0429683IPR001164
DomainPH_DOMAIN

ADAP1 RASGRF1 ASAP3 ADAP2 TECPR1 PHLPP2

5.30e-04279686PS50003
DomainCYT_DCMP_DEAMINASES_2

AICDA APOBEC3B

1.33e-0315682PS51747
DomainZnf_RING/FYVE/PHD

TRIM49 TRAF3 BAZ2A TRIM49C TRIM49B CXXC1 WDR59

1.38e-03459687IPR013083
DomainBBOX

TRIM49 TRIM49C TRIM49B

2.04e-0369683SM00336
DomainButyrophylin

TRIM49 TRIM49C TRIM49B

2.12e-0370683IPR003879
DomainPRAME_family

PRAMEF1 PRAMEF13

2.15e-0319682IPR026271
Domain-

TRIM49 TRIM49C TRIM49B

2.21e-03716834.10.45.10
Domainzf-B_box

TRIM49 TRIM49C TRIM49B

2.30e-0372683PF00643
Domain-

ADAP1 RASGRF1 ASAP3 ADAP2 TECPR1 PHLPP2

2.97e-033916862.30.29.30
DomainZF_BBOX

TRIM49 TRIM49C TRIM49B

3.10e-0380683PS50119
DomainZnf_B-box

TRIM49 TRIM49C TRIM49B

3.22e-0381683IPR000315
DomainPH

ADAP1 RASGRF1 ASAP3 ADAP2 TECPR1

3.42e-03278685SM00233
DomainPH_domain

ADAP1 RASGRF1 ASAP3 ADAP2 TECPR1

3.53e-03280685IPR001849
DomainHR1_rho-bd

ATP6V0A4 VPS53

3.71e-0325682IPR011072
DomainSPRY

TRIM49 TRIM49C TRIM49B

3.93e-0387683SM00449
DomainPH_dom-like

ADAP1 RASGRF1 ASAP3 ADAP2 TECPR1 PHLPP2

4.52e-03426686IPR011993
DomainETS_DOMAIN_1

ERF ELF3

4.64e-0328682PS00345
DomainETS_DOMAIN_2

ERF ELF3

4.64e-0328682PS00346
DomainETS

ERF ELF3

4.64e-0328682SM00413
DomainEts_dom

ERF ELF3

4.64e-0328682IPR000418
DomainETS_DOMAIN_3

ERF ELF3

4.64e-0328682PS50061
DomainEts

ERF ELF3

4.64e-0328682PF00178
DomainSPRY

TRIM49 TRIM49C TRIM49B

4.88e-0394683PF00622
DomainSPRY_dom

TRIM49 TRIM49C TRIM49B

4.88e-0394683IPR003877
DomainB30.2/SPRY

TRIM49 TRIM49C TRIM49B

5.03e-0395683IPR001870
DomainB302_SPRY

TRIM49 TRIM49C TRIM49B

5.03e-0395683PS50188
DomainHMGI/Y_DNA-bd_CS

BAZ2A CBX2

5.67e-0331682IPR000637
Domain-

TRIM49 TRAF3 BAZ2A TRIM49C TRIM49B CXXC1

5.82e-034496863.30.40.10
Domain-

GLB1L3 AGL

7.19e-03356823.20.20.80
Pubmed

Immunoglobulin somatic hypermutation by APOBEC3/Rfv3 during retroviral infection.

APOBEC3D AICDA APOBEC3B

3.40e-08472324821801
Pubmed

Expression and subcellular localisation of AID and APOBEC3 in adenoid and palatine tonsils.

APOBEC3D AICDA APOBEC3B

3.40e-08472329343743
Pubmed

Phosphorylation directly regulates the intrinsic DNA cytidine deaminase activity of activation-induced deaminase and APOBEC3G protein.

APOBEC3D AICDA APOBEC3B

8.48e-08572321659520
Pubmed

Expression profiling in transgenic FVB/N embryonic stem cells overexpressing STAT3.

PRAMEF14 PRAMEF1 SKP2 PRAMEF13

2.44e-072672418500982
Pubmed

Messenger RNA editing in mammals: new members of the APOBEC family seeking roles in the family business.

APOBEC3D AICDA APOBEC3B

1.39e-061172312683974
Pubmed

Trim43a, Trim43b, and Trim43c: Novel mouse genes expressed specifically in mouse preimplantation embryos.

TRIM49 TRIM49C TRIM49B

3.80e-061572319703589
Pubmed

Identification of gene structure and subcellular localization of human centaurin alpha 2, and p42IP4, a family of two highly homologous, Ins 1,3,4,5-P4-/PtdIns 3,4,5-P3-binding, adapter proteins.

ADAP1 ADAP2

4.23e-06272214690521
Pubmed

Identification of centaurin-alpha2: a phosphatidylinositide-binding protein present in fat, heart and skeletal muscle.

ADAP1 ADAP2

4.23e-06272212018390
Pubmed

APOBEC3B and AID have similar nuclear import mechanisms.

AICDA APOBEC3B

4.23e-06272222446380
Pubmed

Lineage-specific biology revealed by a finished genome assembly of the mouse.

TRIM49 TRIM49C FER1L5 TRIM49B

5.32e-065572419468303
Pubmed

The promoter of the oocyte-specific gene, Oog1, functions in both male and female meiotic germ cells in transgenic mice.

PRAMEF14 PRAMEF1 PRAMEF13

6.79e-061872323894331
Pubmed

Oogenesin is a novel mouse protein expressed in oocytes and early cleavage-stage embryos.

PRAMEF14 PRAMEF1 PRAMEF13

6.79e-061872312890732
Pubmed

Oocyte-specific gene Oog1 suppresses the expression of spermatogenesis-specific genes in oocytes.

PRAMEF14 PRAMEF1 PRAMEF13

6.79e-061872329731491
Pubmed

Identification of a new expanding family of genes characterized by atypical LRR domains. Localization of a cluster preferentially expressed in oocyte.

PRAMEF14 PRAMEF1 PRAMEF13

6.79e-061872314675769
Pubmed

Vagal sensory neurons mediate the Bezold-Jarisch reflex and induce syncope.

APOBEC3D PIEZO2 APOBEC3B

6.79e-061872337914931
Pubmed

Identification of a genomic reservoir for new TRIM genes in primate genomes.

TRIM49 TRIM49C TRIM49B

8.05e-061972322144910
Pubmed

Pramel7 mediates ground-state pluripotency through proteasomal-epigenetic combined pathways.

PRAMEF14 PRAMEF1 PRAMEF13

8.05e-061972328604677
Pubmed

Preferentially Expressed Antigen in Melanoma (PRAME) and the PRAME Family of Leucine-Rich Repeat Proteins.

PRAMEF14 PRAMEF1 PRAMEF13

9.46e-062072326694250
Pubmed

Oog1, an oocyte-specific protein, interacts with Ras and Ras-signaling proteins during early embryogenesis.

PRAMEF14 PRAMEF1 PRAMEF13

9.46e-062072316580637
Pubmed

Pramel7 mediates LIF/STAT3-dependent self-renewal in embryonic stem cells.

PRAMEF14 PRAMEF1 PRAMEF13

9.46e-062072321425410
Pubmed

Murine Leukemia Virus P50 Protein Counteracts APOBEC3 by Blocking Its Packaging.

APOBEC3D APOBEC3B

1.27e-05372232641479
Pubmed

APOBEC3 deletion increases the risk of breast cancer: a meta-analysis.

APOBEC3D APOBEC3B

1.27e-05372227602762
Pubmed

A novel role for APOBEC3: susceptibility to sexual transmission of murine acquired immunodeficiency virus (mAIDS) is aggravated in APOBEC3 deficient mice.

APOBEC3D APOBEC3B

1.27e-05372222691411
Pubmed

Studies on the restriction of murine leukemia viruses by mouse APOBEC3.

APOBEC3D APOBEC3B

1.27e-05372222666481
Pubmed

APOBEC3 deletion polymorphism is associated with epithelial ovarian cancer risk among Chinese women.

APOBEC3D APOBEC3B

1.27e-05372224577894
Pubmed

APOBEC3B and APOBEC3F inhibit L1 retrotransposition by a DNA deamination-independent mechanism.

APOBEC3D APOBEC3B

1.27e-05372216648136
Pubmed

Fv1 restriction and retrovirus vaccine immunity in Apobec3-deficient 129P2 mice.

APOBEC3D APOBEC3B

1.27e-05372223533681
Pubmed

Spontaneous recovery from Friend retrovirus-induced leukemia. Mapping of the Rfv-2 gene in the Q/TL region of mouse MHC.

APOBEC3D APOBEC3B

1.27e-0537221541833
Pubmed

In Vivo Examination of Mouse APOBEC3- and Human APOBEC3A- and APOBEC3G-Mediated Restriction of Parvovirus and Herpesvirus Infection in Mouse Models.

APOBEC3D APOBEC3B

1.27e-05372227356895
Pubmed

IFN-α treatment inhibits acute Friend retrovirus replication primarily through the antiviral effector molecule Apobec3.

APOBEC3D APOBEC3B

1.27e-05372223315078
Pubmed

Requirement for Fc effector mechanisms in the APOBEC3/Rfv3-dependent neutralizing antibody response.

APOBEC3D APOBEC3B

1.27e-05372225589647
Pubmed

Murine leukemia virus glycosylated Gag blocks apolipoprotein B editing complex 3 and cytosolic sensor access to the reverse transcription complex.

APOBEC3D APOBEC3B

1.27e-05372223671100
Pubmed

Structural perspectives on HIV-1 Vif and APOBEC3 restriction factor interactions.

APOBEC3D APOBEC3B

1.27e-05372231518043
Pubmed

APOBEC3 signature mutations in chronic lymphocytic leukemia.

APOBEC3D APOBEC3B

1.27e-05372224840555
Pubmed

Requirement for CD4(+) T cells in the Friend murine retrovirus neutralizing antibody response: evidence for functional T cells in genetic low-recovery mice.

APOBEC3D APOBEC3B

1.27e-0537229765497
Pubmed

Biochemical and biological studies of mouse APOBEC3.

APOBEC3D APOBEC3B

1.27e-05372224453360
Pubmed

APOBEC3 inhibition of mouse mammary tumor virus infection: the role of cytidine deamination versus inhibition of reverse transcription.

APOBEC3D APOBEC3B

1.27e-05372223449789
Pubmed

APOBEC3-independent interferon-induced viral clearance in hepatitis B virus transgenic mice.

APOBEC3D APOBEC3B

1.27e-05372218434399
Pubmed

Induction of APOBEC3 in vivo causes increased restriction of retrovirus infection.

APOBEC3D APOBEC3B

1.27e-05372219153238
Pubmed

Apobec3 encodes Rfv3, a gene influencing neutralizing antibody control of retrovirus infection.

APOBEC3D APOBEC3B

1.27e-05372218772436
Pubmed

Mouse APOBEC3 restricts friend leukemia virus infection and pathogenesis in vivo.

APOBEC3D APOBEC3B

1.27e-05372218786991
Pubmed

Anti-Friend virus antibody is associated with recovery from viremia and loss of viral leukemia cell-surface antigens in leukemic mice. Identification of Rfv-3 as a gene locus influencing antibody production.

APOBEC3D APOBEC3B

1.27e-053722286744
Pubmed

Host restriction of murine gammaherpesvirus 68 replication by human APOBEC3 cytidine deaminases but not murine APOBEC3.

APOBEC3D APOBEC3B

1.27e-05372224725948
Pubmed

The glycosylated Gag protein of a murine leukemia virus inhibits the antiretroviral function of APOBEC3.

APOBEC3D APOBEC3B

1.27e-05372220702647
Pubmed

Persistent Friend virus replication and disease in Apobec3-deficient mice expressing functional B-cell-activating factor receptor.

APOBEC3D APOBEC3B

1.27e-05372220980520
Pubmed

Identification of a non-H-2 gene (Rfv-3) influencing recovery from viremia and leukemia induced by Friend virus complex.

APOBEC3D APOBEC3B

1.27e-053722284359
Pubmed

Adaptive evolution of Mus Apobec3 includes retroviral insertion and positive selection at two clusters of residues flanking the substrate groove.

APOBEC3D APOBEC3B

1.27e-05372220617165
Pubmed

Impact of Suboptimal APOBEC3G Neutralization on the Emergence of HIV Drug Resistance in Humanized Mice.

APOBEC3D APOBEC3B

1.27e-05372231801862
Pubmed

Apobec-mediated retroviral hypermutation in vivo is dependent on mouse strain.

APOBEC3D APOBEC3B

1.27e-05372239208378
Pubmed

Deamination hotspots among APOBEC3 family members are defined by both target site sequence context and ssDNA secondary structure.

APOBEC3D APOBEC3B

1.27e-05372231943071
Pubmed

Innate retroviral restriction by Apobec3 promotes antibody affinity maturation in vivo.

APOBEC3D APOBEC3B

1.27e-05372220566830
Pubmed

Chromosome mapping of Rfv3, a host resistance gene to Friend murine retrovirus.

APOBEC3D APOBEC3B

1.27e-0537227884913
Pubmed

N-linked glycosylation protects gammaretroviruses against deamination by APOBEC3 proteins.

APOBEC3D APOBEC3B

1.27e-05372225505062
Pubmed

Molecular analysis of γ1, γ3, and α class switch recombination junctions in APOBEC3-deficient mice using high-throughput sequencing.

APOBEC3D APOBEC3B

1.27e-05372231595054
Pubmed

Role of APOBEC3 in genetic diversity among endogenous murine leukemia viruses.

APOBEC3D APOBEC3B

1.27e-05372217967065
Pubmed

Inhibition of xenotropic murine leukemia virus-related virus by APOBEC3 proteins and antiviral drugs.

APOBEC3D APOBEC3B

1.27e-05372220335265
Pubmed

Deaminase-Dead Mouse APOBEC3 Is an In Vivo Retroviral Restriction Factor.

APOBEC3D APOBEC3B

1.27e-05372229593034
Pubmed

Mouse APOBEC3 interferes with autocatalytic cleavage of murine leukemia virus Pr180gag-pol precursor and inhibits Pr65gag processing.

APOBEC3D APOBEC3B

1.27e-05372231830125
Pubmed

Noninfectious retrovirus particles drive the APOBEC3/Rfv3 dependent neutralizing antibody response.

APOBEC3D APOBEC3B

1.27e-05372221998583
Pubmed

Direct inhibition of human APOBEC3 deaminases by HIV-1 Vif independent of the proteolysis pathway.

APOBEC3D APOBEC3B

1.27e-05372238115583
Pubmed

Effects of zidovudine on Friend virus complex infection in Rfv-3r/s genotype-containing mice used as a model for HIV infection.

APOBEC3D APOBEC3B

1.27e-0537222157836
Pubmed

Distinctive High Expression of Antiretroviral APOBEC3 Protein in Mouse Germinal Center B Cells.

APOBEC3D APOBEC3B

1.27e-05372235458563
Pubmed

Two genetic determinants acquired late in Mus evolution regulate the inclusion of exon 5, which alters mouse APOBEC3 translation efficiency.

APOBEC3D APOBEC3B

1.27e-05372222275865
Pubmed

Antibody-induced modulation of Friend virus cell surface antigens decreases virus production by persistent erythroleukemia cells: influence of the Rfv-3 gene.

APOBEC3D APOBEC3B

1.27e-053722293683
Pubmed

Enhanced replication and pathogenesis of Moloney murine leukemia virus in mice defective in the murine APOBEC3 gene.

APOBEC3D APOBEC3B

1.27e-05372219150103
Pubmed

Initial sequencing and comparative analysis of the mouse genome.

APOBEC3D APOBEC3B

1.27e-05372212466850
Pubmed

Sertoli cell-only phenotype and scRNA-seq define PRAMEF12 as a factor essential for spermatogenesis in mice.

PRAMEF14 PRAMEF1 PRAMEF13

1.27e-052272331729367
Pubmed

Oogenesis specific genes (Nobox, Oct4, Bmp15, Gdf9, Oogenesin1 and Oogenesin2) are differentially expressed during natural and gonadotropin-induced mouse follicular development.

PRAMEF14 PRAMEF1 PRAMEF13

1.46e-052372319480014
Pubmed

Catalog of mRNA expression patterns for DNA methylating and demethylating genes in developing mouse lower urinary tract.

APOBEC3D AICDA APOBEC3B

1.67e-052472323920106
Pubmed

MAGE-B4, a binding partner of PRAMEF12, is dispensable for spermatogenesis and male fertility in mice.

PRAMEF14 PRAMEF1 PRAMEF13

1.89e-052572337451217
Pubmed

Incomplete reactivation of Oct4-related genes in mouse embryos cloned from somatic nuclei.

PRAMEF14 PRAMEF1 PRAMEF13

1.89e-052572312620990
Pubmed

Murine APOBEC1 is a powerful mutator of retroviral and cellular RNA in vitro and in vivo.

APOBEC3D APOBEC3B

2.53e-05472218983852
Pubmed

APOBEC3 regulates keratinocyte differentiation and expression of Notch3.

APOBEC3D APOBEC3B

2.53e-05472231400166
Pubmed

Ribonuclease L is not critical for innate restriction and adaptive immunity against Friend retrovirus infection.

APOBEC3D APOBEC3B

2.53e-05472223725696
Pubmed

APOBEC3G promotes liver metastasis in an orthotopic mouse model of colorectal cancer and predicts human hepatic metastasis.

APOBEC3D APOBEC3B

2.53e-05472221985787
Pubmed

APOBEC3A functions as a restriction factor of human papillomavirus.

APOBEC3D APOBEC3B

2.53e-05472225355878
Pubmed

Human and murine APOBEC3s restrict replication of koala retrovirus by different mechanisms.

APOBEC3D APOBEC3B

2.53e-05472226253512
Pubmed

Reversed functional organization of mouse and human APOBEC3 cytidine deaminase domains.

APOBEC3D APOBEC3B

2.53e-05472217020885
Pubmed

Persistence of viremia and production of neutralizing antibodies differentially regulated by polymorphic APOBEC3 and BAFF-R loci in friend virus-infected mice.

APOBEC3D APOBEC3B

2.53e-05472220375169
Pubmed

APOBEC3 proteins expressed in mammary epithelial cells are packaged into retroviruses and can restrict transmission of milk-borne virions.

APOBEC3D APOBEC3B

2.53e-05472221147467
Pubmed

Mice deficient in APOBEC2 and APOBEC3.

APOBEC3D APOBEC3B

2.53e-05472216055735
Pubmed

The incorporation of APOBEC3 proteins into murine leukemia viruses.

APOBEC3D APOBEC3B

2.53e-05472218572219
Pubmed

Restriction of foamy viruses by APOBEC cytidine deaminases.

APOBEC3D APOBEC3B

2.53e-05472216378963
Pubmed

Multifaceted HIV-1 Vif interactions with human E3 ubiquitin ligase and APOBEC3s.

APOBEC3D APOBEC3B

2.53e-05472232893454
Pubmed

Ancient adaptive evolution of the primate antiviral DNA-editing enzyme APOBEC3G.

APOBEC3D APOBEC3B

2.53e-05472215269786
Pubmed

Small molecular compounds inhibit HIV-1 replication through specifically stabilizing APOBEC3G.

APOBEC3D APOBEC3B

2.53e-05472220363737
Pubmed

APOBEC3G cytidine deaminase inhibits retrotransposition of endogenous retroviruses.

APOBEC3D APOBEC3B

2.53e-05472215674295
Pubmed

Virus-specific CD8+ T cells upregulate programmed death-1 expression during acute friend retrovirus infection but are highly cytotoxic and control virus replication.

APOBEC3D APOBEC3B

2.53e-05472221873525
Pubmed

APOBEC3 enzymes restrict marginal zone B cells.

APOBEC3D APOBEC3B

2.53e-05472225501566
Pubmed

Restriction by APOBEC3 proteins of endogenous retroviruses with an extracellular life cycle: ex vivo effects and in vivo "traces" on the murine IAPE and human HERV-K elements.

APOBEC3D APOBEC3B

2.53e-05472218702815
Pubmed

HIV-1 Vif versus the APOBEC3 cytidine deaminases: an intracellular duel between pathogen and host restriction factors.

APOBEC3D APOBEC3B

2.53e-05472220538015
Pubmed

The role of APOBEC3B in lung tumor evolution and targeted cancer therapy resistance.

APOBEC3D APOBEC3B

2.53e-05472238049664
Pubmed

Tetherin/BST-2 promotes dendritic cell activation and function during acute retrovirus infection.

APOBEC3D APOBEC3B

2.53e-05472226846717
Pubmed

Vaccinia virus replication is not affected by APOBEC3 family members.

APOBEC3D APOBEC3B

2.53e-05472217052331
Pubmed

Type I interferon signaling is required for the APOBEC3/Rfv3-dependent neutralizing antibody response but not innate retrovirus restriction.

APOBEC3D APOBEC3B

2.53e-05472228415995
Pubmed

Immunity to retroviral infection: the Friend virus model.

APOBEC3D APOBEC3B

2.53e-0547229223268
Pubmed

Species-specific restriction of apobec3-mediated hypermutation.

APOBEC3D APOBEC3B

2.53e-05472218032489
Pubmed

Reassessment of murine APOBEC1 as a retrovirus restriction factor in vivo.

APOBEC3D APOBEC3B

2.53e-05472225303118
Pubmed

APOBEC3 inhibits mouse mammary tumour virus replication in vivo.

APOBEC3D APOBEC3B

2.53e-05472217259974
Pubmed

HIV restriction by APOBEC3 in humanized mice.

APOBEC3D APOBEC3B

2.53e-05472223555255
Cytoband1p36.21

PRAMEF14 PRAMEF1 PRAMEF13

1.37e-04637231p36.21
CytobandEnsembl 112 genes in cytogenetic band chr1p36

TMCO4 PRAMEF14 ASAP3 PRAMEF1 PRAMEF13 PADI2

7.10e-04681726chr1p36
GeneFamilyApolipoprotein B mRNA editing enzyme catalytic subunits

APOBEC3D AICDA APOBEC3B

4.85e-0612523406
GeneFamilyPRAME family

PRAMEF14 PRAMEF1 PRAMEF13

4.35e-0524523686
GeneFamilyArfGAPs

ADAP1 ASAP3 ADAP2

1.15e-0433523395
GeneFamilyPleckstrin homology domain containing|Rho guanine nucleotide exchange factors|C2 domain containing

ADAP1 RASGRF1 ASAP3 ADAP2 PHLPP2

3.08e-04206525682
GeneFamilyRing finger proteins|Tripartite motif containing|ARF GTPase family

TRIM49 TRIM49C TRIM49B

2.58e-039552359
GeneFamilyETS transcription factor family

ERF ELF3

2.92e-0328522534
ToppCellLPS-IL1RA+antiTNF-Endothelial-Epi-like-Gen_Cap|LPS-IL1RA+antiTNF / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2

PALD1 ATP6V0A4 ANTKMT TMPO ROBO3 MYO15A CBX2

3.34e-09142727d52da766e031f7409eb5a7a9fa88f48e14a79d8b
ToppCellLPS-IL1RA+antiTNF-Endothelial-Epi-like|LPS-IL1RA+antiTNF / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2

PALD1 ATP6V0A4 ANTKMT TMPO ROBO3 MYO15A CBX2

3.34e-09142727a05b320cf182b2aaf18df7c40045dc65b659bf20
ToppCellLPS-IL1RA-Myeloid-Dendritic_cells-Monocytes-Macrophages|LPS-IL1RA / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2

CLCN4 NT5DC2 PADI2 APOBEC3B ADAP2

4.36e-06149725a464c0fd54e3c9e1d40d95b49489cb9371dd7c24
ToppCellMonocytes-IFN-activated_Monocytes|Monocytes / Immune cells in Rheumatoid Arthritis Joint Synovial Tissues

RSAD2 PIEZO2 HLA-B BAZ2A OAS2

9.79e-061767256a4b403ee3e4dc4f23fbd7a154011e41fd429a9e
ToppCellControl-Epithelial_alveolar-AT_2|Control / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2

LMO7 ATP6V0A4 ELF3 CLMP PADI2

1.21e-0518472551e129b3fcc2df083eda05a3afe3717218b1e52b
ToppCellControl-Epithelial_alveolar-AT_2-AT2_Progenitor|Control / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2

LMO7 ATP6V0A4 ELF3 CLMP PADI2

1.25e-051857258ca1374501eca01d8468130b74d50abfd4329fbe
ToppCellrenal_medulla_nuclei-Renal_AKI_(acute_kidney_injury)|renal_medulla_nuclei / Celltypes from Cells and Nuclei per compartment and clinical group

MGAT4B SLC26A3 RSAD2 OAS2 ELF3

1.61e-05195725633c7668fe365f7b0f7851cdc442d5dd89c454e2
ToppCellC_05|World / shred on cell type and cluster

SLC26A3 RSAD2 HLA-B LMO7 PHLPP2

1.65e-05196725bf4dfb460a153dbafb2b9b12b360c8757cec22cd
ToppCellControl_saline-Epithelial_alveolar-AT_2-Differentiating_AT2|Control_saline / Treatment groups by lineage, cell group, cell type

LMO7 ATP6V0A4 ELF3 CLMP PADI2

1.69e-0519772544a59dfb889577b3160a5b13ada1276771a00241
ToppCellLPS_anti-TNF-Epithelial_alveolar-AT_2-Differentiating_AT2|LPS_anti-TNF / Treatment groups by lineage, cell group, cell type

LMO7 ATP6V0A4 ELF3 CLMP PADI2

1.69e-051977251485933986921ff45669d9b7501c8d17050b3e97
ToppCellControl_saline-Epithelial_alveolar-AT_2|Control_saline / Treatment groups by lineage, cell group, cell type

LMO7 ATP6V0A4 ELF3 CLMP PADI2

1.69e-05197725b8f62fcd6eb8f47b3cc41f616126f82c68a36e87
ToppCellSigmoid-Dendritic_cell-cDC1|Dendritic_cell / Region, Cell class and subclass

MGAT4B CLCN4 ZKSCAN2 ROBO3 SCAI

1.81e-0520072509deb831fc2c8a8867cc850f3aa094a5e48489ff
ToppCell5'-Adult-LargeIntestine-Epithelial-mature_enterocytic|Adult / Celltypes from developing, pediatric, Crohn's, & adult GI tract

SLC26A3 LMO7 ELF3 PADI2 PCK1

1.81e-052007253f29823952a4303451997dd5177a51179bd20540
ToppCell5'-Adult-LargeIntestine-Epithelial-mature_enterocytic-Colonocyte|Adult / Celltypes from developing, pediatric, Crohn's, & adult GI tract

SLC26A3 LMO7 ELF3 PADI2 PCK1

1.81e-05200725b2fa6e44ace5897766792ed97ffafc11555175e7
ToppCellfacs-Lung-18m-Hematologic-myeloid-classical_monocyte-classical_monocyte_l2-17-52|18m / method, tissue, age, lineage, sublineage, cell ontologies, cell type and subtype

TRAF3 GALNT9 ADAP2 ADSS1

9.22e-0514672426493014daa432db721613ef480d133f3da9eb58
ToppCellfacs-Lung-3m-Hematologic-myeloid-intermediate_monocyte|3m / method, tissue, age, lineage, sublineage, cell ontologies, cell type and subtype

ADAP1 OAS2 MAP3K15 ADSS1

1.25e-04158724b35bab2b93d0af821bfae18a358eb7dddaf3860f
ToppCellfacs-Lung-3m-Hematologic-myeloid-intermediate_monocyte-intermediate_monocyte_l4|3m / method, tissue, age, lineage, sublineage, cell ontologies, cell type and subtype

ADAP1 OAS2 MAP3K15 ADSS1

1.25e-041587247bd4a64a610eb1cbcd3d07ea5258a55107cf6c00
ToppCellE16.5-Immune-Immune_Lymphocytic_T/NK-Lymphocytic_ILC-NK-NK-NK_mature|E16.5 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif

TRAF3 EPOP MAP3K15 PADI2

1.31e-04160724b2d8940ea8c068273b7da1589d3d6ae5110d8209
ToppCellPBMC_fresh-frozen-Severe-critical_progression_d03-09-Myeloid-Granulocytic-Neutrophil-Neu_c3-CST7|Severe-critical_progression_d03-09 / Compartment, severity and other cell annotations on 10x 3' data (130k)

RSAD2 FBXO8 CMTM2 PADI2

1.31e-04160724913e59cecf3b1bdd1ef32b4e320042b9bbdb54bc
ToppCellE16.5-Immune-Immune_Lymphocytic_T/NK-Lymphocytic_ILC-NK|E16.5 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif

TRAF3 EPOP MAP3K15 PADI2

1.31e-041607249caab1bb63c7e66c44783852ee75b16bb40fa594
ToppCellrenal_medulla_nuclei-Adult_normal_reference-Epithelial-Distal_tubule_epithelial_cell-kidney_distal_convoluted_tubule_epithelial_cell-Distal_Convoluted_Tubule_Cell_Type_1|Adult_normal_reference / Celltypes from Cells and Nuclei per compartment and clinical group

SLC12A3 GLB1L3 KIF19 ASAP3

1.31e-041607248bcdbcfdf1e0ace6053e8de82762f6e2f86bba7a
ToppCell3'-GW_trimst-1.5-LargeIntestine-Endothelial-blood_vessel_EC-Fetal_venous_EC|GW_trimst-1.5 / Celltypes from developing, pediatric, Crohn's, & adult GI tract

ERF ADGRG2 KIF19 TECPR1

1.31e-0416072433050dc646762dc7e9dcc4a12c618e1ba1ce5a4d
ToppCellrenal_medulla_nuclei-Adult_normal_reference-Epithelial-Distal_tubule_epithelial_cell-kidney_distal_convoluted_tubule_epithelial_cell|Adult_normal_reference / Celltypes from Cells and Nuclei per compartment and clinical group

SLC12A3 GLB1L3 KIF19 ASAP3

1.31e-041607242d391ba6f7adb55dfa89feecc10cc9ce97e5fe74
ToppCellE16.5-Immune-Immune_Lymphocytic_T/NK|E16.5 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif

TRAF3 EPOP MAP3K15 PADI2

1.31e-04160724229841be7b984a00a301cd5d88c11226a90d8a88
ToppCellE16.5-Immune-Immune_Lymphocytic_T/NK-Lymphocytic_ILC-NK-NK|E16.5 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif

TRAF3 EPOP MAP3K15 PADI2

1.31e-0416072499c9ae2041445539fada842e1af01368669bfca0
ToppCellfacs-Lung-ENDOMUCIN-18m-Myeloid-Classical_Monocyte|Lung / Lung_Trachea - method, tissue, subtissue, age, lineage, cell ontology and free annotation

ADAP1 GALNT9 PADI2 ADSS1

1.51e-0416672482fa07632f7e586698fbf37381715b40f9f6ae3a
ToppCellfacs-Lung-ENDOMUCIN-18m-Myeloid-classical_monocyte|Lung / Lung_Trachea - method, tissue, subtissue, age, lineage, cell ontology and free annotation

ADAP1 GALNT9 PADI2 ADSS1

1.51e-041667240d03926452414f232c77fd15d5f48d148f9fca3b
ToppCellASK454-Epithelial-Transformed_epithelium|ASK454 / Donor, Lineage and Cell class of Lung cells from Dropseq

ROBO3 MYO15A PADI2 SCAI

1.73e-041727243986f0f098ef5e096c8d9ee3d335b8404083701f
ToppCellfacs-Large_Intestine-Proximal-24m-Epithelial-secretory_cell|Large_Intestine / Large_Intestine_Pancreas_Liver - method, tissue, subtissue, age, lineage, cell ontology and free annotation

TRAF3 NT5DC2 MELK ADSS1

1.77e-04173724766e712e4db440468a32971459c1d3354add611f
ToppCellfacs-Large_Intestine-Proximal-24m-Epithelial-Reg4/cKit+_deep_crypt_secretory_cells_(Distal)|Large_Intestine / Large_Intestine_Pancreas_Liver - method, tissue, subtissue, age, lineage, cell ontology and free annotation

TRAF3 NT5DC2 MELK ADSS1

1.77e-0417372440ef91afb366e87b5ba2951d2578ebfe04d042c0
ToppCellnormal_Lung-Fibroblasts-Mesothelial_cells|normal_Lung / Location, Cell class and cell subclass

GALNT9 ROBO3 BDKRB1 PCK1

1.89e-04176724f31d7234053085a82cf9d55aeedd1e04d34789c3
ToppCelldroplet-Liver-Hepatocytes-21m-Lymphocytic|Liver / Large_Intestine_Pancreas_Liver - method, tissue, subtissue, age, lineage, cell ontology and free annotation

PIEZO2 AICDA RASGRF1 ELF3

1.98e-041787244289e435d465b7a1490d13bf05278f4ed77d69cd
ToppCellControl-Epithelial_alveolar-AT_2-AT2|Control / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2

ATP6V0A4 ELF3 CLMP PADI2

2.15e-04182724e97681a4102f3095d5d9e90ad70f1dc46e90983a
ToppCellfacs-Mammary_Gland-Mammary_Gland-3m-Epithelial-luminal_epithelial_cell_of_mammary_gland|Mammary_Gland / Skin_Bladder_Kidney_Mammary_Gland - method, tissue, subtissue, age, lineage, cell ontology and free annotation

PIEZO2 RASGRF1 LMO7 PADI2

2.20e-041837247eaa6ef7c6cf848fd6489f97677f4406318da22f
ToppCellLPS-antiTNF-Epithelial_alveolar-AT_2-Differentiating_AT2|LPS-antiTNF / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2

LMO7 ATP6V0A4 ELF3 CLMP

2.24e-04184724ab2f06906fc7a9931dfa0864ef506832b07fb93e
ToppCelldroplet-Liver-Hepatocytes-21m-Lymphocytic-B_cell|Liver / Large_Intestine_Pancreas_Liver - method, tissue, subtissue, age, lineage, cell ontology and free annotation

PIEZO2 AICDA RASGRF1 ELF3

2.24e-041847245b0695b1fbc8e4230f8f0669373ea10af82a0130
ToppCelltumor_Lung-Fibroblasts-Mesothelial_cells|tumor_Lung / Location, Cell class and cell subclass

PIEZO2 GALNT9 BDKRB1 PCK1

2.24e-04184724b0a251030d127858e68cf164be158f209a4d720f
ToppCelldroplet-Liver-Hepatocytes-21m-Lymphocytic-B_cell|Liver / Large_Intestine_Pancreas_Liver - method, tissue, subtissue, age, lineage, cell ontology and free annotation

PIEZO2 AICDA RASGRF1 ELF3

2.24e-041847246485d0d34bdab337b747c0ea2d75e8fad8486b4d
ToppCellPBMC-Mild-cDC_9|Mild / Compartment, Disease Groups and Clusters

APOBEC3D RSAD2 OAS2 APOBEC3B

2.24e-041847242e0c9a2c40c892a2d435eafb31f1f838de9baf15
ToppCellControl-Epithelial_alveolar-AT_2-Differentiating_AT2|Control / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2

LMO7 ELF3 CLMP PADI2

2.29e-041857240d2add28ac1f4fa6de7699be009bf8391badaf4c
ToppCellPBMC-Control-cDC_10|Control / Compartment, Disease Groups and Clusters

SLC12A3 EPOP RASGRF1 CLMP

2.29e-041857244b5a7450fed912f340da16065c1e65d626dbe8d1
ToppCellfacs-Mammary_Gland-Mammary_Gland-21m-Epithelial-luminal_epithelial_cell_of_mammary_gland|Mammary_Gland / Skin_Bladder_Kidney_Mammary_Gland - method, tissue, subtissue, age, lineage, cell ontology and free annotation

PIEZO2 ADAP1 RASGRF1 GALNT9

2.34e-0418672402fbb02c495e7d64c4ab50e42e5197782f2c0816
ToppCellcritical-Myeloid-Monocyte-derived_Macrophage|Myeloid / Severity, Lineage and Cell class of Nasopharyngeal (NS) Samples from Patients and Controls

RSAD2 ASAP3 OAS2 PRAMEF13

2.38e-0418772472e4aec49ea0c5fe6cee2a1a46369dbc90cd3fad
ToppCelldroplet-Mammary_Gland-nan-18m-Epithelial-luminal_epithelial_cell_of_mammary_gland|Mammary_Gland / Skin_Bladder_Kidney_Mammary_Gland - method, tissue, subtissue, age, lineage, cell ontology and free annotation

PIEZO2 RASGRF1 LMO7 ELF3

2.58e-04191724c21e7904e06a5c90176f935f6822dbb5a1aa6755
ToppCell5'-Parenchyma_lung-Mesenchymal-Fibro-meso-mesothelial_cell-Mesothelium-Mesothelium_L.2.6.1.0|5' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5

GALNT9 ROBO3 BDKRB1 PCK1

2.58e-04191724b7713aba839e7a1f548b7b9d8893067bcc6d7ee7
ToppCellE17.5-Epithelial-epithelial_progenitor_cell|E17.5 / developmental_time, Lineage, Cell group, Cell type, Cell type_cellcyc-phase

LMO7 NT5DC2 ATP6V0A4 ELF3

2.58e-0419172468b717fce7d9349ef56255ee0c5e57fc67e50fd8
ToppCellCOVID-19-Myeloid-MoAM1,_IL1R2|Myeloid / Condition, Lineage and Cell class

RSAD2 HLA-B OAS2 APOBEC3B

2.64e-04192724be9d5685fa03563322f147a4b38ed31e4da59487
ToppCellFetal_29-31_weeks-Epithelial-alveolar_epithelial_cell_type_2|Fetal_29-31_weeks / Lineage, Cell type, age group and donor

RASGRF1 LMO7 ELF3 GGT2P

2.64e-04192724fb2f0e897228f808d9ff734ad05e9b49dc38fa50
ToppCellfacs-Thymus-Flowthrough-3m-Lymphocytic-proliferating_thymocyte;_DN_to_DP_transition,_dividing_(some_are_Cd8+/_Cd4+,_some_undergoing_VDJ_recombination)|Thymus / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation

NT5DC2 TMPO SKP2 MELK

2.64e-04192724e8d47504b744040a762ec9b670a66cc060b2ae86
ToppCell3'-GW_trimst-2-LargeIntestine-Epithelial-mature_enterocytic|GW_trimst-2 / Celltypes from developing, pediatric, Crohn's, & adult GI tract

SLC26A3 ELF3 PADI2 PCK1

2.69e-0419372432eb026d4317c1499d51294d396dfd5f293f9deb
ToppCellNS-critical-d_0-4-Lymphoid-NK|d_0-4 / Location, Severity, dps_group, Lineage and Cell class of Upper airway (combined)

APOBEC3D FBXO8 BIVM CLMP

2.69e-041937241b29525c5936d1b779253b8c20f059fa091c6127
ToppCell3'-GW_trimst-2-LargeIntestine-Epithelial-mature_enterocytic-Colonocyte|GW_trimst-2 / Celltypes from developing, pediatric, Crohn's, & adult GI tract

SLC26A3 ELF3 PADI2 PCK1

2.69e-04193724930df79b0600f43617052313294be33bcf5631f0
ToppCellTCGA-Adrenal-Primary_Tumor-Adrenocortical_carcinoma|TCGA-Adrenal / Sample_Type by Project: Shred V9

TMCO4 ASAP3 TMPO MAP3K15

2.69e-04193724c0d4da15d973cf6f8daa2b0af84b1baaf8491b83
ToppCell3'-GW_trimst-2-LargeIntestine-Epithelial|GW_trimst-2 / Celltypes from developing, pediatric, Crohn's, & adult GI tract

LMO7 ELF3 PADI2 PCK1

2.74e-0419472407d8e38cbc2c7f0564c14f7c365f345f901b73b2
ToppCell3'-Parenchyma_lung-Mesenchymal-Fibro-meso-mesothelial_cell-Mesothelium|3' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5

WFDC11 GALNT9 BDKRB1 PCK1

2.74e-04194724c578cf7c6b4d6f31f87dde8845de5b3891f16822
ToppCell3'-Parenchyma_lung-Mesenchymal-Fibro-meso|3' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5

WFDC11 GALNT9 BDKRB1 PCK1

2.74e-04194724f4286ae7bb8350c42d50727ee8688b80129714f6
ToppCellIPF-Endothelial-VE_Capillary_A|Endothelial / Disease state, Lineage and Cell class

PALD1 RSAD2 HLA-B LMO7

2.74e-04194724777ce41c3f22c591e2d81120f189b834e53ffb4b
ToppCell5'-Parenchyma_lung-Mesenchymal-Fibro-meso-mesothelial_cell|5' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5

GALNT9 ROBO3 BDKRB1 PCK1

2.74e-0419472479baee8b35b7707bbeb07c73b5e17b68bcd7bbc2
ToppCell5'-Parenchyma_lung-Mesenchymal-Fibro-meso|5' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5

GALNT9 ROBO3 BDKRB1 PCK1

2.74e-04194724f6e348f1f35c526cad6c349f1fdd0bd92d18aa3c
ToppCell3'-Parenchyma_lung-Mesenchymal-Fibro-meso-mesothelial_cell|3' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5

WFDC11 GALNT9 BDKRB1 PCK1

2.74e-0419472487461bd6d7f702c0a0f5e0c8ace3049125a51f9a
ToppCelldroplet-Mammary_Gland-nan-3m-Epithelial-luminal_epithelial_cell_of_mammary_gland|Mammary_Gland / Skin_Bladder_Kidney_Mammary_Gland - method, tissue, subtissue, age, lineage, cell ontology and free annotation

PIEZO2 RASGRF1 LMO7 PADI2

2.74e-04194724715e02e5f3250b1bfdc26b7dfd656ba4e705ea84
ToppCell5'-Parenchyma_lung-Mesenchymal-Fibro-meso-mesothelial_cell-Mesothelium|5' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5

GALNT9 ROBO3 BDKRB1 PCK1

2.74e-04194724ce599ed0dc181aea0584e426636de5098f34ebe6
ToppCellmoderate-Epithelial-IRC-IFNG_responsive_cell|moderate / Severity, Lineage and Cell class of Nasopharyngeal (NS) Samples from Patients and Controls

RSAD2 HLA-B LMO7 ELF3

2.80e-041957244ea79451b9c040650a74831b64a41d36b180ac0f
ToppCellTCGA-Adrenal-Primary_Tumor-Adrenocortical_carcinoma-Usual_Type|TCGA-Adrenal / Sample_Type by Project: Shred V9

TMCO4 ASAP3 TMPO MAP3K15

2.80e-04195724c3280bb6219e2eff5e24ef45aa2d76479a562122
ToppCellSmart-start-Cell-Wel_seq-Non-neoplastic-Myeloid-TAM-MG-TAM-MG_pro-infl_I|Smart-start-Cell-Wel_seq / Platform, Oncotype, Lineage, Cell_class, celltype (level4), mutation group

PALD1 OAS2 PADI2 ADAP2

2.80e-04195724b6bf75669f267ecdc96818c7022db852e37a9fe1
ToppCellfacs-Thymus-nan-3m-Lymphocytic-proliferating_thymocyte;_DN_to_DP_transition,_dividing_(some_are_Cd8+/_Cd4+,_some_undergoing_VDJ_recombination)|Thymus / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation

NT5DC2 TMPO SKP2 MELK

2.80e-0419572493c345e70d6c8ff5d12fd63d73228c1700b804a0
ToppCelldroplet-Mammary_Gland-nan-18m-Epithelial-luminal_epithelial_cell_of_mammary_gland|Mammary_Gland / Skin_Bladder_Kidney_Mammary_Gland - method, tissue, subtissue, age, lineage, cell ontology and free annotation

PIEZO2 RASGRF1 LMO7 ELF3

2.80e-0419572418220efbd2d6ce6aa7501744fe430b6b46f2fc30
ToppCellSepsis-Int-URO-Lymphocyte-B-Plasmablast|Int-URO / Disease, condition lineage and cell class

NT5DC2 FGF7 MELK APOBEC3B

2.85e-04196724e65b47d0ce1a5dd05f5f50e1639c8ec76fb42dc8
ToppCellCOVID-19-lung-Proliferative_fibroblast|lung / Disease (COVID-19 only), tissue and cell type

PIEZO2 CLMP MELK APOBEC3B

2.85e-041967242ce8a787f2731faa913d20342d73041d59468f27
ToppCellCOVID-19-lung-Proliferative_fibroblast|COVID-19 / Disease (COVID-19 only), tissue and cell type

PIEZO2 CLMP MELK APOBEC3B

2.85e-04196724ca91d5e325875e7444809b80fcbd491d8899ea36
ToppCellmild-Myeloid-Neutrophils_4|mild / Cohort 2 (Rhapsody WB + PBMC) with disease condition, lineage and cell classs

RSAD2 HLA-B CMTM2 PADI2

2.85e-04196724f8c98cded5550843322b1711e1a57c7e88cae861
ToppCellmild_COVID-19_(asymptomatic)|World / disease group, cell group and cell class (v2)

TRAF3 RSAD2 OAS2 ADAP2

2.85e-041967248cb3dcb3e5732f4bb060c87ca339b8997a1a8cd4
ToppCellmild-Myeloid-Neutrophils_2|mild / Cohort 2 (Rhapsody WB + PBMC) with disease condition, lineage and cell classs

RSAD2 CMTM2 OAS2 PADI2

2.85e-04196724e9f30eb8a3915c3b2af009c832bff9b349b65ae5
ToppCellSmart-start-Cell-Wel_seq-Non-neoplastic-Myeloid-TAM-MG-TAM-MG_aging_sig-G|Smart-start-Cell-Wel_seq / Platform, Oncotype, Lineage, Cell_class, celltype (level4), mutation group

PALD1 OAS2 PADI2 ADAP2

2.85e-04196724e54c08f88779f9fd453a4f5b85aed1f460d8a1e1
ToppCell5'-GW_trimst-2-LargeIntestine-Epithelial-mature_enterocytic|GW_trimst-2 / Celltypes from developing, pediatric, Crohn's, & adult GI tract

SLC26A3 ELF3 PADI2 PCK1

2.91e-04197724a6a27e5809ee2c9b56c7e06c35e4f140f9fa13ad
ToppCellNS-moderate-d_16-33-Epithelial-IRC-IFNG_responsive_cell|d_16-33 / Location, Severity, dps_group, Lineage and Cell class of Upper airway (combined)

RSAD2 HLA-B LMO7 ELF3

2.91e-041977248eda7d5a44b18c805c963235aea794e9223d1ac0
ToppCelldroplet-Thymus-nan-3m-Lymphocytic-DN_to_DP_transition,_dividing_(some_are_Cd8+/_Cd4+,_some_undergoing_VDJ_recombination)|Thymus / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation

NT5DC2 TMPO SKP2 MELK

2.91e-041977249b2c67de46bd59bf56c81a0d10b84cf4a041c120
ToppCelldroplet-Thymus-nan-21m-Lymphocytic-thymocyte|Thymus / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation

NT5DC2 TMPO SKP2 MELK

2.91e-04197724a0d463825b62de49466f9fa563405dda4387cfff
ToppCell390C-Myeloid-Dendritic|390C / Donor, Lineage, Cell class and subclass (all cells)

SLC12A3 EPOP PADI2 ADAP2

2.91e-04197724424526c94b9a73c1c28ddc65dfba53aba5c6b2d2
ToppCellTransverse-T_cell-cycling_gd_T|Transverse / Region, Cell class and subclass

TMPO MELK APOBEC3B CBX2

2.96e-041987245131b0b7d6c4dd8872cef9f2e233f59f751b4690
ToppCellSmart-start-Cell-Wel_seq-Non-neoplastic-Myeloid-TAM-MG-TAM-MG_pro-infl_I-G|Smart-start-Cell-Wel_seq / Platform, Oncotype, Lineage, Cell_class, celltype (level4), mutation group

PALD1 RSAD2 OAS2 PADI2

2.96e-04198724cc808d872d2404a79ec119bb0be62688a30c93a7
ToppCell3'-Adult-Distal_Rectal|Adult / Celltypes from developing, pediatric, Crohn's, & adult GI tract

SLC26A3 LMO7 ELF3 PADI2

2.96e-041987247ad7726fc405806b1d7824f58548073ea5e0c70b
ToppCell3'-Adult-Distal_Rectal-Epithelial-epithelial_progenitor_cell-TA|Adult / Celltypes from developing, pediatric, Crohn's, & adult GI tract

SLC26A3 LMO7 ELF3 PADI2

2.96e-041987241fbec311f2c987ca90a023a5989128c05aa12d5c
ToppCellTransverse-(1)_T_cell-(18)_cycling_gd_T|Transverse / shred on region, Cell_type, and subtype

TMPO MELK APOBEC3B CBX2

2.96e-04198724396dddf7ebad41c3a91329b6a280623c0dfdcd2f
ToppCellBronchial-NucSeq-Epithelial-Epi_submucosal-gland-SMG_Duct|NucSeq / Cell types per location group and 10X technology with lineage, and cell group designations

TMCO4 ATP6V0A4 ELF3 PADI2

2.96e-041987241fe60443c11d34b6d2671af8f06e0dedc8d1558b
ToppCell3'-Child09-12-SmallIntestine-Epithelial-mature_enterocytic-Enterocyte|Child09-12 / Celltypes from developing, pediatric, Crohn's, & adult GI tract

SLC26A3 LMO7 ELF3 PCK1

2.96e-041987242967fb2d94662997bfe932ac299c80d6f182fb48
ToppCell3'-Pediatric_IBD-SmallIntestine-Epithelial-mature_enterocytic|Pediatric_IBD / Celltypes from developing, pediatric, Crohn's, & adult GI tract

SLC26A3 LMO7 ELF3 PCK1

2.96e-041987248fac96132663f54566136ef54b53684d31dfde32
ToppCell3'-Adult-Distal_Rectal-Epithelial|Adult / Celltypes from developing, pediatric, Crohn's, & adult GI tract

SLC26A3 LMO7 ELF3 PADI2

2.96e-04198724ceede961ad9af6a3159db7efaa5087bf38aafc2d
ToppCell3'-Child09-12-SmallIntestine-Epithelial-mature_enterocytic|Child09-12 / Celltypes from developing, pediatric, Crohn's, & adult GI tract

SLC26A3 LMO7 ELF3 PCK1

2.96e-04198724222a060c2c63d30da34e4b71c37aa27a048d7d09
ToppCell3'-Pediatric_IBD-SmallIntestine-Epithelial-mature_enterocytic-Enterocyte|Pediatric_IBD / Celltypes from developing, pediatric, Crohn's, & adult GI tract

SLC26A3 LMO7 ELF3 PCK1

2.96e-04198724c48b3f026b16d48b8eca9f74dc1e3f3f39a89322
ToppCell3'-Adult-Distal_Rectal-Epithelial-epithelial_progenitor_cell|Adult / Celltypes from developing, pediatric, Crohn's, & adult GI tract

SLC26A3 LMO7 ELF3 PADI2

2.96e-041987244f26a60e99f42343e5af7221723e108a1a1b7827
ToppCell356C-Myeloid-Dendritic-cDC_proliferating_1|356C / Donor, Lineage, Cell class and subclass (all cells)

PALD1 TMPO MELK ADAP2

2.96e-04198724f801157468e59b5d049f703feadc9bb0f11e85cc
ToppCell3'-Child09-12-SmallIntestine-Epithelial|Child09-12 / Celltypes from developing, pediatric, Crohn's, & adult GI tract

SLC26A3 LMO7 ELF3 PCK1

3.02e-04199724043c65bdf54a1bf0e483fea9ffc042ff5b271764
ToppCellbackground-Kupffer_cells|World / Sample and Cell Type and Tumor Cluster (all cells)

SLC26A3 HLA-B PCK1 ADAP2

3.02e-0419972491d229f3515d49639bcb5505e6aec4a9abade81c
ToppCell5'-Adult|5' / Celltypes from developing, pediatric, Crohn's, & adult GI tract

SLC26A3 HLA-B ELF3 PCK1

3.02e-041997248b7b1fcea9a06522fdfab85d0dfd33010ae96d75
ToppCellNS-critical-d_16-33-Lymphoid-NKT-proliferating|d_16-33 / Location, Severity, dps_group, Lineage and Cell class of Upper airway (combined)

AICDA TMPO MELK APOBEC3B

3.02e-0419972431b144bb209c629e12156f4d9c9cec79baffffb9
ToppCell10x5'v1-week_14-16-Mesenchymal_myocytic-stroma-muscle_stem_cell|week_14-16 / cell types per 3 fetal stages;per 3',per 5'

ABCG4 FGF7 CLMP FER1L5

3.02e-041997246200618e029063486719479c41eaf31798bd13cf
ToppCell3'-Child04-06-SmallIntestine-Epithelial-mature_enterocytic-Enterocyte|Child04-06 / Celltypes from developing, pediatric, Crohn's, & adult GI tract

SLC26A3 LMO7 ELF3 PCK1

3.02e-041997240181c13379f869be47804cdb11bbdabcd30b9b23
ToppCell3'-Child04-06-SmallIntestine-Epithelial-mature_enterocytic|Child04-06 / Celltypes from developing, pediatric, Crohn's, & adult GI tract

SLC26A3 LMO7 ELF3 PCK1

3.02e-04199724ee981046217e8759610eb58a670d98f32cd83abc
ToppCellControl_saline-Epithelial_alveolar-AT_1-Differentiating_AT2|Control_saline / Treatment groups by lineage, cell group, cell type

TMCO4 LMO7 ELF3 SCAI

3.08e-04200724eac33be484dc443794e66e473f03e98406c2983e
Diseasepost-operative acute kidney injury, response to surgery

CLMP PHLPP2

7.35e-056662EFO_0009951, EFO_0009955
Disease3-hydroxyphenylacetic acid measurement

PIEZO2 ADGRG2

4.41e-0414662EFO_0010448
Diseasesusceptibility to chronic sinus infection measurement

ADGRG2 TSNARE1 MAP3K15

4.83e-0468663EFO_0008419
Diseaseperceived unattractiveness to mosquitos measurement

CDC40 HLA-B CLMP

5.71e-0472663EFO_0008380
DiseaseLung Injury

FGF7 ELF3

1.01e-0321662C0273115
DiseaseChronic Lung Injury

FGF7 ELF3

1.01e-0321662C2350344

Protein segments in the cluster

PeptideGeneStartEntry
KLRFKRRWSEDCRLE

ERF

481

P50548
WKYRVFLRDELCIKQ

C21orf140

86

B9A014
REGPCWRKRGYKTLL

ABCG4

71

Q9H172
GRLFRTKVWELYKQC

BDKRB1

316

P46663
IRRVWQKRKCGVKYG

ASAP3

316

Q8TDY4
CYEVKIKRGRSNLLW

APOBEC3D

36

Q96AK3
DRILKDRRKKVIGWY

ABRAXAS2

81

Q15018
CYEVKIKRGRSNLLW

APOBEC3B

36

Q9UH17
SYRKNKWIVEGRLRR

BAZ2A

1001

Q9UIF9
VAKENVRKQWRRYLC

ADGRG2

881

Q8IZP9
VRKQWRRYLCCGKLR

ADGRG2

886

Q8IZP9
KNVRWAKGRRETYLC

AICDA

16

Q9GZX7
IKQRKVLDLRRWYCI

BIVM

191

Q86UB2
KRGRPRKLSKEYWDC

ELF3

246

P78545
CQLLREQWIRAKYER

ADAP1

101

O75689
WCRRRKTTRLGKYPV

CLCN4

356

P51793
LVLKEQWIRAKYERR

ADAP2

106

Q9NPF8
SVCYRRKDLWKVSLR

ANTKMT

126

Q9BQD7
LRRLKKYDNCWLALT

PCK1

66

P35558
YLTDAKRRLRKVVWV

PALD1

531

Q9ULE6
IRRQRLKGDAWVYKR

MELK

626

Q14680
ATVGRRYLWLKDCKI

TMPO

646

P42166
KERVRWRTKQNLDYC

MGAT4B

236

Q9UQ53
RRYLKLRAEWRCQVE

MYO15A

1966

Q9UKN7
LRQRLKCRSFKWYLE

GALNT9

436

Q9HCQ5
REYWRDRLLKLKACG

GLB1L3

101

Q8NCI6
LDLGRVCLRKWGYRR

METTL14

241

Q9HCE5
CTRTLNWKKLRIYLD

FBXO8

176

Q9NRD0
GWLYLRDRVCSKKDI

LMO7

46

Q8WWI1
RCLDWNRDILKKELG

PADI2

546

Q9Y2J8
DLIRLVKHWYKECER

OAS2

541

P29728
WLRRYLENGKDKLER

HLA-B

191

P01889
VIIYNLTRLCRWDKR

PANX3

286

Q96QZ0
RALKWREEQRKECYA

KIF19

471

Q2TAC6
REWYCRECREKDPKL

CXXC1

66

Q9P0U4
RLRKGKLEYLVKWRG

CBX2

21

Q14781
DRLIRRSKLWCYAKG

EPOP

246

A6NHQ4
CRTQWYLRIDKRGKV

FGF7

71

P21781
LWYVFCRDRKVLREG

GGT2P

191

P36268
SWPRLIRKLRCYLKE

PRAMEF13

216

Q5VWM6
RKDSERRAILYKILW

MAP3K15

1006

Q6ZN16
RCWKDYVNLRLEAIR

TRIM49

166

P0CI25
KRRCGWLDLMILRYA

ADSS1

336

Q8N142
KENRRKWKRYLLIGL

TMCO4

181

Q5TGY1
KLRRWCRDYRVAFKI

RSAD2

206

Q8WXG1
RKPKRYELRCIIWKT

FER1L5

1716

A0AVI2
SWPRLIRKLRCYLKE

PRAMEF14

216

Q5SWL7
CKIKLWEVYGERRCL

CDC40

311

O60508
SWPRLIRKLRCYLKE

PRAMEF1

216

O95521
AEIGRLWRKDKYDCL

SLC26A3

456

P40879
IKKVQSFLRGWLCRR

RASGRF1

206

Q13972
LVWLLIRRKDKERYE

CLMP

251

Q9H6B4
RGCRRYRWELKDSNK

CMTM2

66

Q8TAZ6
ELLKVSGVCKRWYRL

SKP2

116

Q13309
AAYVKRLCKGLSWRE

STK35

16

Q8TDR2
GVLIWKIRDYKRRKQ

TRAF3

416

Q13114
YCRRDVVDLKHKWRD

TSNARE1

176

Q96NA8
RDWLREDVKRGCVYL

PHLPP2

21

Q6ZVD8
LGLCAALYWRRKQRK

ROBO3

906

Q96MS0
KDFVRRRCWARKCKL

TECPR1

906

Q7Z6L1
RCWKDYVNLRLEAIR

TRIM49C

166

P0CI26
RRRRKAIAEIWPKYC

PIEZO2

1156

Q9H5I5
IPYLLGRKRRWSKCK

SLC12A3

846

P55017
RRGLWEKCQEYLRKI

SCAI

496

Q8N9R8
QWDRITRLEKGKIYR

NT5DC2

321

Q9H857
LDKIDRRYAWIKRQL

VPS53

281

Q5VIR6
LLRGLVQRWRYGKVC

ZDHHC16

31

Q969W1
YRWGLREKRAEVLKF

WDR59

871

Q6PJI9
ERLLWRICRGNVYLK

ATP6V0A4

186

Q9HBG4
SKYRKRECISGRQWE

ZKSCAN2

701

Q63HK3
RCWKDYVNLRLEAIR

TRIM49B

166

A6NDI0
RYDRKELLLEECWGK

WFDC11

31

Q8NEX6
RRELICWGDSVKLRY

AGL

481

P35573