Cluster composition

Functions

CategoryNameIntersectionWithQueryPValueGenesInTermGenesInQueryGenesInTermInQueryID
GeneOntologyMolecularFunctionlysine-acetylated histone binding

BRD2 BRD4 BRD9 SMARCA4 BRD3

2.14e-0830575GO:0070577
GeneOntologyMolecularFunctionacetylation-dependent protein binding

BRD2 BRD4 BRD9 SMARCA4 BRD3

2.54e-0831575GO:0140033
GeneOntologyMolecularFunctionmodification-dependent protein binding

BRD2 PHF20L1 BRD4 CHD5 BRD9 SMARCA4 BRD3

1.92e-06206577GO:0140030
GeneOntologyMolecularFunctionhistone binding

BRD2 BRD4 CHD5 BRD9 SMARCA4 BRD3 SSRP1

1.01e-05265577GO:0042393
GeneOntologyMolecularFunctionchromatin binding

BRD2 BRD4 CHD5 SMARCA4 BRD3 NKAP SSRP1 MED1 NKAPL

2.27e-04739579GO:0003682
GeneOntologyMolecularFunctionRNA polymerase II C-terminal domain binding

RTF1 BRD4

4.33e-0411572GO:0099122
GeneOntologyMolecularFunctionp53 binding

TAF3 BRD4 SMARCA4

1.39e-0377573GO:0002039
GeneOntologyBiologicalProcessRNA splicing

ARL6IP4 SRRM1 CWF19L2 RBMX2 SRRM4 CIR1 SLU7 RP9 IK CWC25 SREK1IP1 LARP7 SON

6.55e-105025613GO:0008380
GeneOntologyBiologicalProcessmRNA metabolic process

ARL6IP4 SRRM1 CWF19L2 TAF3 RBMX2 SRRM4 CIR1 DKC1 SLU7 MED1 IK CWC25 SREK1IP1 LARP7 SON

1.38e-089175615GO:0016071
GeneOntologyBiologicalProcessmRNA processing

ARL6IP4 SRRM1 CWF19L2 RBMX2 SRRM4 CIR1 SLU7 IK CWC25 SREK1IP1 LARP7 SON

2.24e-085515612GO:0006397
GeneOntologyBiologicalProcessmRNA splicing, via spliceosome

SRRM1 CWF19L2 RBMX2 SRRM4 SLU7 IK CWC25 LARP7 SON

4.77e-07358569GO:0000398
GeneOntologyBiologicalProcessRNA splicing, via transesterification reactions with bulged adenosine as nucleophile

SRRM1 CWF19L2 RBMX2 SRRM4 SLU7 IK CWC25 LARP7 SON

4.77e-07358569GO:0000377
GeneOntologyBiologicalProcessRNA splicing, via transesterification reactions

SRRM1 CWF19L2 RBMX2 SRRM4 SLU7 IK CWC25 LARP7 SON

5.24e-07362569GO:0000375
GeneOntologyBiologicalProcesshomophilic cell adhesion via plasma membrane adhesion molecules

PCDHA9 PCDHA13 PCDHA8 PCDHA6 PCDHA3 PCDHA1

1.14e-05187566GO:0007156
GeneOntologyBiologicalProcessprotein-DNA complex organization

RTF1 RSBN1 TAF3 BRD2 PHF20 BRD4 CHD5 BRD9 SMARCA4 BRD3 SSRP1 MED1

1.21e-059995612GO:0071824
GeneOntologyBiologicalProcessRNA processing

ARL6IP4 SRRM1 CWF19L2 RBMX2 SRRM4 CIR1 DKC1 SLU7 RP9 IK CWC25 SREK1IP1 LARP7 SON

3.47e-0515005614GO:0006396
GeneOntologyBiologicalProcessblastocyst growth

RTF1 BRD4 SMARCA4

9.76e-0533563GO:0001832
GeneOntologyBiologicalProcesscell-cell adhesion

PCDHA9 BRD2 ZNF608 BRD4 SMARCA4 PCDHA13 PCDHA8 PCDHA6 PCDHA3 PCDHA1 NKAP

1.28e-0410775611GO:0098609
GeneOntologyBiologicalProcesschromatin organization

RTF1 RSBN1 BRD2 PHF20 BRD4 CHD5 BRD9 SMARCA4 BRD3 SSRP1

1.32e-048965610GO:0006325
GeneOntologyBiologicalProcesssnRNA modification

DKC1 LARP7

1.51e-047562GO:0040031
GeneOntologyBiologicalProcesscell-cell adhesion via plasma-membrane adhesion molecules

PCDHA9 PCDHA13 PCDHA8 PCDHA6 PCDHA3 PCDHA1

2.00e-04313566GO:0098742
GeneOntologyBiologicalProcesspositive regulation of T-helper 17 cell lineage commitment

BRD2 BRD4

2.01e-048562GO:2000330
GeneOntologyBiologicalProcessregulation of T cell differentiation

BRD2 ZNF608 BRD4 SMARCA4 NKAP

3.66e-04226565GO:0045580
GeneOntologyBiologicalProcessregulation of protein localization to Cajal body

DKC1 LARP7

3.92e-0411562GO:1904869
GeneOntologyBiologicalProcesspositive regulation of protein localization to Cajal body

DKC1 LARP7

3.92e-0411562GO:1904871
GeneOntologyBiologicalProcessregulation of T-helper 17 cell lineage commitment

BRD2 BRD4

3.92e-0411562GO:2000328
GeneOntologyBiologicalProcesstranscription elongation by RNA polymerase II

RTF1 BRD4 MED1 LARP7

3.93e-04127564GO:0006368
GeneOntologyBiologicalProcessregulation of mRNA splicing, via spliceosome

SRRM1 SRRM4 LARP7 SON

4.17e-04129564GO:0048024
GeneOntologyBiologicalProcessprotein localization to nuclear body

DKC1 LARP7

4.70e-0412562GO:1903405
GeneOntologyBiologicalProcesssno(s)RNA 3'-end processing

DKC1 LARP7

4.70e-0412562GO:0031126
GeneOntologyBiologicalProcessprotein localization to Cajal body

DKC1 LARP7

4.70e-0412562GO:1904867
GeneOntologyBiologicalProcessnegative regulation of transcription by RNA polymerase II

RTF1 TAF3 ZNF608 CHD5 CIR1 SMARCA4 NKAP MED1 LARP7 LRRFIP1

4.81e-0410535610GO:0000122
GeneOntologyBiologicalProcessviral transcription

BRD4 SMARCA4 LARP7

5.26e-0458563GO:0019083
GeneOntologyBiologicalProcessprotein localization to chromosome

BRD2 DKC1 BRD3 IK

5.68e-04140564GO:0034502
GeneOntologyBiologicalProcessprotein-DNA complex assembly

TAF3 BRD2 SMARCA4 SSRP1 MED1

5.70e-04249565GO:0065004
GeneOntologyBiologicalProcesspositive regulation of T cell differentiation

BRD2 BRD4 SMARCA4 NKAP

6.31e-04144564GO:0045582
GeneOntologyBiologicalProcessDNA-templated transcription elongation

RTF1 BRD4 MED1 LARP7

6.31e-04144564GO:0006354
GeneOntologyBiologicalProcesssno(s)RNA processing

DKC1 LARP7

6.45e-0414562GO:0043144
GeneOntologyBiologicalProcessprotein localization to nucleoplasm

DKC1 LARP7

6.45e-0414562GO:1990173
GeneOntologyBiologicalProcesspositive regulation of T-helper 17 cell differentiation

BRD2 BRD4

6.45e-0414562GO:2000321
GeneOntologyBiologicalProcesspositive regulation of alpha-beta T cell differentiation

BRD2 BRD4 NKAP

7.02e-0464563GO:0046638
GeneOntologyBiologicalProcessregulation of lymphocyte differentiation

BRD2 ZNF608 BRD4 SMARCA4 NKAP

7.67e-04266565GO:0045619
GeneOntologyBiologicalProcesschromatin remodeling

RSBN1 BRD2 BRD4 CHD5 BRD9 SMARCA4 BRD3 SSRP1

8.26e-04741568GO:0006338
GeneOntologyBiologicalProcessregulation of mRNA processing

SRRM1 SRRM4 LARP7 SON

8.93e-04158564GO:0050684
GeneOntologyBiologicalProcesspositive regulation of lymphocyte differentiation

BRD2 BRD4 SMARCA4 NKAP

9.80e-04162564GO:0045621
GeneOntologyBiologicalProcesspositive regulation of cell fate commitment

BRD2 BRD4

1.08e-0318562GO:0010455
GeneOntologyBiologicalProcesssno(s)RNA metabolic process

DKC1 LARP7

1.20e-0319562GO:0016074
GeneOntologyBiologicalProcesstranscription preinitiation complex assembly

TAF3 SMARCA4 MED1

1.60e-0385563GO:0070897
GeneOntologyBiologicalProcessT-helper 17 cell lineage commitment

BRD2 BRD4

1.62e-0322562GO:0072540
GeneOntologyBiologicalProcessnucleosome disassembly

SMARCA4 SSRP1

1.62e-0322562GO:0006337
GeneOntologyBiologicalProcesspositive regulation of T-helper 17 type immune response

BRD2 BRD4

1.77e-0323562GO:2000318
GeneOntologyBiologicalProcesspositive regulation of alpha-beta T cell activation

BRD2 BRD4 NKAP

1.82e-0389563GO:0046635
GeneOntologyBiologicalProcessprotein-DNA complex disassembly

SMARCA4 SSRP1

1.92e-0324562GO:0032986
GeneOntologyBiologicalProcessregulation of alpha-beta T cell differentiation

BRD2 BRD4 NKAP

2.07e-0393563GO:0046637
GeneOntologyBiologicalProcessregulation of transcription elongation by RNA polymerase II

BRD4 MED1 LARP7

2.07e-0393563GO:0034243
GeneOntologyBiologicalProcessnucleolar large rRNA transcription by RNA polymerase I

TCOF1 SMARCA4

2.26e-0326562GO:0042790
GeneOntologyBiologicalProcessregulation of RNA splicing

SRRM1 SRRM4 LARP7 SON

2.41e-03207564GO:0043484
GeneOntologyBiologicalProcessT-helper cell lineage commitment

BRD2 BRD4

2.43e-0327562GO:0002295
GeneOntologyCellularComponentnuclear protein-containing complex

RTF1 SRRM1 CWF19L2 TAF3 PHF20 RBMX2 BRD4 CHD5 HMGXB4 BRD9 SMARCA4 DKC1 SLU7 SSRP1 MED1 IK CWC25 LARP7

1.28e-0813775718GO:0140513
GeneOntologyCellularComponentnuclear speck

ARL6IP4 SRRM1 BRD2 RBBP6 CHD5 CIR1 SLU7 RP9 IK CWC25 SON

1.98e-084315711GO:0016607
GeneOntologyCellularComponentnuclear body

ARL6IP4 SRRM1 BRD2 RBBP6 CHD5 CIR1 DKC1 SLU7 RP9 IK CWC25 SON

4.61e-069035712GO:0016604
GeneOntologyCellularComponentspliceosomal complex

SRRM1 CWF19L2 RBMX2 SLU7 IK CWC25

2.59e-05215576GO:0005681
GeneOntologyCellularComponentSWI/SNF superfamily-type complex

CHD5 HMGXB4 BRD9 SMARCA4

1.37e-0496574GO:0070603
GeneOntologyCellularComponentNSL complex

PHF20 PHF20L1

3.95e-0411572GO:0044545
GeneOntologyCellularComponentATPase complex

CHD5 HMGXB4 BRD9 SMARCA4

4.24e-04129574GO:1904949
GeneOntologyCellularComponenttranscription elongation factor complex

RTF1 BRD4 SSRP1

4.81e-0456573GO:0008023
GeneOntologyCellularComponentGBAF complex

BRD9 SMARCA4

6.51e-0414572GO:0140288
GeneOntologyCellularComponentchromatin

BRD2 PHF20 PHF20L1 BRD4 CHD5 HMGXB4 BRD9 SMARCA4 BRD3 SSRP1 MED1

1.93e-0314805711GO:0000785
GeneOntologyCellularComponentU2-type spliceosomal complex

RBMX2 IK CWC25

2.36e-0397573GO:0005684
GeneOntologyCellularComponentSWI/SNF complex

BRD9 SMARCA4

3.03e-0330572GO:0016514
GeneOntologyCellularComponentsmall nuclear ribonucleoprotein complex

RBMX2 SLU7 LARP7

3.12e-03107573GO:0030532
GeneOntologyCellularComponentSm-like protein family complex

RBMX2 SLU7 LARP7

4.21e-03119573GO:0120114
GeneOntologyCellularComponentribonucleoprotein complex

SRRM1 CWF19L2 RBMX2 DKC1 SLU7 ZCCHC17 IK CWC25 LARP7

4.74e-031194579GO:1990904
DomainCadherin_tail

PCDHA9 PCDHA13 PCDHA8 PCDHA6 PCDHA3 PCDHA1

1.07e-0937556PF15974
DomainCadherin_CBD

PCDHA9 PCDHA13 PCDHA8 PCDHA6 PCDHA3 PCDHA1

1.07e-0937556IPR031904
DomainCadherin_N

PCDHA9 PCDHA13 PCDHA8 PCDHA6 PCDHA3 PCDHA1

3.56e-0865556IPR013164
DomainCadherin_2

PCDHA9 PCDHA13 PCDHA8 PCDHA6 PCDHA3 PCDHA1

3.56e-0865556PF08266
DomainBROMODOMAIN_1

BRD2 BRD4 BRD9 SMARCA4 BRD3

7.46e-0837555PS00633
DomainBromodomain

BRD2 BRD4 BRD9 SMARCA4 BRD3

8.57e-0838555PF00439
DomainBET

BRD2 BRD4 BRD3

9.65e-084553PF17035
DomainNET_dom

BRD2 BRD4 BRD3

9.65e-084553IPR027353
DomainNET

BRD2 BRD4 BRD3

9.65e-084553PS51525
DomainBROMODOMAIN_2

BRD2 BRD4 BRD9 SMARCA4 BRD3

1.27e-0741555PS50014
DomainBROMO

BRD2 BRD4 BRD9 SMARCA4 BRD3

1.44e-0742555SM00297
DomainBromodomain

BRD2 BRD4 BRD9 SMARCA4 BRD3

1.44e-0742555IPR001487
Domain-

BRD2 BRD4 BRD9 SMARCA4 BRD3

1.44e-07425551.20.920.10
DomainZnF_C2HC

RBBP6 SLU7 ZCCHC17 RP9 SREK1IP1

5.72e-0755555SM00343
DomainZnf_CCHC

RBBP6 SLU7 ZCCHC17 RP9 SREK1IP1

5.72e-0755555IPR001878
DomainCadherin_CS

PCDHA9 PCDHA13 PCDHA8 PCDHA6 PCDHA3 PCDHA1

7.90e-07109556IPR020894
DomainBromodomain_CS

BRD2 BRD4 SMARCA4 BRD3

9.59e-0726554IPR018359
DomainCadherin

PCDHA9 PCDHA13 PCDHA8 PCDHA6 PCDHA3 PCDHA1

9.77e-07113556PF00028
DomainCADHERIN_1

PCDHA9 PCDHA13 PCDHA8 PCDHA6 PCDHA3 PCDHA1

9.77e-07113556PS00232
DomainCADHERIN_2

PCDHA9 PCDHA13 PCDHA8 PCDHA6 PCDHA3 PCDHA1

1.03e-06114556PS50268
Domain-

PCDHA9 PCDHA13 PCDHA8 PCDHA6 PCDHA3 PCDHA1

1.03e-061145562.60.40.60
DomainCA

PCDHA9 PCDHA13 PCDHA8 PCDHA6 PCDHA3 PCDHA1

1.08e-06115556SM00112
DomainCadherin-like

PCDHA9 PCDHA13 PCDHA8 PCDHA6 PCDHA3 PCDHA1

1.14e-06116556IPR015919
DomainCadherin

PCDHA9 PCDHA13 PCDHA8 PCDHA6 PCDHA3 PCDHA1

1.26e-06118556IPR002126
DomainZF_CCHC

RBBP6 SLU7 ZCCHC17 SREK1IP1

3.29e-0635554PS50158
DomainDUF3776

PHF20 PHF20L1

8.51e-062552PF12618
DomainDUF3776

PHF20 PHF20L1

8.51e-062552IPR022255
DomainSynMuv_product

NKAP NKAPL

8.51e-062552PF06047
DomainNKAP/UPF0396

NKAP NKAPL

8.51e-062552IPR009269
DomainRSBN1

RSBN1 RSBN1L

8.51e-062552IPR026306
DomainFam133

FAM133B FAM133A

8.51e-062552IPR026766
DomainCir_N

CIR1 CWC25

2.55e-053552PF10197
DomainCir_N

CIR1 CWC25

2.55e-053552SM01083
DomainCIR_N_dom

CIR1 CWC25

2.55e-053552IPR019339
DomainZinc_finger_PHD-type_CS

TAF3 PHF20 PHF20L1 CHD5

3.99e-0565554IPR019786
DomainZF_PHD_1

TAF3 PHF20 PHF20L1 CHD5

1.83e-0496554PS01359
Domain-

CHD5 HMGXB4 SSRP1

5.69e-04555531.10.30.10
DomainZnf_FYVE_PHD

TAF3 PHF20 PHF20L1 CHD5

9.20e-04147554IPR011011
DomainHMG_box_dom

CHD5 HMGXB4 SSRP1

9.28e-0465553IPR009071
DomainPHD

TAF3 PHF20 CHD5

1.40e-0375553PF00628
DomainZnf_PHD-finger

TAF3 PHF20 CHD5

1.63e-0379553IPR019787
DomainG_patch

GPATCH8 SON

2.07e-0323552SM00443
DomainG_patch_dom

GPATCH8 SON

2.07e-0323552IPR000467
DomainG-patch

GPATCH8 SON

2.07e-0323552PF01585
DomainG_PATCH

GPATCH8 SON

2.07e-0323552PS50174
DomainPHD

TAF3 PHF20 CHD5

2.29e-0389553SM00249
DomainZnf_PHD

TAF3 PHF20 CHD5

2.44e-0391553IPR001965
Domain-

RBBP6 ZCCHC17

2.64e-03265524.10.60.10
DomainZF_PHD_2

TAF3 PHF20 CHD5

2.76e-0395553PS50016
DomainTUDOR

PHF20 PHF20L1

2.85e-0327552SM00333
DomainTudor

PHF20 PHF20L1

3.51e-0330552IPR002999
DomainSNF2_N

CHD5 SMARCA4

3.99e-0332552PF00176
DomainSNF2_N

CHD5 SMARCA4

3.99e-0332552IPR000330
PathwayREACTOME_MRNA_SPLICING

SRRM1 CWF19L2 RBMX2 SLU7 NKAP IK CWC25

2.39e-07212307M14033
PathwayREACTOME_PROCESSING_OF_CAPPED_INTRON_CONTAINING_PRE_MRNA

SRRM1 CWF19L2 RBMX2 SLU7 NKAP IK CWC25

1.67e-06283307M13087
PathwayREACTOME_MRNA_SPLICING

SRRM1 RBMX2 SLU7 NKAP IK CWC25

3.48e-06201306MM15411
PathwayREACTOME_PROCESSING_OF_CAPPED_INTRON_CONTAINING_PRE_MRNA

SRRM1 RBMX2 SLU7 NKAP IK CWC25

2.18e-05277306MM15414
PathwayREACTOME_METABOLISM_OF_RNA

SRRM1 CWF19L2 RBMX2 DKC1 SLU7 NKAP IK CWC25

9.94e-05724308M16843
PathwayREACTOME_RNA_POLYMERASE_II_PRE_TRANSCRIPTION_EVENTS

RTF1 TAF3 SSRP1

6.63e-0481303M865
PathwayBIOCARTA_VDR_PATHWAY

SMARCA4 MED1

9.85e-0422302MM1370
PathwayREACTOME_GENE_EXPRESSION_TRANSCRIPTION

SRRM1 TAF3 PHF20 PHF20L1 SMARCA4 SLU7 SSRP1 MED1

1.03e-031022308MM15436
PathwayREACTOME_RHOBTB1_GTPASE_CYCLE

SRRM1 RBBP6

1.08e-0323302M41817
PathwayBIOCARTA_VDR_PATHWAY

SMARCA4 MED1

1.17e-0324302M13404
PathwayREACTOME_RHOBTB1_GTPASE_CYCLE

SRRM1 RBBP6

1.27e-0325302MM15608
PathwayREACTOME_METABOLISM_OF_RNA

SRRM1 RBMX2 SLU7 NKAP IK CWC25

1.59e-03612306MM15547
PathwayREACTOME_RNA_POLYMERASE_II_TRANSCRIPTION

RTF1 SRRM1 TAF3 BRD2 PHF20 SMARCA4 SLU7 SSRP1 MED1

1.78e-031387309M734
PathwayREACTOME_THE_PHOTOTRANSDUCTION_CASCADE

NMT2 CNGA1

1.96e-0331302MM14896
PathwayREACTOME_THE_PHOTOTRANSDUCTION_CASCADE

NMT2 CNGA1

2.35e-0334302M27183
PathwayREACTOME_RHOBTB_GTPASE_CYCLE

SRRM1 RBBP6

2.49e-0335302M41738
PathwayREACTOME_RHOBTB_GTPASE_CYCLE

SRRM1 RBBP6

2.78e-0337302MM15683
PathwayREACTOME_FORMATION_OF_WDR5_CONTAINING_HISTONE_MODIFYING_COMPLEXES

PHF20 PHF20L1

2.93e-0338302MM17073
Pubmed

MECP2 directly interacts with RNA polymerase II to modulate transcription in human neurons.

SRRM1 CWF19L2 TAF3 BRD2 TCOF1 USP42 RBBP6 RBMX2 BRD4 HMGXB4 SMARCA4 DKC1 ZCCHC17 PCDHA1 BRD3 GPATCH8 SSRP1 MED1 IK NKAPL SON

1.37e-171082572138697112
Pubmed

NuRD subunit CHD4 regulates super-enhancer accessibility in rhabdomyosarcoma and represents a general tumor dependency.

SRRM1 BRD2 TCOF1 RBBP6 BRD4 CHD5 SMARCA4 DKC1 BRD3 GPATCH8 SSRP1

1.46e-17103571132744500
Pubmed

The Nse5/6-like SIMC1-SLF2 complex localizes SMC5/6 to viral replication centers.

RSBN1 SRRM1 CWF19L2 TAF3 BRD2 RBBP6 BRD4 KTN1 HMGXB4 BRD9 SMARCA4 DKC1 SLU7 RP9 SSRP1 MED1 IK CWC25 RSBN1L SON

2.22e-17954572036373674
Pubmed

Large-scale characterization of HeLa cell nuclear phosphoproteins.

SRRM1 TAF3 BRD2 TCOF1 USP42 RBBP6 RBMX2 BRD4 SMARCA4 DKC1 BRD3 NKAP GPATCH8 SSRP1 MED1 LRRFIP1 SON

4.12e-15774571715302935
Pubmed

Systematic bromodomain protein screens identify homologous recombination and R-loop suppression pathways involved in genome integrity.

ARL6IP4 RSBN1 SRRM1 TAF3 BRD2 ZNF608 TCOF1 RBBP6 BRD4 CHD5 HMGXB4 BRD9 SMARCA4 BRD3 NKAP SSRP1 RSBN1L LARP7 SON

7.21e-151116571931753913
Pubmed

BAP1 regulation of the key adaptor protein NCoR1 is critical for γ-globin gene repression.

ARL6IP4 FAM133B RSBN1 SRRM1 TAF3 TCOF1 USP42 RBBP6 RBMX2 BRD9 SMARCA4 DKC1 ZCCHC17 RP9 NKAP SSRP1 SREK1IP1 RSBN1L LARP7 SON

1.03e-141318572030463901
Pubmed

The E3 ubiquitin ligase HECTD1 contributes to cell proliferation through an effect on mitosis.

ARL6IP4 FAM133B RSBN1 RBBP6 KTN1 SMARCA4 DKC1 SLU7 ZCCHC17 NKAP SSRP1 MED1 IK LARP7 LRRFIP1 SON

5.71e-14759571635915203
Pubmed

Monoallelic yet combinatorial expression of variable exons of the protocadherin-alpha gene cluster in single neurons.

PCDHA9 PCDHA13 PCDHA8 PCDHA6 PCDHA3 PCDHA1

7.31e-141557615640798
Pubmed

H4K20me0 recognition by BRCA1-BARD1 directs homologous recombination to sister chromatids.

ARL6IP4 SRRM1 BRD2 PHF20 TCOF1 USP42 RBBP6 RBMX2 BRD4 KTN1 HMGXB4 SMARCA4 DKC1 BRD3 GPATCH8 SSRP1 MED1 IK SON

1.01e-131294571930804502
Pubmed

Alpha protocadherins and Pyk2 kinase regulate cortical neuron migration and cytoskeletal dynamics via Rac1 GTPase and WAVE complex in mice.

PCDHA9 PCDHA13 PCDHA8 PCDHA6 PCDHA3 PCDHA1

1.80e-131757629911975
Pubmed

Genomic organization of the family of CNR cadherin genes in mice and humans.

PCDHA9 PCDHA13 PCDHA8 PCDHA6 PCDHA3 PCDHA1

2.70e-131857610662547
Pubmed

CNR/Pcdhalpha family in subplate neurons, and developing cortical connectivity.

PCDHA9 PCDHA13 PCDHA8 PCDHA6 PCDHA3 PCDHA1

2.70e-131857615570159
Pubmed

HDLBP Promotes Hepatocellular Carcinoma Proliferation and Sorafenib Resistance by Suppressing Trim71-dependent RAF1 Degradation.

ARL6IP4 RSBN1 SRRM1 TAF3 TCOF1 FAM133A RBMX2 KTN1 SMARCA4 DKC1 ZCCHC17 NKAP SSRP1 MED1 CWC25 RSBN1L LARP7 LRRFIP1 SON

2.82e-131371571936244648
Pubmed

The in vivo Interaction Landscape of Histones H3.1 and H3.3.

SRRM1 TAF3 BRD2 PHF20L1 RBMX2 BRD4 CHD5 HMGXB4 BRD9 SMARCA4 BRD3 GPATCH8 SSRP1 MED1

8.28e-13608571436089195
Pubmed

The RNA-mediated estrogen receptor α interactome of hormone-dependent human breast cancer cell nuclei.

FAM133B RSBN1 BRD2 RBBP6 RBMX2 NMT2 KTN1 HMGXB4 BRD9 BRD3 NKAP GPATCH8 SSRP1 MED1 IK CEP164 RSBN1L LARP7 SON

1.32e-121497571931527615
Pubmed

TBK1 phosphorylation activates LIR-dependent degradation of the inflammation repressor TNIP1.

FAM133B SRRM1 TCOF1 RBBP6 RBMX2 CHD5 BRD9 SMARCA4 DKC1 ZCCHC17 RP9 SSRP1 IK SREK1IP1 LRRFIP1 SON

1.70e-12949571636574265
Pubmed

Developmental epigenetic modification regulates stochastic expression of clustered protocadherin genes, generating single neuron diversity.

PCDHA9 PCDHA13 PCDHA8 PCDHA6 PCDHA3 PCDHA1

1.94e-122457624698270
Pubmed

Synthetic Lethal and Resistance Interactions with BET Bromodomain Inhibitors in Triple-Negative Breast Cancer.

RTF1 SRRM1 TAF3 BRD2 RBBP6 BRD4 BRD9 SMARCA4 DKC1 BRD3 GPATCH8 SSRP1 MED1 IK LARP7 SON

4.58e-121014571632416067
Pubmed

Interaction with protocadherin-gamma regulates the cell surface expression of protocadherin-alpha.

PCDHA9 PCDHA13 PCDHA8 PCDHA6 PCDHA3 PCDHA1

5.41e-122857615347688
Pubmed

ATG5 is required for B cell polarization and presentation of particulate antigens.

ARL6IP4 FAM133B CWF19L2 FAM133A RBBP6 RBMX2 KTN1 BRD9 CIR1 ZCCHC17 RP9 GPATCH8 MED1 IK

5.56e-12701571430196744
Pubmed

SETD1A Methyltransferase Is Physically and Functionally Linked to the DNA Damage Repair Protein RAD18.

ARL6IP4 FAM133B BRD2 RBBP6 RBMX2 SMARCA4 BRD3 NKAP SSRP1 IK

1.03e-11251571031076518
Pubmed

SNIP1 Recruits TET2 to Regulate c-MYC Target Genes and Cellular DNA Damage Response.

ARL6IP4 SRRM1 TCOF1 RBMX2 NKAP SSRP1 MED1 IK SON

4.04e-1025957930404004
Pubmed

Clustered gamma-protocadherins regulate cortical interneuron programmed cell death.

PCDHA9 PCDHA13 PCDHA8 PCDHA6 PCDHA3 PCDHA1

5.03e-105757632633719
Pubmed

The Brd4 extraterminal domain confers transcription activation independent of pTEFb by recruiting multiple proteins, including NSD3.

BRD2 BRD4 CHD5 BRD9 SMARCA4 BRD3

5.03e-105757621555454
Pubmed

CTCF Governs the Identity and Migration of MGE-Derived Cortical Interneurons.

PCDHA9 PCDHA13 PCDHA8 PCDHA6 PCDHA3 PCDHA1

5.60e-105857630377227
Pubmed

Nuclear actin interactome analysis links actin to KAT14 histone acetyl transferase and mRNA splicing.

RTF1 SRRM1 TCOF1 RBBP6 BRD4 SMARCA4 MED1 IK LARP7 LRRFIP1 SON

5.60e-10506571130890647
Pubmed

Mapping the Ku Interactome Using Proximity-Dependent Biotin Identification in Human Cells.

RTF1 RBBP6 BRD4 SMARCA4 SLU7 SSRP1 MED1 IK RSBN1L

8.81e-1028357930585729
Pubmed

Interactome Rewiring Following Pharmacological Targeting of BET Bromodomains.

SRRM1 TAF3 BRD2 BRD4 HMGXB4 BRD9 SMARCA4 DKC1 BRD3 SSRP1 MED1

9.65e-10533571130554943
Pubmed

SRCAP complex promotes lung cancer progression by reprograming the oncogenic transcription of Hippo-YAP/TAZ signaling pathway.

TAF3 TCOF1 RBBP6 BRD4 KTN1 SMARCA4 SSRP1 MED1 IK RSBN1L LRRFIP1

1.31e-09549571138280479
Pubmed

Comparative DNA sequence analysis of mouse and human protocadherin gene clusters.

PCDHA9 PCDHA13 PCDHA8 PCDHA6 PCDHA3 PCDHA1

1.50e-096857611230163
Pubmed

Diversity revealed by a novel family of cadherins expressed in neurons at a synaptic complex.

PCDHA9 PCDHA13 PCDHA8 PCDHA6

2.12e-09115749655502
Pubmed

A striking organization of a large family of human neural cadherin-like cell adhesion genes.

PCDHA9 PCDHA13 PCDHA8 PCDHA6 PCDHA3 PCDHA1

2.12e-097257610380929
Pubmed

Cadherin superfamily genes: functions, genomic organization, and neurologic diversity.

PCDHA9 PCDHA13 PCDHA8 PCDHA6 PCDHA3 PCDHA1

2.51e-097457610817752
Pubmed

Screen identifies bromodomain protein ZMYND8 in chromatin recognition of transcription-associated DNA damage that promotes homologous recombination.

BRD2 PHF20L1 BRD4 BRD9 SMARCA4 BRD3

2.73e-097557625593309
Pubmed

The DNA sequence and comparative analysis of human chromosome 5.

PCDHA9 PCDHA13 PCDHA8 PCDHA6 PCDHA3 PCDHA1

2.73e-097557615372022
Pubmed

Proteins of the CNR family are multiple receptors for Reelin.

PCDHA9 PCDHA13 PCDHA8 PCDHA6

3.18e-091257410612399
Pubmed

Phylogenetic analysis of the cadherin superfamily allows identification of six major subfamilies besides several solitary members.

PCDHA9 PCDHA13 PCDHA8 PCDHA6 PCDHA3 PCDHA1

3.20e-097757610835267
Pubmed

Large exons encoding multiple ectodomains are a characteristic feature of protocadherin genes.

PCDHA9 PCDHA13 PCDHA8 PCDHA6 PCDHA3 PCDHA1

4.04e-098057610716726
Pubmed

Bromo- and extraterminal domain chromatin regulators serve as cofactors for murine leukemia virus integration.

BRD2 BRD4 BRD3

4.17e-09357324049186
Pubmed

Comparative structure-function analysis of bromodomain and extraterminal motif (BET) proteins in a gene-complementation system.

BRD2 BRD4 BRD3

4.17e-09357331792058
Pubmed

BET Proteins Exhibit Transcriptional and Functional Opposition in the Epithelial-to-Mesenchymal Transition.

BRD2 BRD4 BRD3

4.17e-09357329437854
Pubmed

The mRNA-bound proteome and its global occupancy profile on protein-coding transcripts.

ARL6IP4 FAM133B SRRM1 TCOF1 RBBP6 ZCCHC17 RP9 NKAP GPATCH8 SSRP1 LARP7 SON

6.10e-09807571222681889
Pubmed

Intrinsic BET inhibitor resistance in SPOP-mutated prostate cancer is mediated by BET protein stabilization and AKT-mTORC1 activation.

SRRM1 BRD2 TCOF1 BRD4 BRD3

6.22e-094057528805822
Pubmed

Complementary proteomics strategies capture an ataxin-1 interactome in Neuro-2a cells.

ARL6IP4 SRRM1 BRD2 TCOF1 RBBP6 BRD4 SMARCA4 BRD3 RP9 NKAP GPATCH8

9.56e-09665571130457570
Pubmed

PIP30/FAM192A is a novel regulator of the nuclear proteasome activator PA28γ.

BRD9 SMARCA4 ZCCHC17 RP9 SREK1IP1

1.44e-084757529934401
Pubmed

The protein interaction landscape of the human CMGC kinase group.

RTF1 ARL6IP4 SRRM1 TCOF1 RBBP6 BRD3 NKAP GPATCH8 MED1 LARP7 SON

1.50e-08695571123602568
Pubmed

Regulation of NO synthesis, local inflammation, and innate immunity to pathogens by BET family proteins.

BRD2 BRD4 BRD3

1.67e-08457324248598
Pubmed

Expression of BET genes in testis of men with different spermatogenic impairments.

BRD2 BRD4 BRD3

1.67e-08457322035730
Pubmed

Selective inhibition of CD4+ T-cell cytokine production and autoimmunity by BET protein and c-Myc inhibitors.

BRD2 BRD4 BRD3

1.67e-08457322912406
Pubmed

Genome-wide association for abdominal subcutaneous and visceral adipose reveals a novel locus for visceral fat in women.

PCDHA9 ZNF608 PCDHA13 PCDHA8 PCDHA6 PCDHA3 PCDHA1

3.04e-0819357722589738
Pubmed

R2TP/Prefoldin-like component RUVBL1/RUVBL2 directly interacts with ZNHIT2 to regulate assembly of U5 small nuclear ribonucleoprotein.

SRRM1 BRD2 TCOF1 BRD4 DKC1 SLU7 BRD3 GPATCH8

3.20e-0830057828561026
Pubmed

Targeted and Interactome Proteomics Revealed the Role of PHD2 in Regulating BRD4 Proline Hydroxylation.

SRRM1 BRD2 TCOF1 BRD4 SMARCA4 DKC1 SSRP1 MED1 IK

4.10e-0844157931239290
Pubmed

A Genome-Wide CRISPR Screen Identifies Genes Critical for Resistance to FLT3 Inhibitor AC220.

PCDHA9 PCDHA13 PCDHA8 PCDHA6 PCDHA3 PCDHA1

4.45e-0811957628625976
Pubmed

CHD3 and CHD4 form distinct NuRD complexes with different yet overlapping functionality.

SRRM1 BRD2 TCOF1 CHD5 SMARCA4 DKC1 SLU7 SSRP1 IK LARP7

4.88e-08605571028977666
Pubmed

In-Depth In Vivo Crosslinking in Minutes by a Compact, Membrane-Permeable, and Alkynyl-Enrichable Crosslinker.

CYLC1 FAM133B SRRM1 BRD2 PHF20L1 ZNF608 FAM133A RBMX2 CHD5 KTN1 DKC1 BRD3 SSRP1 LARP7

6.02e-081442571435575683
Pubmed

Intron 1-Mediated Regulation of EGFR Expression in EGFR-Dependent Malignancies Is Mediated by AP-1 and BET Proteins.

BRD2 BRD4 BRD3

8.32e-08657331444232
Pubmed

A Y2H-seq approach defines the human protein methyltransferase interactome.

PHF20L1 LIAT1 BRD4 HMGXB4 SLU7 ZCCHC17 IK LARP7

8.75e-0834257823455924
Pubmed

Combinatorial targeting of a chromatin complex comprising Dot1L, menin and the tyrosine kinase BAZ1B reveals a new therapeutic vulnerability of endocrine therapy-resistant breast cancer.

SRRM1 TCOF1 RBBP6 KTN1 SMARCA4 DKC1 BRD3 SSRP1 IK LARP7 SON

1.11e-07847571135850772
Pubmed

RNA-binding proteins with basic-acidic dipeptide (BAD) domains self-assemble and aggregate in Alzheimer's disease.

ARL6IP4 SRRM1 RBBP6 DKC1 NKAP GPATCH8 IK RSBN1L LARP7 SON

2.23e-07713571029802200
Pubmed

BRD4 Promotes Gastric Cancer Progression and Metastasis through Acetylation-Dependent Stabilization of Snail.

BRD2 BRD4 BRD3

2.32e-07857331311807
Pubmed

Characterizing ZC3H18, a Multi-domain Protein at the Interface of RNA Production and Destruction Decisions.

ARL6IP4 SRRM1 TCOF1 RBBP6 RBMX2 DKC1 NKAP SSRP1 IK SON

2.80e-07731571029298432
Pubmed

Spatiotemporal-resolved protein networks profiling with photoactivation dependent proximity labeling.

SRRM1 BRD2 TCOF1 RBBP6 BRD4 GPATCH8 MED1 SON

2.83e-0739957835987950
Pubmed

Unbiased Identification of trans Regulators of ADAR and A-to-I RNA Editing.

CWF19L2 TCOF1 CHD5 KTN1 SMARCA4 SSRP1 MED1

3.06e-0727157732433965
Pubmed

Histone-binding of DPF2 mediates its repressive role in myeloid differentiation.

FAM133A HMGXB4 BRD9 SMARCA4 GPATCH8 MED1 LARP7

4.10e-0728357728533407
Pubmed

MYC multimers shield stalled replication forks from RNA polymerase.

RTF1 BRD2 TCOF1 USP42 SMARCA4 DKC1 GPATCH8 SSRP1 IK RSBN1L SON

5.19e-07989571136424410
Pubmed

Prostate cancer-associated SPOP mutations confer resistance to BET inhibitors through stabilization of BRD4.

BRD2 BRD4 BRD3

6.82e-071157328805820
Pubmed

Proteomic analysis of HIV-1 Gag interacting partners using proximity-dependent biotinylation.

RSBN1 TCOF1 RSBN1L SON

6.93e-074257426362536
Pubmed

The E3 ubiquitin ligase UBR5 interacts with the H/ACA ribonucleoprotein complex and regulates ribosomal RNA biogenesis in embryonic stem cells.

SRRM1 HMGXB4 DKC1 ZCCHC17 SON

8.03e-0710457531365120
Pubmed

A protein interaction landscape of breast cancer.

SRRM1 TCOF1 FAM133A BRD9 SMARCA4 DKC1 GPATCH8 SSRP1 LARP7

8.67e-0763457934591612
Pubmed

The protein network surrounding the human telomere repeat binding factors TRF1, TRF2, and POT1.

BRD2 TCOF1 DKC1 GPATCH8 RSBN1L LARP7

8.73e-0719757620811636
Pubmed

Dynamic Protein Interactions of the Polycomb Repressive Complex 2 during Differentiation of Pluripotent Cells.

TAF3 BRD2 USP42 RBBP6 BRD4 SMARCA4 BRD3 SSRP1

9.54e-0746957827634302
Pubmed

Folate receptor α increases chemotherapy resistance through stabilizing MDM2 in cooperation with PHB2 that is overcome by MORAb-202 in gastric cancer.

ARL6IP4 TCOF1 FAM133A RBBP6 ZCCHC17 RP9

1.13e-0620657634185411
Pubmed

MYC Protein Interactome Profiling Reveals Functionally Distinct Regions that Cooperate to Drive Tumorigenesis.

BRD2 BRD4 SMARCA4 DKC1 SLU7 SSRP1 IK

1.37e-0633957730415952
Pubmed

DNA polymerase POLD1 promotes proliferation and metastasis of bladder cancer by stabilizing MYC.

TAF3 USP42 SLU7 RP9 NKAP

1.50e-0611857537105989
Pubmed

Comprehensive Interactome Mapping of the DNA Repair Scaffold SLX4 Using Proximity Labeling and Affinity Purification.

CWF19L2 BRD2 BRD4 SMARCA4 SLU7 IK

1.75e-0622257637071664
Pubmed

Jade-1S phosphorylation induced by CK1α contributes to cell cycle progression.

PHF20L1 HMGXB4 GPATCH8 CWC25

2.23e-065657426919559
Pubmed

KSHV episome tethering sites on host chromosomes and regulation of latency-lytic switch by CHD4.

RTF1 BRD4 SLU7 IK SON

2.42e-0613057535545047
Pubmed

Matrix-screening reveals a vast potential for direct protein-protein interactions among RNA binding proteins.

USP42 RBBP6 SRRM4 BRD4 SLU7 ZCCHC17 SSRP1 MED1 LARP7

2.55e-0672357934133714
Pubmed

BRD3 and BRD4 BET Bromodomain Proteins Differentially Regulate Skeletal Myogenesis.

BRD4 BRD3

2.64e-06257228733670
Pubmed

Intron-less processed Pcdhalpha genes in the central nervous system.

PCDHA8 PCDHA6

2.64e-06257214697259
Pubmed

BET bromodomain proteins mediate downstream signaling events following growth factor stimulation in human lung fibroblasts and are involved in bleomycin-induced pulmonary fibrosis.

BRD2 BRD4

2.64e-06257223115324
Pubmed

Bromodomain and extra-terminal domain bromodomain inhibition prevents synovial inflammation via blocking IκB kinase-dependent NF-κB activation in rheumatoid fibroblast-like synoviocytes.

BRD2 BRD4

2.64e-06257226324948
Pubmed

Roles of the BRD4 short isoform in phase separation and active gene transcription.

BRD4 MED1

2.64e-06257232203489
Pubmed

The double bromodomain proteins Brd2 and Brd3 couple histone acetylation to transcription.

BRD2 BRD3

2.64e-06257218406326
Pubmed

Viral E protein neutralizes BET protein-mediated post-entry antagonism of SARS-CoV-2.

BRD2 BRD4

2.64e-06257235839775
Pubmed

Brd4-Brd2 isoform switching coordinates pluripotent exit and Smad2-dependent lineage specification.

BRD2 BRD4

2.64e-06257228588073
Pubmed

Bromodomain and extra-terminal domain (BET) proteins regulate melanocyte differentiation.

BRD2 BRD4

2.64e-06257232151278
Pubmed

Recruitment of Brd3 and Brd4 to acetylated chromatin is essential for proinflammatory cytokine-induced matrix-degrading enzyme expression.

BRD4 BRD3

2.64e-06257230786900
Pubmed

BET bromodomain-targeting compounds reactivate HIV from latency via a Tat-independent mechanism.

BRD2 BRD4

2.64e-06257223255218
Pubmed

Kaposi's sarcoma-associated herpesvirus latency-associated nuclear antigen interacts with bromodomain protein Brd4 on host mitotic chromosomes.

BRD2 BRD4

2.64e-06257216940503
Pubmed

BRD3/4 inhibition and FLT3-ligand deprivation target pathways that are essential for the survival of human MLL-AF9+ leukemic cells.

BRD4 BRD3

2.64e-06257229240787
Pubmed

A structural basis for BRD2/4-mediated host chromatin interaction and oligomer assembly of Kaposi sarcoma-associated herpesvirus and murine gammaherpesvirus LANA proteins.

BRD2 BRD4

2.64e-06257224146614
Pubmed

WHAT do viruses BET on?

BRD2 BRD4

2.64e-06257220036832
Pubmed

SARS-CoV-2 E protein interacts with BRD2 and BRD4 SEED domains and alters transcription in a different way than BET inhibition.

BRD2 BRD4

2.64e-06257239066826
Pubmed

BRD9 regulates interferon-stimulated genes during macrophage activation via cooperation with BET protein BRD4.

BRD4 BRD9

2.64e-06257234983841
Pubmed

Chromosomal localization, gene structure and transcription pattern of the ORFX gene, a homologue of the MHC-linked RING3 gene.

BRD2 BRD3

2.64e-0625729373153
Pubmed

WDR76 Co-Localizes with Heterochromatin Related Proteins and Rapidly Responds to DNA Damage.

SRRM1 BRD2 BRD4 DKC1 BRD3 SSRP1 MED1

3.69e-0639457727248496
Pubmed

Histone crosstalk between H3S10ph and H4K16ac generates a histone code that mediates transcription elongation.

BRD2 BRD4 MED1

3.97e-061957319766566
Pubmed

HIV-1 Vpr induces cell cycle arrest and enhances viral gene expression by depleting CCDC137.

TCOF1 RBMX2 BRD4 DKC1 SON

4.57e-0614857532538781
Pubmed

Transcription factor protein interactomes reveal genetic determinants in heart disease.

BRD2 BRD4 BRD9 SMARCA4 MED1 IK SON

4.86e-0641157735182466
InteractionJMJD6 interactions

ARL6IP4 BRD2 USP42 FAM133A LIAT1 RBMX2 BRD4 HMGXB4 BRD9 DKC1 SLU7 ZCCHC17 RP9 NKAP SSRP1 LARP7 SON

6.67e-212055717int:JMJD6
InteractionDDX23 interactions

RTF1 RSBN1 SRRM1 CWF19L2 TAF3 BRD2 TCOF1 RBBP6 RBMX2 BRD4 DKC1 SLU7 RP9 NKAP GPATCH8 SSRP1 IK CWC25 CEP164 RSBN1L LARP7

5.15e-204805721int:DDX23
InteractionBRD2 interactions

RTF1 RSBN1 SRRM1 TAF3 BRD2 BRD4 NMT2 HMGXB4 BRD9 SMARCA4 DKC1 BRD3 NKAP SSRP1 MED1 RSBN1L LARP7

1.77e-154295717int:BRD2
InteractionSNRNP40 interactions

RSBN1 SRRM1 CWF19L2 PHF20L1 ZNF608 TCOF1 USP42 RBBP6 BRD4 SMARCA4 DKC1 SLU7 RP9 GPATCH8 SSRP1 IK RSBN1L LARP7 SON

4.99e-156375719int:SNRNP40
InteractionBRD3 interactions

ARL6IP4 RSBN1 SRRM1 TAF3 BRD2 RBBP6 BRD4 HMGXB4 BRD9 SMARCA4 BRD3 NKAP SSRP1 MED1 RSBN1L LARP7 SON

1.79e-144945717int:BRD3
InteractionZCCHC10 interactions

RSBN1 SRRM1 TAF3 USP42 RBBP6 HMGXB4 BRD9 SLU7 ZCCHC17 NKAP IK RSBN1L SON

8.68e-142365713int:ZCCHC10
InteractionPOLR1G interactions

RTF1 RSBN1 CWF19L2 TAF3 BRD2 TCOF1 RBMX2 BRD4 SMARCA4 DKC1 SLU7 BRD3 SSRP1 IK RSBN1L LARP7

2.63e-134895716int:POLR1G
InteractionRNPS1 interactions

RSBN1 SRRM1 USP42 RBBP6 SRRM4 BRD9 ZCCHC17 BRD3 NKAP GPATCH8 SSRP1 IK CEP164 RSBN1L SON

5.58e-134255715int:RNPS1
InteractionDHX8 interactions

RTF1 RSBN1 SRRM1 CWF19L2 RBBP6 RBMX2 SLU7 NKAP GPATCH8 IK CWC25 RSBN1L SON

1.32e-122925713int:DHX8
InteractionSMC5 interactions

RSBN1 SRRM1 CWF19L2 TAF3 BRD2 RBBP6 BRD4 KTN1 HMGXB4 BRD9 SMARCA4 DKC1 SLU7 RP9 SSRP1 MED1 IK CWC25 RSBN1L SON

1.43e-1210005720int:SMC5
InteractionPNN interactions

RSBN1 SRRM1 BRD2 FAM133A RBBP6 RBMX2 BRD4 BRD9 ZCCHC17 BRD3 NKAP SSRP1 RSBN1L

2.02e-123025713int:PNN
InteractionSNIP1 interactions

RTF1 ARL6IP4 SRRM1 BRD2 TCOF1 RBMX2 SRRM4 SMARCA4 BRD3 NKAP GPATCH8 SSRP1 IK SON

7.27e-124175714int:SNIP1
InteractionCSNK2A2 interactions

RTF1 ARL6IP4 SRRM1 BRD2 TCOF1 FAM133A BRD4 NMT2 SMARCA4 ZCCHC17 BRD3 RP9 NKAP SSRP1 NKAPL SREK1IP1 LARP7

7.33e-127185717int:CSNK2A2
InteractionNUP43 interactions

RTF1 ARL6IP4 RSBN1 SRRM1 TAF3 PHF20L1 ZNF608 RBBP6 RBMX2 SMARCA4 DKC1 NKAP GPATCH8 SSRP1 LARP7 SON

1.08e-116255716int:NUP43
InteractionMECP2 interactions

SRRM1 CWF19L2 TAF3 BRD2 TCOF1 USP42 RBBP6 RBMX2 BRD4 HMGXB4 SMARCA4 DKC1 ZCCHC17 PCDHA1 BRD3 GPATCH8 SSRP1 MED1 IK NKAPL SON

1.61e-1112875721int:MECP2
InteractionCBX3 interactions

RTF1 RSBN1 SRRM1 CWF19L2 BRD2 TCOF1 RBBP6 BRD4 CHD5 HMGXB4 SMARCA4 BRD3 RP9 SSRP1 MED1 RSBN1L

1.76e-116465716int:CBX3
InteractionZNF330 interactions

RTF1 CWF19L2 TAF3 BRD2 HMGXB4 SMARCA4 DKC1 SLU7 BRD3 GPATCH8 SSRP1 IK RSBN1L LARP7

1.78e-114465714int:ZNF330
InteractionSRRM2 interactions

RTF1 SRRM1 USP42 RBBP6 BRD9 SMARCA4 SLU7 ZCCHC17 BRD3 NKAP SSRP1 SREK1IP1 RSBN1L SON

2.85e-114625714int:SRRM2
InteractionMYCN interactions

ARL6IP4 FAM133B SRRM1 TCOF1 RBBP6 RBMX2 KTN1 HMGXB4 BRD9 SMARCA4 DKC1 ZCCHC17 RP9 NKAP GPATCH8 SSRP1 IK CWC25 SREK1IP1 LARP7 SON

5.40e-1113735721int:MYCN
InteractionCSNK2A1 interactions

RTF1 ARL6IP4 SRRM1 BRD2 TCOF1 FAM133A BRD4 NMT2 BRD9 SMARCA4 DKC1 ZCCHC17 BRD3 RP9 NKAP SSRP1 SREK1IP1 LARP7

6.79e-119565718int:CSNK2A1
InteractionCSNK2B interactions

SRRM1 CWF19L2 BRD2 TCOF1 FAM133A RBMX2 BRD4 NMT2 ZCCHC17 BRD3 RP9 NKAP SSRP1 SREK1IP1 LARP7

1.32e-106255715int:CSNK2B
InteractionNIFK interactions

RTF1 SRRM1 TAF3 BRD2 TCOF1 RBBP6 RBMX2 BRD4 DKC1 BRD3 RP9 IK LARP7

1.70e-104315713int:NIFK
InteractionNOP56 interactions

RTF1 CWF19L2 BRD2 TCOF1 RBMX2 BRD4 SMARCA4 DKC1 BRD3 RP9 NKAP SSRP1 CWC25 LARP7

4.50e-105705714int:NOP56
InteractionCHD4 interactions

SRRM1 BRD2 PHF20L1 TCOF1 RBBP6 BRD4 CHD5 HMGXB4 SMARCA4 DKC1 SLU7 BRD3 GPATCH8 SSRP1 IK LARP7 LRRFIP1

4.71e-109385717int:CHD4
InteractionNR2C2 interactions

ARL6IP4 FAM133B RSBN1 SRRM1 TAF3 TCOF1 USP42 RBBP6 RBMX2 BRD9 SMARCA4 DKC1 ZCCHC17 RP9 NKAP SSRP1 SREK1IP1 RSBN1L LARP7 SON

6.27e-1014035720int:NR2C2
InteractionNKAPD1 interactions

ARL6IP4 SRRM1 FAM133A HMGXB4 RP9 NKAP IK NKAPL SREK1IP1

6.86e-10161579int:NKAPD1
InteractionHECTD1 interactions

ARL6IP4 FAM133B RSBN1 FAM133A RBBP6 KTN1 SMARCA4 DKC1 SLU7 ZCCHC17 NKAP SSRP1 MED1 IK LARP7 LRRFIP1 SON

9.78e-109845717int:HECTD1
InteractionNOS1AP interactions

BRD2 FAM133A BRD4 ZCCHC17 BRD3 RP9 NKAP SREK1IP1

9.99e-10113578int:NOS1AP
InteractionSNRPC interactions

ARL6IP4 SRRM1 RBBP6 BRD4 DKC1 SLU7 NKAP GPATCH8 SSRP1 IK LARP7 SON

2.94e-094405712int:SNRPC
InteractionNKAP interactions

BRD2 RBMX2 ZCCHC17 BRD3 NKAP NKAPL SREK1IP1 RSBN1L

3.45e-09132578int:NKAP
InteractionPCDHA10 interactions

PCDHA9 PCDHA13 PCDHA8 PCDHA6 PCDHA3

3.84e-0922575int:PCDHA10
InteractionSSRP1 interactions

RTF1 ARL6IP4 SRRM1 BRD2 RBBP6 BRD4 HMGXB4 SMARCA4 DKC1 BRD3 SSRP1 CEP164 LARP7 SON

4.79e-096855714int:SSRP1
InteractionLYAR interactions

RSBN1 BRD2 PHF20L1 BRD4 DKC1 BRD3 NKAP SSRP1 SREK1IP1 RSBN1L LARP7

6.49e-093735711int:LYAR
InteractionMACROH2A2 interactions

RSBN1 BRD2 FAM133A BRD4 DKC1 ZCCHC17 BRD3 SSRP1 LARP7

7.42e-09211579int:MACROH2A2
InteractionC1orf226 interactions

BRD2 FAM133A BRD4 BRD3 RP9 NKAP

8.09e-0953576int:C1orf226
InteractionSRPK2 interactions

RTF1 ARL6IP4 SRRM1 TCOF1 RBBP6 RBMX2 HMGXB4 DKC1 ZCCHC17 BRD3 NKAP GPATCH8 LARP7 SON

8.55e-097175714int:SRPK2
InteractionMBD3 interactions

BRD2 PHF20L1 BRD4 CHD5 HMGXB4 SMARCA4 BRD3 SSRP1 IK LARP7

9.13e-092955710int:MBD3
InteractionSAP18 interactions

SRRM1 BRD2 RBBP6 BRD4 SMARCA4 BRD3 GPATCH8 SSRP1 IK SON

1.25e-083055710int:SAP18
InteractionNOLC1 interactions

SRRM1 BRD2 TCOF1 BRD4 BRD9 DKC1 BRD3 SSRP1 IK LARP7

2.29e-083255710int:NOLC1
InteractionGATAD2B interactions

BRD2 PHF20L1 BRD4 CHD5 HMGXB4 SMARCA4 BRD3 CWC25 LARP7

2.71e-08245579int:GATAD2B
InteractionDHX40 interactions

RTF1 CWF19L2 BRD2 RBBP6 BRD4 KTN1 GPATCH8 IK CWC25

3.12e-08249579int:DHX40
InteractionTERF2IP interactions

RTF1 CWF19L2 ZNF608 RBBP6 BRD4 HMGXB4 SMARCA4 SLU7 SSRP1 MED1 IK LARP7

3.64e-085525712int:TERF2IP
InteractionSUPT16H interactions

RTF1 SRRM1 BRD2 BRD4 SMARCA4 DKC1 BRD3 SSRP1 MED1 IK CEP164

3.71e-084425711int:SUPT16H
InteractionPCDHA3 interactions

PCDHA9 PCDHA8 PCDHA6 PCDHA3 PCDHA1

3.95e-0834575int:PCDHA3
InteractionPRPF40A interactions

SRRM1 FAM133A RBMX2 BRD4 SMARCA4 BRD3 NKAP SSRP1 SREK1IP1 LARP7 SON

4.07e-084465711int:PRPF40A
InteractionRPL31 interactions

RTF1 RSBN1 TAF3 BRD2 TCOF1 BRD4 DKC1 SLU7 BRD3 RP9 IK RSBN1L LARP7

4.09e-086805713int:RPL31
InteractionCDK11B interactions

RTF1 RSBN1 BRD4 NMT2 NKAP GPATCH8 IK LARP7

4.48e-08183578int:CDK11B
InteractionRAD18 interactions

ARL6IP4 FAM133B BRD2 RBBP6 RBMX2 BRD4 SMARCA4 BRD3 NKAP SSRP1 IK

5.21e-084575711int:RAD18
InteractionZMYND8 interactions

BRD2 PHF20L1 BRD4 CHD5 SMARCA4 ZCCHC17 BRD3 SSRP1

6.24e-08191578int:ZMYND8
InteractionH2AJ interactions

RTF1 RBBP6 ZCCHC17 RP9 SSRP1 CWC25 LARP7

6.80e-08127577int:H2AJ
InteractionPHIP interactions

TAF3 BRD2 ZNF608 BRD4 CHD5 SMARCA4 BRD3 SSRP1

7.93e-08197578int:PHIP
InteractionMEN1 interactions

RSBN1 SRRM1 PHF20 PHF20L1 ZNF608 TCOF1 RBBP6 KTN1 SMARCA4 DKC1 SSRP1 MED1 IK RSBN1L SON

1.11e-0710295715int:MEN1
InteractionH3C3 interactions

SRRM1 BRD2 RBMX2 BRD4 CHD5 HMGXB4 BRD9 SMARCA4 BRD3 SSRP1 MED1

1.17e-074955711int:H3C3
InteractionPRPF3 interactions

SRRM1 BRD2 BRD4 SLU7 BRD3 NKAP SSRP1 LARP7 SON

1.18e-07291579int:PRPF3
InteractionH3-3A interactions

TAF3 BRD2 PHF20L1 BRD4 CHD5 HMGXB4 BRD9 SMARCA4 BRD3 GPATCH8 SSRP1 MED1 LRRFIP1

1.26e-077495713int:H3-3A
InteractionSRSF6 interactions

RSBN1 SRRM1 RBBP6 BRD4 DKC1 ZCCHC17 GPATCH8 SSRP1 RSBN1L LARP7 SON

1.37e-075035711int:SRSF6
InteractionSRSF4 interactions

SRRM1 USP42 RBBP6 SRRM4 DKC1 GPATCH8 RSBN1L LARP7 SON

1.53e-07300579int:SRSF4
InteractionTNIP1 interactions

FAM133B SRRM1 TCOF1 RBBP6 RBMX2 CHD5 BRD9 SMARCA4 DKC1 ZCCHC17 RP9 SSRP1 IK SREK1IP1 LRRFIP1 SON

1.56e-0712175716int:TNIP1
InteractionPIP4K2A interactions

RTF1 ARL6IP4 BRD2 TCOF1 BRD4 BRD3 NKAP GPATCH8

1.61e-07216578int:PIP4K2A
InteractionRPL11 interactions

RSBN1 CWF19L2 TCOF1 USP42 RBMX2 BRD4 KTN1 DKC1 ZCCHC17 SSRP1 RSBN1L LARP7

2.22e-076525712int:RPL11
InteractionCOIL interactions

RTF1 RSBN1 CWF19L2 BRD2 DKC1 SLU7 BRD3 SSRP1 IK RSBN1L LARP7

3.47e-075525711int:COIL
InteractionAKAP17A interactions

BRD2 SRRM4 KTN1 HMGXB4 BRD3 NKAP

3.57e-0799576int:AKAP17A
InteractionHMGN4 interactions

RSBN1 BRD2 BRD4 DKC1 BRD3 SSRP1

3.79e-07100576int:HMGN4
InteractionSNRNP70 interactions

ARL6IP4 SRRM1 RBBP6 SRRM4 BRD4 SMARCA4 DKC1 NKAP GPATCH8 SSRP1 IK RSBN1L LARP7 SON

4.30e-079845714int:SNRNP70
InteractionACTC1 interactions

RTF1 SRRM1 TCOF1 RBBP6 BRD4 BRD9 SMARCA4 MED1 IK LARP7 LRRFIP1 SON

4.32e-076945712int:ACTC1
InteractionTOP1 interactions

ARL6IP4 SRRM1 BRD2 TCOF1 RBBP6 BRD4 SMARCA4 BRD3 SSRP1 IK LARP7 SON

4.45e-076965712int:TOP1
InteractionPARP1 interactions

RTF1 ARL6IP4 RSBN1 SRRM1 CWF19L2 TAF3 BRD2 BRD4 SMARCA4 DKC1 SLU7 BRD3 SSRP1 MED1 RSBN1L LARP7

4.49e-0713165716int:PARP1
InteractionPCDHA8 interactions

PCDHA13 PCDHA8 PCDHA6 PCDHA3 PCDHA1

4.72e-0755575int:PCDHA8
InteractionZC3H14 interactions

ARL6IP4 SRRM1 BRD4 ZCCHC17 RP9 NKAP SSRP1

4.78e-07169577int:ZC3H14
InteractionH2BC8 interactions

RTF1 ARL6IP4 BRD2 BRD4 HMGXB4 SMARCA4 SLU7 BRD3 RP9 SSRP1 IK

5.29e-075765711int:H2BC8
InteractionMTA3 interactions

BRD2 PHF20L1 BRD4 CHD5 HMGXB4 BRD3 SSRP1

5.60e-07173577int:MTA3
InteractionNKAPL interactions

ARL6IP4 NKAP NKAPL SREK1IP1

5.86e-0724574int:NKAPL
InteractionZC3H18 interactions

RTF1 ARL6IP4 RSBN1 SRRM1 TCOF1 RBBP6 RBMX2 BRD4 DKC1 NKAP SSRP1 IK SON

7.60e-078775713int:ZC3H18
InteractionHMGXB4 interactions

BRD2 BRD4 CHD5 HMGXB4 BRD3 SSRP1

7.82e-07113576int:HMGXB4
InteractionTOP2B interactions

SRRM1 BRD2 BRD4 SMARCA4 BRD3 SSRP1 IK CEP164

7.83e-07266578int:TOP2B
InteractionRPL5 interactions

RSBN1 CWF19L2 TCOF1 RBMX2 BRD4 KTN1 DKC1 SSRP1 RSBN1L LARP7 SON

8.72e-076065711int:RPL5
InteractionSNRPA interactions

ARL6IP4 SRRM1 RBBP6 BRD4 SLU7 NKAP SSRP1 IK LARP7 SON

8.80e-074825710int:SNRPA
InteractionBRD9 interactions

BRD2 TCOF1 BRD4 BRD9 SMARCA4 BRD3

9.59e-07117576int:BRD9
InteractionNSD3 interactions

BRD2 BRD4 BRD9 SMARCA4 SLU7 BRD3

9.59e-07117576int:NSD3
InteractionADARB1 interactions

RSBN1 CWF19L2 TCOF1 CHD5 SMARCA4 DKC1 ZCCHC17 SSRP1 MED1 RSBN1L

1.00e-064895710int:ADARB1
InteractionCAMKV interactions

BRD2 TCOF1 BRD4 DKC1 BRD3 GPATCH8

1.01e-06118576int:CAMKV
InteractionH3C1 interactions

RSBN1 TAF3 BRD2 PHF20 BRD4 HMGXB4 SMARCA4 DKC1 BRD3 SSRP1 IK RSBN1L LARP7

1.03e-069015713int:H3C1
InteractionCHD8 interactions

BRD2 PHF20 BRD4 DKC1 BRD3 NKAP LARP7

1.17e-06193577int:CHD8
InteractionBICRA interactions

BRD2 BRD4 BRD9 SMARCA4 BRD3

1.28e-0667575int:BICRA
InteractionH4C6 interactions

BRD4 SMARCA4 BRD3 SSRP1 LARP7

1.48e-0669575int:H4C6
InteractionCEBPB interactions

RTF1 ARL6IP4 SRRM1 BRD2 TCOF1 BRD4 KTN1 SMARCA4 DKC1 RP9 NKAP GPATCH8 SSRP1 MED1 IK SON

1.53e-0614435716int:CEBPB
InteractionSRSF11 interactions

ARL6IP4 SRRM1 SRRM4 BRD4 GPATCH8 IK SON

1.64e-06203577int:SRSF11
InteractionPCDHA6 interactions

PCDHA8 PCDHA6 PCDHA3

1.78e-069573int:PCDHA6
InteractionPCDHA1 interactions

PCDHA8 PCDHA3 PCDHA1

1.78e-069573int:PCDHA1
InteractionACIN1 interactions

SRRM1 BRD2 RBBP6 BRD4 BRD3 NKAP SSRP1 SON

1.98e-06301578int:ACIN1
InteractionC1orf35 interactions

ARL6IP4 BRD2 FAM133A RBMX2 SRRM4 BRD4 BRD3 RP9

2.13e-06304578int:C1orf35
InteractionPHF2 interactions

BRD2 BRD4 BRD3 SSRP1 LARP7

2.73e-0678575int:PHF2
InteractionPURG interactions

RSBN1 SRRM1 RBBP6 RBMX2 DKC1 RSBN1L LARP7

3.06e-06223577int:PURG
InteractionGATAD2A interactions

BRD2 PHF20L1 BRD4 CHD5 HMGXB4 BRD3 SSRP1

3.15e-06224577int:GATAD2A
InteractionH2BC21 interactions

RTF1 CYLC1 CWF19L2 BRD2 USP42 BRD4 HMGXB4 SMARCA4 SLU7 SSRP1 LARP7

3.34e-066965711int:H2BC21
InteractionSRRM4 interactions

ARL6IP4 SRRM1 RBMX2 SRRM4

3.54e-0637574int:SRRM4
InteractionSRSF1 interactions

RSBN1 SRRM1 RBMX2 BRD4 CIR1 DKC1 BRD3 IK LARP7 SON

3.95e-065705710int:SRSF1
InteractionUBTF interactions

RTF1 RSBN1 BRD2 TCOF1 BRD4 BRD3 LARP7

4.20e-06234577int:UBTF
InteractionSPDYE7P interactions

BRD2 BRD4 BRD3

4.63e-0612573int:SPDYE7P
InteractionU2AF1 interactions

SRRM4 CIR1 RP9 NKAP IK LARP7 SON

4.82e-06239577int:U2AF1
Cytoband5q31

PCDHA9 PCDHA13 PCDHA8 PCDHA6 PCDHA3 PCDHA1

7.08e-091155765q31
CytobandEnsembl 112 genes in cytogenetic band chr5q31

PCDHA9 PCDHA13 PCDHA8 PCDHA6 PCDHA3 PCDHA1 IK

9.06e-08298577chr5q31
GeneFamilyClustered protocadherins

PCDHA9 PCDHA13 PCDHA8 PCDHA6 PCDHA3 PCDHA1

2.60e-106425620
GeneFamilyPHD finger proteins

TAF3 PHF20 PHF20L1 CHD5

6.70e-069025488
GeneFamilyG-patch domain containing|Minor histocompatibility antigens

GPATCH8 SON

4.17e-0422252579
GeneFamilyTudor domain containing

PHF20 PHF20L1

1.19e-0337252780
GeneFamilyRNA binding motif containing

RBMX2 LARP7

3.47e-02213252725
CoexpressionGSE12963_ENV_NEF_VS_ENV_NEF_AND_VPR_DEFICIENT_HIV1_INF_CD4_TCELL_UP

CYLC1 PHF20 IQCA1 CWC25 NKAPL CNGA1

4.67e-07134576M455
CoexpressionNAKAYA_PBMC_FLUMIST_AGE_18_50YO_3DY_DN

RSBN1 CWF19L2 PHF20L1 USP42 RBBP6 HMGXB4 CIR1 CWC25 LRRFIP1 SON

1.86e-066805710M41089
CoexpressionTABULA_MURIS_SENIS_LIVER_ENDOTHELIAL_CELL_OF_HEPATIC_SINUSOID_AGEING

RTF1 BRD2 PHF20L1 KTN1 BRD9 SLU7 BRD3 IK

3.26e-06418578MM3752
CoexpressionWELCSH_BRCA1_TARGETS_DN

BRD2 TCOF1 SMARCA4 SSRP1 SON

1.40e-05141575M2428
CoexpressionMIKKELSEN_MEF_HCP_WITH_H3_UNMETHYLATED

PCDHA9 PCDHA13 PCDHA8 PCDHA6 PCDHA3 PCDHA1

2.18e-05261576MM1277
CoexpressionTABULA_MURIS_SENIS_SPLEEN_PROERYTHROBLAST_AGEING

RTF1 ARL6IP4 FAM133B SRRM1 TCOF1 FAM133A ZCCHC17 RP9 SSRP1 IK SON

3.04e-0511445711MM3843
CoexpressionGSE6269_FLU_VS_STREP_PNEUMO_INF_PBMC_UP

BRD2 SMARCA4 GPATCH8 MED1 SON

3.45e-05170575M5657
CoexpressionGSE11961_FOLLICULAR_BCELL_VS_PLASMA_CELL_DAY7_DN

RTF1 PHF20 TCOF1 HMGXB4 BRD9

7.46e-05200575M9315
CoexpressionSTONER_ESOPHAGEAL_CARCINOGENESIS_DN

SRRM1 RBBP6

9.69e-057572M1444
CoexpressionAtlasfacebase_RNAseq_e10.5_Emin_LatNas_2500_K3

RSBN1 SRRM1 CWF19L2 PHF20 TCOF1 USP42 RBBP6 RBMX2 BRD4 KTN1 DKC1 ZCCHC17 SREK1IP1 LARP7

4.21e-0612575714facebase_RNAseq_e10.5_Emin_LatNas_2500_K3
CoexpressionAtlasfacebase_RNAseq_e10.5_Emin_LatNas_2500

RSBN1 SRRM1 CWF19L2 PHF20 TCOF1 USP42 RBBP6 RBMX2 BRD4 KTN1 DKC1 ZCCHC17 SREK1IP1 LARP7

2.29e-0514595714facebase_RNAseq_e10.5_Emin_LatNas_2500
CoexpressionAtlasFacebaseRNAseq_e10.5_Neural Epithelium Overlying Medial Eminence_top-relative-expression-ranked_2500_k-means-cluster#4

SRRM1 TAF3 PHF20 USP42 CIR1 SLU7 GPATCH8 SSRP1 SON

2.72e-05595579Facebase_RNAseq_e10.5_Neural Epithelium Overlying Medial Eminence_2500_K4
CoexpressionAtlasDevelopingGonad_e12.5_epididymis_emap-29139_top-relative-expression-ranked_1000

SRRM1 BRD2 PHF20 PHF20L1 NMT2 HMGXB4 SMARCA4 DKC1 CNGA1 LARP7

5.03e-058065710gudmap_developingGonad_e12.5_epididymis_1000
CoexpressionAtlasFacebaseRNAseq_e9.5_Mandibular Arch_top-relative-expression-ranked_2500_k-means-cluster#2

RTF1 SRRM1 TAF3 USP42 CIR1 SLU7 ZCCHC17 SREK1IP1

1.24e-04564578Facebase_RNAseq_e9.5_Mandibular Arch_2500_K2
CoexpressionAtlasfacebase_RNAseq_e8.5_FloorPlate_2500_K3

SRRM1 CWF19L2 PHF20 ZNF608 TCOF1 RBMX2 BRD4 KTN1 DKC1 GPATCH8 LARP7 LRRFIP1

2.34e-0413715712facebase_RNAseq_e8.5_FloorPlate_2500_K3
CoexpressionAtlasFacebaseRNAseq_e10.5_Maxillary Arch_top-relative-expression-ranked_2500_k-means-cluster#5

SRRM1 TAF3 USP42 KTN1 CIR1 SLU7 SREK1IP1 SON

2.60e-04629578Facebase_RNAseq_e10.5_Maxillary Arch_2500_K5
ToppCellH1299-infected-SARSCoV2|infected / Cell line, Condition and Strain

RTF1 CWF19L2 TAF3 RBBP6 BRD9 CIR1 CEP164 LARP7

1.61e-101975780fa3e4cf93e77d78b1f97b906c5b13ca741ae17e
ToppCelldroplet-Tongue-nan|Tongue / Tongue_Heart_Limb_Muscle_Aorta_Diaphragm - method, tissue, subtissue, age, lineage, cell ontology and free annotation

RTF1 SRRM1 BRD2 BRD4 KIAA0040 LRRFIP1 SON

4.41e-09188577d62cc37e86b7b186e53aeb7f421c4e5ee28f23bd
ToppCell(11)_FOXN4+-(2)_GFP_FOXI1|(11)_FOXN4+ / shred by cell type by condition

RTF1 SRRM1 TAF3 RBBP6 BRD4 NKAP LRRFIP1

6.31e-0919857776d40b8c2f8399725b3a62ee2ae0896559cf91eb
ToppCell(01)_IL1RL1+-(2)_GFP_FOXI1|(01)_IL1RL1+ / shred by cell type by condition

RTF1 SRRM1 RBBP6 BRD4 KTN1 MED1 LARP7

6.53e-09199577a2f7d0cabf35b80fe239fae34a77bf9344d5d743
ToppCellCOVID-19_Convalescent-PLT_4|World / Disease Group and Platelet Clusters

RSBN1 CIR1 KIAA0040 SREK1IP1 RSBN1L LARP7

1.40e-071865765954a1e3ffafb33f2a9bc87af3343f304fda4c92
ToppCelldroplet-Bladder-nan|Bladder / Skin_Bladder_Kidney_Mammary_Gland - method, tissue, subtissue, age, lineage, cell ontology and free annotation

RTF1 SRRM1 TAF3 BRD2 LRRFIP1 SON

1.45e-07187576663991a8afe652e92363b64bcbd68c14d0307f0e
ToppCell(03)_KRT6B+-(2)_GFP_FOXI1|(03)_KRT6B+ / shred by cell type by condition

RTF1 SRRM1 BRD4 KTN1 LARP7 LRRFIP1

2.09e-07199576c425e7975f492ed5cfcca022248adb627e1d27d4
ToppCell(00)_Basal-(2)_GFP_FOXI1|(00)_Basal / shred by cell type by condition

RTF1 SRRM1 BRD4 KTN1 LARP7 LRRFIP1

2.09e-0719957619674e1eaeb51e4196d847cb62aa437c852951d3
ToppCellTCGA-Bile_Duct-Primary_Tumor-Cholangiocarcinoma|TCGA-Bile_Duct / Sample_Type by Project: Shred V9

TCOF1 RBMX2 CIR1 SMARCA4 SSRP1 IK

2.15e-07200576ad2a6da0b1ae7a9212a3c91e5eec4baa7481d8dc
ToppCellTCGA-Bile_Duct-Primary_Tumor|TCGA-Bile_Duct / Sample_Type by Project: Shred V9

TCOF1 RBMX2 CIR1 SMARCA4 SSRP1 IK

2.15e-072005760350e5ffd36033099b7e32a1fdd790fff99790dc
ToppCell(08)_Brush+PNEC-(2)_GFP_FOXI1|(08)_Brush+PNEC / shred by cell type by condition

RTF1 SRRM1 RBBP6 BRD4 LRRFIP1

9.30e-07138575817e3f639604ea95adae01e8685ffaa2e0aff7a8
ToppCell(05)_Secretory-(2)_GFP_FOXI1|(05)_Secretory / shred by cell type by condition

RTF1 SRRM1 TAF3 BRD4 KTN1

5.59e-06199575d72d87e1e530ed894c0ad5e7b5b2b1d6b59fa098
ToppCell(09)_Interm._secr.>cil.-(2)_GFP_FOXI1|(09)_Interm._secr.>cil. / shred by cell type by condition

SRRM1 RBBP6 BRD4 KTN1 LARP7

5.59e-06199575fc680f85ebd3bab4c72876a19a461b0afb5f51ce
ToppCellGlobus_pallidus-Macroglia-POLYDENDROCYTE-P3-Tnr-Polydendrocyte.Tnr.Cyth3_(Cyth3)|Globus_pallidus / BrainAtlas - Mouse McCarroll V32

FAM133B CWF19L2 CIR1 NKAP

4.41e-0515357488ca2d2c2ab19fbee13e18951b993ee05dd30f67
ToppCellGlobus_pallidus-Macroglia-POLYDENDROCYTE-P3-Tnr-Polydendrocyte.Tnr.Cyth3_(Cyth3)-|Globus_pallidus / BrainAtlas - Mouse McCarroll V32

FAM133B CWF19L2 CIR1 NKAP

4.41e-05153574553dff9688a1996d8f4ba16e60c683593d781389
ToppCell367C-Lymphocytic-ILC-ILC-2|ILC / Donor, Lineage, Cell class and subclass (all cells)

PHF20 NKAP RSBN1L

4.83e-05555737916216b3a24f9c6b966aa5392fc2bc43b3d2c4c
ToppCellrenal_medulla_nuclei-Adult_normal_reference-Epithelial-Collecting_tubule_epithelial_cell-kidney_collecting_duct_principal_cell-Outer_Medullary_Collecting_Duct_Principal_Cell|Adult_normal_reference / Celltypes from Cells and Nuclei per compartment and clinical group

ARSJ ZNF608 SLC4A4 CNGA1

9.22e-05185574d602a9b35e86e6f2a14a58e40fc4fb97f5fa3b08
ToppCellSmart-start-Cell-Wel_seq-Neoplastic-Stem-like-NPC-like-NPC-like_neural-E|Smart-start-Cell-Wel_seq / Platform, Oncotype, Lineage, Cell_class, celltype (level4), mutation group

CWF19L2 SRRM4 SREK1IP1 SON

1.11e-04194574b111d10c99d7ff7eb261cd7786cd9d9a549049b1
ToppCellSmart-start-Cell-Wel_seq-Neoplastic-Differentiated-like-MES-like-MES-like_hypoxia/MHC-E|Smart-start-Cell-Wel_seq / Platform, Oncotype, Lineage, Cell_class, celltype (level4), mutation group

CWF19L2 CIR1 SREK1IP1 SON

1.11e-041945748985095f291c1b54e45f4edece49aa26e8c8b732
ToppCellSmart-start-Cell-Wel_seq-Neoplastic-Differentiated-like-AC-like-AC-like-E|Smart-start-Cell-Wel_seq / Platform, Oncotype, Lineage, Cell_class, celltype (level4), mutation group

CWF19L2 IQCA1 SLC4A4 SON

1.13e-0419557432ec72103faccc9e37c0ecedff1998e7df6a19f6
ToppCell3'-Parenchyma_lung-Immune_Myeloid-Myeloid_macrophage-alveolar_macrophage-Alveolar_macrophages-Alveolar_macrophages_L.1.0.3.0|3' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5

CWF19L2 CIR1 LARP7 LRRFIP1

1.15e-04196574a7291291931f9e5abd6a54349bc920a0ab68a4cb
ToppCell(02)_MMP9/10+-(2)_GFP_FOXI1|(02)_MMP9/10+ / shred by cell type by condition

RTF1 BRD4 KTN1 LRRFIP1

1.22e-0419957418a7f9ced4364f45b184bd529f32ef02c27779d3
ToppCell(04)_Interm._basal>secr.-(2)_GFP_FOXI1|(04)_Interm._basal>secr. / shred by cell type by condition

RTF1 SRRM1 BRD4 KTN1

1.22e-0419957453ca3861f9e00dab3f3fbefb0837857ee39ab084
ToppCellCOVID-19-COVID-19_Mild|COVID-19 / Disease, condition lineage and cell class

FAM133B SRRM1 BRD2 CIR1

1.24e-0420057462c25042086f1afd1102e0720e933c2e476468fd
ToppCellsevere|World / Cohort 1 (10x PBMC) with disease condition, cell group and cell class

FAM133B RSBN1 SRRM1 SON

1.24e-04200574accc618d6b960bff30cb531c1226295bfc8650f6
ToppCellTCGA-Bile_Duct-Primary_Tumor-Cholangiocarcinoma-Intrahepatic|TCGA-Bile_Duct / Sample_Type by Project: Shred V9

TAF3 SMARCA4 MED1 SREK1IP1

1.24e-042005741fa8422fd820d21e285a7e7c4c6fbd8b7277d2af
DrugICI 182,780; Down 200; 1uM; MCF7; HT_HG-U133A_EA

PHF20 RBBP6 BRD4 KTN1 HMGXB4 SMARCA4 GPATCH8 MED1 SON

5.52e-10177579985_DN
DrugCaptopril [62571-86-2]; Down 200; 17.2uM; PC3; HT_HG-U133A

HMGXB4 SMARCA4 BRD3 GPATCH8 MED1 SON

5.65e-061795764585_DN
DrugOTX015

BRD2 BRD4 BRD3

8.14e-0616573ctd:C000605331
Disease1,5 anhydroglucitol measurement

PCDHA9 PCDHA13 PCDHA8 PCDHA6 PCDHA3 PCDHA1

1.45e-1129556EFO_0008009
Diseaseneutrophil count, basophil count

RTF1 PCDHA9 PCDHA13 PCDHA8 PCDHA6 PCDHA3 PCDHA1 BRD3

8.72e-09224558EFO_0004833, EFO_0005090
Diseasevisceral adipose tissue measurement, body mass index

PCDHA9 PCDHA13 PCDHA8 PCDHA6 PCDHA3 PCDHA1

1.42e-0887556EFO_0004340, EFO_0004765
Diseasepost-traumatic stress disorder symptom measurement

PCDHA8 PCDHA6 PCDHA3 PCDHA1

1.70e-0582554EFO_0008535
DiseaseAbnormality of refraction

PCDHA9 ZNF608 PCDHA13 PCDHA8 PCDHA6 PCDHA3 PCDHA1 SLC4A4

3.32e-05673558HP_0000539
DiseaseHypoplastic Left Heart Syndrome

PCDHA9 PCDHA13

3.40e-055552C0152101
Diseasepost-traumatic stress disorder

PCDHA8 PCDHA6 PCDHA3 PCDHA1 SLC4A4

3.77e-05202555EFO_0001358
Diseaseneutrophil count

RTF1 FAM133B RSBN1 PCDHA9 PCDHA13 PCDHA8 PCDHA6 PCDHA3 PCDHA1 BRD3 SLC4A4

4.09e-0513825511EFO_0004833
DiseaseAdult Medulloblastoma

BRD2 BRD4 BRD3

7.17e-0543553C0278876
DiseaseChildhood Medulloblastoma

BRD2 BRD4 BRD3

7.17e-0543553C0278510
DiseaseMelanotic medulloblastoma

BRD2 BRD4 BRD3

7.17e-0543553C1275668
DiseaseMedullomyoblastoma

BRD2 BRD4 BRD3

7.17e-0543553C0205833
DiseaseDesmoplastic Medulloblastoma

BRD2 BRD4 BRD3

7.17e-0543553C0751291
Diseaseneuroticism measurement, cognitive function measurement

PCDHA9 PHF20L1 PCDHA13 PCDHA8 PCDHA6 PCDHA3 PCDHA1

8.42e-05566557EFO_0007660, EFO_0008354
DiseaseMedulloblastoma

BRD2 BRD4 BRD3

1.13e-0450553C0025149
Diseasepulse pressure measurement

CWF19L2 PCDHA9 PCDHA13 PCDHA8 PCDHA6 PCDHA3 PCDHA1 GPATCH8 IK CEP164

2.22e-0413925510EFO_0005763
Diseasevital capacity

PCDHA9 BRD4 PCDHA13 PCDHA8 PCDHA6 PCDHA3 PCDHA1 MED1 LARP7

4.31e-041236559EFO_0004312
DiseaseSezary Syndrome

BRD9 SMARCA4

1.16e-0327552C0036920
Diseaselevel of Sphingomyelin (d42:2) in blood serum

SMARCA4 SLC4A4

1.34e-0329552OBA_2045183
Diseasediastolic blood pressure, systolic blood pressure

RTF1 BRD4 KIAA0040 SREK1IP1 CEP164 LRRFIP1

1.51e-03670556EFO_0006335, EFO_0006336
Diseaselevel of Sphingomyelin (d40:1) in blood serum

SMARCA4 SLC4A4

1.63e-0332552OBA_2045182
Diseasemelanoma (is_marker_for)

BRD2 BRD4

1.74e-0333552DOID:1909 (is_marker_for)
DiseaseGastric Adenocarcinoma

BRD2 BRD3

3.21e-0345552C0278701
Diseasecoronary artery disease

RTF1 RSBN1 CWF19L2 SRRM4 SMARCA4 KIAA0040 LRRFIP1

6.51e-031194557EFO_0001645
Diseasecongenital heart disease (implicated_via_orthology)

USP42 SON

7.39e-0369552DOID:1682 (implicated_via_orthology)

Protein segments in the cluster

PeptideGeneStartEntry
NKPKKKKEKKEKEKK

BRD3

486

Q15059
KKEKKEKEKKKKDKE

BRD3

491

Q15059
LEKKEKKKKKEKKKK

CWC25

171

Q9NXE8
KKKKKEKKKKHKKHK

CWC25

176

Q9NXE8
NKKKKKKLKDKKEKK

CHD5

96

Q8TDI0
KKLKDKKEKKAKRKK

CHD5

101

Q8TDI0
PKKKEKDKKEKKKEK

BRD4

536

O60885
KKKKKKKKSEKEKHL

BRD9

66

Q9H8M2
KNKKKKKKKEKQPKK

IQCA1

351

Q86XH1
FGKKEETKKKKKKKK

PCDHA9

916

Q9Y5H5
KKHKKDKKEKKKKKK

RBMX2

156

Q9Y388
DKKEKKKKKKEKEKA

RBMX2

161

Q9Y388
FGKKEETKKKKKKKK

PCDHA6

916

Q9UN73
SHRKSKKEKKKKKKR

MMTAG2

181

Q9BU76
KKEKKKKKKRKHKKE

MMTAG2

186

Q9BU76
KKKKRKHKKEKKKKD

MMTAG2

191

Q9BU76
FGKKEETKKKKKKKK

PCDHA8

916

Q9Y5H6
FGKKEETKKKKKKKK

PCDHA3

916

Q9Y5H8
KVKKKKKKQHKKHSK

FAM133A

221

Q8N9E0
KKKQHKKHSKKKKKK

FAM133A

226

Q8N9E0
KKKKKKQKRKKEKPN

NMT2

46

O60551
KKQKKSKKKKKKQQK

ARSJ

571

Q5FYB0
KLTKMRAKKKKKKKK

KIAA2026

676

Q5HYC2
RAKKKKKKKKKLKDV

KIAA2026

681

Q5HYC2
QPEKNKKKKKKKKKK

KIAA0040

61

Q15053
KKKKKKKKKKDEEDL

KIAA0040

66

Q15053
KKKKKHKKSSKHKRK

GPATCH8

676

Q9UKJ3
VKKKKKKDKHSKKAK

CWF19L2

76

Q2TBE0
KKDKHSKKAKKEKKK

CWF19L2

81

Q2TBE0
KKKLKKDDKKKDTKK

CYLC1

351

P35663
KTDKKKAEKKKNKKK

KTN1

51

Q86UP2
EEKKKKKKKKGRMKK

LARP7

216

Q4G0J3
IKKKKKSKKSKKKKD

HMGXB4

316

Q9UGU5
KSKKSKKKKDKEKHK

HMGXB4

321

Q9UGU5
SKKKKKKKEKKKHKK

RBBP6

1726

Q7Z6E9
KKKEKKKHKKHKKHK

RBBP6

1731

Q7Z6E9
KKKKSKKNKDKEKEK

RBBP6

1766

Q7Z6E9
FGKKEETKKKKKKKK

PCDHA1

916

Q9Y5I3
FGKKEETKKKKKKKK

PCDHA13

916

Q9Y5I0
KTKKKKKHKKHSKKK

FAM133B

221

Q5BKY9
KKHKKHSKKKKKKAA

FAM133B

226

Q5BKY9
EAKKKRKLKKKAKKV

CUSTOS

186

Q96C57
KYKDKRRKKKKKRKK

ARL6IP4

106

Q66PJ3
KKRKKLKKKGKEKAE

ARL6IP4

116

Q66PJ3
IKKEKKKSKKDKKAK

DKC1

466

O60832
KVIKKVKKKKEKEKD

PROCA1

231

Q8NCQ7
KHKKHKKEKKKVKDK

MED1

1496

Q15648
QKKTKNKKKKNKKKK

LRRFIP1

566

Q32MZ4
RAKKAKKKEKKKKHR

NKAP

231

Q8N5F7
KKKEKKKKHRSKKYK

NKAP

236

Q8N5F7
PKQKKKKKKKKKSKQ

PHF20L1

566

A8MW92
FVRVKPKKKKKKKKK

PHF20

536

Q9BVI0
KKLKTAKKKEKKEKK

RTF1

226

Q92541
LKKIKKKKKKKHRED

RSBN1

251

Q5VWQ0
KVKKKKKKKHKENEK

RSBN1L

251

Q6PCB5
VKKKLKKELKTKMKK

TAF3

521

Q5VWG9
VKEKEKKKDKKEKKK

TAF3

696

Q5VWG9
KKKDKKEKKKKKEKE

TAF3

701

Q5VWG9
KEKKKKKEKEKEKKE

TAF3

706

Q5VWG9
GKEKHKKKKKKEKHK

RP9

181

Q8TA86
KKKKKKEKHKKRKKE

RP9

186

Q8TA86
KEKHKKRKKEKKKKK

RP9

191

Q8TA86
KRKKEKKKKKKRKHK

RP9

196

Q8TA86
DKRKKDKEKKEKKKK

TCOF1

1446

Q13428
AKRKVKKKKRKKKTK

LIAT1

81

Q6ZQX7
VAKEKKKKKKKKKAE

SMARCA4

576

P51532
KKKEKSKEKIKLKKK

SREK1IP1

76

Q8N9Q2
KKGKHHKKEKKKRKK

SREK1IP1

126

Q8N9Q2
KSKKKKKVKVKMEKK

SSRP1

626

Q08945
KRKREKKEKKKKRKA

BRD2

546

P25440
KKKKKKEKKDKKDRD

CEP164

111

Q9UPV0
LEKKKKKKDRKKKKF

CIR1

231

Q86X95
KKKKKKEKKSKSDDK

CNGA1

101

P29973
DPEKKKKKKDKEKKK

CNGA1

121

P29973
KKKKDKEKKKKEEKS

CNGA1

126

P29973
KRVKAKKKKKKKKHK

NKAPL

221

Q5M9Q1
KKKKKKKKHKTKKKK

NKAPL

226

Q5M9Q1
KKKHKTKKKKNKKTK

NKAPL

231

Q5M9Q1
KAKKHKKSKKKKKSK

USP42

1191

Q9H9J4
KDSKAAKKKKKKKKH

ZCCHC17

221

Q9NP64
AKKKKKKKKHKKKHK

ZCCHC17

226

Q9NP64
KKKKKDKKHKKDKKH

SRRM1

811

Q8IYB3
KDKKHKKHKKHKKEK

SRRM1

821

Q8IYB3
VKKKKKKSSKKHKRR

SRRM4

131

A7MD48
QEKLKEEKKKKKKKK

SLU7

491

O95391
EEKKKKKKKKKKHRK

SLU7

496

O95391
KKLKKKDKGKLEEKK

IK

296

Q13123
KKKKEKRKLKDKEGK

ZNF608

811

Q9ULD9
KKKKEDEKKKKKKKG

SLC4A4

1011

Q9Y6R1
KKSKKHKKHKNKKKK

SON

106

P18583
HKKHKNKKKKKKKEK

SON

111

P18583
NKKKKKKKEKEKKYK

SON

116

P18583