Cluster composition

Functions

CategoryNameIntersectionWithQueryPValueGenesInTermGenesInQueryGenesInTermInQueryID
GeneOntologyMolecularFunctionRNA polymerase II cis-regulatory region sequence-specific DNA binding

FOXD2 SOX4 SOX11 SP8 ZNF384 JUNB FOXD3 GSX1 FEZF2 BHLHE22 DACH1 POU3F3 SUZ12 EMX1 FOXA1 ZBTB7B CUX1 FOXF2 FOXD1 TWIST1 RAD23B

1.48e-1112445821GO:0000978
GeneOntologyMolecularFunctioncis-regulatory region sequence-specific DNA binding

FOXD2 SOX4 SOX11 SP8 ZNF384 JUNB FOXD3 GSX1 FEZF2 BHLHE22 DACH1 POU3F3 SUZ12 EMX1 FOXA1 ZBTB7B CUX1 FOXF2 FOXD1 TWIST1 RAD23B

2.22e-1112715821GO:0000987
GeneOntologyMolecularFunctionRNA polymerase II transcription regulatory region sequence-specific DNA binding

FOXD2 SOX4 SOX11 SP8 ZNF384 JUNB FOXD3 GSX1 FEZF2 BHLHE22 DACH1 POU3F3 SUZ12 EMX1 FOXA1 ZBTB7B CUX1 FOXF2 FOXD1 TWIST1 RAD23B

2.89e-1014595821GO:0000977
GeneOntologyMolecularFunctionDNA-binding transcription factor activity, RNA polymerase II-specific

FOXD2 SOX4 SOX11 SP8 ZNF384 JUNB FOXD3 GSX1 FEZF2 BHLHE22 DACH1 POU3F3 EMX1 FOXA1 ZBTB7B CUX1 FOXF2 FOXD1 TWIST1

8.10e-0914125819GO:0000981
GeneOntologyMolecularFunctionDNA-binding transcription activator activity, RNA polymerase II-specific

FOXD2 SOX4 SOX11 ZNF384 JUNB GSX1 FEZF2 FOXA1 ZBTB7B FOXF2 FOXD1 TWIST1

5.79e-085605812GO:0001228
GeneOntologyMolecularFunctionDNA-binding transcription activator activity

FOXD2 SOX4 SOX11 ZNF384 JUNB GSX1 FEZF2 FOXA1 ZBTB7B FOXF2 FOXD1 TWIST1

6.51e-085665812GO:0001216
GeneOntologyMolecularFunctionstructural constituent of skin epidermis

KRT2 KRT3 LORICRIN KRT79

7.27e-0643584GO:0030280
GeneOntologyMolecularFunctionchromatin binding

PRDM8 FEZF2 BHLHE22 MLLT6 SUZ12 FOXA1 CUX1 NUP153 RING1

2.60e-04739589GO:0003682
GeneOntologyBiologicalProcessnegative regulation of DNA-templated transcription

SOX4 SOX11 FOXD3 PRDM8 FEZF2 BHLHE22 DACH1 RBM15B DNAJB4 POU3F3 SUZ12 FOXA1 ZBTB7B CUX1 FOXF2 FOXD1 TWIST1 ZNF503 RING1

2.95e-0913995719GO:0045892
GeneOntologyBiologicalProcessnegative regulation of RNA biosynthetic process

SOX4 SOX11 FOXD3 PRDM8 FEZF2 BHLHE22 DACH1 RBM15B DNAJB4 POU3F3 SUZ12 FOXA1 ZBTB7B CUX1 FOXF2 FOXD1 TWIST1 ZNF503 RING1

3.47e-0914135719GO:1902679
GeneOntologyBiologicalProcesscamera-type eye morphogenesis

SOX4 SOX11 HCN1 BHLHE22 FOXF2 TWIST1 RING1

4.44e-07171577GO:0048593
GeneOntologyBiologicalProcesspositive regulation of transcription by RNA polymerase II

FOXD2 SOX4 SOX11 ZNF384 JUNB FOXD3 GSX1 FEZF2 BHLHE22 MLLT6 POU3F3 FOXA1 ZBTB7B FOXF2 FOXD1 TWIST1

6.86e-0713905716GO:0045944
GeneOntologyBiologicalProcesseye morphogenesis

SOX4 SOX11 HCN1 BHLHE22 FOXF2 TWIST1 RING1

1.45e-06204577GO:0048592
GeneOntologyBiologicalProcessepithelium development

SOX4 SOX11 KRT2 FNDC3B KRT3 KRT24 LORICRIN POU3F3 EMX1 FOXA1 KRT79 CUX1 FOXF2 FOXD1 TWIST1

7.29e-0614695715GO:0060429
GeneOntologyBiologicalProcessepithelial cell differentiation

SOX4 SOX11 KRT2 FNDC3B KRT3 KRT24 LORICRIN EMX1 FOXA1 KRT79 CUX1

2.20e-058705711GO:0030855
GeneOntologyBiologicalProcessnegative regulation of transcription by RNA polymerase II

SOX4 SOX11 FOXD3 FEZF2 DACH1 DNAJB4 POU3F3 SUZ12 FOXA1 ZBTB7B CUX1 TWIST1

2.47e-0510535712GO:0000122
GeneOntologyBiologicalProcesssensory organ morphogenesis

SOX4 SOX11 HCN1 BHLHE22 FOXF2 TWIST1 RING1

4.28e-05343577GO:0090596
GeneOntologyBiologicalProcessforebrain regionalization

FEZF2 BHLHE22 EMX1

4.41e-0525573GO:0021871
GeneOntologyBiologicalProcessintermediate filament organization

KRT2 KRT3 KRT24 KRT79

5.50e-0575574GO:0045109
GeneOntologyBiologicalProcesspattern specification process

SP8 FEZF2 BHLHE22 EMX1 FOXA1 FOXD1 SYNGAP1 RING1

9.34e-05526578GO:0007389
GeneOntologyBiologicalProcessembryonic camera-type eye morphogenesis

SOX11 FOXF2 TWIST1

9.38e-0532573GO:0048596
GeneOntologyBiologicalProcesskeratinization

KRT2 KRT3 LORICRIN KRT79

9.83e-0587574GO:0031424
GeneOntologyBiologicalProcessneuron fate commitment

GSX1 FEZF2 BHLHE22 FOXA1

1.17e-0491574GO:0048663
GeneOntologyBiologicalProcessembryonic eye morphogenesis

SOX11 FOXF2 TWIST1

1.58e-0438573GO:0048048
GeneOntologyBiologicalProcessintermediate filament cytoskeleton organization

KRT2 KRT3 KRT24 KRT79

1.62e-0499574GO:0045104
GeneOntologyBiologicalProcesscamera-type eye development

SOX4 SOX11 HCN1 BHLHE22 FOXF2 TWIST1 RING1

1.66e-04426577GO:0043010
GeneOntologyBiologicalProcessintermediate filament-based process

KRT2 KRT3 KRT24 KRT79

1.69e-04100574GO:0045103
GeneOntologyBiologicalProcesscorpus callosum morphogenesis

PRDM8 BHLHE22

2.08e-048572GO:0021540
GeneOntologyBiologicalProcessembryonic camera-type eye development

SOX11 FOXF2 TWIST1

2.61e-0445573GO:0031076
GeneOntologyBiologicalProcesscerebral cortex regionalization

BHLHE22 EMX1

2.67e-049572GO:0021796
GeneOntologyBiologicalProcesscentral nervous system neuron differentiation

PRDM8 GSX1 FEZF2 BHLHE22 EMX1

3.30e-04217575GO:0021953
GeneOntologyBiologicalProcesscorticospinal tract morphogenesis

PRDM8 BHLHE22

3.33e-0410572GO:0021957
GeneOntologyBiologicalProcessregionalization

SP8 FEZF2 BHLHE22 EMX1 FOXA1 FOXD1 RING1

3.34e-04478577GO:0003002
GeneOntologyBiologicalProcesseye development

SOX4 SOX11 HCN1 BHLHE22 FOXF2 TWIST1 RING1

3.42e-04480577GO:0001654
GeneOntologyBiologicalProcessvisual system development

SOX4 SOX11 HCN1 BHLHE22 FOXF2 TWIST1 RING1

3.55e-04483577GO:0150063
GeneOntologyBiologicalProcessneuroepithelial cell differentiation

SOX4 SOX11 EMX1

3.79e-0451573GO:0060563
GeneOntologyBiologicalProcesssensory system development

SOX4 SOX11 HCN1 BHLHE22 FOXF2 TWIST1 RING1

3.92e-04491577GO:0048880
GeneOntologyBiologicalProcessnoradrenergic neuron differentiation

SOX4 SOX11

4.06e-0411572GO:0003357
GeneOntologyBiologicalProcessembryonic camera-type eye formation

SOX11 TWIST1

5.74e-0413572GO:0060900
GeneOntologyBiologicalProcessnegative regulation of cell differentiation

SOX4 SOX11 FNDC3B FEZF2 SUZ12 FOXA1 ZBTB7B TWIST1 SYNGAP1

6.16e-04875579GO:0045596
GeneOntologyBiologicalProcessmitral valve morphogenesis

SOX4 TWIST1

7.70e-0415572GO:0003183
GeneOntologyBiologicalProcesssensory organ development

SOX4 SOX11 HCN1 BHLHE22 CUX1 FOXF2 TWIST1 RING1

8.45e-04730578GO:0007423
GeneOntologyBiologicalProcessmitral valve development

SOX4 TWIST1

8.78e-0416572GO:0003174
GeneOntologyBiologicalProcesseyelid development in camera-type eye

SOX11 TWIST1

8.78e-0416572GO:0061029
GeneOntologyBiologicalProcesstelencephalon regionalization

BHLHE22 EMX1

8.78e-0416572GO:0021978
GeneOntologyBiologicalProcesscolumnar/cuboidal epithelial cell differentiation

SOX4 SOX11 EMX1 FOXA1

1.10e-03164574GO:0002065
GeneOntologyBiologicalProcessepidermal cell differentiation

KRT2 KRT3 LORICRIN KRT79 CUX1

1.11e-03284575GO:0009913
GeneOntologyCellularComponentchromatin

FOXD2 SOX4 SOX11 SP8 JUNB FOXD3 GSX1 BHLHE22 POU3F3 SUZ12 EMX1 FOXA1 CUX1 FOXF2 FOXD1 TWIST1 RING1

3.13e-0714805817GO:0000785
GeneOntologyCellularComponentsex chromatin

SUZ12 RING1

1.57e-047582GO:0001739
GeneOntologyCellularComponentmethyltransferase complex

BOD1 PRDM8 RBM15B SUZ12

2.31e-04108584GO:0034708
MousePhenoexcessive scratching

PRDM8 COL17A1 BHLHE22 RAD23B

1.25e-0715454MP:0001412
MousePhenoabsent corpus callosum

PRDM8 FEZF2 BHLHE22 EMX1

3.58e-0633454MP:0002196
MousePhenoabnormal forebrain morphology

SOX11 JUNB PRDM8 GSX1 LRFN2 FEZF2 BHLHE22 POU3F3 NBEA SUZ12 EMX1 FOXD1 ZNF503 SYNGAP1

3.90e-0610724514MP:0000783
MousePhenolethality during fetal growth through weaning, complete penetrance

SOX4 SOX11 SP8 FNDC3B CNNM2 DACH1 POU3F3 NBEA FOXA1 FOXF2 FOXD1 TWIST1 ZNF503 SYNGAP1

2.71e-0512694514MP:0011111
MousePhenoneonatal lethality

SOX11 FNDC3B GSX1 DACH1 POU3F3 NBEA CUX1 FOXF2 FOXD1 TWIST1 ZNF503

3.36e-057994511MP:0002058
MousePhenoperinatal lethality

SOX11 SP8 FNDC3B GSX1 DACH1 POU3F3 NBEA CUX1 FOXF2 FOXD1 TWIST1 ZNF503 RAD23B

3.70e-0511304513MP:0002081
MousePhenoneonatal lethality, complete penetrance

SOX11 FNDC3B DACH1 POU3F3 NBEA FOXF2 FOXD1 TWIST1 ZNF503

4.20e-05534459MP:0011087
MousePhenoincreased freezing behavior

SOX4 PRDM8 LRFN2 COL17A1 RETREG2

5.42e-05128455MP:0020421
MousePhenoabnormal corpus callosum morphology

PRDM8 FEZF2 BHLHE22 SUZ12 EMX1

5.63e-05129455MP:0000780
MousePhenostereotypic behavior

PRDM8 LRFN2 COL17A1 BHLHE22 SYNGAP1 RAD23B

5.94e-05214456MP:0001408
MousePhenoabnormal dorsal telencephalic commissure morphology

PRDM8 FEZF2 BHLHE22 SUZ12 EMX1

6.28e-05132455MP:0008219
MousePhenoperinatal lethality, complete penetrance

SOX11 SP8 FNDC3B DACH1 POU3F3 NBEA FOXF2 FOXD1 TWIST1 ZNF503

6.94e-057124510MP:0011089
MousePhenoabnormal grooming behavior

PRDM8 COL17A1 BHLHE22 NBEA RAD23B

7.49e-05137455MP:0001440
MousePhenoabnormal cerebral hemisphere morphology

SOX11 PRDM8 LRFN2 FEZF2 BHLHE22 POU3F3 SUZ12 EMX1 SYNGAP1

1.02e-04599459MP:0008540
MousePhenoabnormal head morphology

SOX11 KRT2 SP8 PRDM8 GSX1 CNNM2 FEZF2 NBEA FOXF2 TWIST1 ZNF503 RAD23B

1.58e-0411204512MP:0000432
MousePhenoabnormal brain commissure morphology

PRDM8 FEZF2 BHLHE22 SUZ12 EMX1

1.60e-04161455MP:0002199
MousePhenoabnormal freezing behavior

SOX4 PRDM8 LRFN2 COL17A1 RETREG2

1.70e-04163455MP:0020420
MousePhenoabnormal telencephalon morphology

SOX11 PRDM8 LRFN2 FEZF2 BHLHE22 POU3F3 SUZ12 EMX1 ZNF503 SYNGAP1

2.06e-048124510MP:0000787
MousePhenocraniofacial phenotype

SOX11 KRT2 SP8 PRDM8 GSX1 CNNM2 FEZF2 POU3F3 NBEA FOXF2 TWIST1 ZNF503 RAD23B

2.69e-0413724513MP:0005382
MousePhenoabnormal craniofacial morphology

SOX11 KRT2 SP8 PRDM8 GSX1 CNNM2 FEZF2 POU3F3 NBEA FOXF2 TWIST1 ZNF503 RAD23B

2.69e-0413724513MP:0000428
MousePhenoshort ureter

FOXD2 FOXD1

2.80e-048452MP:0002990
MousePhenocleft palate

SOX11 SP8 NBEA FOXF2 TWIST1 RAD23B

3.06e-04289456MP:0000111
MousePhenooral cleft

SOX11 SP8 NBEA FOXF2 TWIST1 RAD23B

3.18e-04291456MP:0021164
MousePhenoabnormal nervous system tract morphology

PRDM8 FEZF2 BHLHE22 SUZ12 EMX1

3.38e-04189455MP:0000778
MousePhenoabnormal axon guidance

PRDM8 FEZF2 BHLHE22

4.02e-0445453MP:0002961
MousePhenoabnormal brain white matter morphology

PRDM8 FEZF2 BHLHE22 SUZ12 EMX1

5.01e-04206455MP:0008026
MousePhenoabnormal palate morphology

SOX11 SP8 NBEA FOXF2 TWIST1 RAD23B

5.36e-04321456MP:0003755
MousePhenoabsent hippocampal commissure

PRDM8 BHLHE22

6.55e-0412452MP:0008223
MousePhenopalatal shelves fail to meet at midline

SOX11 SP8 FOXF2

7.28e-0455453MP:0009888
DomainTF_fork_head_CS_2

FOXD2 FOXD3 FOXA1 FOXF2 FOXD1

2.76e-0746575IPR030456
DomainTF_fork_head_CS_1

FOXD2 FOXD3 FOXA1 FOXF2 FOXD1

3.08e-0747575IPR018122
DomainFH

FOXD2 FOXD3 FOXA1 FOXF2 FOXD1

3.81e-0749575SM00339
DomainFORK_HEAD_1

FOXD2 FOXD3 FOXA1 FOXF2 FOXD1

3.81e-0749575PS00657
DomainFORK_HEAD_2

FOXD2 FOXD3 FOXA1 FOXF2 FOXD1

3.81e-0749575PS00658
DomainFork_head_dom

FOXD2 FOXD3 FOXA1 FOXF2 FOXD1

3.81e-0749575IPR001766
DomainFORK_HEAD_3

FOXD2 FOXD3 FOXA1 FOXF2 FOXD1

3.81e-0749575PS50039
DomainForkhead

FOXD2 FOXD3 FOXA1 FOXF2 FOXD1

3.81e-0749575PF00250
DomainIntermediate_filament_CS

KRT2 KRT3 KRT24 KRT79

4.06e-0563574IPR018039
DomainKeratin_2_head

KRT2 KRT3 KRT79

5.21e-0524573IPR032444
DomainKeratin_2_head

KRT2 KRT3 KRT79

5.21e-0524573PF16208
DomainFilament

KRT2 KRT3 KRT24 KRT79

6.50e-0571574SM01391
DomainKeratin_II

KRT2 KRT3 KRT79

6.67e-0526573IPR003054
DomainIF

KRT2 KRT3 KRT24 KRT79

6.87e-0572574PS00226
DomainFilament

KRT2 KRT3 KRT24 KRT79

7.25e-0573574PF00038
DomainIF

KRT2 KRT3 KRT24 KRT79

8.49e-0576574IPR001664
Domain-

FOXD2 FOXD3 FOXA1 FOXF2 FOXD1

5.29e-042185751.10.10.10
DomainWHTH_DNA-bd_dom

FOXD2 FOXD3 FOXA1 FOXF2 FOXD1

8.48e-04242575IPR011991
DomaintRNA-bd_arm

KRT3 CUX1

2.42e-0324572IPR010978
DomainHomeobox_CS

GSX1 POU3F3 EMX1 CUX1

2.49e-03186574IPR017970
Domain-

POU3F3 CUX1

3.06e-03275721.10.260.40
DomainLambda_DNA-bd_dom

POU3F3 CUX1

3.52e-0329572IPR010982
DomainUBA

DHX57 RAD23B

5.39e-0336572PF00627
DomainHomeobox

GSX1 POU3F3 EMX1 CUX1

5.64e-03234574PF00046
DomainHOMEOBOX_1

GSX1 POU3F3 EMX1 CUX1

5.81e-03236574PS00027
DomainHOX

GSX1 POU3F3 EMX1 CUX1

5.90e-03237574SM00389
DomainHOMEOBOX_2

GSX1 POU3F3 EMX1 CUX1

6.08e-03239574PS50071
DomainHomeobox_dom

GSX1 POU3F3 EMX1 CUX1

6.08e-03239574IPR001356
DomainUBA

DHX57 RAD23B

7.97e-0344572IPR015940
DomainKeratin_I

KRT3 KRT24

7.97e-0344572IPR002957
DomainZINC_FINGER_C2H2_2

SP8 ZNF384 PRDM8 FEZF2 SUZ12 ZBTB7B ZNF503

8.98e-03775577PS50157
DomainUBA

DHX57 RAD23B

9.06e-0347572PS50030
DomainZINC_FINGER_C2H2_1

SP8 ZNF384 PRDM8 FEZF2 SUZ12 ZBTB7B ZNF503

9.10e-03777577PS00028
Domain-

CNNM2 HCN1

9.43e-03485722.60.120.10
DomainZnf_C2H2-like

SP8 ZNF384 PRDM8 FEZF2 SUZ12 ZBTB7B ZNF503

1.03e-02796577IPR015880
DomainRmlC-like_jellyroll

CNNM2 HCN1

1.06e-0251572IPR014710
Domain-

GSX1 POU3F3 EMX1 CUX1

1.09e-022835741.10.10.60
DomainZnF_C2H2

SP8 ZNF384 PRDM8 FEZF2 SUZ12 ZBTB7B ZNF503

1.11e-02808577SM00355
DomainHMG_box

SOX4 SOX11

1.14e-0253572PF00505
DomainHMG_BOX_2

SOX4 SOX11

1.18e-0254572PS50118
DomainHMG

SOX4 SOX11

1.18e-0254572SM00398
Domain-

SOX4 SOX11

1.23e-02555721.10.30.10
PathwayREACTOME_FORMATION_OF_THE_CORNIFIED_ENVELOPE

KRT2 KRT3 KRT24 LORICRIN KRT79

3.02e-05129405M27649
PathwayREACTOME_REGULATION_OF_CDH11_GENE_TRANSCRIPTION

PRDM8 BHLHE22

3.48e-0410402M48016
PathwayREACTOME_KERATINIZATION

KRT2 KRT3 KRT24 LORICRIN KRT79

3.50e-04217405M27640
Pubmed

Cis-regulatory control of corticospinal system development and evolution.

SOX4 SOX11 FEZF2 EMX1 CUX1

1.38e-111358522678282
Pubmed

Dlx1&2 and Mash1 transcription factors control striatal patterning and differentiation through parallel and overlapping pathways.

SOX4 SOX11 SP8 GSX1 FEZF2 POU3F3 EMX1 ZNF503

6.41e-1113458819030180
Pubmed

Impact of cytosine methylation on DNA binding specificities of human transcription factors.

FOXD2 SOX4 SP8 ZNF384 JUNB FOXD3 GSX1 BHLHE22 EMX1 FOXA1 ZBTB7B CUX1

8.82e-11544581228473536
Pubmed

A census of human transcription factors: function, expression and evolution.

FOXD2 SOX4 SOX11 ZNF384 JUNB FOXD3 GSX1 BHLHE22 POU3F3 EMX1 FOXA1 ZBTB7B FOXF2 TWIST1

2.16e-10908581419274049
Pubmed

DOT1L promotes progenitor proliferation and primes neuronal layer identity in the developing cerebral cortex.

SOX4 SOX11 POU3F3 EMX1 CUX1

3.55e-102358530329130
Pubmed

Dlx1&2 and Mash1 transcription factors control MGE and CGE patterning and differentiation through parallel and overlapping pathways.

SOX4 SOX11 SP8 GSX1 FEZF2 EMX1 ZNF503

2.22e-0913058719386638
Pubmed

Usp11 controls cortical neurogenesis and neuronal migration through Sox11 stabilization.

SOX4 SOX11 EMX1 CUX1

4.92e-091358433579706
Pubmed

Transcriptional network orchestrating regional patterning of cortical progenitors.

SP8 FEZF2 DACH1 POU3F3 EMX1

5.96e-093958534921112
Pubmed

FOXG1 sequentially orchestrates subtype specification of postmitotic cortical projection neurons.

SOX4 SOX11 FEZF2 CUX1

6.88e-091458435613274
Pubmed

Cooperative function of POU proteins and SOX proteins in glial cells.

SOX4 SOX11 POU3F3

4.39e-0855839632656
Pubmed

Single-cell atlas of craniogenesis uncovers SOXC-dependent, highly proliferative, and myofibroblast-like osteodermal progenitors.

SOX4 SOX11 FOXD1 TWIST1

1.85e-073058435830813
Pubmed

Temporal patterning of apical progenitors and their daughter neurons in the developing neocortex.

FEZF2 DACH1 POU3F3 EMX1 CUX1

2.67e-078258531073041
Pubmed

ISLET1-Dependent β-Catenin/Hedgehog Signaling Is Required for Outgrowth of the Lower Jaw.

FOXD2 FOXA1 FOXF2 FOXD1

3.51e-073558428069742
Pubmed

SOX11 and SOX4 drive the reactivation of an embryonic gene program during murine wound repair.

SOX4 SOX11 LORICRIN

3.67e-07958331492871
Pubmed

An amphioxus winged helix/forkhead gene, AmphiFoxD: insights into vertebrate neural crest evolution.

FOXD2 FOXD3 FOXD1

3.67e-07958312412011
Pubmed

Bhlhb5 and Prdm8 form a repressor complex involved in neuronal circuit assembly.

PRDM8 BHLHE22 EMX1

3.67e-07958322284184
Pubmed

A network of genetic repression and derepression specifies projection fates in the developing neocortex.

FEZF2 BHLHE22 EMX1

3.67e-07958323144223
Pubmed

Delayed maturation and migration of excitatory neurons in the juvenile mouse paralaminar amygdala.

SOX4 SP8 BHLHE22 EMX1

4.93e-073858438086370
Pubmed

LHX2 Interacts with the NuRD Complex and Regulates Cortical Neuron Subtype Determinants Fezf2 and Sox11.

SOX11 FEZF2 EMX1

7.19e-071158328053041
Pubmed

Identification of nine tissue-specific transcription factors of the hepatocyte nuclear factor 3/forkhead DNA-binding-domain family.

FOXD2 FOXD3 FOXD1

7.19e-07115837683413
Pubmed

Satb2 Regulates the Differentiation of Both Callosal and Subcerebral Projection Neurons in the Developing Cerebral Cortex.

FEZF2 HCN1 EMX1

9.58e-071258325037921
Pubmed

SOX5 postmitotically regulates migration, postmigratory differentiation, and projections of subplate and deep-layer neocortical neurons.

FEZF2 EMX1 CUX1

1.24e-061358318840685
Pubmed

PRC1 preserves epidermal tissue integrity independently of PRC2.

COL17A1 TWIST1 RING1

1.58e-061458330567998
Pubmed

Cilia-dependent GLI processing in neural crest cells is required for tongue development.

FOXD2 FOXF2 FOXD1

1.58e-061458328286175
Pubmed

Orchestration of Neuronal Differentiation and Progenitor Pool Expansion in the Developing Cortex by SoxC Genes.

SOX4 SOX11 EMX1

1.97e-061558326203155
Pubmed

Direct and indirect neurogenesis generate a mosaic of distinct glutamatergic projection neuron types in cerebral cortex.

FEZF2 EMX1 CUX1

1.97e-061558337348506
Pubmed

Disrupted ERK signaling during cortical development leads to abnormal progenitor proliferation, neuronal and network excitability and behavior, modeling human neuro-cardio-facial-cutaneous and related syndromes.

POU3F3 EMX1 CUX1

1.97e-061558322723706
Pubmed

Imbalance of Excitatory/Inhibitory Neuron Differentiation in Neurodevelopmental Disorders with an NR2F1 Point Mutation.

GSX1 EMX1 CUX1

1.97e-061558332320667
Pubmed

Lmo4 establishes rostral motor cortex projection neuron subtype diversity.

BHLHE22 EMX1 CUX1

1.97e-061558323575831
Pubmed

Fezl regulates the differentiation and axon targeting of layer 5 subcortical projection neurons in cerebral cortex.

CDH22 FEZF2 BHLHE22 EMX1 CUX1

2.26e-0612658516284245
Pubmed

Single-cell transcriptomics of the early developing mouse cerebral cortex disentangle the spatial and temporal components of neuronal fate acquisition.

SP8 BHLHE22 EMX1 ZNF503

2.40e-065658434170322
Pubmed

A genome-wide screen to identify transcription factors expressed in pelvic Ganglia of the lower urinary tract.

FOXD2 SOX4 FOXD3 POU3F3 FOXA1 ZBTB7B CUX1 TWIST1 RING1

2.52e-0670958922988430
Pubmed

Disrupted mossy fiber connections from defective embryonic neurogenesis contribute to SOX11-associated schizophrenia.

SOX11 EMX1

2.73e-06258235254515
Pubmed

Differential expression of SOX4 and SOX11 in medulloblastoma.

SOX4 SOX11

2.73e-06258212125983
Pubmed

SoxC transcription factors are required for neuronal differentiation in adult hippocampal neurogenesis.

SOX4 SOX11

2.73e-06258222378879
Pubmed

FOXD3 modulates migration through direct transcriptional repression of TWIST1 in melanoma.

FOXD3 TWIST1

2.73e-06258225061102
Pubmed

Twist1 promotes breast cancer invasion and metastasis by silencing Foxa1 expression.

FOXA1 TWIST1

2.73e-06258227524420
Pubmed

Emx1-expressing neural stem cells in the subventricular zone give rise to new interneurons in the ischemic injured striatum.

SP8 EMX1

2.73e-06258221219481
Pubmed

The early retinal progenitor-expressed gene Sox11 regulates the timing of the differentiation of retinal cells.

SOX4 SOX11

2.73e-06258223318640
Pubmed

Molecular architecture of the developing mouse brain.

SP8 IRS4 FEZF2 EMX1 FOXA1

2.85e-0613258534321664
Pubmed

ISL1/SHH/CXCL12 signaling regulates myogenic cell migration during mouse tongue development.

FOXD2 FOXF2 FOXD1

2.94e-061758336196625
Pubmed

Postmitotic accumulation of histone variant H3.3 in new cortical neurons establishes neuronal chromatin, transcriptome, and identity.

BHLHE22 EMX1 CUX1

3.53e-061858335930666
Pubmed

Cited2 Regulates Neocortical Layer II/III Generation and Somatosensory Callosal Projection Neuron Development and Connectivity.

BHLHE22 EMX1 CUX1

3.53e-061858327307230
Pubmed

New consensus nomenclature for mammalian keratins.

KRT2 KRT3 KRT24 KRT79

3.85e-066358416831889
Pubmed

Hedgehog signaling in the neural crest cells regulates the patterning and growth of facial primordia.

FOXD2 FOXF2 FOXD1

4.18e-061958315107405
Pubmed

Tle4 controls both developmental acquisition and early post-natal maturation of corticothalamic projection neuron identity.

FEZF2 BHLHE22 EMX1

4.18e-061958337561632
Pubmed

PRDM16 regulates a temporal transcriptional program to promote progression of cortical neural progenitors.

FEZF2 EMX1 CUX1

4.18e-061958333597191
Pubmed

Splicing factor TRA2B is required for neural progenitor survival.

FEZF2 BHLHE22 EMX1

4.18e-061958323818142
Pubmed

Loss of inhibitory interneurons in the dorsal spinal cord and elevated itch in Bhlhb5 mutant mice.

PRDM8 BHLHE22 EMX1

4.92e-062058320346763
Pubmed

Neurog2 and Ascl1 together regulate a postmitotic derepression circuit to govern laminar fate specification in the murine neocortex.

FEZF2 BHLHE22 CUX1

5.73e-062158328584103
Pubmed

Cardiac outflow tract development relies on the complex function of Sox4 and Sox11 in multiple cell types.

SOX4 SOX11 TWIST1

6.63e-062258324310815
Pubmed

Embryonic temporal-spatial delineation of excitatory spinal V3 interneuron diversity.

SP8 PRDM8 BHLHE22

6.63e-062258338160393
Pubmed

Ctip1 Regulates the Balance between Specification of Distinct Projection Neuron Subtypes in Deep Cortical Layers.

FEZF2 EMX1 CUX1

6.63e-062258327117402
Pubmed

A radial glia-specific role of RhoA in double cortex formation.

FEZF2 EMX1 CUX1

7.61e-062358322405202
Pubmed

SOX4, SOX11 and PAX6 mRNA expression was identified as a (prognostic) marker for the aggressiveness of neuroendocrine tumors of the lung by using next-generation expression analysis (NanoString).

SOX4 SOX11

8.19e-06358225804118
Pubmed

CD10, p63 and CD99 expression in the differential diagnosis of atypical fibroxanthoma, spindle cell squamous cell carcinoma and desmoplastic melanoma.

CD99 CKAP4

8.19e-06358220184665
Pubmed

Association of FOXA1 and EMT markers (Twist1 and E-cadherin) in breast cancer.

FOXA1 TWIST1

8.19e-06358230941644
Pubmed

The closely related transcription factors Sox4 and Sox11 function as survival factors during spinal cord development.

SOX4 SOX11

8.19e-06358220646169
Pubmed

The transcription factor prospero homeobox protein 1 is a direct target of SoxC proteins during developmental vertebrate neurogenesis.

SOX4 SOX11

8.19e-06358229749639
Pubmed

Expression of Sox4 and Sox11 is regulated by multiple mechanisms during retinal development.

SOX4 SOX11

8.19e-06358223313252
Pubmed

Class-C SOX transcription factors control GnRH gene expression via the intronic transcriptional enhancer.

SOX4 SOX11

8.19e-06358221527504
Pubmed

Sox4 links tumor suppression to accelerated aging in mice by modulating stem cell activation.

SOX4 SOX11 LORICRIN

8.69e-062458325043184
Pubmed

Zbtb20 modulates the sequential generation of neuronal layers in developing cortex.

FEZF2 BHLHE22 CUX1

9.86e-062558327282384
Pubmed

Conserved transcriptional regulation by BRN1 and BRN2 in neocortical progenitors drives mammalian neural specification and neocortical expansion.

FEZF2 POU3F3 CUX1

9.86e-062558339271675
Pubmed

Vsx1 Transiently Defines an Early Intermediate V2 Interneuron Precursor Compartment in the Mouse Developing Spinal Cord.

FOXD3 PRDM8 BHLHE22

1.11e-052658328082864
Pubmed

A Wnt7b-dependent pathway regulates the orientation of epithelial cell division and establishes the cortico-medullary axis of the mammalian kidney.

GSX1 FOXA1 FOXD1

1.11e-052658319060336
Pubmed

Histone methylation mediated by NSD1 is required for the establishment and maintenance of neuronal identities.

SP8 EMX1 CUX1

1.25e-052758337995181
Pubmed

Protooncogene Ski cooperates with the chromatin-remodeling factor Satb2 in specifying callosal neurons.

FEZF2 BHLHE22 CUX1

1.25e-052758322334647
Pubmed

An atlas of combinatorial transcriptional regulation in mouse and man.

SP8 ZNF384 JUNB GSX1 DACH1 SUZ12 EMX1 FOXA1 ZBTB7B

1.39e-0587758920211142
Pubmed

Abnormal neocortex arealization and Sotos-like syndrome-associated behavior in Setd2 mutant mice.

SP8 EMX1 CUX1

1.40e-052858333523829
Pubmed

Loss of BAF (mSWI/SNF) chromatin-remodeling ATPase Brg1 causes multiple malformations of cortical development in mice.

BHLHE22 POU3F3 EMX1

1.40e-052858335666215
Pubmed

The cellular and molecular landscape of hypothalamic patterning and differentiation from embryonic to late postnatal development.

SP8 FOXA1 FOXD1

1.40e-052858332868762
Pubmed

Temporal analysis of enhancers during mouse cerebellar development reveals dynamic and novel regulatory functions.

SOX11 HCN1 BHLHE22

1.40e-052858335942939
Pubmed

A novel role for Dbx1-derived Cajal-Retzius cells in early regionalization of the cerebral cortical neuroepithelium.

SP8 BHLHE22 EMX1

1.40e-052858320668538
Pubmed

Corticospinal neuron subpopulation-specific developmental genes prospectively indicate mature segmentally specific axon projection targeting.

FEZF2 EMX1

1.64e-05458234686320
Pubmed

Syngap1 Disruption Induced by Recombination between Inverted loxP Sites Is Associated with Hippocampal Interneuron Dysfunction.

EMX1 SYNGAP1

1.64e-05458237072176
Pubmed

miR-30a inhibits androgen-independent growth of prostate cancer via targeting MYBL2, FOXD1, and SOX4.

SOX4 FOXD1

1.64e-05458232294305
Pubmed

Mutually repressive interaction between Brn1/2 and Rorb contributes to the establishment of neocortical layer 2/3 and layer 4.

POU3F3 CUX1

1.64e-05458226951672
Pubmed

CDYL Deficiency Disrupts Neuronal Migration and Increases Susceptibility to Epilepsy.

EMX1 CUX1

1.64e-05458228076783
Pubmed

Sp8 and COUP-TF1 reciprocally regulate patterning and Fgf signaling in cortical progenitors.

SP8 EMX1

1.64e-05458223307639
Pubmed

SOXC and MiR17-92 gene expression profiling defines two subgroups with different clinical outcome in mantle cell lymphoma.

SOX4 SOX11

1.64e-05458226998831
Pubmed

Tangential Intrahypothalamic Migration of the Mouse Ventral Premamillary Nucleus and Fgf8 Signaling.

IRS4 FEZF2 FOXA1

1.91e-053158334095148
Pubmed

Sox11 gene disruption causes congenital anomalies of the kidney and urinary tract (CAKUT).

SOX11 POU3F3 FOXD1

1.91e-053158329459093
Pubmed

Selective cortical layering abnormalities and behavioral deficits in cortex-specific Pax6 knock-out mice.

FEZF2 EMX1 CUX1

2.11e-053258319571125
Pubmed

Distinct expression of select and transcriptome-wide isolated 3'UTRs suggests critical roles in development and transition states.

SOX4 SOX11 HNRNPA0

2.32e-053358333951080
Pubmed

Ctip1 Controls Acquisition of Sensory Area Identity and Establishment of Sensory Input Fields in the Developing Neocortex.

BHLHE22 EMX1 CUX1

2.32e-053358327100196
Pubmed

A genomic atlas of mouse hypothalamic development.

SOX4 SOX11 IRS4 FEZF2 FOXD1

2.41e-0520558520436479
Pubmed

The Nse5/6-like SIMC1-SLF2 complex localizes SMC5/6 to viral replication centers.

ZNF384 IRS4 DACH1 RBM15B HNRNPA0 MLLT6 CKAP4 CUX1 NUP153

2.70e-0595458936373674
Pubmed

DSCAM contributes to dendrite arborization and spine formation in the developing cerebral cortex.

FEZF2 CUX1

2.72e-05558223175819
Pubmed

SoxC transcription factors are essential for the development of the inner ear.

SOX4 SOX11

2.72e-05558226504244
Pubmed

Inter-axonal molecular crosstalk via Lumican proteoglycan sculpts murine cervical corticospinal innervation by distinct subpopulations.

FEZF2 EMX1

2.72e-05558236934325
Pubmed

Upregulation of SYNGAP1 expression in mice and human neurons by redirecting alternative splicing.

EMX1 SYNGAP1

2.72e-05558236917980
Pubmed

Mouse Mesenchyme forkhead 2 (Mf2): expression, DNA binding and induction by sonic hedgehog during somitogenesis.

FOXD2 FOXD1

2.72e-0555829510020
Pubmed

Identification of genes that restrict astrocyte differentiation of midgestational neural precursor cells.

SOX11 BHLHE22

2.72e-05558218640244
Pubmed

Gene silencing triggers polycomb repressive complex 2 recruitment to CpG islands genome wide.

SUZ12 RING1

2.72e-05558224999238
Pubmed

Caveolin1 Identifies a Specific Subpopulation of Cerebral Cortex Callosal Projection Neurons (CPN) Including Dual Projecting Cortical Callosal/Frontal Projection Neurons (CPN/FPN).

FEZF2 BHLHE22

2.72e-05558229379878
Pubmed

Synergistic activation of the tumor suppressor, HLJ1, by the transcription factors YY1 and activator protein 1.

JUNB DNAJB4

2.72e-05558217510411
Pubmed

The production of somatostatin interneurons in the olfactory bulb is regulated by the transcription factor sp8.

SP8 EMX1

2.72e-05558223894587
Pubmed

Reduced cognition in Syngap1 mutants is caused by isolated damage within developing forebrain excitatory neurons.

EMX1 SYNGAP1

2.72e-05558224945774
Pubmed

Celf4 controls mRNA translation underlying synaptic development in the prenatal mammalian neocortex.

POU3F3 EMX1 CUX1

2.77e-053558337758766
InteractionKRT24 interactions

KRT2 KRT3 KRT24 KRT79

1.75e-0554584int:KRT24
InteractionKRT13 interactions

KRT2 KRT3 FOXA1 ZBTB7B KRT79

2.08e-05116585int:KRT13
InteractionKRT20 interactions

KRT2 KRT3 KRT24 KRT79

3.24e-0563584int:KRT20
Cytoband7p21.2

SP8 TWIST1

8.56e-05115827p21.2
Cytoband12q13.13

KRT2 KRT3 KRT79

8.65e-056758312q13.13
GeneFamilyForkhead boxes

FOXD2 FOXD3 FOXA1 FOXF2 FOXD1

8.53e-0843475508
GeneFamilyKeratins, type II

KRT2 KRT3 KRT79

4.61e-0527473609
GeneFamilySRY-boxes

SOX4 SOX11

1.10e-0319472757
GeneFamilyAtaxins|Trinucleotide repeat containing

ZNF384 BHLHE22

1.91e-0325472775
CoexpressionMEISSNER_BRAIN_HCP_WITH_H3K4ME3_AND_H3K27ME3

SP8 PRDM8 GSX1 CDH22 IRS4 FEZF2 HCN1 BHLHE22 HS3ST6 EMX1 ZBTB7B FOXF2 FOXD1 ZNF503

6.50e-0810745814M1941
CoexpressionRIZ_ERYTHROID_DIFFERENTIATION_HEMGN

SOX4 POU3F3 FOXA1 CUX1

3.11e-0726584M7999
CoexpressionRIZ_ERYTHROID_DIFFERENTIATION_HEMGN

SOX4 POU3F3 FOXA1 CUX1

3.11e-0726584MM510
CoexpressionMEISSNER_NPC_HCP_WITH_H3K4ME2_AND_H3K27ME3

SP8 FOXD3 GSX1 NALF1 HCN1 HS3ST6 EMX1 FOXF2

1.00e-06350588M1949
CoexpressionMEISSNER_NPC_HCP_WITH_H3K4ME2_AND_H3K27ME3

SP8 FOXD3 GSX1 NALF1 HCN1 HS3ST6 EMX1 FOXF2

1.16e-06357588MM828
CoexpressionMIKKELSEN_NPC_HCP_WITH_H3K27ME3

SP8 FOXD3 GSX1 FEZF2 HCN1 HS3ST6 EMX1

1.09e-05345587M2009
CoexpressionMIKKELSEN_NPC_HCP_WITH_H3K27ME3

SP8 FOXD3 GSX1 FEZF2 HCN1 HS3ST6 EMX1

1.13e-05347587MM860
CoexpressionBENPORATH_SUZ12_TARGETS

FOXD2 FOXD3 GSX1 IRS4 FEZF2 CD99 BHLHE22 DACH1 EMX1 FOXA1 ZNF503

1.43e-0510355811M9898
CoexpressionBENPORATH_EED_TARGETS

FOXD2 FOXD3 GSX1 CNNM2 LRFN2 FEZF2 BHLHE22 DACH1 FOXF2 TWIST1 ZNF503

1.77e-0510595811M7617
CoexpressionBENPORATH_ES_WITH_H3K27ME3

FOXD2 FOXD3 GSX1 CNNM2 LRFN2 FEZF2 BHLHE22 DACH1 FOXF2 TWIST1 ZNF503

2.85e-0511155811M10371
CoexpressionMIKKELSEN_MCV6_HCP_WITH_H3K27ME3

FOXD3 CDH22 NALF1 FEZF2 HS3ST6 POU3F3 EMX1

5.00e-05438587M1954
CoexpressionMIKKELSEN_MCV6_HCP_WITH_H3K27ME3

FOXD3 CDH22 NALF1 FEZF2 HS3ST6 POU3F3 EMX1

5.15e-05440587MM832
CoexpressionGSE19401_PLN_VS_PEYERS_PATCH_FOLLICULAR_DC_UP

SOX4 CD99 PLCL2 HNRNPA0 FOXD1

7.38e-05196585M7666
CoexpressionRIZ_ERYTHROID_DIFFERENTIATION_HBZ

SOX4 POU3F3 CUX1

7.57e-0537583M802
CoexpressionRIZ_ERYTHROID_DIFFERENTIATION_HBZ

SOX4 POU3F3 CUX1

7.57e-0537583MM509
CoexpressionGSE15930_NAIVE_VS_48H_IN_VITRO_STIM_IFNAB_CD8_TCELL_UP

SOX4 SOX11 RETREG2 DNAJB4 CUX1

7.74e-05198585M3601
CoexpressionGSE9988_ANTI_TREM1_VS_ANTI_TREM1_AND_LPS_MONOCYTE_UP

HNRNPA0 CKAP4 ZNF503 KLHL26 RING1

7.93e-05199585M5848
CoexpressionGSE360_L_MAJOR_VS_B_MALAYI_HIGH_DOSE_MAC_UP

MMRN1 COL17A1 NALF1 VWA8 DACH1

8.12e-05200585M5247
CoexpressionGSE41176_WT_VS_TAK1_KO_ANTI_IGM_STIM_BCELL_1H_DN

KRT2 CDH22 DHX57 NBEA FOXF2

8.12e-05200585M9935
CoexpressionGSE6875_WT_VS_FOXP3_KO_TREG_UP

RETREG2 PLCL2 MLLT6 CKAP4 ZBTB7B

8.12e-05200585M6803
CoexpressionGSE17721_POLYIC_VS_PAM3CSK4_2H_BMDC_DN

KRT2 PLCL2 POU3F3 FOXA1 RAD23B

8.12e-05200585M3831
CoexpressionGSE2770_UNTREATED_VS_TGFB_AND_IL12_TREATED_ACT_CD4_TCELL_6H_DN

FOXD3 BHLHE22 RBM15B PPP1R3F NBEA

8.12e-05200585M6053
CoexpressionDESCARTES_FETAL_HEART_SATB2_LRRC7_POSITIVE_CELLS

SOX11 FEZF2 BHLHE22 POU3F3

1.24e-04115584M40201
CoexpressionMYLLYKANGAS_AMPLIFICATION_HOT_SPOT_12

MLLT6 SUZ12

2.61e-0411582M16845
CoexpressionMANNO_MIDBRAIN_NEUROTYPES_HDA1

SOX11 PRDM8 CDH22 NALF1 NBEA FOXA1 CCDC85A

2.96e-04584587M39068
CoexpressionMIKKELSEN_MEF_HCP_WITH_H3K27ME3

FOXD3 PRDM8 GSX1 FEZF2 HCN1 POU3F3 EMX1

3.18e-04591587M2019
CoexpressionMIKKELSEN_MEF_HCP_WITH_H3K27ME3

FOXD3 PRDM8 GSX1 FEZF2 HCN1 POU3F3 EMX1

3.51e-04601587MM866
CoexpressionAtlasDevelopingLowerUrinaryTract_e14.5_ urethra_emap-30892_top-relative-expression-ranked_200

SP8 IRS4 COL17A1 LORICRIN DACH1 FOXA1 CUX1 FOXF2

1.34e-08165578gudmap_developingLowerUrinaryTract_e14.5_ urethra_200
CoexpressionAtlasDevelopingLowerUrinaryTract_e14.5_ Genital tubercle F_emap-6706_top-relative-expression-ranked_500

SOX11 SP8 IRS4 COL17A1 DACH1 NBEA FOXA1 CUX1 FOXF2 TWIST1 RAD23B

1.57e-084285711gudmap_developingLowerUrinaryTract_e14.5_ Genital tubercle F_500
CoexpressionAtlasDevelopingLowerUrinaryTract_e14.5_ Genital tubercle M_emap-6706_top-relative-expression-ranked_500

SOX11 SP8 IRS4 COL17A1 DACH1 NBEA FOXA1 CUX1 FOXF2 TWIST1 RAD23B

1.61e-084295711gudmap_developingLowerUrinaryTract_e14.5_ Genital tubercle M_500
CoexpressionAtlasDevelopingLowerUrinaryTract_e14.5_ urethra_emap-30902_top-relative-expression-ranked_100

SP8 IRS4 LORICRIN FOXA1 CUX1 FOXF2

1.40e-0789576DevelopingLowerUrinaryTract_e14.5_ urethra_emap-30902_100
CoexpressionAtlasDevelopingLowerUrinaryTract_e14.5_ urethra_emap-30902_top-relative-expression-ranked_200

SP8 IRS4 COL17A1 LORICRIN FOXA1 CUX1 FOXF2

3.52e-07170577DevelopingLowerUrinaryTract_e14.5_ urethra_emap-30902_200
CoexpressionAtlasDevelopingLowerUrinaryTract_e14.5_ Genital tubercle_emap-6706_top-relative-expression-ranked_1000

SOX11 SP8 COL17A1 LORICRIN DACH1 NBEA SUZ12 FOXA1 CUX1 FOXF2 FOXD1 TWIST1

7.39e-077695712gudmap_developingLowerUrinaryTract_e14.5_ Genital tubercle_1000
CoexpressionAtlasDevelopingLowerUrinaryTract_e14.5_ Genital tubercle_emap-6706_top-relative-expression-ranked_500

SOX11 COL17A1 LORICRIN DACH1 NBEA CUX1 FOXF2 FOXD1 TWIST1

8.96e-07390579gudmap_developingLowerUrinaryTract_e14.5_ Genital tubercle_500
CoexpressionAtlasDevelopingLowerUrinaryTract_e14.5_ urethra_emap-30892_top-relative-expression-ranked_500

SP8 IRS4 COL17A1 LORICRIN DACH1 FOXA1 CUX1 FOXF2 TWIST1

1.28e-06407579gudmap_developingLowerUrinaryTract_e14.5_ urethra_500
CoexpressionAtlasDevelopingLowerUrinaryTract_e14.5_ urethra_emap-30902_top-relative-expression-ranked_500

SP8 IRS4 COL17A1 LORICRIN DACH1 FOXA1 CUX1 FOXF2 TWIST1

1.30e-06408579DevelopingLowerUrinaryTract_e14.5_ urethra_emap-30902_500
CoexpressionAtlasDevelopingLowerUrinaryTract_e14.5_ Genital tubercle M_emap-6706_top-relative-expression-ranked_1000

SOX11 SP8 IRS4 COL17A1 DACH1 POU3F3 NBEA FOXA1 CUX1 FOXF2 TWIST1 RAD23B

1.77e-068365712gudmap_developingLowerUrinaryTract_e14.5_ Genital tubercle M_1000
CoexpressionAtlasDevelopingLowerUrinaryTract_e14.5_ urethra_emap-30902_k-means-cluster#3_top-relative-expression-ranked_200

SP8 COL17A1 LORICRIN FOXA1

1.80e-0633574DevelopingLowerUrinaryTract_e14.5_ urethra_emap-30902_k3_200
CoexpressionAtlasDevelopingLowerUrinaryTract_e14.5_ urethra_emap-30892_top-relative-expression-ranked_100

SP8 IRS4 FOXA1 CUX1 FOXF2

3.44e-0686575gudmap_developingLowerUrinaryTract_e14.5_ urethra_100
CoexpressionAtlasDevelopingLowerUrinaryTract_e14.5_ urethra_emap-30892_k-means-cluster#4_top-relative-expression-ranked_200

SP8 COL17A1 LORICRIN FOXA1

3.58e-0639574gudmap_developingLowerUrinaryTract_e14.5_ urethra_200_k4
CoexpressionAtlasDevelopingLowerUrinaryTract_e13.5_bladder neck-urethr epithel_emap-30875_top-relative-expression-ranked_100

SP8 IRS4 COL17A1 LORICRIN FOXA1

3.64e-0687575gudmap_developingLowerUrinaryTract_e13.5_bladder neck-urethr epithel_100
CoexpressionAtlasDevelopingLowerUrinaryTract_e13.5_bladder neck-urethr epithel_emap-30875_top-relative-expression-ranked_200

SP8 IRS4 COL17A1 LORICRIN FOXA1 FOXF2

5.83e-06168576gudmap_developingLowerUrinaryTract_e13.5_bladder neck-urethr epithel_200
CoexpressionAtlasDevelopingLowerUrinaryTract_e14.5_ Genital tubercle F_emap-6706_top-relative-expression-ranked_200

SOX11 SP8 COL17A1 CUX1 FOXF2 TWIST1

6.03e-06169576gudmap_developingLowerUrinaryTract_e14.5_ Genital tubercle F_200
CoexpressionAtlasDevelopingLowerUrinaryTract_e14.5_ urethra_emap-30902_k-means-cluster#3_top-relative-expression-ranked_100

IRS4 LORICRIN FOXA1

6.54e-0614573DevelopingLowerUrinaryTract_e14.5_ urethra_emap-30902_k3_100
CoexpressionAtlasDevelopingLowerUrinaryTract_e14.5_ Genital tubercle M_emap-6706_top-relative-expression-ranked_200

SP8 COL17A1 CUX1 FOXF2 TWIST1 RAD23B

7.37e-06175576gudmap_developingLowerUrinaryTract_e14.5_ Genital tubercle M_200
CoexpressionAtlasDevelopingKidney_e15.5_anlage of loop of Henle_emap-31283_top-relative-expression-ranked_500

CNNM2 VWA8 DACH1 HS3ST6 POU3F3 SUZ12 CUX1 FOXD1

1.13e-05402578gudmap_developingKidney_e15.5_anlage of loop of Henle_500
CoexpressionAtlasDevelopingLowerUrinaryTract_e14.5_ Genital tubercle_emap-6706_k-means-cluster#2_top-relative-expression-ranked_200

SOX11 CUX1 FOXF2 TWIST1

1.34e-0554574gudmap_developingLowerUrinaryTract_e14.5_ Genital tubercle_200_k2
CoexpressionAtlasDevelopingLowerUrinaryTract_e14.5_ Genital tubercle F_emap-6706_top-relative-expression-ranked_1000

SOX11 SP8 IRS4 COL17A1 DACH1 NBEA FOXA1 CUX1 FOXF2 TWIST1 RAD23B

1.35e-058505711gudmap_developingLowerUrinaryTract_e14.5_ Genital tubercle F_1000
CoexpressionAtlaskidney single cell_e11.5_MetanephMesench_StemCellamp_k-means-cluster#3_top-relative-expression-ranked_500

SOX4 SOX11 NALF1 FOXD1 TWIST1

1.75e-05120575gudmap_kidney single cell_e11.5_MetanephMesench_Scamp_k3_500
CoexpressionAtlasDevelopingLowerUrinaryTract_e14.5_ urethra_emap-30902_k-means-cluster#1_top-relative-expression-ranked_500

SP8 COL17A1 LORICRIN FOXA1

2.17e-0561574DevelopingLowerUrinaryTract_e14.5_ urethra_emap-30902_k1_500
CoexpressionAtlasDevelopingGonad_e12.5_ovary_emap-28876_k-means-cluster#1_top-relative-expression-ranked_1000

MMRN1 SOX4 LORICRIN FOXD1 ZNF503

2.58e-05130575gudmap_developingGonad_e12.5_ovary_k1_1000
CoexpressionAtlasDevelopingLowerUrinaryTract_e14.5_ urethra_emap-30892_k-means-cluster#2_top-relative-expression-ranked_100

SP8 IRS4 FOXA1

3.13e-0523573gudmap_developingLowerUrinaryTract_e14.5_ urethra_100_k2
CoexpressionAtlasDevelopingLowerUrinaryTract_e14.5_ urethra_emap-30902_k-means-cluster#4_top-relative-expression-ranked_500

IRS4 DACH1 FOXF2 TWIST1

3.15e-0567574DevelopingLowerUrinaryTract_e14.5_ urethra_emap-30902_k4_500
CoexpressionAtlasDevelopingLowerUrinaryTract_e14.5_ Genital tubercle M_emap-6706_k-means-cluster#2_top-relative-expression-ranked_500

SOX11 IRS4 DACH1 TWIST1

4.19e-0572574gudmap_developingLowerUrinaryTract_e14.5_ Genital tubercle M_500_k2
CoexpressionAtlasEctoderm Differentiated Cells_vs_Mesoderm Day 5-Confounder_removed-fold2.0_adjp0.05

SOX11 SP8 CNNM2 IRS4 FEZF2 DACH1 PPP1R3F DNAJB4 NBEA ZNF503 SYNGAP1

4.44e-059675711PCBC_ratio_ECTO_vs_MESO-5_cfr-2X-p05
CoexpressionAtlasDevelopingLowerUrinaryTract_e14.5_ Genital tubercle F_emap-6706_k-means-cluster#4_top-relative-expression-ranked_500

SOX11 DACH1 CUX1 TWIST1

4.92e-0575574gudmap_developingLowerUrinaryTract_e14.5_ Genital tubercle F_500_k4
CoexpressionAtlasDevelopingLowerUrinaryTract_e14.5_ urethra_emap-30892_top-relative-expression-ranked_1000

SP8 IRS4 COL17A1 VWA8 LORICRIN DACH1 FOXA1 CUX1 FOXF2 TWIST1

5.03e-058065710gudmap_developingLowerUrinaryTract_e14.5_ urethra_1000
CoexpressionAtlasDevelopingKidney_e15.5_Pelvic Mesenchyme_emap-8241_top-relative-expression-ranked_1000

MMRN1 VWA8 BHLHE22 DACH1 HS3ST6 POU3F3 SUZ12 C4orf54 CUX1 FOXD1

5.19e-058095710gudmap_developingKidney_e15.5_Pelvic Mesenchyme_1000
CoexpressionAtlasDevelopingLowerUrinaryTract_e14.5_ urogenital sinus_emap-5517_top-relative-expression-ranked_1000

SOX4 SOX11 SP8 COL17A1 LORICRIN HCN1 DACH1 FOXA1 CUX1 FOXF2

5.69e-058185710gudmap_developingLowerUrinaryTract_e14.5_ urogenital sinus_1000
CoexpressionAtlasDevelopingLowerUrinaryTract_e14.5_ urogenital sinus_emap-6689_k-means-cluster#1_top-relative-expression-ranked_500

SP8 LORICRIN FOXA1

5.73e-0528573DevelopingLowerUrinaryTract_e14.5_ urogenital sinus_emap-6689_k1_500
CoexpressionAtlasDevelopingLowerUrinaryTract_e14.5_ urethra_emap-30892_k-means-cluster#1_top-relative-expression-ranked_500

SP8 COL17A1 LORICRIN FOXA1

5.74e-0578574gudmap_developingLowerUrinaryTract_e14.5_ urethra_500_k1
CoexpressionAtlasDevelopingLowerUrinaryTract_e14.5_ urogenital sinus_emap-5517_k-means-cluster#5_top-relative-expression-ranked_1000

SP8 COL17A1 LORICRIN FOXA1

5.74e-0578574gudmap_developingLowerUrinaryTract_e14.5_ urogenital sinus_1000_k5
CoexpressionAtlasDevelopingLowerUrinaryTract_e14.5_ Genital tubercle_emap-6706_top-relative-expression-ranked_200

SOX11 COL17A1 CUX1 FOXF2 TWIST1

6.37e-05157575gudmap_developingLowerUrinaryTract_e14.5_ Genital tubercle_200
CoexpressionAtlasDevelopingLowerUrinaryTract_e14.5_ Genital tubercle F_emap-6706_top-relative-expression-ranked_100

COL17A1 CUX1 FOXF2 TWIST1

8.04e-0585574DevelopingLowerUrinaryTract_e14.5_ Genital tubercle F_emap-6706_100
CoexpressionAtlascerebral cortex

SOX11 CDH22 LRFN2 NALF1 FEZF2 HCN1 BHLHE22 PPP1R3F POU3F3 NBEA EMX1 CCDC85A SYNGAP1

8.21e-0514285713cerebral cortex
CoexpressionAtlasDevelopingLowerUrinaryTract_e14.5_ Genital tubercle M_emap-6706_k-means-cluster#5_top-relative-expression-ranked_500

SP8 COL17A1 FOXA1

9.45e-0533573gudmap_developingLowerUrinaryTract_e14.5_ Genital tubercle M_500_k5
CoexpressionAtlaskidney single cell_e11.5_MetanephMesench_StemCellamp_k-means-cluster#2_top-relative-expression-ranked_1000

SOX4 SOX11 NALF1 FOXD1 TWIST1

1.09e-04176575gudmap_kidney single cell_e11.5_MetanephMesench_Scamp_k2_1000
CoexpressionAtlasDevelopingLowerUrinaryTract_e14.5_ Genital tubercle M_emap-6706_top-relative-expression-ranked_100

COL17A1 CUX1 FOXF2 TWIST1

1.09e-0492574gudmap_developingLowerUrinaryTract_e14.5_ Genital tubercle M_100
CoexpressionAtlasDevelopingKidney_e15.5_Pelvic Mesenchyme_emap-8241_top-relative-expression-ranked_500

MMRN1 DACH1 HS3ST6 SUZ12 C4orf54 CUX1 FOXD1

1.13e-04412577gudmap_developingKidney_e15.5_Pelvic Mesenchyme_500
CoexpressionAtlasDevelopingLowerUrinaryTract_e14.5_ urogenital sinus_emap-6689_top-relative-expression-ranked_200

SP8 DACH1 FOXA1 CUX1 FOXF2

1.15e-04178575DevelopingLowerUrinaryTract_e14.5_ urogenital sinus_emap-6689_200
CoexpressionAtlasDevelopingKidney_e15.5_stage III -IV renal corpusc_emap-27945_top-relative-expression-ranked_500

FOXD2 VWA8 DACH1 HS3ST6 POU3F3 CUX1 FOXD1

1.16e-04414577gudmap_developingKidney_e15.5_stage III -IV renal corpusc_500
CoexpressionAtlasEB amniotic fluid MSC_vs_EB blastocyst-Confounder_removed-fold2.0_adjp0.05

SOX4 SOX11 SP8 JUNB COL17A1 FEZF2 DACH1 POU3F3 NBEA

1.27e-04727579PCBC_ratio_EB amniotic fluid MSC_vs_EB blastocyst_cfr-2X-p05
CoexpressionAtlasFacebaseRNAseq_e9.5_Maxillary Arch_top-relative-expression-ranked_100

FOXD2 DACH1 HNRNPA0 POU3F3

1.34e-0497574Facebase_RNAseq_e9.5_Maxillary Arch_100
CoexpressionAtlasDevelopingGonad_e11.5_ovary + mesonephros_emap-3226_k-means-cluster#2_top-relative-expression-ranked_200

MMRN1 LORICRIN FOXD1

1.45e-0438573gudmap_developingGonad_e11.5_ovary + mesonephros_k2_200
CoexpressionAtlasFacebaseRNAseq_e8.5_Floor Plate_top-relative-expression-ranked_100

IRS4 FEZF2 FOXA1 FOXD1

1.45e-0499574Facebase_RNAseq_e8.5_Floor Plate_100
CoexpressionAtlasdev gonad_e11.5_F_GonMes_Sma_k-means-cluster#2_top-relative-expression-ranked_200

DNAJB4 FOXD1 TWIST1

1.82e-0441573gudmap_dev gonad_e11.5_F_GonMes_Sma_k2_200
CoexpressionAtlasDevelopingKidney_e15.5_Proximal Tubules_emap-28005_k-means-cluster#3_top-relative-expression-ranked_200

POU3F3 CUX1

1.96e-048572gudmap_developingKidney_e15.5_Proximal Tubules_200_k3
CoexpressionAtlasDevelopingLowerUrinaryTract_e14.5_ Genital tubercle_emap-6706_k-means-cluster#5_top-relative-expression-ranked_1000

SP8 COL17A1 LORICRIN FOXA1

2.03e-04108574gudmap_developingLowerUrinaryTract_e14.5_ Genital tubercle_1000_k5
CoexpressionAtlasDevelopingLowerUrinaryTract_e14.5_ urethra_emap-30892_k-means-cluster#5_top-relative-expression-ranked_1000

SP8 COL17A1 VWA8 FOXA1

2.03e-04108574gudmap_developingLowerUrinaryTract_e14.5_ urethra_1000_k5
CoexpressionAtlasskin

KRT2 KRT3 CDH22 COL17A1 LORICRIN HS3ST6 KRT79

2.10e-04456577skin
CoexpressionAtlasFacebaseRNAseq_e10.5_Neural Epithelium Flanking Eminence_top-relative-expression-ranked_2500_k-means-cluster#3

BOD1 FNDC3B IRS4 FOXA1 FOXD1 ZNF503

2.67e-04334576Facebase_RNAseq_e10.5_Neural Epithelium Flanking Eminence_2500_K3
CoexpressionAtlasFacebaseRNAseq_e10.5_Neural Epithelium Flanking Eminence_top-relative-expression-ranked_1000

SOX11 IRS4 FEZF2 DACH1 POU3F3 FOXA1 CUX1 RIC3 FOXD1 ZNF503

2.70e-049895710Facebase_RNAseq_e10.5_Neural Epithelium Flanking Eminence_1000
CoexpressionAtlasDevelopingLowerUrinaryTract_e14.5_ urogenital sinus_emap-5517_k-means-cluster#5_top-relative-expression-ranked_500

SP8 LORICRIN FOXA1

2.73e-0447573gudmap_developingLowerUrinaryTract_e14.5_ urogenital sinus_500_k5
CoexpressionAtlasFacebaseRNAseq_e8.5_Paraxial Mesoderm_top-relative-expression-ranked_500_k-means-cluster#1

FOXD3 IRS4 FOXD1

2.73e-0447573Facebase_RNAseq_e8.5_Paraxial Mesoderm_500_K1
CoexpressionAtlasDevelopingLowerUrinaryTract_e14.5_ urethra_emap-30902_top-relative-expression-ranked_1000

SP8 IRS4 COL17A1 LORICRIN DACH1 FOXA1 CUX1 FOXF2 TWIST1

2.74e-04806579DevelopingLowerUrinaryTract_e14.5_ urethra_emap-30902_1000
CoexpressionAtlasDevelopingLowerUrinaryTract_e14.5_ Genital tubercle_emap-6706_k-means-cluster#5_top-relative-expression-ranked_500

SOX11 DACH1 NBEA FOXF2 TWIST1

2.89e-04217575gudmap_developingLowerUrinaryTract_e14.5_ Genital tubercle_500_k5
CoexpressionAtlasDevelopingLowerUrinaryTract_e14.5_ urethra_emap-30902_k-means-cluster#1_top-relative-expression-ranked_1000

SP8 COL17A1 LORICRIN FOXA1

3.04e-04120574DevelopingLowerUrinaryTract_e14.5_ urethra_emap-30902_k1_1000
CoexpressionAtlasDevelopingLowerUrinaryTract_adult_ureter_emap-29479_k-means-cluster#4_top-relative-expression-ranked_100

SP8 COL17A1

3.14e-0410572gudmap_developingLowerUrinaryTract_adult_ureter_100_k4
CoexpressionAtlasDevelopingKidney_e15.5_ureter tip_flank cortic collct_emap-27752_k-means-cluster#4_top-relative-expression-ranked_200

DACH1 POU3F3 CUX1

3.49e-0451573gudmap_developingKidney_e15.5_ureter tip_flank cortic collct_200_k4
CoexpressionAtlasDevelopingKidney_e15.5_stage III -IV renal corpusc_emap-27945_k-means-cluster#5_top-relative-expression-ranked_1000

FNDC3B VWA8 DACH1 POU3F3 CUX1

3.49e-04226575gudmap_developingKidney_e15.5_stage III -IV renal corpusc_1000_k5
CoexpressionAtlasFacebaseRNAseq_e10.5_Neural Epithelium Flanking Eminence_top-relative-expression-ranked_500

IRS4 FEZF2 DACH1 POU3F3 FOXA1 RIC3 FOXD1

3.59e-04498577Facebase_RNAseq_e10.5_Neural Epithelium Flanking Eminence_500
CoexpressionAtlasratio_EmbryoidBody_vs_StemCell_top-relative-expression-ranked_500

MMRN1 DACH1 POU3F3 FOXA1 FOXF2 TWIST1 ZNF503

3.59e-04498577PCBC_ratio_EB_vs_SC_500
CoexpressionAtlasDevelopingLowerUrinaryTract_e14.5_ urethra_emap-30892_k-means-cluster#2_top-relative-expression-ranked_200

IRS4 DACH1 FOXF2

3.91e-0453573gudmap_developingLowerUrinaryTract_e14.5_ urethra_200_k2
CoexpressionAtlasEctoderm Differentiated Cells_vs_Pluripotent Stem Cells-Confounder_removed-fold2.0_adjp0.05

SOX11 SP8 IRS4 FEZF2 CD99 DACH1 PPP1R3F DNAJB4 MLLT6 CKAP4 ZNF503 RING1

4.32e-0414665712PCBC_ratio_ECTO_vs_SC_cfr-2X-p05
CoexpressionAtlasDevelopingLowerUrinaryTract_e14.5_ urogenital sinus_emap-6689_k-means-cluster#4_top-relative-expression-ranked_1000

SP8 LORICRIN FOXA1

4.60e-0456573DevelopingLowerUrinaryTract_e14.5_ urogenital sinus_emap-6689_k4_1000
CoexpressionAtlasDevelopingLowerUrinaryTract_e14.5_ urethra_emap-30892_k-means-cluster#2_top-relative-expression-ranked_500

IRS4 DACH1 FOXF2 TWIST1

5.03e-04137574gudmap_developingLowerUrinaryTract_e14.5_ urethra_500_k2
CoexpressionAtlasDevelopingLowerUrinaryTract_e14.5_ Genital tubercle M_emap-6706_k-means-cluster#4_top-relative-expression-ranked_1000

SP8 COL17A1 FOXA1

5.10e-0458573gudmap_developingLowerUrinaryTract_e14.5_ Genital tubercle M_1000_k4
CoexpressionAtlasEctoderm Differentiated Cells_vs_Endoderm Differentiated Cells-Confounder_removed-fold2.0_adjp0.05

SOX11 SP8 CNNM2 IRS4 FEZF2 DACH1 PPP1R3F ZNF503 SYNGAP1 RING1

5.22e-0410755710PCBC_ratio_ECTO_vs_DE_cfr-2X-p05
CoexpressionAtlasDevelopingLowerUrinaryTract_e13.5_bladder neck-urethr epithel_emap-30875_k-means-cluster#3_top-relative-expression-ranked_200

IRS4 LORICRIN FOXA1

5.36e-0459573gudmap_developingLowerUrinaryTract_e13.5_bladder neck-urethr epithel_200_k3
CoexpressionAtlaskidney_P2_CapMes_Crym_k-means-cluster#1_top-relative-expression-ranked_200

DACH1 FOXD1

5.42e-0413572gudmap_kidney_P2_CapMes_Crym_k1_200
CoexpressionAtlasFacebaseRNAseq_e10.5_Neural Epithelium Flanking Eminence_top-relative-expression-ranked_500_k-means-cluster#5

IRS4 FOXA1 FOXD1

5.91e-0461573Facebase_RNAseq_e10.5_Neural Epithelium Flanking Eminence_500_K5
CoexpressionAtlaskidney_P4_CapMesRenVes_Crym_k-means-cluster#1_top-relative-expression-ranked_500

FNDC3B DACH1 FOXD1

5.91e-0461573gudmap_kidney_P4_CapMesRenVes_Crym_k1_500
CoexpressionAtlaskidney_P3_CapMes_Crym_k-means-cluster#3_top-relative-expression-ranked_200

DACH1 FOXD1

6.31e-0414572gudmap_kidney_P3_CapMes_Crym_k3_200
CoexpressionAtlasDevelopingLowerUrinaryTract_e14.5_ urethra_emap-30902_k-means-cluster#4_top-relative-expression-ranked_1000

IRS4 DACH1 FOXF2 TWIST1

6.55e-04147574DevelopingLowerUrinaryTract_e14.5_ urethra_emap-30902_k4_1000
CoexpressionAtlasDevelopingKidney_e15.5_Medullary collecting duct_emap-28063_k-means-cluster#4_top-relative-expression-ranked_1000

VWA8 DACH1 POU3F3 SUZ12 CUX1

6.71e-04261575gudmap_developingKidney_e15.5_Medullary collecting duct_1000_k4
CoexpressionAtlasDevelopingLowerUrinaryTract_e13.5_bladder neck-urethr epithel_emap-30875_top-relative-expression-ranked_500

SP8 IRS4 COL17A1 LORICRIN FOXA1 FOXF2

7.03e-04401576gudmap_developingLowerUrinaryTract_e13.5_bladder neck-urethr epithel_500
CoexpressionAtlasfacebase_RNAseq_e9.5_MaxArch_2500_K4

FOXD2 MMRN1 SOX11 PLCL2 DACH1 RBM15B POU3F3 CCDC85A FOXD1 TWIST1

7.43e-0411255710facebase_RNAseq_e9.5_MaxArch_2500_K4
CoexpressionAtlasDevelopingLowerUrinaryTract_e14.5_ Genital tubercle M_emap-6706_k-means-cluster#3_top-relative-expression-ranked_200

CUX1 FOXF2 RAD23B

7.44e-0466573gudmap_developingLowerUrinaryTract_e14.5_ Genital tubercle M_200_k3
CoexpressionAtlasfacebase_RNAseq_e10.5_Emin_LatNas_2500_K4

SOX11 DACH1 POU3F3

8.47e-0469573facebase_RNAseq_e10.5_Emin_LatNas_2500_K4
CoexpressionAtlasDevelopingLowerUrinaryTract_e13.5_bladder mesenchyme_emap-3087_top-relative-expression-ranked_500

JUNB HCN1 SUZ12 CKAP4 CUX1 FOXF2

8.94e-04420576gudmap_developingLowerUrinaryTract_e13.5_bladder mesenchyme_500
CoexpressionAtlasDevelopingKidney_e15.5_Medullary collecting duct_emap-28063_top-relative-expression-ranked_200

POU3F3 FOXA1 CUX1 FOXD1

8.99e-04160574gudmap_developingKidney_e15.5_Medullary collecting duct_200
CoexpressionAtlasdev gonad_e11.5_F_GonadVasMes_Flk_top-relative-expression-ranked_200

LORICRIN DNAJB4 FOXD1 TWIST1

9.20e-04161574gudmap_dev gonad_e11.5_F_GonadVasMes_Flk_200
CoexpressionAtlasDevelopingGonad_e11.5_ovary + mesonephros_emap-3226_top-relative-expression-ranked_200

MMRN1 LORICRIN FOXD1 RAD23B

9.20e-04161574gudmap_developingGonad_e11.5_ovary + mesonephros_200
CoexpressionAtlaskidney_e15.5_Podocyte_MafB_k-means-cluster#1_top-relative-expression-ranked_100

DACH1 FOXD1

9.38e-0417572gudmap_kidney_e15.5_Podocyte_MafB_k1_100
CoexpressionAtlasDevelopingLowerUrinaryTract_e13.5_bladder mesenchyme_emap-3087_k-means-cluster#5_top-relative-expression-ranked_100

CUX1 FOXF2

9.38e-0417572gudmap_developingLowerUrinaryTract_e13.5_bladder mesenchyme_100_k5
CoexpressionAtlasFacebaseRNAseq_e8.5_Paraxial Mesoderm_top-relative-expression-ranked_1000_k-means-cluster#3

FOXD3 IRS4 FOXD1

9.59e-0472573Facebase_RNAseq_e8.5_Paraxial Mesoderm_1000_K3
CoexpressionAtlasDevelopingKidney_e15.5_cortic collect duct_emap-28132_k-means-cluster#4_top-relative-expression-ranked_500

VWA8 DACH1 POU3F3 CUX1

9.63e-04163574gudmap_developingKidney_e15.5_cortic collect duct_500_k4
CoexpressionAtlasDevelopingLowerUrinaryTract_e14.5_ urogenital sinus_emap-6689_top-relative-expression-ranked_500

SP8 LORICRIN DACH1 FOXA1 CUX1 FOXF2

9.74e-04427576DevelopingLowerUrinaryTract_e14.5_ urogenital sinus_emap-6689_500
CoexpressionAtlasDevelopingLowerUrinaryTract_e14.5_ Genital tubercle F_emap-6706_k-means-cluster#2_top-relative-expression-ranked_1000

SP8 COL17A1 FOXA1

9.98e-0473573gudmap_developingLowerUrinaryTract_e14.5_ Genital tubercle F_1000_k2
CoexpressionAtlasDevelopingKidney_e13.5_podocyte cells_emap-27773_top-relative-expression-ranked_500

MMRN1 DACH1 HS3ST6 C4orf54 CUX1 FOXD1

1.02e-03431576gudmap_developingKidney_e13.5_podocyte cells_500
CoexpressionAtlasDevelopingKidney_e15.5_cortic collect duct_emap-28132_top-relative-expression-ranked_1000

VWA8 BHLHE22 DACH1 POU3F3 SUZ12 FOXA1 CUX1 FOXD1

1.02e-03774578gudmap_developingKidney_e15.5_cortic collect duct_1000
CoexpressionAtlasDevelopingLowerUrinaryTract_e14.5_ urogenital sinus_emap-5517_top-relative-expression-ranked_200

SP8 FOXA1 CUX1 FOXF2

1.03e-03166574gudmap_developingLowerUrinaryTract_e14.5_ urogenital sinus_200
CoexpressionAtlasDevelopingLowerUrinaryTract_e14.5_ Genital tubercle F_emap-6706_k-means-cluster#2_top-relative-expression-ranked_500

SP8 COL17A1

1.05e-0318572gudmap_developingLowerUrinaryTract_e14.5_ Genital tubercle F_500_k2
CoexpressionAtlasDevelopingLowerUrinaryTract_e14.5_ urogenital sinus_emap-6689_k-means-cluster#4_top-relative-expression-ranked_200

SP8 FOXA1

1.05e-0318572DevelopingLowerUrinaryTract_e14.5_ urogenital sinus_emap-6689_k4_200
CoexpressionAtlasDevelopingLowerUrinaryTract_e14.5_ bladder_emap-6668_top-relative-expression-ranked_200

HCN1 FOXA1 CUX1 FOXF2

1.10e-03169574DevelopingLowerUrinaryTract_e14.5_ bladder_emap-6668_200
CoexpressionAtlasFacebaseRNAseq_e10.5_Neural Epithelium Flanking Eminence_top-relative-expression-ranked_1000_k-means-cluster#3

IRS4 FOXA1 FOXD1 ZNF503

1.10e-03169574Facebase_RNAseq_e10.5_Neural Epithelium Flanking Eminence_1000_K3
CoexpressionAtlasDevelopingKidney_e13.5_podocyte cells_emap-27773_top-relative-expression-ranked_200

MMRN1 HS3ST6 C4orf54 FOXD1

1.13e-03170574gudmap_developingKidney_e13.5_podocyte cells_200
ToppCellHippocampus|World / BrainAtlas - Mouse McCarroll V32

KRT2 PRDM8 LRFN2 FEZF2 HCN1 BHLHE22 EMX1 KRT79

7.58e-11176588f120a703f6d2f2d5f55eae1aea2e6382a485828f
ToppCellrenal_cortex_nuclei-Renal_AKI_(acute_kidney_injury)-Epithelial-Distal_tubule_epithelial_cell-kidney_distal_convoluted_tubule_epithelial_cell-Degenerative_Distal_Convoluted_Tubule_Cell|Renal_AKI_(acute_kidney_injury) / Celltypes from Cells and Nuclei per compartment and clinical group

CNNM2 NALF1 DACH1 POU3F3 EMX1 FOXA1

1.09e-07175586787ac1a12cda10af5c8830471702a4cbaf43e79e
ToppCell5'-GW_trimst-1.5-LargeIntestine-Mesenchymal|GW_trimst-1.5 / Celltypes from developing, pediatric, Crohn's, & adult GI tract

SOX4 JUNB CD99 HNRNPA0 DNAJB4 ZNF503

2.19e-071975865f6fce382f273e789ffbb75b63e9b4e87519918e
ToppCellBrain_organoid-organoid_Kanton_Nature-Organoid-2M-IPC_like|Organoid-2M / Sample Type, Dataset, Time_group, and Cell type.

SOX4 SOX11 PRDM8 FEZF2 BHLHE22 EMX1

2.25e-071985866d12ecaa9532c134d9c4562534dcb59a6420b4d3
ToppCellBrain_organoid-organoid_Kanton_Nature-Organoid-2M-IPC_like-IPs_and_early_cortical_neurons|Organoid-2M / Sample Type, Dataset, Time_group, and Cell type.

SOX4 SOX11 PRDM8 FEZF2 BHLHE22 EMX1

2.25e-071985867943e4f67c3d6efb5c8b00aa0ff3cfe7be10c48d
ToppCellNon-neuronal-Non-dividing-Radial_Glia-early|World / Primary Cells by Cluster

BOD1 JUNB CD99 DACH1 EMX1 RAD23B

2.32e-07199586549391e7a4285da1c0e366654530bcf1cd33fbae
ToppCellNon-neuronal-Non-dividing-Radial_Glia-early-40|World / Primary Cells by Cluster

BOD1 JUNB CD99 DACH1 EMX1 RAD23B

2.32e-0719958623625d757173bdd35a51c7919ff4b588168d2553
ToppCellBrain_organoid-organoid_Tanaka_cellReport-3m|organoid_Tanaka_cellReport / Sample Type, Dataset, Time_group, and Cell type.

SOX4 SOX11 PRDM8 FEZF2 BHLHE22 EMX1

2.39e-07200586e4f0bb57be1112869c7068d0a789c2b802a442dd
ToppCellBrain_organoid-organoid_Kanton_Nature-Organoid-4M-Neuronal-cortical_neurons_2|Organoid-4M / Sample Type, Dataset, Time_group, and Cell type.

PRDM8 FEZF2 BHLHE22 NBEA EMX1 RIC3

2.39e-072005860cb0755a101ec655359d051d6a8807408d727c55
ToppCellrenal_cortex_nuclei-Renal_AKI_(acute_kidney_injury)-Epithelial-Distal_tubule_epithelial_cell-kidney_distal_convoluted_tubule_epithelial_cell-Distal_Convoluted_Tubule_Cell_Type_1|Renal_AKI_(acute_kidney_injury) / Celltypes from Cells and Nuclei per compartment and clinical group

FNDC3B CNNM2 NALF1 DACH1 EMX1

4.75e-06189585975c0f079903ae36b0ffa54e86294d42ec7697de
ToppCellrenal_cortex_nuclei-Renal_AKI_(acute_kidney_injury)-Epithelial-Distal_tubule_epithelial_cell-kidney_distal_convoluted_tubule_epithelial_cell|Renal_AKI_(acute_kidney_injury) / Celltypes from Cells and Nuclei per compartment and clinical group

FNDC3B CNNM2 NALF1 DACH1 EMX1

4.75e-061895857eb8f5a951e80f1cfac4d7c9eb169f4eb100c917
ToppCell5'-GW_trimst-2-LargeIntestine-Mesenchymal-immature_mesenchymal_cell-Mesoderm_2_(ZEB2+)|GW_trimst-2 / Celltypes from developing, pediatric, Crohn's, & adult GI tract

SOX4 CD99 CKAP4 C4orf54 ZNF503

5.12e-06192585f053b89bfd6048c227667ff01c38df7c51d8a496
ToppCelldroplet-Kidney-nan-18m-Epithelial-Epcam_____kidney_distal_convoluted_tubule_epithelial_cell|Kidney / Skin_Bladder_Kidney_Mammary_Gland - method, tissue, subtissue, age, lineage, cell ontology and free annotation

SOX4 CNNM2 DACH1 POU3F3 EMX1

5.12e-061925856fb56d062c35617b18b927704bf5fba894faed81
ToppCellkidney_cells-Renal_AKI_(acute_kidney_injury)-Epithelial-Distal_tubule_epithelial_cell-kidney_distal_convoluted_tubule_epithelial_cell|Renal_AKI_(acute_kidney_injury) / Celltypes from Cells and Nuclei per compartment and clinical group

CNNM2 DACH1 POU3F3 EMX1 ZNF503

5.66e-06196585f40d10ea7714067585493fdc89744714aa427de8
ToppCellkidney_cells-Renal_AKI_(acute_kidney_injury)-Epithelial-Distal_tubule_epithelial_cell-kidney_distal_convoluted_tubule_epithelial_cell-Degenerative_Distal_Convoluted_Tubule_Cell|Renal_AKI_(acute_kidney_injury) / Celltypes from Cells and Nuclei per compartment and clinical group

CNNM2 DACH1 POU3F3 EMX1 ZNF503

5.66e-06196585b8350340d86e4524e9616a427e7f2e116a6fb3be
ToppCell5'-GW_trimst-1.5-LargeIntestine-Mesenchymal-fibroblastic|GW_trimst-1.5 / Celltypes from developing, pediatric, Crohn's, & adult GI tract

SOX4 JUNB CD99 DNAJB4 ZNF503

5.81e-0619758505e303fff86db31f7b742324c64980eb2b9cff9a
ToppCellBrain_organoid-organoid_Velasco_nature-6_mon-Neuronal-Immature_CPNs|6_mon / Sample Type, Dataset, Time_group, and Cell type.

SOX4 SOX11 BHLHE22 POU3F3 RIC3

5.95e-061985854e598aab92141e7d32ec963291ddeed14a21beba
ToppCell5'-GW_trimst-2-LargeIntestine-Mesenchymal-fibroblastic|GW_trimst-2 / Celltypes from developing, pediatric, Crohn's, & adult GI tract

SOX4 DACH1 CKAP4 FOXF2 ZNF503

5.95e-0619858575d104eead681f6bf47c4dd24913cc768c9a1717
ToppCell5'-GW_trimst-1.5-LargeIntestine-Mesenchymal-fibroblastic-Stromal_3_(C7+)|GW_trimst-1.5 / Celltypes from developing, pediatric, Crohn's, & adult GI tract

SOX4 JUNB CD99 DNAJB4 ZNF503

5.95e-06198585cfe2d52b19a1b4c2c2076fa1d5a69baf21a49623
ToppCell5'-GW_trimst-1.5-LargeIntestine-Mesenchymal-immature_mesenchymal_cell-Mesoderm_2_(ZEB2+)|GW_trimst-1.5 / Celltypes from developing, pediatric, Crohn's, & adult GI tract

CD99 HNRNPA0 DNAJB4 FOXF2 ZNF503

6.10e-06199585a95aa72387c9558e0316898eaa9df4de8932af1b
ToppCell3'-GW_trimst-1|3' / Celltypes from developing, pediatric, Crohn's, & adult GI tract

SOX4 SOX11 BOD1 HNRNPA0 ZNF503

6.10e-06199585ecfb6381e2971a3e355e661a6df0021914485e74
ToppCell5'-GW_trimst-2-LargeIntestine-Mesenchymal|GW_trimst-2 / Celltypes from developing, pediatric, Crohn's, & adult GI tract

SOX4 CD99 CKAP4 FOXF2 ZNF503

6.10e-061995853d8c76e3d05acf72a35ca755b51579fc3ae63562
ToppCellwk_08-11|World / Celltypes from embryonic and fetal-stage human lung

SOX11 BOD1 HNRNPA0 CKAP4 ZNF503

6.25e-06200585aa35c33762880a5e030a7e691c425524f7dbff8a
ToppCellFetal_brain-organoid_Tanaka_cellReport-GW26-Neuronal|GW26 / Sample Type, Dataset, Time_group, and Cell type.

SOX4 SOX11 PRDM8 BHLHE22 NBEA

6.25e-06200585306926cb7a847871641f02e03d52dc56fd55711c
ToppCellFetal_brain-organoid_Tanaka_cellReport-GW26-Neuronal-Cortical_neuron|GW26 / Sample Type, Dataset, Time_group, and Cell type.

SOX4 SOX11 PRDM8 BHLHE22 NBEA

6.25e-062005855b3df61ff421846ef4cabf1bd5355534c8b95509
ToppCellBrain_organoid-organoid_Tanaka_cellReport-10w-Neuronal-Neuron|10w / Sample Type, Dataset, Time_group, and Cell type.

FOXD2 SOX4 SOX11 PRDM8 DACH1

6.25e-06200585332905a686356cd1e024d40679be98e9d8b1b5e8
ToppCellBrain_organoid-organoid_Tanaka_cellReport-2m-Neuronal-Neuron|2m / Sample Type, Dataset, Time_group, and Cell type.

SOX4 SOX11 DACH1 HNRNPA0 EMX1

6.25e-06200585a581f1704a87b0390e1e2ff85053367d85247755
ToppCellBrain_organoid-organoid_Tanaka_cellReport-6m-Neuronal-Neuron|6m / Sample Type, Dataset, Time_group, and Cell type.

SOX4 SOX11 PRDM8 DACH1 EMX1

6.25e-06200585b5019b9d48f32cffd4645a5c0f3e0ac504ea8019
ToppCellEntopeduncular-Neuronal-Excitatory-eN1(Slc17a7)-eN1_1-Excitatory_Neuron.Slc17a7.Zbtb20_(Ventral_Hippocampus)|Entopeduncular / BrainAtlas - Mouse McCarroll V32

KRT2 PRDM8 EMX1 C4orf54

1.30e-05110584ff196c71aa2a21cdd812958bd163fa6b91bd2352
ToppCellEntopeduncular-Neuronal-Excitatory-eN1(Slc17a7)-eN1_1|Entopeduncular / BrainAtlas - Mouse McCarroll V32

KRT2 PRDM8 EMX1 C4orf54

1.30e-05110584438bf761ab0a25e3dc9244c23ae2c2d68a169c7f
ToppCellEntopeduncular-Neuronal-Excitatory-eN1(Slc17a7)-eN1_1-Excitatory_Neuron.Slc17a7.Zbtb20_(Ventral_Hippocampus)-|Entopeduncular / BrainAtlas - Mouse McCarroll V32

KRT2 PRDM8 EMX1 C4orf54

1.30e-0511058446635a130453c2fa304f0e09561b2a267c9ceb31
ToppCellEntopeduncular-Neuronal-Excitatory-eN1(Slc17a7)|Entopeduncular / BrainAtlas - Mouse McCarroll V32

KRT2 PRDM8 EMX1 C4orf54

1.30e-051105843639fb5fc02eca509cb220295bc3e6064c23baab
ToppCellrenal_medulla_nuclei-Renal_AKI_(acute_kidney_injury)-Epithelial-Distal_tubule_epithelial_cell-kidney_distal_convoluted_tubule_epithelial_cell|Renal_AKI_(acute_kidney_injury) / Celltypes from Cells and Nuclei per compartment and clinical group

CNNM2 NALF1 DACH1 EMX1

3.53e-051425845b6b0c611c83b23ef7289854a515b78f6cf84500
ToppCellPosterior_cortex-Neuronal-Excitatory-eN1(Slc17a7)-eN1_1|Posterior_cortex / BrainAtlas - Mouse McCarroll V32

CDH22 BHLHE22 EMX1 SYNGAP1

3.63e-051435845fb5a4ea93e5cce55d427e3b4a50a979504fad3c
ToppCellPosterior_cortex-Neuronal-Excitatory-eN1(Slc17a7)-eN1_1-Bcl6|Posterior_cortex / BrainAtlas - Mouse McCarroll V32

KRT2 CDH22 FEZF2 HCN1

3.73e-0514458408005be9e3367f78ef27e125d9cce5ca53f4bd2d
ToppCellPND01-03-samps-Endothelial-Postnatal_endothelial-endothelial_cells_C|PND01-03-samps / Age Group, Lineage, Cell class and subclass

SOX11 DACH1 HNRNPA0 CKAP4

5.10e-051565846c8f442ed94ae31e6832b68137e98ae78091ac6c
ToppCellfrontal_cortex-Neuronal-glutamatergic_neuron-L5_IT-L5_IT_ALM_Lypd1_Gpr88|frontal_cortex / Per Region, Lineage, Cell class, Cell type, Cell subtype

PRDM8 FEZF2 BHLHE22 EMX1

5.23e-051575845aee90ad7aaa65fdabc23597451da5e48db8f4e6
ToppCellprimary_visual_cortex-Neuronal-glutamatergic_neuron-L5_IT-L5_IT_VISp_Hsd11b1_Endou|primary_visual_cortex / Per Region, Lineage, Cell class, Cell type, Cell subtype

PRDM8 FEZF2 BHLHE22 EMX1

5.36e-05158584c8af8964a140acb2987e3b4906d72c546108d229
ToppCellTCGA-Brain-Primary_Tumor-Low_Grade_Glioma-Oligodendroglioma|TCGA-Brain / Sample_Type by Project: Shred V9

NALF1 RETREG2 PLCL2 RIC3

5.77e-051615845f6b2d7f80a8ee16651e304481d2da3fae313824
ToppCell10x5'-lymph-node_spleen-Hematopoietic_progenitors-Progenitor|lymph-node_spleen / Manually curated celltypes from each tissue

MMRN1 SOX4 DACH1 ZNF503

6.34e-051655847b992843bd8ef92a7a76b1d681fa84efde6f5bdd
ToppCell3'_v3-GI_small-bowel-Lymphocytic_Invariant-Inducer-like-ILC3|GI_small-bowel / Manually curated celltypes from each tissue

MMRN1 SOX4 TWIST1 ZNF503

6.49e-05166584773673a5d0430640439845b264740bfbbdad0cb2
ToppCell3'_v3-GI_small-bowel-Lymphocytic_Invariant-Inducer-like|GI_small-bowel / Manually curated celltypes from each tissue

MMRN1 SOX4 TWIST1 ZNF503

6.64e-051675843ae46c6363da76c8e1f5579e6027bf88ed637a44
ToppCellPericytes-Donor_02|World / lung cells shred on cell class, cell subclass, sample id

SOX11 POU3F3 FOXF2 TWIST1

7.28e-05171584bbc8d9fc83d37c9250345b1e76776610799de9ae
ToppCellrenal_medulla_nuclei-Hypertensive_with+without-CKD-Epithelial-Renal_corpuscle_epithelial_cell|Hypertensive_with+without-CKD / Celltypes from Cells and Nuclei per compartment and clinical group

FOXD2 SOX11 LRFN2 DACH1

7.45e-051725846c17a1e586a72d1bd80c20c06370429c61dc9f85
ToppCellnormal-na-Hematopoietic-Progen-male|normal / PBMC cell types (v2) per disease, treatment status, and sex

SOX4 KRT2 BOD1 COL17A1

7.62e-05173584e666364eb110c1c976e5b09a632dd1454513f131
ToppCellCOPD-Lymphoid-ILC_A|Lymphoid / Disease state, Lineage and Cell class

MMRN1 SOX4 PLCL2 DACH1

7.62e-051735844a0043b29f8ede5a74bdb38cbf2c70e12b25e130
ToppCell5'-Adult-Distal_Rectal-Hematopoietic|Adult / Celltypes from developing, pediatric, Crohn's, & adult GI tract

LORICRIN HS3ST6 NBEA CCDC85A

7.62e-05173584b335ca2a247156eba821943b2b9fc9922230b409
ToppCellrenal_medulla_nuclei-Hypertensive_with+without-CKD-Epithelial-Distal_tubule_epithelial_cell-kidney_distal_convoluted_tubule_epithelial_cell-Distal_Convoluted_Tubule_Cell_Type_1|Hypertensive_with+without-CKD / Celltypes from Cells and Nuclei per compartment and clinical group

KRT3 CNNM2 DACH1 EMX1

7.62e-051735844bc6d93716f093b460c8b047199db8cab5fea720
ToppCellAdult-Epithelial-lung_neuroendocrine_cell_(PNEC)|Adult / Lineage, Cell type, age group and donor

LRFN2 NALF1 HCN1 DACH1

7.96e-051755844db1a3c284488b3f6de7568363f176d74e2a4587
ToppCellAdult-Epithelial-lung_neuroendocrine_cell_(PNEC)-D231|Adult / Lineage, Cell type, age group and donor

LRFN2 NALF1 HCN1 DACH1

7.96e-051755848d9f44a2633b71fb4d2b4a7d9530f954e07c4a18
ToppCellFetal_brain-organoid_Tanaka_cellReport-GW26-Neuronal-Interneuron|GW26 / Sample Type, Dataset, Time_group, and Cell type.

SOX4 SOX11 CUX1

8.01e-0564583fefabdf8d72a8f3caf78eb79d759edb475bdb2ad
ToppCellkidney_cells-Renal_AKI_(acute_kidney_injury)-Epithelial-Distal_tubule_epithelial_cell-kidney_distal_convoluted_tubule_epithelial_cell-Distal_Convoluted_Tubule_Cell_Type_2|Renal_AKI_(acute_kidney_injury) / Celltypes from Cells and Nuclei per compartment and clinical group

CNNM2 NALF1 EMX1 ZNF503

8.32e-05177584c9e8149639551a4c8daa90fcb2b895fdcff2e2ba
ToppCellfacs-Lung-18m-Mesenchymal-fibroblast-adventitial_fibroblast-adventitial_fibroblast_l49|18m / method, tissue, age, lineage, sublineage, cell ontologies, cell type and subtype

FNDC3B BHLHE22 FOXF2 FOXD1

8.51e-05178584cb9a446c145b1435cfe12a1d4568aed0924a6a20
ToppCellfacs-Heart-RA-18m|Heart / Tongue_Heart_Limb_Muscle_Aorta_Diaphragm - method, tissue, subtissue, age, lineage, cell ontology and free annotation

JUNB HNRNPA0 FOXA1 RAD23B

8.51e-05178584b505e2550860e777535ee95f29c936242fd607f1
ToppCellPosterior_cortex-Endothelial-ENDOTHELIAL_TIP|Posterior_cortex / BrainAtlas - Mouse McCarroll V32

FOXD2 HS3ST6 FOXD1 TWIST1

8.51e-05178584cda7695411655bd6d0ba69e5041ca7530a9dad3a
ToppCellPrimary_Motor_Cortex_(M1)-Neuronal-Glutamatergic_Excit-Glut_C-D_(RORB)-Glut_D_(IT_RORB_THEMIS_LINC00507)_2|Primary_Motor_Cortex_(M1) / Sample groups (6 Anatomical region groups), with 5 level hierarchy of cell types

PRDM8 BHLHE22 CCDC85A TWIST1

8.69e-051795848766a5a066091879f521acfc612abf563ff78808
ToppCell3'-Child09-12-SmallIntestine-Epithelial-neuro-epithelial-EC_cells_(TAC1+)|Child09-12 / Celltypes from developing, pediatric, Crohn's, & adult GI tract

HCN1 NBEA FOXA1 FOXD1

8.69e-051795848ce5000088b727783a0619baa16a2cd036d21f54
ToppCellrenal_cortex_nuclei-Renal_AKI_(acute_kidney_injury)-Epithelial-Distal_tubule_epithelial_cell-kidney_distal_convoluted_tubule_epithelial_cell-Distal_Convoluted_Tubule_Cell_Type_2|Renal_AKI_(acute_kidney_injury) / Celltypes from Cells and Nuclei per compartment and clinical group

CNNM2 NALF1 DACH1 EMX1

8.69e-05179584666072c0e8448dbaec1683d18368ec2502453f90
ToppCellfacs-Brain_Non-Myeloid-Cerebellum_-18m-Neuronal-Granular_Neuron_CB_Gabra6|Brain_Non-Myeloid / Brain_Non-Myeloid_Brain_Myeloid - method, tissue, subtissue, age, lineage, cell ontology and free annotation

PRDM8 NALF1 HCN1 BHLHE22

8.88e-05180584d76349ecef7c5878bf215e946f032264161eb61b
ToppCell3'-GW_trimst-2-LargeIntestine-Epithelial-neuro-epithelial-EC_cells_(TAC1+)|GW_trimst-2 / Celltypes from developing, pediatric, Crohn's, & adult GI tract

FOXD2 HCN1 FOXA1 FOXD1

8.88e-05180584d553aba594f5304f1c09ff9c6d49b64cd7ee7850
ToppCellprimary_auditory_cortex_(A1C)-Neuronal-Glutamatergic_Excit-Glut_C-D_(RORB)-Glut_C_(IT_L4_RORB)|primary_auditory_cortex_(A1C) / Sample groups (6 Anatomical region groups), with 5 level hierarchy of cell types

PRDM8 CDH22 BHLHE22 CUX1

8.88e-051805845391d23817f5cc88a0871ddb98968897c839f464
ToppCellfacs-Brain_Non-Myeloid-Cerebellum_-18m-Neuronal-neuron|Brain_Non-Myeloid / Brain_Non-Myeloid_Brain_Myeloid - method, tissue, subtissue, age, lineage, cell ontology and free annotation

PRDM8 NALF1 HCN1 BHLHE22

8.88e-051805843d54cc767e25d91ed2203d8a03e5bf5e15f21699
ToppCellfrontal_cortex-Neuronal-glutamatergic_neuron|frontal_cortex / Per Region, Lineage, Cell class, Cell type, Cell subtype

PRDM8 FEZF2 BHLHE22 EMX1

9.07e-0518158458f76bb9ea1518c2b629a0256a3f6595a9278152
ToppCellwk_08-11-Mesenchymal-Fibroblast-Mesenchymal_2|wk_08-11 / Celltypes from embryonic and fetal-stage human lung

PRDM8 FOXF2 FOXD1 TWIST1

9.07e-051815849b2d207dc9fc2228a1555ed360286bb7c2d988ff
ToppCellrenal_medulla_nuclei-Hypertensive_with+without-CKD-Epithelial-Distal_tubule_epithelial_cell-kidney_distal_convoluted_tubule_epithelial_cell|Hypertensive_with+without-CKD / Celltypes from Cells and Nuclei per compartment and clinical group

KRT3 CNNM2 DACH1 EMX1

9.07e-05181584e0abf2707d9e0aa942c657eef7d2cbcd02f060dd
ToppCellSmart-start-Cell-Wel_seq-Neoplastic-Stem-like-NPC-like-NPC-like_neural-G|Smart-start-Cell-Wel_seq / Platform, Oncotype, Lineage, Cell_class, celltype (level4), mutation group

SOX4 SOX11 NALF1 BHLHE22

9.27e-05182584fa23d5bed1147a423c42bd30029a06963410b16e
ToppCellPCW_05-06-Epithelial-Epithelial_neuroendo-epi_neuroendocrine2[NE2]_(12)|PCW_05-06 / Celltypes from embryonic and fetal-stage human lung

HS3ST6 EMX1 FOXA1 RIC3

9.27e-05182584dc29e8735c3562ce32322351d28f7d9709208ebf
ToppCellFetal_29-31_weeks-Endothelial-endothelial_cell_of_vein-D150|Fetal_29-31_weeks / Lineage, Cell type, age group and donor

MMRN1 NALF1 DACH1 CCDC85A

9.47e-05183584c1297d8eddfc7132e84ceef14f01b6281f9d0f6a
ToppCellPrimary_Visual_cortex_(V1C)-Neuronal-Glutamatergic_Excit-Glut_C-D_(RORB)-Glut_C_(IT_L4_RORB)-Exc_L4_RORB_CACNG5|Primary_Visual_cortex_(V1C) / Sample groups (6 Anatomical region groups), with 5 level hierarchy of cell types

FNDC3B BHLHE22 CCDC85A CUX1

9.67e-05184584658f2e522055e88c92bc482a845c40f8f5f1a8e3
ToppCellfacs-Brain_Non-Myeloid-Cerebellum_-18m-Neuronal|Brain_Non-Myeloid / Brain_Non-Myeloid_Brain_Myeloid - method, tissue, subtissue, age, lineage, cell ontology and free annotation

PRDM8 NALF1 HCN1 BHLHE22

9.67e-051845847d9bcdaff8cbea4c50ab7db0f8e01f6bbd0ef593
ToppCelldroplet-Kidney-KIDNEY-1m-Epithelial-Pecam____kidney_capillary_endothelial_cell|Kidney / Skin_Bladder_Kidney_Mammary_Gland - method, tissue, subtissue, age, lineage, cell ontology and free annotation

FOXD2 HS3ST6 FOXD1 TWIST1

9.67e-051845841c857126c0ea0671f0d60b048efca288d348d653
ToppCellEndothelial-A-Donor_04|World / lung cells shred on cell class, cell subclass, sample id

MMRN1 NALF1 DACH1 DNAJB4

9.87e-05185584ae49c61f6ecf128fe2a958b8c75c83688da75f59
ToppCellControl-Lymphoid-ILC_A|Lymphoid / Disease state, Lineage and Cell class

MMRN1 SOX4 PLCL2 DACH1

9.87e-05185584520795866d44def5be3910ce8e728045c716a24d
ToppCellrenal_medulla_nuclei-Adult_normal_reference-Epithelial-Collecting_tubule_epithelial_cell-kidney_collecting_duct_principal_cell-Outer_Medullary_Collecting_Duct_Principal_Cell|Adult_normal_reference / Celltypes from Cells and Nuclei per compartment and clinical group

NALF1 PLCL2 EMX1 C4orf54

9.87e-05185584d602a9b35e86e6f2a14a58e40fc4fb97f5fa3b08
ToppCellrenal_cortex_nuclei-Renal_AKI_(acute_kidney_injury)-Epithelial-Collecting_tubule_epithelial_cell-kidney_connecting_tubule_epithelial_cell-Degenerative_Connecting_Tubule_Cell|Renal_AKI_(acute_kidney_injury) / Celltypes from Cells and Nuclei per compartment and clinical group

SOX4 NALF1 DACH1 EMX1

1.01e-04186584b3358e0fa6d845c81e94d56c8575f016621d28ff
ToppCell3'-GW_trimst-1-LargeIntestine-Neuronal-neuron_precursor-Neuroblast|GW_trimst-1 / Celltypes from developing, pediatric, Crohn's, & adult GI tract

SOX11 FOXD3 POU3F3 NBEA

1.03e-04187584dfc2b95d70daf533bc0cc4ce78af9f65dd75a25b
ToppCellChildren_(3_yrs)-Endothelial-endothelial_cell_of_vein|Children_(3_yrs) / Lineage, Cell type, age group and donor

MMRN1 NALF1 DACH1 CCDC85A

1.03e-04187584e35716f8b482be3bf5ab79f087a9caf67a9d197a
ToppCellSmart-start-Cell-Wel_seq-Neoplastic-Stem-like-NPC-like-NPC-like_neural|Smart-start-Cell-Wel_seq / Platform, Oncotype, Lineage, Cell_class, celltype (level4), mutation group

SOX4 SOX11 NALF1 BHLHE22

1.03e-0418758485645de9069bd9a8a02d53b0d3d73bf9c2b57189
ToppCellrenal_cortex_nuclei-Hypertensive_with+without-CKD-Epithelial-Distal_tubule_epithelial_cell-kidney_distal_convoluted_tubule_epithelial_cell-Distal_Convoluted_Tubule_Cell_Type_1|Hypertensive_with+without-CKD / Celltypes from Cells and Nuclei per compartment and clinical group

CNNM2 NALF1 DACH1 EMX1

1.05e-04188584bc089cd73d283ed7d2ecbb3936673b4edc89f666
ToppCellCOVID-19-kidney-DCT|kidney / Disease (COVID-19 only), tissue and cell type

CNNM2 NALF1 DACH1 EMX1

1.05e-04188584df1fd0819d301679f3c9ea404e942e39095912eb
ToppCellrenal_cortex_nuclei-Hypertensive_with+without-CKD-Epithelial-Distal_tubule_epithelial_cell-kidney_distal_convoluted_tubule_epithelial_cell|Hypertensive_with+without-CKD / Celltypes from Cells and Nuclei per compartment and clinical group

CNNM2 NALF1 DACH1 EMX1

1.05e-04188584eec3d353e51358db4c7621265ee0fdd4298e5b0e
ToppCelldroplet-Kidney-KIDNEY-30m-Epithelial-kidney_distal_convoluted_tubule_epithelial_cell|Kidney / Skin_Bladder_Kidney_Mammary_Gland - method, tissue, subtissue, age, lineage, cell ontology and free annotation

CNNM2 DACH1 POU3F3 EMX1

1.05e-04188584d2d2b6c49448da24f457cedcd213f68841834a99
ToppCellkidney_cells-Hypertensive_with+without-CKD-Epithelial-Collecting_tubule_epithelial_cell-kidney_collecting_duct_intercalated_cell-Transitional_Principal-Intercalated_Cell|Hypertensive_with+without-CKD / Celltypes from Cells and Nuclei per compartment and clinical group

SOX4 JUNB EMX1 ZNF503

1.05e-0418858436459e5b91cbd7336a502d96b0dc37ca560ae4d6
ToppCelldroplet-Kidney-KIDNEY-30m-Epithelial-Epcam_____kidney_distal_convoluted_tubule_epithelial_cell|Kidney / Skin_Bladder_Kidney_Mammary_Gland - method, tissue, subtissue, age, lineage, cell ontology and free annotation

CNNM2 DACH1 POU3F3 EMX1

1.05e-04188584ab6fa1beff91584d9303c2a33735de89aae8d5cd
ToppCelldroplet-Kidney-KIDNEY-30m-Epithelial-Epcam____podocyte|Kidney / Skin_Bladder_Kidney_Mammary_Gland - method, tissue, subtissue, age, lineage, cell ontology and free annotation

SOX4 SOX11 FOXA1 FOXD1

1.07e-04189584319e42f6e2322208de78bc666fb2c074707eb4da
ToppCellwk_15-18-Mesenchymal-Myofibro_&_SMC-Myofibro_1|wk_15-18 / Celltypes from embryonic and fetal-stage human lung

SOX11 BOD1 FOXF2 ZNF503

1.09e-04190584d24af6af3271e34afab744352afd28be8a7cc5c3
ToppCellPCW_07-8.5-Epithelial-Epithelial_neuroendo-epi_neuroendocrine1[NE1]_(11)|PCW_07-8.5 / Celltypes from embryonic and fetal-stage human lung

MMRN1 CDH22 FOXA1 RIC3

1.09e-04190584b1095b2a7467c152d16e4f19a9515aeb61fc9e3d
ToppCell10x_3'_v2v3-Neoplastic-Stem-like-NPC-like-NPC-like_neural-D|10x_3'_v2v3 / Platform, Oncotype, Lineage, Cell_class, celltype (level4), mutation group

SOX4 SOX11 BHLHE22 HNRNPA0

1.09e-04190584b4dfc41f5a630140cab8b1b86de85de0f5b25e4a
ToppCellBrain_organoid-organoid_Kanton_Nature-Organoid-2M-Neuronal-ventral_progenitors_and_neurons_2|Organoid-2M / Sample Type, Dataset, Time_group, and Cell type.

SOX4 SOX11 JUNB ZNF503

1.12e-04191584509d17d8ee0d028757ce0f2c9b97e5875f06f0ab
ToppCellBrain_organoid-organoid_Paulsen_bioRxiv-3_mon-IPC_like|3_mon / Sample Type, Dataset, Time_group, and Cell type.

SOX4 SOX11 DACH1 EMX1

1.12e-0419158448cffb55c71bb8b34e926fc461fcd345ce43ea00
ToppCell3'-GW_trimst-1-LargeIntestine-Neuronal-neuron_precursor|GW_trimst-1 / Celltypes from developing, pediatric, Crohn's, & adult GI tract

SOX11 FOXD3 POU3F3 NBEA

1.12e-04191584a53616c84178eb6c29b48662358765b082df3f97
ToppCellBrain_organoid-organoid_Paulsen_bioRxiv-3_mon-IPC_like-IPCs|3_mon / Sample Type, Dataset, Time_group, and Cell type.

SOX4 SOX11 DACH1 EMX1

1.12e-04191584e4c1c533771b582e21683dbec6f93a558d865e00
ToppCellNeuron-Postmitotic-Excitatory_Neuron_-Deep_Layer-27|World / Primary Cells by Cluster

JUNB FEZF2 EMX1 ZNF503

1.14e-04192584cf989f26c0ebdc0cd12e1e41958f063e4fa3e468
ToppCellPrimary_Visual_cortex_(V1C)-Neuronal-Glutamatergic_Excit-Glut_C-D_(RORB)-Glut_C_(IT_L4_RORB)-Exc_L4_RORB_BHLHE22|Primary_Visual_cortex_(V1C) / Sample groups (6 Anatomical region groups), with 5 level hierarchy of cell types

PRDM8 BHLHE22 CCDC85A CUX1

1.14e-0419258425460ca9ebd3d49f666394cf99ab77a5e8f77250
ToppCellkidney_cells-Hypertensive_with+without-CKD-Epithelial-Distal_tubule_epithelial_cell-kidney_distal_convoluted_tubule_epithelial_cell-Degenerative_Distal_Convoluted_Tubule_Cell|Hypertensive_with+without-CKD / Celltypes from Cells and Nuclei per compartment and clinical group

CNNM2 DACH1 EMX1 ZNF503

1.14e-0419258446ea8f4f292db70420b378c6fa3e55e99413679c
ToppCellE15.5-Endothelial-proliferative_endothelial_cell-proliferative_endothelial_cell|E15.5 / developmental_time, Lineage, Cell group, Cell type, Cell type_cellcyc-phase

MMRN1 PRDM8 DACH1 CCDC85A

1.16e-041935849f4ffce4e1440b009b0b5947ebf52b12a644704d
ToppCellControl-CD8+_T_naive|Control / Disease condition and Cell class

SOX4 NBEA RIC3 SYNGAP1

1.16e-04193584627d345baf1940218c61907305705298e473dbab
ToppCellfacs-Tongue-nan-18m-Epithelial-nan|Tongue / Tongue_Heart_Limb_Muscle_Aorta_Diaphragm - method, tissue, subtissue, age, lineage, cell ontology and free annotation

HNRNPA0 HS3ST6 RING1 RAD23B

1.16e-0419358445361266b5c6e9b229ef80ef692f01b48e5b38ed
ToppCellE15.5-Endothelial-proliferative_endothelial_cell|E15.5 / developmental_time, Lineage, Cell group, Cell type, Cell type_cellcyc-phase

MMRN1 PRDM8 DACH1 CCDC85A

1.16e-04193584ed6fc4f731624be702563d7d2f0bf366bec1e042
ToppCellBrain_organoid-organoid_Paulsen_bioRxiv-3.5_mon-IPC_like-IPCs|3.5_mon / Sample Type, Dataset, Time_group, and Cell type.

SOX4 SOX11 EMX1 CUX1

1.16e-041935842088f1d210c73f74685492c63065c62ac3f553e9
Diseaselung non-small cell carcinoma (is_marker_for)

SOX4 JUNB IRS4 FOXA1 CUX1

1.75e-05169565DOID:3908 (is_marker_for)
DiseaseGlobal developmental delay

SOX4 POU3F3 NBEA SUZ12

1.21e-04133564C0557874
Diseaseattention deficit hyperactivity disorder, substance abuse, antisocial behaviour measurement

CDH22 CNNM2 LRFN2 HCN1 PLCL2 DACH1 NBEA CUX1

1.28e-04801568EFO_0003888, EFO_0007052, MONDO_0002491
DiseaseCoffin-Siris syndrome

SOX4 SOX11

2.72e-0413562C0265338
Diseaselarge artery stroke, coronary artery disease

CNNM2 TWIST1

1.03e-0325562EFO_0001645, EFO_0005524
Diseaseresponse to perphenazine

HCN1 C4orf54

1.12e-0326562GO_0097334
Diseasesmoking status measurement

SP8 CNNM2 HCN1 PLCL2 DACH1 HS3ST6 DNAJB4 SYNGAP1

1.48e-031160568EFO_0006527
DiseaseIntellectual Disability

SOX4 POU3F3 NBEA SUZ12 SYNGAP1

1.58e-03447565C3714756
Diseaseangina pectoris

PRDM8 CNNM2 TWIST1

1.75e-03125563EFO_0003913

Protein segments in the cluster

PeptideGeneStartEntry
MSTGGGGAGSLGAGG

COL17A1

1311

Q9UMD9
GGGSMGGGGSGFISG

MLLT6

201

P55198
KGGHRGGGGGGGKSS

CKAP4

66

Q07065
TGGGKEKGSGGSGGG

CUX1

846

P39880
GSAGSGGGGGGGVGV

BHLHE22

86

Q8NFJ8
GGEGKGGSDGGGSHR

CD99

101

P14209
GGGGGGISAGGGVAS

DACH1

116

Q9UI36
GGGGGSGGIAEAGSG

RAD23B

341

P54727
SGSGAGGGGRGGKAS

RBM15B

86

Q8NDT2
GGGAGGGGSAGSGAK

FOXD1

106

Q16676
GTGGIGGVGGTGGVG

MMRN1

161

Q13201
SGGGKHSSGGGSRGG

KRT2

591

P35908
MGGGLGGGFSAGGGS

KRT3

546

P12035
GGISLGGSGGATKGG

KRT79

486

Q5XKE5
GKGSNHRGGGGGGAG

GSX1

206

Q9H4S2
SYGGGMGGGVGDGGL

KRT24

121

Q2M2I5
CVKTSGGGGGGGGSG

LORICRIN

16

P23490
GGGSSVGGSGSGKGV

LORICRIN

281

P23490
FAKAKGSGGGAGGGG

RIC3

76

Q7Z5B4
GGGGSGSGGSGAKGG

FOXA1

276

P55317
GLKGGAGGTDGQGGT

DNAJB4

71

Q9UDY4
SVCFKVDGGGGGGGG

HCN1

56

O60741
MAESGGSSGGAGGGG

KLHL26

1

Q53HC5
GGSGGGGSGSGPGIK

FNDC3B

231

Q53EP0
SKSHGSGGGGGGGGG

DHX57

31

Q6P158
GGGGGGGGGNRKASS

DHX57

41

Q6P158
MADGGGGGGTGAVGG

BOD1

1

Q96IK1
GGGGTGAVGGGGTSQ

BOD1

6

Q96IK1
DHKHGGGSGGSGGSG

CCDC85A

371

Q96PX6
ELKGGDGGGSAGGGA

CDH22

696

Q9UJ99
KDGGTGGGTGGGGAG

EMX1

51

Q04741
EGEKISGGGGGGKGG

C4orf54

321

D6RIA3
GGKGGGGGGAGDGTE

C4orf54

331

D6RIA3
GGGGGGAGGGAQSLV

POU3F3

241

P20264
GGGGTGGVGGGAGSE

RING1

216

Q06587
VGAGVAGGTGGSGGG

FOXD3

396

Q9UJU5
KSSLRAGGGGGGGGG

FEZF2

96

Q8TBJ5
MAGSGGLGGGAGGGQ

HS3ST6

1

Q96QI5
GSGGGKNSGGGKGSG

IRS4

581

O14654
AGGGGAGAGSGGAKK

FOXF2

76

Q12947
LKTDAGGGAGGGGAG

FOXD2

391

O60548
GGGSAGGGAGGAKTS

SOX11

146

P35716
DKVGGSGGGGHGGGG

SOX4

156

Q06945
GSGGGGTGGSGMGEL

NBEA

31

Q8NFP9
GVGTKDHGGGGGGGK

PRDM8

196

Q9NQV8
GALKAGVGEGGGGGG

PLCL2

26

Q9UPR0
MASGGGGGNTGAGGG

RETREG2

1

Q8NC44
KTHSGGGGGGGSAGS

SP8

436

Q8IXZ3
GGGGGGSAGSGSGGK

SP8

441

Q8IXZ3
GAGGSGSTGGAVGGK

CNNM2

201

Q9H8M5
GSTGGAVGGKGGSGV

CNNM2

206

Q9H8M5
TLTEEGGGGGGGGGS

ZNF384

171

Q8TF68
GGGGAVMGAGGSGTA

ZBTB7B

66

O15156
KEGSIGGSGGSGGGG

SYNGAP1

1111

Q96PV0
GPMKSGGGGGGGGSS

HNRNPA0

266

Q13151
ASGGKSGGGSCGGGG

SUZ12

36

Q15022
GGAGGGGEGSTDGGM

PPP1R3F

506

Q6ZSY5
MASGAGGVGGGGGGK

NUP153

1

P49790
RSSKHSGGGGGGGGG

ZNF503

11

Q96F45
GGGGGGGGGVSSEKS

ZNF503

196

Q96F45
GGGGKGTGGASAEGG

ZNF503

261

Q96F45
GGTGGRDTAGLGGKG

VWA8

1571

A3KMH1
KKSAGCGGGGGAGGG

TWIST1

76

Q15672
GSGGGAGGAGGGVTE

JUNB

116

P17275
GSSKTSRGGGGSGGG

LRFN2

401

Q9ULH4
GDGGGGGGKGNRGKD

NALF1

136

B1AL88