Cluster composition

Functions

CategoryNameIntersectionWithQueryPValueGenesInTermGenesInQueryGenesInTermInQueryID
GeneOntologyMolecularFunctionrRNA binding

MTERF4 NPM1 NCL

7.53e-0579213GO:0019843
GeneOntologyMolecularFunctionchromatin binding

CENPB ATAD2 NPM1 UBTF URI1

8.50e-04739215GO:0003682
GeneOntologyMolecularFunctioncore promoter sequence-specific DNA binding

NPM1 UBTF

1.51e-0355212GO:0001046
GeneOntologyMolecularFunctiongeneral transcription initiation factor activity

UBTF TAF7L

2.30e-0368212GO:0140223
GeneOntologyMolecularFunctionhistone binding

ATAD2 NPM1 NCL

2.58e-03265213GO:0042393
GeneOntologyMolecularFunctionp53 binding

RNF34 NPM1

2.94e-0377212GO:0002039
GeneOntologyBiologicalProcessrRNA transcription

NPM1 UBTF NCL

1.15e-0546203GO:0009303
GeneOntologyBiologicalProcessprotein-DNA complex assembly

ATAD2 NPM1 UBTF TAF7L

8.63e-05249204GO:0065004
GeneOntologyBiologicalProcessrRNA metabolic process

MTERF4 NPM1 UBTF NCL

1.27e-04275204GO:0016072
GeneOntologyBiologicalProcessprotein-DNA complex organization

DCAF1 ATAD2 NPM1 BAZ2B UBTF TAF7L

2.74e-04999206GO:0071824
GeneOntologyBiologicalProcessnucleolar large rRNA transcription by RNA polymerase I

UBTF NCL

2.86e-0426202GO:0042790
MousePhenodelayed parturition

CENPB LDOC1

1.23e-055162MP:0012008
DomainARM-like

DCAF1 ATAD2 ARMC9 TAF7L HOMEZ

1.02e-05270215IPR011989
DomainLisH

DCAF1 ARMC9

4.47e-0428212IPR006594
DomainLISH

DCAF1 ARMC9

4.47e-0428212PS50896
DomainLisH

DCAF1 ARMC9

4.47e-0428212SM00667
DomainBROMODOMAIN_1

ATAD2 BAZ2B

7.83e-0437212PS00633
DomainBromodomain

ATAD2 BAZ2B

8.26e-0438212PF00439
DomainBROMODOMAIN_2

ATAD2 BAZ2B

9.62e-0441212PS50014
DomainBROMO

ATAD2 BAZ2B

1.01e-0342212SM00297
DomainBromodomain

ATAD2 BAZ2B

1.01e-0342212IPR001487
Domain-

ATAD2 BAZ2B

1.01e-03422121.20.920.10
Domain-

DCAF1 ATAD2 ARMC9

1.88e-032222131.25.10.10
DomainHomeodomain-like

CENPB UBTF HOMEZ

5.84e-03332213IPR009057
DomainARM-type_fold

DCAF1 ARMC9 ZBTB7C

6.19e-03339213IPR016024
DomainZnf_FYVE_PHD

RNF34 BAZ2B

1.17e-02147212IPR011011
DomainRRM_1

NCL RBM28

2.26e-02208212PF00076
DomainRRM

NCL RBM28

2.44e-02217212SM00360
DomainRRM_dom

NCL RBM28

2.65e-02227212IPR000504
DomainRRM

NCL RBM28

2.72e-02230212PS50102
PathwayPID_MYC_ACTIV_PATHWAY

NPM1 UBTF NCL

9.00e-0579163M66
PathwayREACTOME_TRANSCRIPTIONAL_REGULATION_BY_THE_AP_2_TFAP2_FAMILY_OF_TRANSCRIPTION_FACTORS

ATAD2 NPM1

3.86e-0426162MM15502
PathwayREACTOME_TRANSCRIPTIONAL_REGULATION_BY_THE_AP_2_TFAP2_FAMILY_OF_TRANSCRIPTION_FACTORS

ATAD2 NPM1

8.29e-0438162M27757
PathwayPID_AURORA_B_PATHWAY

NPM1 NCL

8.73e-0439162M14
PathwayWP_MRNA_PROCESSING

DCAF1 NPM1 NCL RBM28

1.39e-03451164MM15946
PathwayREACTOME_RRNA_PROCESSING

MTERF4 NCL RBM28

1.48e-03205163M27685
PathwayWP_PATHOGENIC_ESCHERICHIA_COLI_INFECTION

WASL NCL

1.73e-0355162M39613
PathwayKEGG_PATHOGENIC_ESCHERICHIA_COLI_INFECTION

WASL NCL

1.79e-0356162M2333
Pubmed

A comprehensive resource of interacting protein regions for refining human transcription factor networks.

CENPB MTERF4 UBTF NCL URI1 LDOC1

1.76e-0919122620195357
Pubmed

ABH2 couples regulation of ribosomal DNA transcription with DNA alkylation repair.

NPM1 UBTF NCL

2.19e-09522323972994
Pubmed

A Chemical Proteomics Approach to Reveal Direct Protein-Protein Interactions in Living Cells.

CENPB NPM1 UBTF NCL

6.20e-093522429104064
Pubmed

Nucleolar distribution of proteins B23 and nucleolin in mouse preimplantation embryos as visualized by immunoelectron microscopy.

NPM1 NCL

3.82e-0722222100262
Pubmed

DIGE-based proteomic analysis identifies nucleophosmin/B23 and nucleolin C23 as over-expressed proteins in relapsed/refractory acute leukemia.

NPM1 NCL

3.82e-07222221310483
Pubmed

C23 interacts with B23, a putative nucleolar-localization-signal-binding protein.

NPM1 NCL

3.82e-0722228620867
Pubmed

[Features of the Structure and Expression of NPM and NCL Genes in Cutaneous Melanoma].

NPM1 NCL

3.82e-07222231397440
Pubmed

Regulation of nucleolar chromatin by B23/nucleophosmin jointly depends upon its RNA binding activity and transcription factor UBF.

NPM1 UBTF

3.82e-07222220713446
Pubmed

AML-associated mutation of nucleophosmin compromises its interaction with nucleolin.

NPM1 NCL

3.82e-07222230130654
Pubmed

The gene coding for a major tumor rejection antigen of tumor P815 is identical to the normal gene of syngeneic DBA/2 mice.

NPM1 NCL

3.82e-0722221903428
Pubmed

Nucleolin and Nucleophosmin Expression in Gleason 3 and Gleason 4 Prostate Cancer With Seminal Vesicles Invasion (pT3b).

NPM1 NCL

3.82e-07222232234886
Pubmed

In vivo interaction of nucleophosmin/B23 and protein C23 during cell cycle progression in HeLa cells.

NPM1 NCL

3.82e-07222210503877
Pubmed

FGF13A interacts with NPM1 and UBF and inhibits the invasion of bladder cancer cells.

NPM1 UBTF

1.15e-06322237603967
Pubmed

Lrrc34, a novel nucleolar protein, interacts with npm1 and ncl and has an impact on pluripotent stem cells.

NPM1 NCL

1.15e-06322224991885
Pubmed

Nucleolar localization of the ErbB3 receptor as a new target in glioblastoma.

UBTF NCL

1.15e-06322235255831
Pubmed

Nucleolar localization of aprataxin is dependent on interaction with nucleolin and on active ribosomal DNA transcription.

UBTF NCL

1.15e-06322216777843
Pubmed

Identification of Microprotein-Protein Interactions via APEX Tagging.

NPM1 NCL

1.15e-06322228589727
Pubmed

Function of homo- and hetero-oligomers of human nucleoplasmin/nucleophosmin family proteins NPM1, NPM2 and NPM3 during sperm chromatin remodeling.

NPM1 NCL

2.29e-06422222362753
Pubmed

Ribosomal stress induces processing of Mybbp1a and its translocation from the nucleolus to the nucleoplasm.

NPM1 NCL

2.29e-06422218173745
Pubmed

Tumor suppressor ARF degrades B23, a nucleolar protein involved in ribosome biogenesis and cell proliferation.

NPM1 NCL

2.29e-06422214636574
Pubmed

Nuclear DNA helicase II (RNA helicase A) binds to an F-actin containing shell that surrounds the nucleolus.

UBTF NCL

2.29e-06422214729462
Pubmed

Intracellular redistribution of nuclear and nucleolar proteins during differentiation of 32D murine hemopoietic cells.

UBTF NCL

2.29e-06422212878164
Pubmed

Aurora-B regulates RNA methyltransferase NSUN2.

NPM1 NCL

2.29e-06422217215513
Pubmed

C1q protein binds to the apoptotic nucleolus and causes C1 protease degradation of nucleolar proteins.

NPM1 NCL

2.29e-06422226231209
Pubmed

Nucleolar retention of a translational C/EBPalpha isoform stimulates rDNA transcription and cell size.

NPM1 UBTF

2.29e-06422220075868
Pubmed

A B-cell-specific DNA recombination complex.

NPM1 NCL

2.29e-0642229642267
Pubmed

Nucleophosmin is essential for ribosomal protein L5 nuclear export.

NPM1 NCL

3.82e-06522216648475
Pubmed

Nucleolin modulates the subcellular localization of GDNF-inducible zinc finger protein 1 and its roles in transcription and cell proliferation.

NPM1 NCL

3.82e-06522217674968
Pubmed

The basic helix-loop-helix factor, HAND2, functions as a transcriptional activator by binding to E-boxes as a heterodimer.

CENPB NPM1

5.72e-06622211812799
Pubmed

Epigenetic silencing of the p16(INK4a) tumor suppressor is associated with loss of CTCF binding and a chromatin boundary.

NPM1 NCL

5.72e-06622219450526
Pubmed

Myc promotes polyploidy in murine trophoblast cells and suppresses senescence.

NPM1 NCL

8.01e-06722237278344
Pubmed

Dido3-dependent SFPQ recruitment maintains efficiency in mammalian alternative splicing.

NPM1 NCL

8.01e-06722230931476
Pubmed

H4K20me0 recognition by BRCA1-BARD1 directs homologous recombination to sister chromatids.

NPM1 BAZ2B UBTF CASZ1 NCL HOMEZ RBM28

1.01e-05129422730804502
Pubmed

The RNA-binding protein HuR is a novel target of Pirh2 E3 ubiquitin ligase.

DCAF1 NPM1 UBTF NCL

1.04e-0522022434091597
Pubmed

Regulation of ubiquitin ligase dynamics by the nucleolus.

NPM1 UBTF

1.07e-05822216129783
Pubmed

Proteomic analysis of human Nop56p-associated pre-ribosomal ribonucleoprotein complexes. Possible link between Nop56p and the nucleolar protein treacle responsible for Treacher Collins syndrome.

NPM1 NCL RBM28

1.27e-057222312777385
Pubmed

Screen identifies bromodomain protein ZMYND8 in chromatin recognition of transcription-associated DNA damage that promotes homologous recombination.

ATAD2 BAZ2B NCL

1.44e-057522325593309
Pubmed

Identification of proteins associated with ligand-activated estrogen receptor α in human breast cancer cell nuclei by tandem affinity purification and nano LC-MS/MS.

NPM1 UBTF NCL RBM28

1.59e-0524522421182205
Pubmed

Maternal DCAF13 Regulates Chromatin Tightness to Contribute to Embryonic Development.

NPM1 UBTF

2.09e-051122231000741
Pubmed

The Nse5/6-like SIMC1-SLF2 complex localizes SMC5/6 to viral replication centers.

NPM1 BAZ2B UBTF NCL HMGB1P1 RBM28

2.15e-0595422636373674
Pubmed

Nucleophosmin deposition during mRNA 3' end processing influences poly(A) tail length.

NPM1 HIVEP2

2.51e-051222221822216
Pubmed

Genetic inactivation of the transcription factor TIF-IA leads to nucleolar disruption, cell cycle arrest, and p53-mediated apoptosis.

NPM1 UBTF

2.51e-051222215989966
Pubmed

Ebp1 sumoylation, regulated by TLS/FUS E3 ligase, is required for its anti-proliferative activity.

NPM1 NCL

2.51e-051222219946338
Pubmed

MYC multimers shield stalled replication forks from RNA polymerase.

DCAF1 ATAD2 NPM1 UBTF NCL RBM28

2.63e-0598922636424410
Pubmed

A feedforward circuit shaped by ECT2 and USP7 contributes to breast carcinogenesis.

NPM1 NCL

2.97e-051322232929379
Pubmed

Disruption of the lamin A and matrin-3 interaction by myopathic LMNA mutations.

NPM1 UBTF NCL

3.02e-059622325948554
Pubmed

The in vivo Interaction Landscape of Histones H3.1 and H3.3.

ATAD2 BAZ2B UBTF CASZ1 HOMEZ

3.31e-0560822536089195
Pubmed

Human BRE1 is an E3 ubiquitin ligase for Ebp1 tumor suppressor.

NPM1 NCL

3.46e-051422219037095
Pubmed

WWP2 ubiquitylates RNA polymerase II for DNA-PK-dependent transcription arrest and repair at DNA breaks.

NPM1 UBTF NCL URI1 RBM28

3.49e-0561522531048545
Pubmed

Functional proteomic analysis of human nucleolus.

NPM1 NCL RBM28

4.06e-0510622312429849
Pubmed

Tandem immunoprecipitation approach to identify HIV-1 Gag associated host factors.

NPM1 NCL

4.56e-051622224690621
Pubmed

Functional proteomics establishes the interaction of SIRT7 with chromatin remodeling complexes and expands its role in regulation of RNA polymerase I transcription.

ATAD2 NPM1 UBTF NCL RBM28

4.64e-0565322522586326
Pubmed

Nuclear organization of nucleotide excision repair is mediated by RING1B dependent H2A-ubiquitylation.

NPM1 NCL RBM28

4.79e-0511222328416769
Pubmed

ZBTB2 protein is a new partner of the Nucleosome Remodeling and Deacetylase (NuRD) complex.

CENPB UBTF HOMEZ RBM28

5.09e-0533022433301849
Pubmed

A genome-wide RNAi screen identifies multiple synthetic lethal interactions with the Ras oncogene.

DCAF1 UBTF NCL URI1

5.15e-0533122419490893
Pubmed

Interactions of the Antiviral Factor Interferon Gamma-Inducible Protein 16 (IFI16) Mediate Immune Signaling and Herpes Simplex Virus-1 Immunosuppression.

CENPB ATAD2 UBTF RBM28

5.21e-0533222425693804
Pubmed

Widespread Expansion of Protein Interaction Capabilities by Alternative Splicing.

NPM1 WASL LDOC1 HOMEZ RBM28

8.50e-0574222526871637
Pubmed

Importance of EGFR/ERCC1 interaction following radiation-induced DNA damage.

NPM1 NCL

8.76e-052222224780295
Pubmed

The E3 ubiquitin ligase HECTD1 contributes to cell proliferation through an effect on mitosis.

CENPB NPM1 UBTF NCL RBM28

9.45e-0575922535915203
Pubmed

LINC01554-Mediated Glucose Metabolism Reprogramming Suppresses Tumorigenicity in Hepatocellular Carcinoma via Downregulating PKM2 Expression and Inhibiting Akt/mTOR Signaling Pathway.

NPM1 NCL HIVEP2

9.69e-0514222330809309
Pubmed

Nucleolar proteome dynamics.

CENPB NPM1 UBTF RBM28

1.28e-0441922415635413
Pubmed

Shwachman-Bodian Diamond syndrome is a multi-functional protein implicated in cellular stress responses.

NPM1 NCL

1.33e-042722219602484
Pubmed

TRIM28-mediated nucleocapsid protein SUMOylation enhances SARS-CoV-2 virulence.

NPM1 UBTF NCL RBM28

1.41e-0443022438172120
Pubmed

Proteomic profiling of VCP substrates links VCP to K6-linked ubiquitylation and c-Myc function.

DCAF1 ATAD2 NPM1 UBTF NCL RBM28

1.50e-04135322629467282
Pubmed

Reciprocal interaction between SIRT6 and APC/C regulates genomic stability.

NPM1 UBTF NCL RBM28

1.54e-0444022434244565
Pubmed

Combinatorial targeting of a chromatin complex comprising Dot1L, menin and the tyrosine kinase BAZ1B reveals a new therapeutic vulnerability of endocrine therapy-resistant breast cancer.

ATAD2 NPM1 UBTF NCL RBM28

1.58e-0484722535850772
Pubmed

Two-Dimensional Fractionation Method for Proteome-Wide Cross-Linking Mass Spectrometry Analysis.

MTERF4 NPM1 NCL HMGB1P1 RBM28

1.58e-0484722535235311
Pubmed

Proteomic analysis of complexes formed by human topoisomerase I.

NPM1 NCL

1.87e-043222215848144
Pubmed

Nucleophosmin serves as a rate-limiting nuclear export chaperone for the Mammalian ribosome.

NPM1 NCL

1.87e-043222218809582
Pubmed

Interaction proteomics of the HMGA chromatin architectural factors.

NPM1 NCL

1.87e-043222218850631
Pubmed

Ligand-dependent differences in estrogen receptor beta-interacting proteins identified in lung adenocarcinoma cells corresponds to estrogenic responses.

NPM1 NCL

1.87e-043222221951318
Pubmed

Protein kinase DYRK2 is a scaffold that facilitates assembly of an E3 ligase.

DCAF1 NPM1

2.24e-043522219287380
Pubmed

The human CENP-A centromeric nucleosome-associated complex.

CENPB NPM1

2.38e-043622216622419
Pubmed

In vitro nuclear interactome of the HIV-1 Tat protein.

NPM1 UBTF NCL

2.47e-0419522319454010
Pubmed

PML interacts with Myc, and Myc target gene expression is altered in PML-null fibroblasts.

NPM1 NCL

2.51e-043722215735755
Pubmed

LRRC31 inhibits DNA repair and sensitizes breast cancer brain metastasis to radiation therapy.

DCAF1 NPM1 NCL

2.74e-0420222333005030
Pubmed

Directed proteomic analysis of the human nucleolus.

NPM1 UBTF RBM28

2.99e-0420822311790298
Pubmed

Characterization of the DOT1L network: implications of diverse roles for DOT1L.

NPM1 NCL

3.09e-044122220431927
Pubmed

Gene co-regulation by Fezf2 selects neurotransmitter identity and connectivity of corticospinal neurons.

BAZ2B HIVEP2

3.24e-044222224997765
Pubmed

Comprehensive Interactome Mapping of the DNA Repair Scaffold SLX4 Using Proximity Labeling and Affinity Purification.

CENPB BAZ2B UBTF

3.61e-0422222337071664
Pubmed

Cancer-associated exportin-6 upregulation inhibits the transcriptionally repressive and anticancer effects of nuclear profilin-1.

NPM1 NCL

3.72e-044522233596420
Pubmed

Interactome and Proteome Dynamics Uncover Immune Modulatory Associations of the Pathogen Sensing Factor cGAS.

CENPB UBTF RBM28

3.91e-0422822330471916
Pubmed

SIRT7-dependent deacetylation of the U3-55k protein controls pre-rRNA processing.

UBTF NCL

4.41e-044922226867678
Pubmed

KAP1 targets actively transcribed genomic loci to exert pleomorphic effects on RNA polymerase II activity.

NPM1 NCL

4.59e-045022232068487
Pubmed

MDM2 mediates nonproteolytic polyubiquitylation of the DEAD-Box RNA helicase DDX24.

NPM1 NCL

4.59e-045022224980433
Pubmed

Ablation of the oncogenic transcription factor ERG by deubiquitinase inhibition in prostate cancer.

NPM1 NCL

4.97e-045222224591637
Pubmed

HDAC6 activity is not required for basal autophagic flux in metastatic prostate cancer cells.

NPM1 NCL

4.97e-045222226643866
Pubmed

FBW7 suppresses ovarian cancer development by targeting the N6-methyladenosine binding protein YTHDF2.

NPM1 UBTF NCL RBM28

5.04e-0460122433658012
Pubmed

Analysis of proteins copurifying with the CD4/lck complex using one-dimensional polyacrylamide gel electrophoresis and mass spectrometry: comparison with affinity-tag based protein detection and evaluation of different solubilization methods.

NPM1 NCL

5.16e-045322215047060
Pubmed

Human Antiviral Protein IFIX Suppresses Viral Gene Expression during Herpes Simplex Virus 1 (HSV-1) Infection and Is Counteracted by Virus-induced Proteasomal Degradation.

DCAF1 CENPB UBTF

5.17e-0425122328077445
Pubmed

CHD3 and CHD4 form distinct NuRD complexes with different yet overlapping functionality.

NPM1 UBTF NCL RBM28

5.17e-0460522428977666
Pubmed

CIN85 interacting proteins in B cells-specific role for SHIP-1.

UBTF WASL

5.36e-045422221725061
Pubmed

Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome.

NPM1 UBTF NCL

5.66e-042592239811942
Pubmed

SNIP1 Recruits TET2 to Regulate c-MYC Target Genes and Cellular DNA Damage Response.

ATAD2 NPM1 RBM28

5.66e-0425922330404004
Pubmed

Methyltransferase-like 21e inhibits 26S proteasome activity to facilitate hypertrophy of type IIb myofibers.

NPM1 NCL ZBTB7C

5.66e-0425922331162944
Pubmed

Circular RNA circPVT1 promotes nasopharyngeal carcinoma metastasis via the β-TrCP/c-Myc/SRSF1 positive feedback loop.

NPM1 UBTF NCL

5.73e-0426022336199071
Pubmed

Molecular Characterization of the Oncogene BTF3 and Its Targets in Colorectal Cancer.

NPM1 UBTF CASZ1 NCL

5.88e-0462622433644029
Pubmed

Regulation of alternative splicing by SRrp86 and its interacting proteins.

NPM1 NCL

5.97e-045722214559993
InteractionPOLR1E interactions

BAZ2B UBTF CASZ1 NCL URI1 RBM28

1.55e-06350226int:POLR1E
InteractionPES1 interactions

CENPB NPM1 UBTF NCL RBM28

7.29e-06258225int:PES1
InteractionPNMA8A interactions

CENPB UBTF NCL RBM28

8.59e-06122224int:PNMA8A
InteractionPOLR1G interactions

NPM1 BAZ2B UBTF NCL URI1 RBM28

1.06e-05489226int:POLR1G
InteractionRPP25 interactions

NPM1 LDOC1 HOMEZ

3.90e-0561223int:RPP25
InteractionNUP43 interactions

DCAF1 ATAD2 NPM1 BAZ2B UBTF RBM28

4.24e-05625226int:NUP43
InteractionCENPA interactions

CENPB ATAD2 NPM1 UBTF CASZ1

4.52e-05377225int:CENPA
InteractionRNF8 interactions

NPM1 WASL NCL HOMEZ RBM28

7.63e-05421225int:RNF8
InteractionRPL22 interactions

CENPB NPM1 UBTF NCL RBM28

9.39e-05440225int:RPL22
InteractionIRF1 interactions

DCAF1 NPM1 NCL

9.80e-0583223int:IRF1
InteractionBIVM interactions

BAZ2B HOMEZ

1.03e-0414222int:BIVM
InteractionSIRT7 interactions

DCAF1 ATAD2 NPM1 UBTF NCL RBM28

1.11e-04744226int:SIRT7
InteractionRPL23AP32 interactions

DCAF1 NPM1 RBM28

1.13e-0487223int:RPL23AP32
InteractionH3-3A interactions

DCAF1 ATAD2 UBTF CASZ1 NCL HOMEZ

1.16e-04749226int:H3-3A
InteractionCTCF interactions

DCAF1 CENPB NPM1 UBTF NCL

1.17e-04461225int:CTCF
InteractionC3orf49 interactions

CENPB UBTF

1.18e-0415222int:C3orf49
InteractionMDK interactions

NPM1 UBTF NCL

1.29e-0491223int:MDK
InteractionZNF816 interactions

DCAF1 CENPB

1.35e-0416222int:ZNF816
InteractionCBX8 interactions

CENPB NPM1 NCL HOMEZ

1.40e-04249224int:CBX8
InteractionTAF1D interactions

CENPB NPM1 UBTF

1.42e-0494223int:TAF1D
InteractionWWP1 interactions

DCAF1 NPM1 WASL URI1

1.65e-04260224int:WWP1
InteractionKNOP1 interactions

CENPB NPM1 UBTF RBM28

1.96e-04272224int:KNOP1
InteractionRPS24 interactions

DCAF1 NPM1 UBTF NCL RBM28

2.22e-04529225int:RPS24
InteractionZNF543 interactions

CENPB UBTF

2.36e-0421222int:ZNF543
InteractionNOP53 interactions

NPM1 UBTF NCL RBM28

2.44e-04288224int:NOP53
InteractionWDR87 interactions

NPM1 NCL

2.59e-0422222int:WDR87
InteractionCCDC140 interactions

NPM1 NCL RBM28

2.71e-04117223int:CCDC140
InteractionTEX15 interactions

NPM1 NCL

2.84e-0423222int:TEX15
InteractionSULF2 interactions

DCAF1 CENPB UBTF

2.85e-04119223int:SULF2
InteractionSP110 interactions

DCAF1 CENPB NPM1

3.06e-04122223int:SP110
InteractionMTF1 interactions

NPM1 NCL RBM28

3.14e-04123223int:MTF1
InteractionSLX4 interactions

CENPB NPM1 BAZ2B UBTF NCL

3.19e-04572225int:SLX4
InteractionHPSE2 interactions

DCAF1 CENPB

3.36e-0425222int:HPSE2
InteractionPARP1 interactions

CENPB ATAD2 NPM1 UBTF CASZ1 NCL RBM28

3.56e-041316227int:PARP1
InteractionRCHY1 interactions

DCAF1 NPM1 UBTF NCL

3.86e-04325224int:RCHY1
InteractionCENPW interactions

CENPB NPM1

3.93e-0427222int:CENPW
InteractionMAP10 interactions

DCAF1 CENPB

4.54e-0429222int:MAP10
InteractionLINC01554 interactions

NPM1 NCL HIVEP2

4.78e-04142223int:LINC01554
InteractionHIVEP2 interactions

NPM1 HIVEP2

4.86e-0430222int:HIVEP2
InteractionZNF223 interactions

DCAF1 CENPB

4.86e-0430222int:ZNF223
InteractionBYSL interactions

NPM1 NCL LDOC1 HOMEZ

4.89e-04346224int:BYSL
InteractionMAGEB2 interactions

NPM1 UBTF NCL RBM28

5.05e-04349224int:MAGEB2
InteractionSNRNP40 interactions

ATAD2 NPM1 BAZ2B UBTF RBM28

5.23e-04637225int:SNRNP40
InteractionDAXX interactions

CENPB UBTF NCL RBM28

5.27e-04353224int:DAXX
InteractionSMC5 interactions

NPM1 BAZ2B UBTF NCL HMGB1P1 RBM28

5.53e-041000226int:SMC5
InteractionSOX2 interactions

DCAF1 NPM1 BAZ2B UBTF NCL HOMEZ RBM28

5.70e-041422227int:SOX2
InteractionEIF6 interactions

NPM1 NCL HMGB1P1 RBM28

5.98e-04365224int:EIF6
InteractionZBTB7B interactions

ATAD2 UBTF NCL ZBTB7C

6.04e-04366224int:ZBTB7B
InteractionHAND2 interactions

CENPB NPM1

6.25e-0434222int:HAND2
InteractionEED interactions

DCAF1 ATAD2 NPM1 BAZ2B CASZ1 NCL RBM28

6.28e-041445227int:EED
InteractionLYAR interactions

NPM1 UBTF NCL RBM28

6.49e-04373224int:LYAR
InteractionZBTB48 interactions

CENPB NPM1 RBM28

6.53e-04158223int:ZBTB48
InteractionWDR43 interactions

NPM1 NCL RBM28

6.65e-04159223int:WDR43
InteractionAATF interactions

NPM1 NCL LDOC1 RBM28

6.68e-04376224int:AATF
InteractionRPL7A interactions

DCAF1 ATAD2 NPM1 NCL RBM28

6.99e-04679225int:RPL7A
InteractionPOLR1B interactions

UBTF NCL URI1

7.02e-04162223int:POLR1B
InteractionRPL37A interactions

NPM1 ASPN NCL RBM28

7.74e-04391224int:RPL37A
InteractionUTP4 interactions

NPM1 UBTF RBM28

8.07e-04170223int:UTP4
InteractionRPL10 interactions

DCAF1 NPM1 UBTF NCL RBM28

8.13e-04702225int:RPL10
InteractionWDR46 interactions

DCAF1 NCL RBM28

8.49e-04173223int:WDR46
InteractionIFI16 interactions

CENPB ATAD2 UBTF NCL RBM28

8.77e-04714225int:IFI16
InteractionSRPK2 interactions

NPM1 UBTF NCL TAF7L RBM28

8.94e-04717225int:SRPK2
InteractionZNF692 interactions

NPM1 RBM28

9.54e-0442222int:ZNF692
InteractionABT1 interactions

DCAF1 CENPB NPM1 RBM28

1.04e-03423224int:ABT1
InteractionNOG interactions

CENPB UBTF

1.09e-0345222int:NOG
InteractionNIFK interactions

NPM1 UBTF NCL RBM28

1.11e-03431224int:NIFK
InteractionUTP23 interactions

UBTF NCL RBM28

1.13e-03191223int:UTP23
InteractionRPL4 interactions

DCAF1 NPM1 CASZ1 NCL RBM28

1.19e-03764225int:RPL4
InteractionFBXO25 interactions

CENPB NPM1 NCL

1.25e-03198223int:FBXO25
InteractionPWP1 interactions

DCAF1 NPM1 NCL

1.25e-03198223int:PWP1
InteractionZNF330 interactions

NPM1 UBTF NCL RBM28

1.26e-03446224int:ZNF330
InteractionRPL18A interactions

DCAF1 NPM1 NCL RBM28

1.27e-03447224int:RPL18A
InteractionH3-4 interactions

DCAF1 ATAD2 NPM1 NCL

1.28e-03448224int:H3-4
InteractionZBTB2 interactions

CENPB UBTF HOMEZ RBM28

1.30e-03450224int:ZBTB2
InteractionLRRC31 interactions

DCAF1 NPM1 NCL

1.38e-03205223int:LRRC31
InteractionMACROH2A1 interactions

DCAF1 CENPB NPM1 NCL

1.39e-03458224int:MACROH2A1
InteractionBRWD1 interactions

NCL HIVEP2

1.40e-0351222int:BRWD1
InteractionH3C15 interactions

CENPB UBTF NCL

1.42e-03207223int:H3C15
InteractionMYBBP1A interactions

NPM1 UBTF NCL RBM28

1.45e-03463224int:MYBBP1A
InteractionFAM90A1 interactions

NPM1 LDOC1 HOMEZ

1.48e-03210223int:FAM90A1
InteractionGRB2 interactions

DCAF1 NPM1 WASL NCL HOMEZ

1.51e-03806225int:GRB2
InteractionOSGIN1 interactions

MTERF4 HOMEZ

1.52e-0353222int:OSGIN1
InteractionDOT1L interactions

ATAD2 NPM1 UBTF NCL RBM28

1.52e-03807225int:DOT1L
InteractionTLE1 interactions

NPM1 UBTF NCL

1.55e-03213223int:TLE1
InteractionC7orf50 interactions

NPM1 NCL RBM28

1.65e-03218223int:C7orf50
InteractionDDX23 interactions

NPM1 UBTF NCL RBM28

1.65e-03480224int:DDX23
InteractionPOLR1A interactions

UBTF URI1 RBM28

1.70e-03220223int:POLR1A
InteractionRPGR interactions

NPM1 HOMEZ

1.75e-0357222int:RPGR
InteractionWWP2 interactions

NPM1 UBTF NCL URI1 RBM28

1.81e-03840225int:WWP2
CytobandEnsembl 112 genes in cytogenetic band chr2q37

MTERF4 NCL ARMC9

1.69e-04226223chr2q37
Cytoband2q37.1

NCL ARMC9

4.76e-04672222q37.1
GeneFamilyRNA binding motif containing

NCL RBM28

1.31e-02213152725
GeneFamilyZinc fingers C2H2-type|ZF class homeoboxes and pseudogenes

CASZ1 HIVEP2 ZBTB7C

1.99e-0271815328
CoexpressionGSE3203_HEALTHY_VS_INFLUENZA_INFECTED_LN_BCELL_UP

CENPB BAZ2B CASZ1 RBM28

2.16e-05200224M6785
CoexpressionAtlasDevelopingLowerUrinaryTract_P1_bladder_B_emap-30374_k-means-cluster#2_top-relative-expression-ranked_1000

BAZ2B ASPN CASZ1 NCL HIVEP2

3.62e-05379225gudmap_developingLowerUrinaryTract_P1_bladder_B_1000_k2
CoexpressionAtlasDevelopingGonad_e18.5_testes_emap-11164_top-relative-expression-ranked_1000

CENPB BAZ2B ASPN UBTF NCL TAF7L

1.37e-04814226gudmap_developingGonad_e18.5_testes_1000
CoexpressionAtlasDevelopingGonad_P2_testes_emap-30171_top-relative-expression-ranked_1000

CENPB BAZ2B ASPN UBTF NCL TAF7L

1.42e-04819226gudmap_developingGonad_P2_testes_1000
ToppCellfacs-Large_Intestine-Distal-18m-Epithelial-epithelial_cell_of_large_intestine|Large_Intestine / Large_Intestine_Pancreas_Liver - method, tissue, subtissue, age, lineage, cell ontology and free annotation

ATAD2 ASPN NCL HIVEP2

1.20e-06173214a5172dee859bf6c2eed46c48bd64dfef0ff9f28f
ToppCellfacs-Large_Intestine-Distal-18m-Epithelial-Lgr5-_amplifying_undifferentiated_cell|Large_Intestine / Large_Intestine_Pancreas_Liver - method, tissue, subtissue, age, lineage, cell ontology and free annotation

ATAD2 ASPN NCL HIVEP2

1.20e-06173214639b5b0b33ce5aa0bc26363c059717012ddc14c0
ToppCellCerebellum-Endothelial-MURAL-M1(Rgs5Acta2)-M1_3-MURAL_Mural.Acta2Rgs5.Rgs5_(Mural.Acta2Rgs5.Rgs5)|Cerebellum / BrainAtlas - Mouse McCarroll V32

HRC ASPN ZBTB7C

3.30e-051342131fa13185a4dfb4563473184c0c4f449011d88631
ToppCellCerebellum-Endothelial-MURAL-M1(Rgs5Acta2)-M1_3-MURAL_Mural.Acta2Rgs5.Rgs5_(Mural.Acta2Rgs5.Rgs5)-|Cerebellum / BrainAtlas - Mouse McCarroll V32

HRC ASPN ZBTB7C

3.30e-051342131ab99a22d0d7657f62f8ea7d96bb24e88de54fd4
ToppCellCerebellum-Endothelial-MURAL-M1(Rgs5Acta2)-M1_3|Cerebellum / BrainAtlas - Mouse McCarroll V32

HRC ASPN ZBTB7C

3.30e-051342138a3acf32cabc37b49d6488d43cdaae7cec79d119
ToppCell(04)_Pre-ciliated-(2)_48hpi|(04)_Pre-ciliated / shred by cell type and Timepoint

CENPB ATAD2 NPM1

5.50e-05159213e1f36b237e314ef6a18224eb8f3b97a612c39506
ToppCell10x5'v1-week_12-13-Hematopoietic-HSC/MPP_and_pro-MEP|week_12-13 / cell types per 3 fetal stages;per 3',per 5'

NPM1 NCL LDOC1

6.03e-0516421347355439e578d1b1a387fb4ee761162028abea4a
ToppCellLPS-antiTNF-Endothelial-Mes-Like-Alv_Cap|LPS-antiTNF / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2

CENPB HIVEP2 ZBTB7C

6.25e-0516621394a00edf66d54bc5f7343daea700ca26cf38fd90
ToppCell10x_3'_v2v3-Non-neoplastic-Lymphoid-CD4/CD8-Reg_T-E|10x_3'_v2v3 / Platform, Oncotype, Lineage, Cell_class, celltype (level4), mutation group

DCAF1 ATAD2 ZBTB7C

6.47e-05168213187b98664843a304406f086ea696adbf32283d07
ToppCellrenal_cortex_nuclei-Renal_AKI_(acute_kidney_injury)-Mesenchymal-Fibroblast-kidney_interstitial_fibroblast-proliferative_fibroblast|Renal_AKI_(acute_kidney_injury) / Celltypes from Cells and Nuclei per compartment and clinical group

ATAD2 HRC ASPN

6.59e-05169213a84490724a206c9bbb145f7ce08613f91d100ac4
ToppCellTCGA-Colorectal-Primary_Tumor-Colorectal_Adenocarcinoma-Rectal_Adenocarcinoma-7|TCGA-Colorectal / Sample_Type by Project: Shred V9

ASPN NCL HIVEP2

7.68e-05178213edc76b8f15056ec1c9a1c61a048b6331a92592d6
ToppCellCerebellum-Endothelial-MURAL-M1(Rgs5Acta2)|Cerebellum / BrainAtlas - Mouse McCarroll V32

HRC ASPN ZBTB7C

8.21e-05182213da61e7cb2537c567968d8bd8baf537ecdff0ab18
ToppCellCerebellum-Endothelial-MURAL|Cerebellum / BrainAtlas - Mouse McCarroll V32

HRC ASPN ZBTB7C

8.21e-05182213b2f03f61aebb5920595fed8b9d6799a09353419b
ToppCellE12.5-Mesenchymal-developing_mesenchymal_cell-mesenchymal_myogenic_precursor_(Axin2+)|E12.5 / developmental_time, Lineage, Cell group, Cell type, Cell type_cellcyc-phase

ATAD2 NPM1 NCL

8.34e-05183213523896bd1a93bdda81a009768baa3a1bdbd108b8
ToppCellPND10-Immune-Immune_Lymphocytic_T/NK-Lymphocytic_B-B-B_prolif|PND10 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif

ATAD2 NPM1 NCL

8.34e-05183213956ff95aef9c5521b6a3ba7ac6df0aad242c1c35
ToppCellCOVID-19_Mild-Neu_4|COVID-19_Mild / 5 Neutrophil clusters in COVID-19 patients

CENPB ATAD2 NCL

8.89e-05187213714851e757c71c559ee6413a3f61d6c117c79ad2
ToppCellLPS_only-Stromal_mesenchymal-Lung_smooth_muscle-Pericyte_3|LPS_only / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2

HRC ARMC9 ZBTB7C

9.18e-05189213975e7aa3b862a8b07c2ab8426a14f5cc54998aca
ToppCellMyeloid-Myeloid-B_(Activated_Macrophage)|Myeloid / shred on cell class and cell subclass (v4)

CENPB NPM1 NCL

9.47e-051912137bf125249af1e8bb138ed4d999fdd74b03ab2447
ToppCellLPS_only-Stromal_mesenchymal-Lung_smooth_muscle|LPS_only / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2

ASPN ARMC9 ZBTB7C

9.47e-0519121308042952431ca1a6fd7dfc13f36eb28643979598
ToppCellCOVID-19_Severe-Lymphoid_T/NK-CD4+_T_activated|COVID-19_Severe / Disease group, lineage and cell class

NPM1 NCL HIVEP2

9.76e-05193213beb862d38b88572836b0a797c8efef7a2492e0b9
ToppCellPBMC-Severe-Lymphocyte-T/NK-CD4+_T-CD4+_T_activated|Severe / Location, Disease Group, Cell group, Cell class and sub_cluster (2021.03.01)

NPM1 NCL HIVEP2

9.76e-05193213f4310faa13fc8ce99a217e2d1c9cc733683797a1
ToppCellPBMC-Severe-Lymphocyte-T/NK-CD4+_T-CD4+_T_activated-|Severe / Location, Disease Group, Cell group, Cell class and sub_cluster (2021.03.09)

NPM1 NCL HIVEP2

9.76e-05193213f8af695457d2a0a911a5ac491742465864ebda37
ToppCellPBMC-Severe-Lymphocyte-T/NK-CD4+_T-CD4+_T_activated-|Severe / Location, Disease Group, Cell group, Cell class and sub_cluster (2021.03.01)

NPM1 NCL HIVEP2

9.76e-051932132901d7a9672a8cf70c9f1c752685b45e4d79ac70
ToppCellPBMC-Severe-Lymphocyte-T/NK-CD4+_T-CD4+_T_activated|Severe / Location, Disease Group, Cell group, Cell class (2021.03.09)

NPM1 NCL HIVEP2

9.76e-05193213089aece40130034a89a5213be778f10b0787eeba
ToppCellsystemic_lupus_erythematosus-flare|systemic_lupus_erythematosus / PBMC cell types (v2) per disease, treatment status, and sex

NPM1 NCL URI1

1.05e-041982134c93ee921d56132d80832d8e94563f32ccf13bbc
ToppCellTracheal-10x3prime_v2-Stromal-Myofibroblastic-Muscle_smooth_pulmonary|10x3prime_v2 / Cell types per location group and 10X technology with lineage, and cell group designations

HRC ASPN LDOC1

1.07e-04199213056a28c36cd58dc695a5ae6f29b62135d6aad819
ToppCellTracheal-10x3prime_v2-Stromal-Myofibroblastic|10x3prime_v2 / Cell types per location group and 10X technology with lineage, and cell group designations

HRC ASPN LDOC1

1.07e-04199213534dcfe8b65ad92bb8d749d1c7036ad4807e09cd
ToppCell3'-Child04-06-SmallIntestine-Hematopoietic-B_cells-Cycling_B_cell|Child04-06 / Celltypes from developing, pediatric, Crohn's, & adult GI tract

ATAD2 NPM1 NCL

1.07e-041992138b7f84a1e385c6a9bd45a5d41f75e30819dbe32d
ToppCell3'-GW_trimst-2-SmallIntestine-Mesenchymal-immature_mesenchymal_cell-Mesoderm_2_(ZEB2+)|GW_trimst-2 / Celltypes from developing, pediatric, Crohn's, & adult GI tract

NPM1 BAZ2B ASPN

1.07e-041992131f5ad0f1971156b28a8d46a380bda906b5fdbedc
ToppCellFetal_brain-organoid_Tanaka_cellReport-GW23|organoid_Tanaka_cellReport / Sample Type, Dataset, Time_group, and Cell type.

HRC BAZ2B NCL

1.08e-04200213e16bde12326f0cfc4d03f9307cba0e21ea2389cb
ToppCellCOVID-19-COVID-19_Severe-Lymphocyte-T/NK-CD4+_T_activated|COVID-19_Severe / Disease, condition lineage and cell class

NPM1 NCL HIVEP2

1.08e-04200213deeed668b129e66156b5f6abe1a07a9bf842a14d
ToppCellHippocampus-Neuronal-Inhibitory-iN2(Gad1Gad2)-Htr1b-Inhibitory_Gad1Gad2_Htr3a.Htr1b_(Interneuron,__(candidate_CGE-derived_11))|Hippocampus / BrainAtlas - Mouse McCarroll V32

LDOC1 TAF7L

4.24e-04652122cf855eed46ba9e1354ac3b5c18d4adcc3e0e7a5
ToppCellHippocampus-Neuronal-Inhibitory-iN2(Gad1Gad2)-Htr1b-Inhibitory_Gad1Gad2_Htr3a.Htr1b_(Interneuron,__(candidate_CGE-derived_11))-|Hippocampus / BrainAtlas - Mouse McCarroll V32

LDOC1 TAF7L

4.24e-0465212f44998b87dc7015b79ca8f8d60f9d7845755b8bb
ToppCellHippocampus-Neuronal-Inhibitory-iN2(Gad1Gad2)-Htr1b|Hippocampus / BrainAtlas - Mouse McCarroll V32

LDOC1 TAF7L

4.24e-04652129a4c853e2723a23b537d2966c6583909d0d0aeb2
ToppCellThalamus-Endothelial-MURAL-M1(Rgs5Acta2)-M1_3-MURAL_Mural.Rgs5Acta2.Car4_(Mural.Rgs5Acta2.Car4)|Thalamus / BrainAtlas - Mouse McCarroll V32

HRC ASPN

6.90e-048321259fce941d45f9763a8584f3fd5b7c0738de9f592
ToppCellThalamus-Endothelial-MURAL-M1(Rgs5Acta2)-M1_3-MURAL_Mural.Rgs5Acta2.Car4_(Mural.Rgs5Acta2.Car4)-|Thalamus / BrainAtlas - Mouse McCarroll V32

HRC ASPN

6.90e-0483212ebabce70dc01fdeda7fccebc2c4a0b686cda580f
ToppCellThalamus-Endothelial-MURAL-M1(Rgs5Acta2)-M1_3|Thalamus / BrainAtlas - Mouse McCarroll V32

HRC ASPN

6.90e-04832124017af9a4804a06d0f2cd0f285ebf1b582b751de
ToppCellHippocampus-Endothelial-MURAL-M1(Rgs5Acta2)-M1_3-MURAL_Mural.Rgs5Acta2.Ccnd1_(Mural.Rgs5Acta2.Ccnd1)-|Hippocampus / BrainAtlas - Mouse McCarroll V32

HRC ASPN

7.75e-04882125fdfc72988dcbb7d2025866b2b00eab8f11f332f
ToppCellHippocampus-Endothelial-MURAL-M1(Rgs5Acta2)-M1_3-MURAL_Mural.Rgs5Acta2.Ccnd1_(Mural.Rgs5Acta2.Ccnd1)|Hippocampus / BrainAtlas - Mouse McCarroll V32

HRC ASPN

7.75e-0488212b9874366925fa1c08a74b14c3c6e127b9dffa23e
ToppCellThalamus-Endothelial-MURAL-M1(Rgs5Acta2)-M1_1-MURAL_Mural.Rgs5Acta2.Cnn1_(Mural.Rgs5Acta2.Cnn1)|Thalamus / BrainAtlas - Mouse McCarroll V32

HRC ASPN

7.93e-04892122c19e2dc979d0f86539a044ae49f126caff50fbb
ToppCellThalamus-Endothelial-MURAL-M1(Rgs5Acta2)-M1_1-MURAL_Mural.Rgs5Acta2.Cnn1_(Mural.Rgs5Acta2.Cnn1)-|Thalamus / BrainAtlas - Mouse McCarroll V32

HRC ASPN

7.93e-0489212442931182f7eb87f16c19774607eb14b44cd7ec7
ToppCellThalamus-Endothelial-MURAL-M1(Rgs5Acta2)-M1_1|Thalamus / BrainAtlas - Mouse McCarroll V32

HRC ASPN

7.93e-048921205ba2c31bb4bd8c7ad4bcbbefe818c08136101b2
ToppCellFrontal_cortex-Endothelial-MURAL-M1(Rgs5Acta2)-M1_3|Frontal_cortex / BrainAtlas - Mouse McCarroll V32

HRC ASPN

9.79e-04992128aab2a6989d342af387bd0823f79e7b326a12430
ToppCellFrontal_cortex-Endothelial-MURAL-M1(Rgs5Acta2)-M1_2-MURAL_Mural.Rgs5Acta2.Abcc9_(Mural.Rgs5Acta2.Abcc9)|Frontal_cortex / BrainAtlas - Mouse McCarroll V32

HRC ASPN

1.04e-0310221272ce247dad7404e6b9c971b5c29d3c6846da5efc
ToppCellFrontal_cortex-Endothelial-MURAL-M1(Rgs5Acta2)-M1_2-MURAL_Mural.Rgs5Acta2.Abcc9_(Mural.Rgs5Acta2.Abcc9)-|Frontal_cortex / BrainAtlas - Mouse McCarroll V32

HRC ASPN

1.04e-031022128c4d9483ff983538593f4e17f4a74a93cdda59c4
ToppCellFrontal_cortex-Endothelial-MURAL-M1(Rgs5Acta2)-M1_2|Frontal_cortex / BrainAtlas - Mouse McCarroll V32

HRC ASPN

1.04e-031022125feedce6d26a578c4aaba4e4824b3d0c3f3806bc
ToppCellEntopeduncular-Endothelial-MURAL-M1(Rgs5Acta2)-M1_3|Entopeduncular / BrainAtlas - Mouse McCarroll V32

HRC ASPN

1.30e-03114212108cc5b04cc7c59310eb55dc2c44ae2b8e0b05e4
ToppCellEndothelial-Endothelial-A|Endothelial / shred on cell class and cell subclass (v4)

NPM1 NCL

1.48e-0312221265849d1296934d5765afd006cbb6739383b9f49f
ToppCellHippocampus-Endothelial-MURAL-M1(Rgs5Acta2)-M1_3|Hippocampus / BrainAtlas - Mouse McCarroll V32

HRC ASPN

1.58e-03126212b0bc61be1d4ce8114077c524fedfdf89128bcf12
ToppCellThalamus-Endothelial-MURAL-M1(Rgs5Acta2)|Thalamus / BrainAtlas - Mouse McCarroll V32

HRC ASPN

1.58e-03126212333f83f9ba64d46f22fee328d0a691fd5818bdac
ToppCellThalamus-Endothelial-MURAL|Thalamus / BrainAtlas - Mouse McCarroll V32

HRC ASPN

1.58e-03126212cf571f36761da3540fb445de89d555cbce8a47ab
ToppCellSubstantia_nigra-Endothelial-MURAL-M1(Rgs5Acta2)-M1_1|Substantia_nigra / BrainAtlas - Mouse McCarroll V32

HRC ASPN

1.60e-031272128c972ea21797ee46d6c67e91cfd2e2e2ce016248
ToppCellE18.5-samps-Mesenchymal-Myofibroblast-myofibroblast_-_immature|E18.5-samps / Age Group, Lineage, Cell class and subclass

CENPB HRC

1.78e-03134212a4b9163af68e92d047b0005fd2f98aa63846b65b
ToppCellPosterior_cortex-Endothelial-MURAL-M1(Rgs5Acta2)-M1_2|Posterior_cortex / BrainAtlas - Mouse McCarroll V32

HRC ASPN

1.81e-03135212e908aacb72a8c340f06cf5b4a6b70c2faac4d027
ToppCellrenal_medulla_nuclei-Hypertensive_with+without-CKD-Epithelial-Collecting_tubule_epithelial_cell-kidney_connecting_tubule_epithelial_cell_cycling-Cycling_Connecting_Tubule_Cell_S-high|Hypertensive_with+without-CKD / Celltypes from Cells and Nuclei per compartment and clinical group

ATAD2 ASPN

1.91e-03139212c9bf98bed77415a1438f3f9e441a1346e75c26b0
ToppCellGlobus_pallidus-Endothelial-MURAL-M1(Rgs5Acta2)-M1_3-MURAL_Mural.Rgs5Acta2.Pappa2_(Mural.Rgs5Acta2.Pappa2)|Globus_pallidus / BrainAtlas - Mouse McCarroll V32

HRC ASPN

1.97e-03141212a32947b13e888850c979a54c137512e4b96d2f36
ToppCellGlobus_pallidus-Endothelial-MURAL-M1(Rgs5Acta2)-M1_3-MURAL_Mural.Rgs5Acta2.Pappa2_(Mural.Rgs5Acta2.Pappa2)-|Globus_pallidus / BrainAtlas - Mouse McCarroll V32

HRC ASPN

1.97e-031412122cb651d63466fdcce011d1dd8de409ef439d03e7
ToppCellPBMC_fresh-frozen-Mild-Moderate_progression_d02_child-Lymphocytic-Lymphocytic_T-mature_alpha-beta_T_cell-T_CD4_c05-FOS|Mild-Moderate_progression_d02_child / Compartment, severity and other cell annotations on 10x 3' data (130k)

WASL HOMEZ

2.00e-03142212ae495c8dd733f0fde66bddc281606543f21c0d4b
ToppCellGlobus_pallidus-Endothelial-MURAL-M1(Rgs5Acta2)-M1_3|Globus_pallidus / BrainAtlas - Mouse McCarroll V32

HRC ASPN

2.02e-031432129bfb3674c8f011b9cf928b522777b8d54478db8d
ToppCellEntopeduncular-Endothelial-MURAL-M1(Rgs5Acta2)-M1_1|Entopeduncular / BrainAtlas - Mouse McCarroll V32

HRC ASPN

2.14e-0314721227e97a7b1dc296f52990b5810a52ab0a7ef2b9e6
ToppCellrenal_medulla_nuclei-Hypertensive_with+without-CKD-Epithelial-Collecting_tubule_epithelial_cell-kidney_connecting_tubule_epithelial_cell_cycling|Hypertensive_with+without-CKD / Celltypes from Cells and Nuclei per compartment and clinical group

ATAD2 ASPN

2.17e-0314821218cfecd6ae20edb74f5d44ba759909df356acf3a
ToppCellPND03-Immune-Immune_Lymphocytic_T/NK-Lymphocytic_B-B-B_prolif|PND03 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif

ATAD2 NPM1

2.22e-03150212d6b977dd47aa017f6ba762f0c505cd896caa523f
ToppCellPericytes-IPF_04|World / lung cells shred on cell class, cell subclass, sample id

ASPN LDOC1

2.22e-03150212dbc202bd6db4fb5c8b2abd1200e074a2a9e63a59
ToppCellFrontal_cortex-Endothelial-MURAL|Frontal_cortex / BrainAtlas - Mouse McCarroll V32

HRC ASPN

2.25e-031512127570372a315bc312ff57bb5f483375c401ae8787
ToppCellFrontal_cortex-Endothelial-MURAL-M1(Rgs5Acta2)|Frontal_cortex / BrainAtlas - Mouse McCarroll V32

HRC ASPN

2.25e-03151212527059e47e381b2f6d63c1abb39bc0795ee3829d
ToppCell10x5'v1-week_12-13-Hematopoietic-HSC/MPP_and_pro-myeloid_DC_progenitor|week_12-13 / cell types per 3 fetal stages;per 3',per 5'

NPM1 NCL

2.28e-03152212bffbbdf1047c59e5241c99dc10b36cfe2071aa48
ToppCellE18.5-samps-Endothelial-Mature_fetal_endothelial-capillary_endothelial_Hpgd-CA4_high|E18.5-samps / Age Group, Lineage, Cell class and subclass

CASZ1 ZBTB7C

2.34e-03154212212c340a096a3a9669d1aebd61c045cf1402a868
ToppCellrenal_medulla_nuclei-CKD+DKD_normotensive-Epithelial-Renal_corpuscle_epithelial_cell-glomerular_visceral_epithelial_cell|CKD+DKD_normotensive / Celltypes from Cells and Nuclei per compartment and clinical group

WASL ZBTB7C

2.37e-03155212e7f49e2fdaf184fa6b4e685518004e7deff1316d
ToppCellrenal_medulla_nuclei-CKD+DKD_normotensive-Epithelial-Renal_corpuscle_epithelial_cell-glomerular_visceral_epithelial_cell-Podocyte|CKD+DKD_normotensive / Celltypes from Cells and Nuclei per compartment and clinical group

WASL ZBTB7C

2.37e-031552125a872ca70ae8c30b57f45a6772d7bf565e0c2663
ToppCellPND14-Immune-Immune_Lymphocytic_T/NK-Lymphocytic_B-B-B_prolif|PND14 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif

ATAD2 NPM1

2.40e-031562126f8622716bad4e505f241a2a4ef953bf3fc6dbfa
ToppCell368C-Myeloid-Monocyte-CD16+_Monocyte|368C / Donor, Lineage, Cell class and subclass (all cells)

CASZ1 RBM28

2.40e-0315621225b0936960be4955b6a6d6b8a867fdd4be548f05
ToppCellHippocampus-Endothelial-MURAL|Hippocampus / BrainAtlas - Mouse McCarroll V32

HRC ASPN

2.46e-031582122d73b5e59c650c603fec6223b1c51f0962f7bc81
ToppCellE18.5-Immune-Immune_Myeloid-Monocytic-Macrophage-AM-AM_prolif|E18.5 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif

ATAD2 NCL

2.46e-03158212f61ebe3a316e4259387cd9da83707f15e6473cae
ToppCell10x5'v1-week_14-16-Myeloid_DC-DC-DC_precursor|week_14-16 / cell types per 3 fetal stages;per 3',per 5'

NPM1 NCL

2.46e-031582125d8a345df1d3001f34740b9f2f5f92f5428bbee6
ToppCellHippocampus-Endothelial-MURAL-M1(Rgs5Acta2)|Hippocampus / BrainAtlas - Mouse McCarroll V32

HRC ASPN

2.46e-031582127f4a644534b78f7e7539cae1fd895dad6f96862b
ToppCellfacs-Heart-RV-24m-Mesenchymal|Heart / Tongue_Heart_Limb_Muscle_Aorta_Diaphragm - method, tissue, subtissue, age, lineage, cell ontology and free annotation

HRC ASPN

2.46e-031582122ef43d14ee65d004dc62c12ff209bbe12e4db681
ToppCellprimary_visual_cortex-Neuronal-GABAergic_neuron-Pvalb-Pvalb_Gpr149_Islr|primary_visual_cortex / Per Region, Lineage, Cell class, Cell type, Cell subtype

HRC CASZ1

2.49e-03159212c64fff8d89f84d1f5a0cc432e31f56f741162505
ToppCellBac-SEP-Lymphocyte-T_NK-dnT|Bac-SEP / Disease, Lineage and Cell Type

CASZ1 LDOC1

2.52e-03160212f5ca49801c981b903a85a64b21ece6b59fe91cbc
ToppCellTCGA-Stomach-Primary_Tumor-Stomach_Adenocarcinoma-Stomach_Adenocarcinoma_-_Diffuse-6|TCGA-Stomach / Sample_Type by Project: Shred V9

ATAD2 NPM1

2.62e-03163212c1a98d6776b685f20dde049715233e5c73ce3244
ToppCell356C-Myeloid-Macrophage-SPP1+_Macrophage|Myeloid / Donor, Lineage, Cell class and subclass (all cells)

MTERF4 ARMC9

2.65e-03164212d6806deabf5f5c355934387be2baae125ac33fb8
ToppCellwk_15-18-Epithelial-Airway_epithelial_progenitor-epi-stalk_intermediate|wk_15-18 / Celltypes from embryonic and fetal-stage human lung

TAF7L ZBTB7C

2.68e-031652124297588f809e8a8275ab1a6ed99daac7ad93bd61
ToppCellprimary_auditory_cortex_(A1C)-Neuronal-Glutamatergic_Excit-Glut_C-D_(RORB)-Glut_D_(IT_RORB_THEMIS_LINC00507)_3-Exc_L3_RORB_CARTPT|primary_auditory_cortex_(A1C) / Sample groups (6 Anatomical region groups), with 5 level hierarchy of cell types

TAF7L ZBTB7C

2.68e-0316521200c1d9fce3a017d05ec02133e56be371ab2148f1
ToppCell3'-Broncho-tracheal-Immune_Lymphocytic-Lymphocytic_T/NK-CD8-positive,_alpha-beta_T_cell-CD8_T_cells-CD8_T_cells_L.1.1.0.2|3' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5

HRC ASPN

2.71e-0316621226f3d5e5e30b63b09b89cda23c423d12d887631f
ToppCellPND28-Mesenchymal-Mesenchymal_structural-Fibroblastic-Chondrocyte-Chondrocyte_mature|PND28 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif

ASPN ARMC9

2.71e-0316621237794a84601a2a949d579663d4a4bb8bc8fb5923
ToppCellTCGA-Colorectal-Primary_Tumor-Colorectal_Adenocarcinoma-Colon_Adenocarcinoma-4|TCGA-Colorectal / Sample_Type by Project: Shred V9

NCL RBM28

2.71e-0316621252293b8a74d46e6161fb6a2e7e86e51fd9e89a5b
ToppCellPND28-Mesenchymal-Mesenchymal_structural-Fibroblastic-Chondrocyte|PND28 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif

ASPN ARMC9

2.71e-0316621281c546c6d847e49e662b81e71992ca0f7a99e890
ToppCellfacs-Tongue-nan-24m-Epithelial|Tongue / Tongue_Heart_Limb_Muscle_Aorta_Diaphragm - method, tissue, subtissue, age, lineage, cell ontology and free annotation

NPM1 NCL

2.75e-0316721273fdf4b81a45ec686d2929eaf641b434f70b7898
ToppCellfacs-Tongue-nan-24m|Tongue / Tongue_Heart_Limb_Muscle_Aorta_Diaphragm - method, tissue, subtissue, age, lineage, cell ontology and free annotation

NPM1 NCL

2.75e-03167212c4157fb31b44fe7c44be4215dda8ae2d37cf49a8
ToppCellControl-Myeloid-MoAM1,_IL1R2|Myeloid / Condition, Lineage and Cell class

CASZ1 LDOC1

2.75e-031672126e5140527437193f441ca96893b9a00d346614f3
ToppCelldroplet-Liver-LIVER_HEPATOCYTES-30m-Lymphocytic|Liver / Large_Intestine_Pancreas_Liver - method, tissue, subtissue, age, lineage, cell ontology and free annotation

HRC ASPN

2.75e-03167212e1b1a952fce27ab9cf16919b290625ff4a75261e
ToppCellE18.5-Mesenchymal-Mesenchymal_myocytic-Myofibroblast_vascular-Pericyte-Pericyte_prolif|E18.5 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif

ATAD2 ASPN

2.75e-03167212b0eb7a40491dd2432f5282f578ce569df86d21a7
ToppCell10x3'2.3-week_17-19-Hematopoietic-HSC/MPP_and_pro-myeloid_DC_progenitor|week_17-19 / cell types per 3 fetal stages;per 3',per 5'

NPM1 HRC

2.78e-031682122c42588ca9775270591485f9bf805fe8ab9c0671
ToppCellSubstantia_nigra-Endothelial-MURAL|Substantia_nigra / BrainAtlas - Mouse McCarroll V32

HRC ASPN

2.78e-03168212271a81c59a9a75bac6107c68fead03e7f35bc192
ToppCellSubstantia_nigra-Endothelial-MURAL-M1(Rgs5Acta2)|Substantia_nigra / BrainAtlas - Mouse McCarroll V32

HRC ASPN

2.78e-03168212b220e732eb7b204fc263a9f2e8ddae6bf9fa98f4
ToppCellfacs-Tongue-nan-24m-Epithelial-nan|Tongue / Tongue_Heart_Limb_Muscle_Aorta_Diaphragm - method, tissue, subtissue, age, lineage, cell ontology and free annotation

NPM1 NCL

2.81e-031692120054f9bfd4d377c7fd94873c1308622051c59a8e
ToppCellPosterior_cortex-Endothelial-MURAL|Posterior_cortex / BrainAtlas - Mouse McCarroll V32

HRC ASPN

2.81e-031692120ae65daf092396b71f790b65c7a2feed90397417
ToppCellfacs-Heart-LV-18m-Mesenchymal|Heart / Tongue_Heart_Limb_Muscle_Aorta_Diaphragm - method, tissue, subtissue, age, lineage, cell ontology and free annotation

ASPN ZBTB7C

2.81e-03169212849a8f8509c58d65462a09c84d58b6ecdc8934f5
ToppCellrenal_cortex_nuclei-Renal_AKI_(acute_kidney_injury)-Epithelial-Distal_tubule_epithelial_cell-kidney_distal_convoluted_tubule_epithelial_cell_cycling-Cycling_Distal_Convoluted_Tubule_Cell_S-high|Renal_AKI_(acute_kidney_injury) / Celltypes from Cells and Nuclei per compartment and clinical group

ATAD2 ASPN

2.81e-03169212e7514956b2e4298222ec443f98b2f5289451786e
ToppCellPosterior_cortex-Endothelial-MURAL-M1(Rgs5Acta2)|Posterior_cortex / BrainAtlas - Mouse McCarroll V32

HRC ASPN

2.81e-031692128cd70ce27b1cecb83f8a376230e7ef41b079b124
ToppCellPND03-Mesenchymal-Mesenchymal_structural-Fibroblastic-AF2-AF2_prolif|PND03 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif

ATAD2 ASPN

2.81e-03169212335619507857383c3b0b507cdf05d786ed59e585
ComputationalGenes in the cancer module 457.

NPM1 NCL

3.49e-0510102MODULE_457
ComputationalrRNA processing and DNA repair.

NPM1 NCL

1.18e-0418102MODULE_392
ComputationalNeighborhood of PPP1CC

NPM1 NCL

1.17e-0356102GCM_PPP1CC
ComputationalGenes in the cancer module 418.

BAZ2B ASPN

1.34e-0360102MODULE_418
ComputationalNeighborhood of TPT1

NPM1 NCL

1.82e-0370102GCM_TPT1
ComputationalNeighborhood of NPM1

NPM1 NCL

1.92e-0372102GNF2_NPM1
ComputationalNeighborhood of PSME1

NPM1 NCL

2.67e-0385102GCM_PSME1
Drug4-nitrobiphenyl

NPM1 UBTF NCL

2.53e-0628223CID000007114
Drughedamycin

CENPB ARMC9 URI1

3.81e-0632223CID000098033
Drugreverse T

NPM1 UBTF NCL

2.33e-0558223CID000064973
DrugMS-3

NPM1 NCL

2.49e-058222CID000100450
DrugThiostrepton [1393-48-2]; Down 200; 2.4uM; PC3; HT_HG-U133A

CENPB UBTF ARMC9 HIVEP2

3.12e-051912244563_DN
Drug17-AAG; Down 200; 1uM; HL60; HT_HG-U133A

DCAF1 MTERF4 UBTF URI1

3.31e-051942241166_DN
DrugAC1MM84E

NPM1 UBTF NCL

3.44e-0566223CID003256856
Drugaspartylaspartic acid

NPM1 NCL

8.05e-0514222CID000332965
Drugtoyocamycin

NPM1 UBTF

8.05e-0514222CID000011824
Druguranium

CENPB NCL ARMC9 RBM28

9.16e-05252224CID000023989
Diseaseferritin measurement

BAZ2B ZBTB7C

2.92e-03119202EFO_0004459
DiseaseIntellectual Disability

ARMC9 HIVEP2 RBM28

3.25e-03447203C3714756
DiseaseVertigo

NPM1 ARMC9

3.96e-03139202HP_0002321
Diseasehemoglobin A1 measurement

DCAF1 HMGB1P1 ZBTB7C

4.96e-03520203EFO_0007629
Diseaseelectrocardiography

CASZ1 ARMC9 HMGB1P1

5.23e-03530203EFO_0004327
DiseaseMyocardial Ischemia

NCL HIVEP2

6.26e-03176202C0151744
DiseaseX-12063 measurement

WASL HMGB1P1

6.97e-03186202EFO_0021283
DiseaseAdenocarcinoma of lung (disorder)

NPM1 NCL

8.48e-03206202C0152013
Diseasemonocyte count

BAZ2B CASZ1 ARMC9 ZBTB7C

1.09e-021320204EFO_0005091

Protein segments in the cluster

PeptideGeneStartEntry
EEEAEDDEDEDDDED

CASZ1

1686

Q86V15
DDEDEDDDEDDDDED

CASZ1

1691

Q86V15
DDDEDDDDEDDDEDD

CASZ1

1696

Q86V15
DDDEDDDEDDDDEDL

CASZ1

1701

Q86V15
EEEDEEDDEDDESDD

BAZ2B

616

Q9UIF8
DGEDEDDEDDDDDDD

ATAD2

256

Q6PL18
DDEDDDDDDDDDDDD

ATAD2

261

Q6PL18
DDDDDDDDDDDDEDD

ATAD2

266

Q6PL18
DDDDDDDEDDEDEED

ATAD2

271

Q6PL18
DTDDDDDDDDDDDDD

ASPN

36

Q9BXN1
DDDDDDDDDDDEDNS

ASPN

41

Q9BXN1
DEDDDDDDEEDDDED

NPM1

161

P06748
DDDEEDDDEDDDDDD

NPM1

166

P06748
DDDEDDDDDDFDDEE

NPM1

171

P06748
EENDDDDDDDDEEDG

RBM28

231

Q9NW13
EEDDDEDDDDTDDLD

DCAF1

1411

Q9Y4B6
WDDDEDDDDEEEEDD

LDOC1

131

O95751
ESDDDEDEDDEEDHD

ARMC9

581

Q7Z3E5
DEEEDDDSEEDEEDD

NCL

146

P19338
DDSEEDEEDDEDEDE

NCL

151

P19338
DEDDEDDEDDEDDDD

NCL

186

P19338
DDEDDEDDDDDEEDD

NCL

191

P19338
EDEEEDDEDEDDDDD

NCL

236

P19338
DDEDEDDDDDEDDED

NCL

241

P19338
DDDDDEDDEDDDDED

NCL

246

P19338
EDDEDDDDEDDEEEE

NCL

251

P19338
EEDDEEEDDEDEDDD

CENPB

516

P07199
EEDDEDEDDDDDEED

CENPB

521

P07199
EEEEEEEDDDDDDDD

HOMEZ

531

Q8IX15
NNDDDEDEDDEDEDE

TAF7L

331

Q5H9L4
EDEDDEDEDEDEDED

TAF7L

336

Q5H9L4
DDDDDDDDDDDNIDD

URI1

301

O94763
EDEDDDDEEDNDEDD

MTERF4

341

Q7Z6M4
DDEEDNDEDDNDEDD

MTERF4

346

Q7Z6M4
NDEDDNDEDDDDEDD

MTERF4

351

Q7Z6M4
NDEDDDDEDDDEAED

MTERF4

356

Q7Z6M4
DDEDDDEAEDNDEDE

MTERF4

361

Q7Z6M4
DEEEEDEEDEEDDDD

HMGB1P1

196

B2RPK0
DDDDDDDDDDDDDDD

HRC

246

P23327
TEDDDDDDDEDDDDE

RNF34

221

Q969K3
DDDDEDDDDEEENAE

RNF34

226

Q969K3
EDDKEDDDDDEDDDD

ZBTB7C

136

A1YPR0
DDDDDEDDDDEEDEE

ZBTB7C

141

A1YPR0
DEDEDEDDEEDFEDD

WASL

486

O00401
EDDEDEDDDEDDDED

UBTF

726

P17480
EDDDEDDDEDEDNES

UBTF

731

P17480
EDGDDNDDDDEDEDD

HIVEP2

1906

P31629