Cluster composition

Functions

CategoryNameIntersectionWithQueryPValueGenesInTermGenesInQueryGenesInTermInQueryID
GeneOntologyMolecularFunctionstructural constituent of postsynaptic actin cytoskeleton

POTEF POTEE POTEI POTEJ

1.83e-06111764GO:0098973
GeneOntologyMolecularFunctionminus-end-directed microtubule motor activity

DNHD1 DNAH7 DNAH1 DYNC1H1

1.62e-05181764GO:0008569
GeneOntologyMolecularFunctionmicrotubule motor activity

DNHD1 KIF21A DNAH7 DNAH1 KIF9 DYNC1H1

3.54e-05701766GO:0003777
GeneOntologyMolecularFunctiondynein light intermediate chain binding

DNHD1 DNAH7 DNAH1 DYNC1H1

1.01e-04281764GO:0051959
GeneOntologyMolecularFunctionATP-dependent activity

DNHD1 ZGRF1 KIF21A CHD9 CHD3 SMARCAD1 ATP10A DNAH7 DNAH1 LONP1 KIF9 MLH3 CHD5 SNRNP200 DYNC1H1 ATP5F1B

1.12e-0461417616GO:0140657
GeneOntologyMolecularFunctionATP hydrolysis activity

KIF21A CHD9 CHD3 SMARCAD1 ATP10A DNAH7 LONP1 KIF9 MLH3 CHD5 SNRNP200 DYNC1H1 ATP5F1B

1.52e-0444117613GO:0016887
GeneOntologyMolecularFunctionstructural constituent of postsynapse

POTEF POTEE POTEI POTEJ

1.73e-04321764GO:0099186
GeneOntologyMolecularFunctiondynein intermediate chain binding

DNHD1 DNAH7 DNAH1 DYNC1H1

3.07e-04371764GO:0045505
GeneOntologyMolecularFunctionATP-dependent chromatin remodeler activity

CHD9 CHD3 SMARCAD1 CHD5

3.07e-04371764GO:0140658
GeneOntologyMolecularFunctionstructural constituent of synapse

POTEF POTEE POTEI POTEJ

5.03e-04421764GO:0098918
GeneOntologyMolecularFunctioncytoskeletal motor activity

DNHD1 KIF21A DNAH7 DNAH1 KIF9 DYNC1H1

6.28e-041181766GO:0003774
GeneOntologyMolecularFunctionATP-dependent activity, acting on DNA

ZGRF1 CHD9 CHD3 SMARCAD1 MLH3 CHD5

9.23e-041271766GO:0008094
GeneOntologyBiologicalProcessmicrotubule-based process

DNHD1 ATF5 NDE1 KIF21A CNTRL SPIRE1 DRC1 APOB CHD3 DNAH7 AK7 DNAH1 GTF2B KIF9 CHMP4A DST NDC80 SLC16A1 ASPM ROCK1 RAB1A DYNC1H1 IQUB CFAP46

1.44e-05105817824GO:0007017
GeneOntologyBiologicalProcesscell projection assembly

TBC1D19 DNHD1 SYNE1 ICAM1 CNTRL RDX DRC1 ALPK1 DNAH7 AK7 CYFIP2 DNAH1 EHD3 ROCK1 FGD5 RAB1A IQUB CFAP46

2.82e-0568517818GO:0030031
GeneOntologyBiologicalProcessmicrotubule cytoskeleton organization

ATF5 NDE1 CNTRL SPIRE1 DRC1 CHD3 DNAH7 AK7 DNAH1 GTF2B CHMP4A DST NDC80 SLC16A1 ASPM ROCK1 DYNC1H1 CFAP46

5.37e-0572017818GO:0000226
GeneOntologyBiologicalProcesscilium organization

TBC1D19 DNHD1 SYNE1 CNTRL DRC1 ALPK1 DNAH7 AK7 DNAH1 EHD3 CEP78 RAB1A IQUB CFAP46

6.96e-0547617814GO:0044782
GeneOntologyBiologicalProcessplasma membrane bounded cell projection assembly

TBC1D19 DNHD1 SYNE1 ICAM1 CNTRL RDX DRC1 ALPK1 DNAH7 AK7 DNAH1 EHD3 ROCK1 FGD5 RAB1A IQUB CFAP46

7.30e-0567017817GO:0120031
GeneOntologyBiologicalProcesscilium movement

DNHD1 DRC1 APOB DNAH7 AK7 DNAH1 KIF9 DYNC1H1 IQUB CFAP46

9.38e-0526117810GO:0003341
GeneOntologyBiologicalProcessmicrotubule-based movement

DNHD1 NDE1 KIF21A DRC1 APOB DNAH7 AK7 DNAH1 KIF9 DST RAB1A DYNC1H1 IQUB CFAP46

1.01e-0449317814GO:0007018
GeneOntologyBiologicalProcessorganelle assembly

TBC1D19 DNHD1 NRAP SYNE1 CNTRL RDX DRC1 ALPK1 NEB CSMD2 DNAH7 AK7 DNAH1 EHD3 GTF2B KIF9 CHMP4A NDC80 ASPM RAB1A DYNC1H1 IQUB CFAP46

1.28e-04113817823GO:0070925
GeneOntologyBiologicalProcesscilium assembly

TBC1D19 DNHD1 SYNE1 CNTRL DRC1 ALPK1 DNAH7 AK7 DNAH1 EHD3 RAB1A IQUB CFAP46

1.33e-0444417813GO:0060271
GeneOntologyBiologicalProcesspostsynaptic actin cytoskeleton organization

POTEF POTEE POTEI POTEJ

1.41e-04311784GO:0098974
GeneOntologyCellularComponentaxonemal dynein complex

DNHD1 DRC1 DNAH7 DNAH1

5.97e-05251814GO:0005858
GeneOntologyCellularComponentinner dynein arm

DNHD1 DNAH7 DNAH1

7.33e-05101813GO:0036156
GeneOntologyCellularComponentmicrotubule associated complex

DNHD1 NDE1 KIF21A DRC1 DNAH7 DNAH1 KIF9 DYNC1H1

8.24e-051611818GO:0005875
GeneOntologyCellularComponentdynein complex

DNHD1 DRC1 DNAH7 DNAH1 DYNC1H1

1.03e-04541815GO:0030286
GeneOntologyCellularComponentNuA4 histone acetyltransferase complex

POTEF POTEE POTEI POTEJ

1.62e-04321814GO:0035267
GeneOntologyCellularComponentH4/H2A histone acetyltransferase complex

POTEF POTEE POTEI POTEJ

1.62e-04321814GO:0043189
GeneOntologyCellularComponenthistone acetyltransferase complex

POTEF POTEE TAF2 POTEI POTEJ KAT6B

1.68e-04941816GO:0000123
GeneOntologyCellularComponentU2-type catalytic step 1 spliceosome

PRPF8 YJU2 SNRNP200

2.17e-04141813GO:0071006
GeneOntologyCellularComponentcatalytic step 1 spliceosome

PRPF8 YJU2 SNRNP200

2.17e-04141813GO:0071012
GeneOntologyCellularComponentsupramolecular fiber

MYOT NRAP NDE1 POTEF SYNE1 TRPC1 KIF21A CFAP210 GRIN2B NEB DNAH7 DNAH1 POTEE KIF9 CHMP4A DST LMNB1 SCN1A ASPM POTEI POTEJ CSPP1 DYNC1H1

2.26e-04117918123GO:0099512
GeneOntologyCellularComponentsupramolecular polymer

MYOT NRAP NDE1 POTEF SYNE1 TRPC1 KIF21A CFAP210 GRIN2B NEB DNAH7 DNAH1 POTEE KIF9 CHMP4A DST LMNB1 SCN1A ASPM POTEI POTEJ CSPP1 DYNC1H1

2.49e-04118718123GO:0099081
GeneOntologyCellularComponentFlemming body

CNTRL BIRC6 ZFYVE19 EXOC2

2.58e-04361814GO:0090543
GeneOntologyCellularComponentaxon

GRIPAP1 RIN3 IL31RA MYOT POTEF KIF21A GRIN2B TXNRD2 GRM7 POTEE DST PTPRK SCN1A SCN3A LRP1 UNC13C POTEI POTEJ DYNC1H1

2.76e-0489118119GO:0030424
GeneOntologyCellularComponentprotein acetyltransferase complex

POTEF POTEE TAF2 POTEI POTEJ KAT6B

2.92e-041041816GO:0031248
GeneOntologyCellularComponentcytoplasmic region

DNHD1 CNTRL DRC1 CFAP210 DNAH7 DNAH1 DST UNC13C DYNC1H1 IQUB CFAP46

3.15e-0436018111GO:0099568
GeneOntologyCellularComponentacetyltransferase complex

POTEF POTEE TAF2 POTEI POTEJ KAT6B

3.76e-041091816GO:1902493
GeneOntologyCellularComponentmicrotubule organizing center

ATF5 NDE1 RBBP6 CNTRL EVC CHD3 ALPK1 TEX9 BIRC6 CEP78 NDC80 SLC16A1 ASPM LRP1 ZFYVE19 ROCK1 CSPP1 LRIF1 DYNC1H1

4.05e-0491918119GO:0005815
GeneOntologyCellularComponentaxoneme

DNHD1 CNTRL DRC1 CFAP210 DNAH7 DNAH1 IQUB CFAP46

4.57e-042071818GO:0005930
GeneOntologyCellularComponentplasma membrane bounded cell projection cytoplasm

DNHD1 CNTRL DRC1 CFAP210 DNAH7 DNAH1 DST DYNC1H1 IQUB CFAP46

4.60e-0431718110GO:0032838
GeneOntologyCellularComponentciliary plasm

DNHD1 CNTRL DRC1 CFAP210 DNAH7 DNAH1 IQUB CFAP46

4.72e-042081818GO:0097014
GeneOntologyCellularComponentH4 histone acetyltransferase complex

POTEF POTEE POTEI POTEJ

6.14e-04451814GO:1902562
GeneOntologyCellularComponentcell division site

NDE1 RDX SPIRE1 GTF2B ZFYVE19

6.55e-04801815GO:0032153
GeneOntologyCellularComponentmidbody

SYNE1 CNTRL RDX BIRC6 CHMP4A ASPM ZFYVE19 EXOC2

7.24e-042221818GO:0030496
GeneOntologyCellularComponentU2-type precatalytic spliceosome

PRPF8 SMU1 SNU13 SNRNP200

9.89e-04511814GO:0071005
GeneOntologyCellularComponentcentrosome

ATF5 NDE1 RBBP6 CNTRL CHD3 ALPK1 TEX9 BIRC6 CEP78 NDC80 SLC16A1 ASPM ZFYVE19 CSPP1 LRIF1 DYNC1H1

1.11e-0377018116GO:0005813
GeneOntologyCellularComponent9+2 motile cilium

DNHD1 SLC26A3 DRC1 DNAH7 DNAH1 KIF9 IQUB PMFBP1

1.13e-032381818GO:0097729
GeneOntologyCellularComponentprecatalytic spliceosome

PRPF8 SMU1 SNU13 SNRNP200

1.23e-03541814GO:0071011
GeneOntologyCellularComponentsarcomere

MYOT NRAP SYNE1 TRPC1 GRIN2B NEB DST SCN1A

1.51e-032491818GO:0030017
GeneOntologyCellularComponentTOM complex

TOMM7 TOMM70

1.52e-0371812GO:0140596
GeneOntologyCellularComponentbox C/D methylation guide snoRNP complex

NOP56 SNU13

1.52e-0371812GO:0031428
GeneOntologyCellularComponentbox C/D RNP complex

NOP56 SNU13

1.52e-0371812GO:0170049
GeneOntologyCellularComponentU2-type spliceosomal complex

PRPF8 YJU2 SMU1 SNU13 SNRNP200

1.56e-03971815GO:0005684
GeneOntologyCellularComponentcleavage furrow

NDE1 RDX SPIRE1 ZFYVE19

1.93e-03611814GO:0032154
GeneOntologyCellularComponentZ disc

MYOT NRAP GRIN2B NEB DST SCN1A

2.05e-031511816GO:0030018
GeneOntologyCellularComponentcilium

DNHD1 SLC26A3 CNTRL EVC DRC1 CFAP210 ALPK1 DNAH7 AK7 DNAH1 EHD3 KIF9 CEP78 PTPRK IQUB PMFBP1 CFAP46

2.11e-0389818117GO:0005929
GeneOntologyCellularComponentsperm flagellum

DNHD1 SLC26A3 DRC1 DNAH1 KIF9 IQUB PMFBP1

2.68e-032141817GO:0036126
GeneOntologyCellularComponentmyofibril

MYOT NRAP SYNE1 TRPC1 GRIN2B NEB DST SCN1A

2.68e-032731818GO:0030016
GeneOntologyCellularComponentpreribosome

NOP56 SRFBP1 UTP11 PDCD11 SNU13

3.16e-031141815GO:0030684
GeneOntologyCellularComponentI band

MYOT NRAP GRIN2B NEB DST SCN1A

3.29e-031661816GO:0031674
GeneOntologyCellularComponentcontractile muscle fiber

MYOT NRAP SYNE1 TRPC1 GRIN2B NEB DST SCN1A

3.86e-032901818GO:0043292
GeneOntologyCellularComponentmotile cilium

DNHD1 SLC26A3 DRC1 DNAH7 AK7 DNAH1 KIF9 IQUB PMFBP1

3.88e-033551819GO:0031514
DomainANK_REPEAT

POTEB3 POTEF TRPC1 POTEG POTED CAMTA2 POTEB2 POTEC POTEE POTEM ANKRD30A PLA2G6 POTEI POTEJ POTEB

1.80e-0825317615PS50088
DomainANK_REP_REGION

POTEB3 POTEF TRPC1 POTEG POTED CAMTA2 POTEB2 POTEC POTEE POTEM ANKRD30A PLA2G6 POTEI POTEJ POTEB

1.89e-0825417615PS50297
DomainAnkyrin_rpt

POTEB3 POTEF TRPC1 POTEG POTED CAMTA2 POTEB2 POTEC POTEE POTEM ANKRD30A PLA2G6 POTEI POTEJ POTEB

2.86e-0826217615IPR002110
DomainANK

POTEB3 POTEF TRPC1 POTEG POTED POTEB2 POTEC POTEE POTEM ANKRD30A PLA2G6 POTEI POTEJ POTEB

1.17e-0725117614SM00248
DomainAnkyrin_rpt-contain_dom

POTEB3 POTEF TRPC1 POTEG CAMTA2 POTEB2 POTEC POTEE POTEM ANKRD30A PLA2G6 POTEI POTEJ POTEB

1.35e-0725417614IPR020683
Domain-

POTEB3 POTEF TRPC1 POTEG CAMTA2 POTEB2 POTEC POTEE POTEM ANKRD30A PLA2G6 POTEI POTEJ

6.80e-07248176131.25.40.20
DomainAnk

POTEF POTEG POTED CAMTA2 POTEC POTEE POTEM ANKRD30A PLA2G6 POTEI POTEJ POTEB

1.77e-0622817612PF00023
DomainAnk_2

POTEB3 POTEF POTEG POTEB2 POTEC POTEE POTEM ANKRD30A PLA2G6 POTEI POTEJ

6.34e-0621517611PF12796
DomainDynein_HC_stalk

DNHD1 DNAH7 DNAH1 DYNC1H1

7.09e-06141764IPR024743
DomainDynein_heavy_dom-2

DNHD1 DNAH7 DNAH1 DYNC1H1

7.09e-06141764IPR013602
DomainDHC_N2

DNHD1 DNAH7 DNAH1 DYNC1H1

7.09e-06141764PF08393
DomainMT

DNHD1 DNAH7 DNAH1 DYNC1H1

7.09e-06141764PF12777
DomainDHC_fam

DNHD1 DNAH7 DNAH1 DYNC1H1

9.59e-06151764IPR026983
DomainDynein_heavy

DNHD1 DNAH7 DNAH1 DYNC1H1

9.59e-06151764PF03028
DomainDynein_heavy_dom

DNHD1 DNAH7 DNAH1 DYNC1H1

9.59e-06151764IPR004273
DomainActin_CS

POTEF POTEE POTEI POTEJ

1.27e-05161764IPR004001
DomainACTINS_2

POTEF POTEE POTEI POTEJ

1.65e-05171764PS00432
DomainActin/actin-like_CS

POTEF POTEE POTEI POTEJ

2.10e-05181764IPR020902
DomainACTINS_ACT_LIKE

POTEF POTEE POTEI POTEJ

2.64e-05191764PS01132
DomainP-loop_NTPase

DNHD1 ZGRF1 KIF21A CHD9 CHD3 SMARCAD1 UCK1 DNAH7 AK7 NLRC4 DNAH1 EHD3 LONP1 KIF9 CHD5 ASPM PARPBP RAB1A SNRNP200 DYNC1H1 ATP5F1B

5.09e-0584817621IPR027417
DomainActin

POTEF POTEE POTEI POTEJ

1.97e-04311764IPR004000
DomainActin

POTEF POTEE POTEI POTEJ

1.97e-04311764PF00022
DomainACTIN

POTEF POTEE POTEI POTEJ

1.97e-04311764SM00268
DomainSNF2_N

CHD9 CHD3 SMARCAD1 CHD5

2.23e-04321764IPR000330
DomainSNF2_N

CHD9 CHD3 SMARCAD1 CHD5

2.23e-04321764PF00176
DomainTopo_IA_cen_sub2

RBBP6 TOP3B

2.63e-0431762IPR013825
DomainCHD_N

CHD3 CHD5

2.63e-0431762IPR012958
DomainCHD_C2

CHD3 CHD5

2.63e-0431762IPR012957
DomainCHDCT2

CHD3 CHD5

2.63e-0431762PF08074
DomainCHDNT

CHD3 CHD5

2.63e-0431762PF08073
DomainDUF1086

CHD3 CHD5

2.63e-0431762IPR009462
DomainDUF1087

CHD3 CHD5

2.63e-0431762IPR009463
DomainDUF1087

CHD3 CHD5

2.63e-0431762PF06465
DomainDUF1086

CHD3 CHD5

2.63e-0431762PF06461
DomainDUF1087

CHD3 CHD5

2.63e-0431762SM01147
DomainDUF1086

CHD3 CHD5

2.63e-0431762SM01146
DomainDynein_heavy_chain_D4_dom

DNAH7 DNAH1 DYNC1H1

2.77e-04141763IPR024317
DomainAAA_8

DNAH7 DNAH1 DYNC1H1

2.77e-04141763PF12780
DomainNebulin

NRAP NEB

5.23e-0441762PF00880
DomainNEBULIN

NRAP NEB

5.23e-0441762PS51216
DomainNEBU

NRAP NEB

5.23e-0441762SM00227
DomainNebulin

NRAP NEB

5.23e-0441762IPR013998
DomainNebulin_repeat

NRAP NEB

5.23e-0441762IPR000900
Domain-

DNHD1 ZGRF1 CHD9 CHD3 SMARCAD1 UCK1 DNAH7 AK7 NLRC4 DNAH1 EHD3 LONP1 CHD5 RAB1A SNRNP200 DYNC1H1 ATP5F1B

7.05e-04746176173.40.50.300
DomainTPR_2

TTC9B TTC7A TOMM70 SH3TC1

1.25e-03501764PF07719
DomainTPR_2

TTC9B TTC7A TOMM70 SH3TC1

1.25e-03501764IPR013105
DomainNa_trans_cytopl

SCN1A SCN3A

1.29e-0361762PF11933
DomainNa_trans_cytopl

SCN1A SCN3A

1.29e-0361762IPR024583
DomainChromo_domain

CHD9 CHD3 CHD5

1.44e-03241763IPR023780
DomainRNA_pol_II-bd

SCAF4 RPRD2

1.80e-0371762IPR006903
DomainCTD_bind

SCAF4 RPRD2

1.80e-0371762PF04818
DomainChromo

CHD9 CHD3 CHD5

1.82e-03261763PF00385
DomainIQ

CAMTA2 SCN1A SCN3A ASPM IQUB

1.87e-03931765PS50096
DomainCHROMO_1

CHD9 CHD3 CHD5

2.27e-03281763PS00598
DomainCHROMO_2

CHD9 CHD3 CHD5

2.27e-03281763PS50013
DomainRPR

SCAF4 RPRD2

2.38e-0381762SM00582
DomainCID_dom

SCAF4 RPRD2

2.38e-0381762IPR006569
DomainCID

SCAF4 RPRD2

2.38e-0381762PS51391
Pubmed

In-Depth In Vivo Crosslinking in Minutes by a Compact, Membrane-Permeable, and Alkynyl-Enrichable Crosslinker.

NOP56 POTEF SYNE1 KIF21A CNTRL CCDC150 RDX CCDC50 APOB CHD3 CFAP210 SSRP1 NEB PRPF8 SLC30A2 CYFIP2 SCML4 IVD POTEE C9orf43 DST LMNB1 CHD5 XRN1 ASPM ANKRD30A SNU13 POTEI POTEJ SIPA1L2 RAB1A TOP3B CAVIN2 CFAP46 ATP5F1B

3.35e-1414421833535575683
Pubmed

POTE, a highly homologous gene family located on numerous chromosomes and expressed in prostate, ovary, testis, placenta, and prostate cancer.

POTEB3 POTED POTEB2 POTEC POTEJ POTEB

5.42e-138183612475935
Pubmed

Two novel transcripts encoding two Ankyrin repeat containing proteins have preponderant expression during the mouse spermatogenesis.

POTEG POTEB2 POTEC POTEM POTEB

2.28e-116183517171436
Pubmed

Nuclear actin interactome analysis links actin to KAT14 histone acetyl transferase and mRNA splicing.

RBBP6 CALR POTEF FNBP4 SPIRE1 PPA1 CYFIP2 SCAF4 YJU2 DST MKI67 ASPM SMU1 RPRD2 POTEI POTEJ SNRNP200 DYNC1H1 ATP5F1B

2.99e-115061831930890647
Pubmed

Five POTE paralogs and their splice variants are expressed in human prostate and encode proteins of different lengths.

POTEB3 POTEG POTED POTEE POTEB

7.95e-117183515276201
Pubmed

Identification of a novel actin isoform in hepatocellular carcinoma.

POTEF POTEG POTEE POTEM POTEI POTEJ

9.40e-1115183616824795
Pubmed

Gain of Additional BIRC3 Protein Functions through 3'-UTR-Mediated Protein Complex Formation.

DNHD1 NOP56 COPB1 CALR SYNE1 TRPC1 RDX APOB SMARCAD1 SEC31A PPA1 SSRP1 PRPF8 CYFIP2 TOMM70 LONP1 LMNB1 SLC16A1 MKI67 SMU1 RBM15B PDCD11 SNU13 FGD5 PLCG1 RPL35 RAB1A SNRNP200 DYNC1H1 ATP5F1B

9.44e-1114251833030948266
Pubmed

Duplication and extensive remodeling shaped POTE family genes encoding proteins containing ankyrin repeat and coiled coil domains.

POTED POTEE POTEM POTEI POTEJ

4.73e-109183516364570
Pubmed

A protein interaction landscape of breast cancer.

ZNF148 NOP56 ICAM1 SMARCAD1 SEC31A SSRP1 SCAF4 ITPR3 IVD TOMM70 LONP1 DST PIGR MKI67 SMU1 LRP1 PDCD11 TBL2 CAVIN2

1.30e-096341831934591612
Pubmed

TBK1 phosphorylation activates LIR-dependent degradation of the inflammation repressor TNIP1.

RNF168 NOP56 COPB1 RBBP6 CALR SYNE1 RDX APOB SSRP1 PRPF8 ITPR3 DST LMNB1 SLC16A1 UTP11 CHD5 MKI67 PDCD11 RPL35 TAF2 RAB1A SNRNP200 DYNC1H1

1.31e-099491832336574265
Pubmed

Defining the membrane proteome of NK cells.

PPP1R21 NOP56 COPB1 NDE1 CALR ICAM1 CNTRL PRPF8 BIRC6 CYFIP2 ITPR3 TOMM70 LONP1 LMNB1 NDC80 SLC16A1 CHD5 MKI67 XRN1 RPL35 EXOC2 FUT8 DYNC1H1 ATP5F1B

1.37e-0811681832419946888
Pubmed

The Vertebrate Genome Annotation browser 10 years on.

POTEB3 POTEF POTEG POTEB2 POTEC POTEE POTEM POTEI POTEJ POTEB

1.75e-081631831024316575
Pubmed

H4K20me0 recognition by BRCA1-BARD1 directs homologous recombination to sister chromatids.

ZNF148 RNF168 NOP56 RBBP6 FNBP4 CHD3 SSRP1 SRFBP1 PRPF8 SCAF4 ITPR3 ZSCAN29 DST LMNB1 MKI67 SMU1 RBM15B PDCD11 SNU13 RPRD2 RPL35 SNRNP200 LRIF1 TBL2 ATP5F1B

2.22e-0812941832530804502
Pubmed

ZBTB2 protein is a new partner of the Nucleosome Remodeling and Deacetylase (NuRD) complex.

NOP56 COPB1 KIF21A CHD3 SSRP1 PRPF8 LMNB1 CHD5 SMU1 PDCD11 SNU13 SNRNP200 TBL2

2.52e-083301831333301849
Pubmed

Two-Dimensional Fractionation Method for Proteome-Wide Cross-Linking Mass Spectrometry Analysis.

GRIPAP1 NOP56 COPB1 ZGRF1 KIF21A MCC RDX CHD3 SSRP1 PRPF8 CYFIP2 SCAF4 IVD NDC80 SNU13 ROCK1 RPL35 SNRNP200 DYNC1H1 ATP5F1B

2.58e-088471832035235311
Pubmed

NudCL2 regulates cell migration by stabilizing both myosin-9 and LIS1 with Hsp90.

TRHDE SYNE1 CCDC50 SMARCAD1 PRPF8 ATP10A AK7 LMNB1 RPL35 RAB1A SNRNP200 DYNC1H1 ATP5F1B

2.81e-083331831332665550
Pubmed

The Nse5/6-like SIMC1-SLF2 complex localizes SMC5/6 to viral replication centers.

ZNF148 NOP56 RBBP6 FNBP4 CCDC50 CHD3 SSRP1 MDK SRFBP1 PRPF8 CYFIP2 SCAF4 LMNB1 UTP11 MKI67 RBM15B PDCD11 SNU13 RPRD2 SNRNP200 ATP5F1B

3.74e-089541832136373674
Pubmed

BPA modulates the WDR5/TET2 complex to regulate ERβ expression in eutopic endometrium and drives the development of endometriosis.

COPB1 ICAM1 RDX SEC31A SSRP1 PRPF8 PLIN2 ITPR3 POTEE TOMM70 LONP1 LMNB1 PDCD11 SNU13 RAB1A SNRNP200 DYNC1H1 ATP5F1B

4.76e-087111831833022573
Pubmed

The HIV-1 Tat protein recruits a ubiquitin ligase to reorganize the 7SK snRNP for transcriptional activation.

NOP56 COPB1 POTEF CHD9 CHD3 PPA1 SSRP1 PRPF8 DNAH7 AK7 POTEE SCN1A CHD5 SCN3A PDCD11 SNU13 RPL35 POTEI POTEJ RAB1A SNRNP200 DYNC1H1 ATP5F1B

4.82e-0811531832329845934
Pubmed

Proteomic profiling of VCP substrates links VCP to K6-linked ubiquitylation and c-Myc function.

NOP56 COPB1 KIF21A SMARCAD1 SEC31A PPA1 SSRP1 PRPF8 BIRC6 LONP1 DST LMNB1 SLC16A1 MKI67 XRN1 ASPM SMU1 PDCD11 PLCG1 RPL35 TAF2 EXOC2 SNRNP200 DYNC1H1 ATP5F1B

5.25e-0813531832529467282
Pubmed

New interaction partners for Nek4.1 and Nek4.2 isoforms: from the DNA damage response to RNA splicing.

NBPF12 NOP56 ZGRF1 POTEF APOB NEB POTEE DST XRN1 PLA2G6 RPL35 PARPBP SNRNP200 PGM2 ATP5F1B

1.06e-075131831525798074
Pubmed

Evolution and expression of chimeric POTE-actin genes in the human genome.

POTEF POTEE POTEJ

1.43e-073183317101985
Pubmed

Characterization of cDNA clones selected by the GeneMark analysis from size-fractionated cDNA libraries from human brain.

GRIPAP1 SPIRE1 SMARCAD1 TMCC3 CYFIP2 SCAF4 TTC7A

1.60e-0776183710574461
Pubmed

SARS-CoV-2 nucleocapsid protein binds host mRNAs and attenuates stress granules to impair host stress response.

NOP56 CALR SYNE1 PPA1 PRPF8 LMNB1 SLC16A1 MKI67 SMU1 PDCD11 RPL35 SNRNP200 DYNC1H1 ATP5F1B

1.90e-074631831434901782
Pubmed

SRCAP complex promotes lung cancer progression by reprograming the oncogenic transcription of Hippo-YAP/TAZ signaling pathway.

ZNF148 NOP56 RBBP6 FNBP4 SSRP1 SCAF4 LMNB1 SLC16A1 XRN1 SMU1 PDCD11 RPRD2 TAF2 SNRNP200 DYNC1H1

2.51e-075491831538280479
Pubmed

Loss of ER retention motif of AGR2 can impact mTORC signaling and promote cancer metastasis.

NOP56 COPB1 CALR SYNE1 CNTRL PPA1 PRPF8 CYFIP2 DNAH1 TOMM70 DST LMNB1 RPL35 RAB1A SNRNP200 PGM2 DYNC1H1 ATP5F1B

3.08e-078071831830575818
Pubmed

Construction of expression-ready cDNA clones for KIAA genes: manual curation of 330 KIAA cDNA clones.

SYNE1 ALPK1 BIRC6 TTC7A DST CHD5 RPRD2 MINAR1 KAT6B SNRNP200

3.58e-072251831012168954
Pubmed

The STUbL RNF4 regulates protein group SUMOylation by targeting the SUMO conjugation machinery.

ATRN RNF168 COPB1 RBBP6 CALR CCDC50 PRPF8 CYFIP2 TMX2 LMNB1 NDC80 PTPRK SLC16A1 MKI67 RBM15B LRP1 RPL35 TAF2 FUT8 RAB1A SNRNP200 ATP5F1B

4.23e-0712031832229180619
Pubmed

Identifying biological pathways that underlie primordial short stature using network analysis.

NOP56 COPB1 CALR SYNE1 CHD3 SSRP1 PRPF8 SCAF4 ITPR3 LONP1 DST LMNB1 MKI67 SMU1 PDCD11 RPL35 RAB1A SNRNP200 DYNC1H1 ATP5F1B

5.36e-0710241832024711643
Pubmed

Identification and characterization of TSAP, a novel gene specifically expressed in testis during spermatogenesis.

POTEC POTEM POTEB

5.71e-074183317342726
Pubmed

N-Terminal Acetyltransferase Naa40p Whereabouts Put into N-Terminal Proteoform Perspective.

ZNF148 NOP56 COPB1 RBBP6 RDX CCDC50 CHD3 PPA1 PRPF8 SCAF4 DST MKI67 XRN1 RPRD2 PLCG1 RPL35 SIPA1L2 SNRNP200 ATP5F1B

5.73e-079341831933916271
Pubmed

Combinatorial targeting of a chromatin complex comprising Dot1L, menin and the tyrosine kinase BAZ1B reveals a new therapeutic vulnerability of endocrine therapy-resistant breast cancer.

ZNF148 NOP56 RBBP6 FNBP4 MRPL28 CHD3 SSRP1 PRPF8 MKI67 SMU1 RBM15B PDCD11 SNU13 RPL35 SNRNP200 TBL2 CAVIN2 ATP5F1B

6.20e-078471831835850772
Pubmed

Genetic and Proteomic Interrogation of Lower Confidence Candidate Genes Reveals Signaling Networks in β-Catenin-Active Cancers.

COPB1 RBBP6 KIF21A RDX CHD9 PPA1 SSRP1 PRPF8 CYFIP2 DNAH1 ITPR3 LONP1 LMNB1 MKI67 XRN1 SMU1 SNU13 RPL35 RAB1A TBL2 DYNC1H1 ATP5F1B

7.69e-0712471832227684187
Pubmed

SARS-CoV-2 uses Spike glycoprotein to control the host's anaerobic metabolism by inhibiting LDHB.

NOP56 COPB1 CALR PPA1 SSRP1 PRPF8 IVD TOMM70 LONP1 LMNB1 PIGR SLC16A1 PLCG1 RAB1A SNRNP200

8.87e-076071831539147351
Pubmed

HDLBP Promotes Hepatocellular Carcinoma Proliferation and Sorafenib Resistance by Suppressing Trim71-dependent RAF1 Degradation.

NOP56 COPB1 ICAM1 FNBP4 RDX APOB CHD3 SSRP1 MDK SRFBP1 PRPF8 SCAF4 LMNB1 CEP78 MKI67 SMU1 RBM15B PDCD11 SNU13 POTEJ RAB1A DYNC1H1 ATP5F1B

1.00e-0613711832336244648
Pubmed

Human plasma N-glycoproteome analysis by immunoaffinity subtraction, hydrazide chemistry, and mass spectrometry.

ATRN ICAM1 LAMA2 KERA APOB SERPINA6 PIGR ANGPTL3 LRP1 SPARCL1

1.20e-062571831016335952
Pubmed

MECP2 directly interacts with RNA polymerase II to modulate transcription in human neurons.

NOL4 NOP56 RBBP6 SYNE1 FNBP4 CHD9 SEC31A SSRP1 MDK PRPF8 SCAF4 ZSCAN29 DST LMNB1 SLC16A1 SMU1 RBM15B SIPA1L2 SNRNP200 DYNC1H1

1.25e-0610821832038697112
Pubmed

The RNA-mediated estrogen receptor α interactome of hormone-dependent human breast cancer cell nuclei.

NDE1 RBBP6 SYNE1 CCDC50 SPIRE1 SSRP1 SRFBP1 CYFIP2 SCAF4 TMX2 POTEE TOMM70 DST ZNF277 XRN1 SMU1 RBM15B PDCD11 TAF2 EXOC2 FUT8 TBL2 EDRF1 ATP5F1B

1.26e-0614971832431527615
Pubmed

RSPO-LGR4 functions via IQGAP1 to potentiate Wnt signaling.

CALR POTEF FNBP4 CHD3 PRPF8 SLC16A1 PDCD11 POTEJ SNRNP200

1.37e-06202183924639526
Pubmed

Three brain sodium channel alpha-subunit genes are clustered on the proximal segment of mouse chromosome 2.

NEB SCN1A SCN3A

1.42e-06518331679748
Pubmed

A new sodium channel alpha-subunit gene (Scn9a) from Schwann cells maps to the Scn1a, Scn2a, Scn3a cluster of mouse chromosome 2.

NEB SCN1A SCN3A

1.42e-06518338812438
Pubmed

Characterizing ZC3H18, a Multi-domain Protein at the Interface of RNA Production and Destruction Decisions.

NOP56 RBBP6 FNBP4 SSRP1 SRFBP1 PRPF8 LMNB1 SLC16A1 SMU1 RBM15B PDCD11 SNU13 RPL35 SNRNP200 TBL2 ATP5F1B

1.84e-067311831629298432
Pubmed

Systematic bromodomain protein screens identify homologous recombination and R-loop suppression pathways involved in genome integrity.

NOL4 ZNF148 RBBP6 MCC CHD9 CHD3 SMARCAD1 SSRP1 TTC7A MLH3 SH3TC1 SLC16A1 CHD5 XRN1 ASPM LRP1 FIBP TAF2 SIPA1L2 KAT6B

2.00e-0611161832031753913
Pubmed

Genome-wide CRISPR-Cas9 Screen Identifies Leukemia-Specific Dependence on a Pre-mRNA Metabolic Pathway Regulated by DCPS.

NOP56 COPB1 PRPF8 LMNB1 UTP11 MKI67 PDCD11 RPRD2 SNRNP200 LRIF1 DYNC1H1

2.12e-063401831129478914
Pubmed

Proteomic characterization of chromosomal common fragile site (CFS)-associated proteins uncovers ATRX as a regulator of CFS stability.

NOP56 RBBP6 APOB PRPF8 ITPR3 POTEE LMNB1 PIGR MKI67 SMU1 RPL35 RAB1A SNRNP200 LRIF1 ATP5F1B

2.14e-066521831531180492
Pubmed

LCP1 preferentially binds clasped αMβ2 integrin and attenuates leukocyte adhesion under flow.

NOP56 COPB1 RDX CCDC50 PRPF8 BIRC6 PLCG1 RAB1A SNRNP200 DYNC1H1 ATP5F1B

2.37e-063441831130333137
Pubmed

Upregulation of RIN3 induces endosomal dysfunction in Alzheimer's disease.

RIN3 SEC31A CYFIP2 TOMM70 LMNB1 PLCG1 RPL35 POTEJ RAB1A SNRNP200 DYNC1H1 ATP5F1B

2.50e-064181831232552912
Pubmed

HSF1 phosphorylation establishes an active chromatin state via the TRRAP-TIP60 complex and promotes tumorigenesis.

PPP1R21 NOP56 NDE1 SYNE1 CNTRL APOB SEC31A TXNRD2 SSRP1 PRPF8 TOMM70 MKI67 FGD5 RPL35 SNRNP200 DYNC1H1

2.73e-067541831635906200
Pubmed

The E3 ubiquitin ligase HECTD1 contributes to cell proliferation through an effect on mitosis.

NOP56 RBBP6 CHD3 SSRP1 PRPF8 BIRC6 CEP78 MKI67 XRN1 ASPM RBM15B PDCD11 SNU13 TOP3B SNRNP200 TBL2

2.97e-067591831635915203
Pubmed

Targeting USP10 induces degradation of oncogenic ANLN in esophageal squamous cell carcinoma.

CPNE2 NOP56 RBBP6 MRPL28 SSRP1 PRPF8 ITPR3 DST LMNB1 SLC16A1 UTP11 CHD5 MKI67 SMU1 RBM15B PDCD11 RPL35 SNRNP200 TBL2 DYNC1H1 ATP5F1B

3.27e-0612571832136526897
Pubmed

Comprehensive interactome profiling of the human Hsp70 network highlights functional differentiation of J domains.

ZNF148 NOP56 CALR SYNE1 FNBP4 MRPL28 SMARCAD1 SSRP1 PRPF8 TMCC3 ITPR3 LMNB1 SLC16A1 ASPM SMU1 PDCD11 SIPA1L2 CSPP1 TOP3B SNRNP200 TBL2 EDRF1 ATP5F1B

3.89e-0614871832333957083
Pubmed

Defining the proximal interaction networks of Arf GTPases reveals a mechanism for the regulation of PLD1 and PI4KB.

GRIPAP1 COPB1 CNTRL APOB SEC31A TEX9 BIRC6 DNAH7 DST LMNB1 MKI67 XRN1 RPL35 SNRNP200 DYNC1H1 PLEKHA8

4.00e-067771831635844135
Pubmed

CHD3 and CHD4 form distinct NuRD complexes with different yet overlapping functionality.

NOP56 FNBP4 CHD3 SSRP1 PRPF8 LMNB1 CHD5 MKI67 RBM15B PDCD11 SNU13 RPL35 SNRNP200 ATP5F1B

4.42e-066051831428977666
Pubmed

USP7 targets XIAP for cancer progression: Establishment of a p53-independent therapeutic avenue for glioma.

DNHD1 ZGRF1 SYNE1 NEB PRPF8 DST ASPM SLC4A5 SNRNP200

4.56e-06234183936243803
Pubmed

Chr21 protein-protein interactions: enrichment in proteins involved in intellectual disability, autism, and late-onset Alzheimer's disease.

ATRN COPB1 SYNE1 KIF21A RDX CHD9 SMARCAD1 SEC31A GRIN2B PRPF8 DST PTPRK LRP1 FIBP SPARCL1 PLCG1 PBX1 FUT8 SNRNP200 DYNC1H1 ATP5F1B

4.60e-0612851832135914814
Pubmed

Assembly of the U5 snRNP component PRPF8 is controlled by the HSP90/R2TP chaperones.

NOP56 KIF21A FNBP4 RDX MRPL28 SMARCAD1 SEC31A PPA1 SSRP1 PRPF8 BIRC6 GTF2B LONP1 SLC16A1 SMU1 SNU13 PLCB3 RPL35 EXOC2 SNRNP200 DYNC1H1 ATP5F1B

5.92e-0614151832228515276
Pubmed

Optimized fragmentation schemes and data analysis strategies for proteome-wide cross-link identification.

GRIPAP1 COPB1 CALR POTEF CHD3 PPA1 PRPF8 DST MKI67 RPL35 KAT6B SNRNP200 DYNC1H1

6.18e-065381831328524877
Pubmed

Anticancer sulfonamides target splicing by inducing RBM39 degradation via recruitment to DCAF15.

NOP56 COPB1 SYNE1 CHD3 SSRP1 PRPF8 LMNB1 MKI67 SMU1 SNU13 RPL35 RAB1A SNRNP200 DYNC1H1 ATP5F1B

6.39e-067141831528302793
Pubmed

BAP1 regulation of the key adaptor protein NCoR1 is critical for γ-globin gene repression.

ZNF148 NOP56 COPB1 RBBP6 CALR RDX PPA1 SSRP1 PRPF8 LONP1 LMNB1 SLC16A1 MKI67 PDCD11 SNU13 RPL35 RAB1A SNRNP200 LRIF1 DYNC1H1 ATP5F1B

6.77e-0613181832130463901
Pubmed

SETD1A Methyltransferase Is Physically and Functionally Linked to the DNA Damage Repair Protein RAD18.

NOP56 RBBP6 SSRP1 SCAF4 SMU1 RBM15B SNU13 RPL35 TAF2

8.04e-06251183931076518
Pubmed

Suppression of ACE2 SUMOylation protects against SARS-CoV-2 infection through TOLLIP-mediated selective autophagy.

COPB1 CHD3 SSRP1 PRPF8 LMNB1 SLC16A1 MKI67 SMU1 PDCD11 RPL35 EXOC2 SLC4A5 SNRNP200 ATP5F1B

8.50e-066411831436057605
Pubmed

Apical localization of a functional TRPC3/TRPC6-Ca2+-signaling complex in polarized epithelial cells. Role in apical Ca2+ influx.

TRPC1 ITPR3 PLCB3

1.18e-059183315623527
Pubmed

ZZW-115-dependent inhibition of NUPR1 nuclear translocation sensitizes cancer cells to genotoxic agents.

NOP56 RDX CCDC50 PRPF8 ITPR3 POTEE DST LMNB1 MKI67 SMU1 SNU13 POTEJ SNRNP200 CAVIN2

1.18e-056601831432780723
Pubmed

Unbiased Identification of trans Regulators of ADAR and A-to-I RNA Editing.

POTEF CHD3 SSRP1 POTEE CHD5 MKI67 RPRD2 POTEI POTEJ

1.48e-05271183932433965
Pubmed

Spatiotemporal profile of postsynaptic interactomes integrates components of complex brain disorders.

NOP56 SYNE1 KIF21A MCC RDX SEC31A GRIN2B MDK CYFIP2 EHD3 DST LMNB1 LRP1 ROCK1 RAB1A TOP3B DYNC1H1

1.48e-059631831728671696
Pubmed

Nucleolar proteome dynamics.

NOP56 CHD3 SSRP1 GTF2B LMNB1 UTP11 SNU13 RPL35 SNRNP200 DYNC1H1 ATP5F1B

1.52e-054191831115635413
Pubmed

In-depth proteomic analyses of exosomes isolated from expressed prostatic secretions in urine.

TRHDE CPNE2 ATRN HGD POTEF RDX APOB SERPINA6 OGN CYFIP2 CFHR3 POTEE PIGR POTEI POTEJ PGM2 DYNC1H1 ATP5F1B

1.57e-0510701831823533145
Pubmed

Genome-wide CRISPR screens identify novel regulators of wild-type and mutant p53 stability.

GRIPAP1 NDE1 RBBP6 ZGRF1 SMARCAD1 POTEE NDC80 ASPM ROCK1 POTEI POTEJ SIPA1L2 LRIF1

1.58e-055881831338580884
Pubmed

A protein interaction network for Ecm29 links the 26 S proteasome to molecular motors and endosomal components.

RNF168 UBE2Q1 SYNE1 DST MKI67

1.65e-0560183520682791
Pubmed

Structure of a human catalytic step I spliceosome.

PRPF8 YJU2 SNRNP200

1.67e-0510183329301961
Pubmed

Systematically defining selective autophagy receptor-specific cargo using autophagosome content profiling.

ATRN NOP56 RBBP6 CALR KIF21A RDX APOB SMARCAD1 SEC31A PRPF8 BIRC6 FOXRED2 POGLUT1 DST MKI67 PDCD11 RAB1A TOP3B PGM2 DYNC1H1

1.82e-0512971832033545068
Pubmed

NuRD subunit CHD4 regulates super-enhancer accessibility in rhabdomyosarcoma and represents a general tumor dependency.

NOP56 RBBP6 CHD3 SSRP1 CHD5 MKI67

1.83e-05103183632744500
Pubmed

Human transcription factor protein interaction networks.

NOL4 ZNF148 NOP56 COPB1 RBBP6 MRPL28 CHD3 SCAF4 LONP1 DST CHD5 MKI67 XRN1 PDCD11 RPRD2 RPL35 TAF2 PBX1 RAB1A LRIF1 DYNC1H1

2.26e-0514291832135140242
Pubmed

Biochemical Reduction of the Topology of the Diverse WDR76 Protein Interactome.

NOP56 RDX LONP1 LMNB1 LRP1 EXOC2 SNRNP200 ATP5F1B

2.26e-05219183831353912
Pubmed

CCT3 acts upstream of YAP and TFCP2 as a potential target and tumour biomarker in liver cancer.

CPNE2 POTEF POTEE LMNB1 POTEI POTEJ RAB1A DYNC1H1 ATP5F1B

2.39e-05288183931501420
Pubmed

The mRNA-bound proteome and its global occupancy profile on protein-coding transcripts.

NOP56 RBBP6 SYNE1 SSRP1 SRFBP1 PRPF8 SCAF4 UTP11 XRN1 RBM15B PDCD11 SNU13 TOP3B SNRNP200 DYNC1H1

2.67e-058071831522681889
Pubmed

Premature ligand-receptor interaction during biosynthesis limits the production of growth factor midkine and its receptor LDL receptor-related protein 1.

MDK LRP1

2.75e-052183221212259
Pubmed

Adipocyte differentiation-related protein is induced by LRP1-mediated aggregated LDL internalization in human vascular smooth muscle cells and macrophages.

PLIN2 LRP1

2.75e-052183217620659
Pubmed

Midkine drives cardiac inflammation by promoting neutrophil trafficking and NETosis in myocarditis.

MDK LRP1

2.75e-052183230647120
Pubmed

A primate-specific POTE-actin fusion protein plays a role in apoptosis.

POTEF POTEE

2.75e-052183219669888
Pubmed

Interaction of newly synthesized apolipoprotein B with calnexin and calreticulin requires glucose trimming in the endoplasmic reticulum.

CALR APOB

2.75e-052183210513896
Pubmed

Electrophysiological Differences between the Same Pore Region Mutation in SCN1A and SCN3A.

SCN1A SCN3A

2.75e-052183224990319
Pubmed

The rheumatoid arthritis shared epitope triggers innate immune signaling via cell surface calreticulin.

CALR LRP1

2.75e-052183217947714
Pubmed

Mapping of a FEB3 homologous febrile seizure locus on mouse chromosome 2 containing candidate genes Scn1a and Scn3a.

SCN1A SCN3A

2.75e-052183227690330
Pubmed

Variability in clinical phenotypes of PRPF8-linked autosomal dominant retinitis pigmentosa correlates with differential PRPF8/SNRNP200 interactions.

PRPF8 SNRNP200

2.75e-052183229087248
Pubmed

Correlations in timing of sodium channel expression, epilepsy, and sudden death in Dravet syndrome.

SCN1A SCN3A

2.75e-052183223965409
Pubmed

Antagonism between the dynein and Ndc80 complexes at kinetochores controls the stability of kinetochore-microtubule attachments during mitosis.

NDC80 DYNC1H1

2.75e-052183229475948
Pubmed

Type 1 interferon-dependent repression of NLRC4 and iPLA2 licenses down-regulation of Salmonella flagellin inside macrophages.

NLRC4 PLA2G6

2.75e-052183233177235
Pubmed

A subset of broadly responsive Type III taste cells contribute to the detection of bitter, sweet and umami stimuli.

ITPR3 PLCB3

2.75e-052183232790785
Pubmed

Neuronal migration defects in the Loa dynein mutant mouse.

DNAH1 DYNC1H1

2.75e-052183221612657
Pubmed

LRP1 is critical for the surface distribution and internalization of the NR2B NMDA receptor subtype.

GRIN2B LRP1

2.75e-052183223866919
Pubmed

Association of low-density lipoprotein receptor-related protein 1 rs11613352 and angiopoietin-like 3 rs2131925 with hypertension in men-the Tampere adult population cardiovascular risk study.

ANGPTL3 LRP1

2.75e-052183229989339
Pubmed

Selective POTE paralogs on chromosome 2 are expressed in human embryonic stem cells.

POTEE POTEJ

2.75e-052183218447647
Pubmed

PRPF8-mediated dysregulation of hBrr2 helicase disrupts human spliceosome kinetics and 5´-splice-site selection causing tissue-specific defects.

PRPF8 SNRNP200

2.75e-052183238605034
Pubmed

Genome sequencing reveals novel noncoding variants in PLA2G6 and LMNB1 causing progressive neurologic disease.

LMNB1 PLA2G6

2.75e-052183235247231
Pubmed

Rho-kinase phosphorylates COOH-terminal threonines of ezrin/radixin/moesin (ERM) proteins and regulates their head-to-tail association.

RDX ROCK1

2.75e-05218329456324
Pubmed

The inactive C-terminal cassette of the dual-cassette RNA helicase BRR2 both stimulates and inhibits the activity of the N-terminal helicase unit.

PRPF8 SNRNP200

2.75e-052183231914407
Pubmed

Prevalence of ANGPTL3 and APOB gene mutations in subjects with combined hypolipidemia.

APOB ANGPTL3

2.75e-052183222247256
Pubmed

Inhibition of RNA helicase Brr2 by the C-terminal tail of the spliceosomal protein Prp8.

PRPF8 SNRNP200

2.75e-052183223704370
Pubmed

RNA-binding proteins with basic-acidic dipeptide (BAD) domains self-assemble and aggregate in Alzheimer's disease.

NOP56 RBBP6 MRPL28 PRPF8 CYFIP2 SCAF4 CEP78 MKI67 SMU1 RBM15B SNU13 RPL35 SNRNP200 TBL2

2.76e-057131831429802200
InteractionACTC1 interactions

RBBP6 CALR POTEF SYNE1 FNBP4 SPIRE1 CHD3 PPA1 GRIN2B CYFIP2 SCAF4 POTEE YJU2 DST MKI67 ASPM SMU1 RPRD2 FGD5 POTEI POTEJ SNRNP200 DYNC1H1 ATP5F1B

1.61e-0869418124int:ACTC1
InteractionCIT interactions

NOP56 COPB1 RBBP6 CALR SYNE1 TRPC1 SPIRE1 MRPL28 APOB CHD3 SEC31A PPA1 GRIN2B SSRP1 SRFBP1 PRPF8 BIRC6 ITPR3 ZSCAN29 LONP1 LMNB1 SLC16A1 POTEM MKI67 SMU1 PDCD11 SNU13 RPL35 POTEJ RAB1A CSPP1 TOP3B SNRNP200 PGM2 DYNC1H1 ATP5F1B

2.02e-08145018136int:CIT
InteractionPOTEC interactions

POTEB3 POTEF POTEG POTED POTEC

6.71e-08131815int:POTEC
InteractionACTG2 interactions

NOP56 POTEF NEB POTEE FOXRED2 POTEI POTEJ

2.62e-07491817int:ACTG2
InteractionPOTED interactions

POTEB3 POTED POTEC

2.83e-0641813int:POTED
InteractionZBTB2 interactions

NOP56 COPB1 NDE1 KIF21A CHD3 SSRP1 PRPF8 CHMP4A LMNB1 CHD5 SMU1 PDCD11 SNU13 ROCK1 SNRNP200 TBL2

3.23e-0645018116int:ZBTB2
InteractionTNIP1 interactions

RNF168 NOP56 COPB1 RBBP6 CALR POTEF SYNE1 RDX APOB SSRP1 PRPF8 ITPR3 GTF2B DST LMNB1 NDC80 PIGR SLC16A1 UTP11 CHD5 DUSP16 MKI67 PDCD11 RPL35 TAF2 RAB1A SNRNP200 DYNC1H1

4.20e-06121718128int:TNIP1
InteractionPOTEB3 interactions

POTEB3 POTEF POTED POTEB2 POTEC

1.44e-05351815int:POTEB3
InteractionH2BC21 interactions

RIN3 RNF168 FNBP4 SSRP1 NEB PRPF8 SCAF4 ZSCAN29 TOMM70 LONP1 LMNB1 CEP78 MKI67 SMU1 RPRD2 KAT6B LRIF1 DYNC1H1 CFAP46

1.72e-0569618119int:H2BC21
InteractionKIF23 interactions

NOP56 COPB1 TRPC1 LAMA2 CHD9 CHD3 SEC31A SSRP1 PRPF8 BIRC6 ITPR3 POTEE TOMM70 LONP1 MKI67 ASPM PDCD11 SNU13 RPL35 RAB1A TOP3B SNRNP200 DYNC1H1 ATP5F1B

1.82e-05103118124int:KIF23
InteractionSYCE1 interactions

NDE1 CNTRL TEX9 NDC80 ROCK1 CNN1 EDRF1 IQUB

1.96e-051271818int:SYCE1
InteractionNIN interactions

NDE1 CNTRL TEX9 LONP1 LMNB1 NDC80 XRN1 SNU13 RPL35 TAF2 SIPA1L2 CSPP1 DYNC1H1

2.30e-0535918113int:NIN
InteractionNSUN2 interactions

CALR RDX PRPF8 GTF2B LONP1 NDC80 UTP11 PDCD11 ROCK1 PLCB3 PLCG1 RAB1A

3.72e-0532318112int:NSUN2
InteractionRPGRIP1L interactions

PPP1R21 CNTRL ZSCAN29 LONP1 NDC80 PDCD11 SNU13 SIPA1L2 CSPP1 DYNC1H1

3.78e-0522518110int:RPGRIP1L
InteractionRNPEPL1 interactions

RIN3 TMCC3 TOP3B

5.75e-0591813int:RNPEPL1
InteractionSCARB2 interactions

NOP56 PRPF8 NAALADL2 ITPR3 DST PTPRK MKI67 SMU1 PDCD11

6.94e-051951819int:SCARB2
InteractionNEK4 interactions

NBPF12 NOP56 COPB1 ZGRF1 POTEF APOB NEB POTEE DST XRN1 PLA2G6 RPL35 PARPBP SNRNP200 PGM2 ATP5F1B

7.52e-0558218116int:NEK4
InteractionRIN3 interactions

RIN3 SEC31A CYFIP2 TOMM70 LMNB1 ASPM PLCG1 RPL35 POTEJ RAB1A TOP3B SNRNP200 DYNC1H1 ATP5F1B

7.93e-0546318114int:RIN3
InteractionBMI1 interactions

SYNE1 CHD3 SEC31A PRPF8 POTEE DST MKI67 XRN1 SMU1 PDCD11 SNU13 PLCG1 RAB1A SNRNP200 LRIF1 DYNC1H1 ATP5F1B

9.71e-0565918117int:BMI1
InteractionCALR interactions

NOP56 CALR CNTRL RDX APOB SSRP1 CYFIP2 TOMM70 CEP78 ASPM LRP1 LRIF1 ATP5F1B

9.85e-0541418113int:CALR
InteractionPHB2 interactions

RIN3 SYNE1 ICAM1 CHD3 PRPF8 BIRC6 ITPR3 POTEE TOMM70 LONP1 LMNB1 FGD5 RAB1A LRIF1 ATP5F1B

1.13e-0454018115int:PHB2
InteractionNUDCD2 interactions

TRHDE SYNE1 CCDC50 SMARCAD1 PRPF8 ATP10A AK7 LMNB1 RPL35 RAB1A SNRNP200 DYNC1H1 ATP5F1B

1.25e-0442418113int:NUDCD2
InteractionNDC80 interactions

NDE1 TEX9 BIRC6 NDC80 UTP11 ASPM PDCD11 ROCK1 CSPP1 TOP3B EDRF1

1.25e-0431218111int:NDC80
InteractionSPEG interactions

RIN3 ASPM CSPP1 TOP3B

1.25e-04291814int:SPEG
InteractionYAP1 interactions

CPNE2 ZNF148 NOP56 RBBP6 POTEF FNBP4 SSRP1 PRPF8 SCAF4 POTEE LMNB1 SLC16A1 SCN1A SMU1 ZFYVE19 RPRD2 TAF2 POTEI POTEJ RAB1A SNRNP200 DYNC1H1 ATP5F1B

1.31e-04109518123int:YAP1
InteractionLGR4 interactions

CALR POTEF FNBP4 CHD3 PRPF8 SLC16A1 PDCD11 POTEJ SNRNP200 TBL2

1.34e-0426218110int:LGR4
InteractionPOTEG interactions

POTEF POTEG POTEC

1.48e-04121813int:POTEG
InteractionBIRC3 interactions

DNHD1 NOP56 COPB1 CALR SYNE1 APOB SMARCAD1 SEC31A PPA1 SSRP1 PRPF8 CYFIP2 TOMM70 LONP1 LMNB1 SLC16A1 MKI67 SMU1 RBM15B PDCD11 SNU13 RPL35 RAB1A SNRNP200 DYNC1H1 ATP5F1B

1.55e-04133418126int:BIRC3
InteractionHNRNPU interactions

RIN3 NOP56 CALR ICAM1 RDX CHD9 MRPL28 CHD3 SMARCAD1 SSRP1 PRPF8 BIRC6 DNAH1 TMX2 LMNB1 SMU1 PDCD11 SNU13 RPL35 TOP3B SNRNP200 DYNC1H1

1.57e-04103518122int:HNRNPU
Cytoband2q21.1

POTEF POTEE POTEI POTEJ

8.76e-055818342q21.1
GeneFamilyAnkyrin repeat domain containing|POTE ankyrin domain containing

POTEF POTEG POTED POTEB2 POTEC POTEE POTEM POTEI POTEJ POTEB

3.78e-201312210685
GeneFamilyAnkyrin repeat domain containing

POTEF POTEG POTED POTEB2 POTEC POTEE POTEM ANKRD30A PLA2G6 POTEI POTEJ POTEB

8.91e-0824212212403
GeneFamilyTranslocase of outer mitochondrial membrane complex

TOMM7 TOMM70

9.28e-04712221229
GeneFamilyTetratricopeptide repeat domain containing|Bardet-Biedl syndrome associated|BBSome

TTC9B TTC7A TOMM70 SH3TC1 CFAP46

1.09e-031151225769
GeneFamilySodium voltage-gated channel alpha subunits

SCN1A SCN3A

1.58e-03912221203
GeneFamilyPhospholipases

PLA2G6 PLCB3 PLCG1

2.84e-03421223467
GeneFamilySmall leucine rich repeat proteoglycans

KERA OGN

2.85e-03121222573
GeneFamilyPHD finger proteins|NuRD complex

CHD3 CHD5

2.85e-031212221305
CoexpressionDESCARTES_ORGANOGENESIS_EPENDYMAL_CELL

POTEG DRC1 CFAP210 POTEB2 DNAH7 AK7 POTEC KIF9 POTEM MANSC4 VWA3B POTEB IQUB CFAP46

1.21e-0828218214MM3642
CoexpressionRAO_BOUND_BY_SALL4_ISOFORM_B

POTEB3 GRIPAP1 FBXW10 POTEF POTEG LRRTM3 POTEB2 POTEC POTEE MLH3 DST POTEM SPARCL1 POTEI POTEJ TOP3B POTEB IQUB

1.51e-0758418218MM1080
CoexpressionAtlasFacebaseRNAseq_e10.5_Neural Epithelium Overlying Lateral Eminence_top-relative-expression-ranked_2500_k-means-cluster#5

TRHDE ATRN GRIPAP1 RNF168 RBBP6 KIF21A EVC SPIRE1 CFAP210 TEX9 NEB CYFIP2 ZSCAN29 DST DUSP16 ASPM SIPA1L2 KAT6B

1.41e-0565418218Facebase_RNAseq_e10.5_Neural Epithelium Overlying Lateral Eminence_2500_K5
CoexpressionAtlasFacebaseRNAseq_e10.5_Neural Epithelium Overlying Lateral Eminence_top-relative-expression-ranked_1000_k-means-cluster#2

RNF168 RBBP6 KIF21A SPIRE1 CFAP210 TEX9 CYFIP2 ZSCAN29 DUSP16 ASPM SIPA1L2 KAT6B

2.76e-0532818212Facebase_RNAseq_e10.5_Neural Epithelium Overlying Lateral Eminence_1000_K2
CoexpressionAtlasfacebase_RNAseq_e10.5_Emin_LatNas_2500

NOL4 RNF168 NOP56 RBBP6 SCG5 ZGRF1 KIF21A CNTRL RDX CCDC50 SPIRE1 CHD9 SMARCAD1 PPA1 PREX2 CYFIP2 ZSCAN29 NDC80 SLC16A1 MKI67 ASPM ROCK1 PARPBP CSPP1 SLC4A5 LRIF1 CNN1 PLEKHA8

4.94e-05145918228facebase_RNAseq_e10.5_Emin_LatNas_2500
ToppCellcritical-Epithelial-Ciliated|Epithelial / Severity, Lineage and Cell class of Nasopharyngeal (NS) Samples from Patients and Controls

SYNE1 CNTRL DRC1 CFAP210 TEX9 DNAH7 AK7 VWA3B CSPP1 IQUB CFAP46

6.67e-1019818311ee2c8385c0bf4ea9f5c9517b52cf131af3fbdd40
ToppCellASK452-Epithelial-Ciliated|Epithelial / Donor, Lineage and Cell class of Lung cells from Dropseq

KIF21A DRC1 CFAP210 DNAH7 AK7 KIF9 VWA3B CSPP1 IQUB CFAP46

7.94e-0919318310c0d10075862ac878aa05fc49c8b73e470783bf16
ToppCellBronchial_Brush-Epithelial-Ciliated_1|Bronchial_Brush / Tissue, Lineage and Cell class of Lung Cells from 10X

SYNE1 DRC1 CFAP210 DNAH7 AK7 KIF9 VWA3B CSPP1 IQUB CFAP46

8.34e-0919418310b4ce60c06568123008b1081d644733cb91c28f51
ToppCellASK452-Epithelial-Ciliated|ASK452 / Donor, Lineage and Cell class of Lung cells from Dropseq

KIF21A DRC1 CFAP210 TEX9 DNAH7 AK7 KIF9 VWA3B IQUB CFAP46

8.34e-09194183105aeb44657ab6f61b1abf98af28d3397d8e44c1aa
ToppCell3'-Broncho-tracheal-Epithelial-Airway_ciliated-ciliated_columnar_cell_of_tracheobronchial_tree-Multiciliated_(non-nasal)-Multiciliated_(non-nasal)_L.0.3.3.0|3' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5

FBXW10 SYNE1 CFAP210 TEX9 GRM7 DNAH7 AK7 CSPP1 IQUB CFAP46

8.34e-09194183104a2c127c90d1fefe604fcb9e796577d21b489dd6
ToppCellBronchial_Brush-Epithelial-Ciliated_1|Epithelial / Tissue, Lineage and Cell class of Lung Cells from 10X

SYNE1 DRC1 CFAP210 DNAH7 AK7 KIF9 VWA3B CSPP1 IQUB CFAP46

8.34e-09194183107a7ddccfe72a4a0dc4d1a5c809988f0069f9f1a3
ToppCellmoderate-Epithelial-Ciliated|Epithelial / Severity, Lineage and Cell class of Nasopharyngeal (NS) Samples from Patients and Controls

SYNE1 DRC1 CFAP210 TEX9 DNAH7 AK7 VWA3B CSPP1 IQUB CFAP46

8.76e-09195183103486eae5fdb062a75a907b896c9d7b396d2aa195
ToppCellNS-moderate-d_0-4-Epithelial-Ciliated|d_0-4 / Location, Severity, dps_group, Lineage and Cell class of Upper airway (combined)

SYNE1 DRC1 CFAP210 DNAH7 AK7 KIF9 VWA3B CSPP1 IQUB CFAP46

9.66e-091971831071fea4aa6ce96c7693fa94792d08770622873850
ToppCellcontrol-Epithelial-Ciliated|Epithelial / Severity, Lineage and Cell class of Nasopharyngeal (NS) Samples from Patients and Controls

SYNE1 DRC1 CFAP210 DNAH7 AK7 KIF9 VWA3B CSPP1 IQUB CFAP46

9.66e-0919718310e453d085182364ca347cbcc9dc995c62c3353016
ToppCellcontrol-Epithelial-Ciliated|control / Severity, Lineage and Cell class of Nasopharyngeal (NS) Samples from Patients and Controls

SYNE1 DRC1 CFAP210 DNAH7 AK7 KIF9 VWA3B CSPP1 IQUB CFAP46

9.66e-0919718310d4e963c1f82996371bf3d63578ee9fce8e00c5a8
ToppCellrenal_cortex_nuclei-Renal_AKI_(acute_kidney_injury)-Epithelial-Distal_tubule_epithelial_cell-kidney_distal_convoluted_tubule_epithelial_cell_cycling-Cycling_Distal_Convoluted_Tubule_Cell_G2M|Renal_AKI_(acute_kidney_injury) / Celltypes from Cells and Nuclei per compartment and clinical group

SCG5 ZGRF1 LMNB1 NDC80 SCN3A MKI67 ASPM UNC13C PARPBP

4.82e-081751839876cea684faf42ff3eb4623ad6d7a1fb1276ee02
ToppCellNasal_Brush-Epithelial-Ciliated_2|Nasal_Brush / Tissue, Lineage and Cell class of Lung Cells from 10X

SYNE1 DRC1 CFAP210 DNAH7 AK7 KIF9 VWA3B IQUB CFAP46

9.76e-0819018399ce7df056bfb24d70db4c3c4a2c57d89115de877
ToppCellNasal_Brush-Epithelial-Ciliated_2|Epithelial / Tissue, Lineage and Cell class of Lung Cells from 10X

SYNE1 DRC1 CFAP210 DNAH7 AK7 KIF9 VWA3B IQUB CFAP46

9.76e-081901839833481ace2800354712e2ce709d5cdfd0aed3d42
ToppCellBronchial_Biopsy-Epithelial-Ciliated_1|Bronchial_Biopsy / Tissue, Lineage and Cell class of Lung Cells from 10X

SYNE1 DRC1 CFAP210 DNAH7 AK7 KIF9 VWA3B IQUB CFAP46

1.07e-071921839be592e661367affced9ebe80849b466e6adb3a34
ToppCellBronchial_Biopsy-Epithelial-Ciliated_1|Epithelial / Tissue, Lineage and Cell class of Lung Cells from 10X

SYNE1 DRC1 CFAP210 DNAH7 AK7 KIF9 VWA3B IQUB CFAP46

1.11e-0719318390b62a6ddd7c42efd9f39781971d1438501e1fa8d
ToppCellIPF-Multiplet-Multiplet|IPF / Disease state, Lineage and Cell class

SYNE1 CFAP210 DNAH7 AK7 PTPRK PIGR VWA3B PBX1 CFAP46

1.22e-071951839fce0c29574bb7aab181b9c00feb42681e285d1f2
ToppCellNS-critical-LOC-Epithelial-Ciliated|LOC / Location, Severity, dps_group, Lineage and Cell class of Upper airway (combined)

KIF21A DRC1 CFAP210 DNAH7 AK7 PIGR VWA3B IQUB CFAP46

1.22e-07195183934e37cff4849696ca4ba5dd8fd2cf98fed8bc912
ToppCellIPF-Multiplet|IPF / Disease state, Lineage and Cell class

SYNE1 CFAP210 DNAH7 AK7 PTPRK PIGR VWA3B PBX1 CFAP46

1.22e-071951839eacc0449ae6f3ad8002268cd061467684c6fb9a7
ToppCellmoderate-Epithelial-Ciliated|moderate / Severity, Lineage and Cell class of Nasopharyngeal (NS) Samples from Patients and Controls

DRC1 CFAP210 TEX9 DNAH7 AK7 VWA3B CSPP1 IQUB CFAP46

1.22e-071951839e80f5cdf0b18066b3e6c2f5452e58f101c67932c
ToppCellcritical-Epithelial-Ciliated|critical / Severity, Lineage and Cell class of Nasopharyngeal (NS) Samples from Patients and Controls

DRC1 CFAP210 TEX9 DNAH7 AK7 VWA3B CSPP1 IQUB CFAP46

1.27e-07196183927b855c6e1ae44f16db998cf0e81bd686b9cee7e
ToppCellILEUM-inflamed-(7)_Endothelial_cell-(7)_CD36+_endothelial_cells|(7)_Endothelial_cell / shred on tissue, inflammation_status, cell class(v3), cell subclass (v2)

MCC RDX PPA1 TMCC3 SLC16A1 ROCK1 SPARCL1 SIPA1L2 CAVIN2

1.33e-07197183966339b5aae3952f5c484c9dcb0cfb4fbd828d4cb
ToppCellSmart-start-Cell-Wel_seq-Non-neoplastic-Glial-Neuronal-OPC-OPC-G|Smart-start-Cell-Wel_seq / Platform, Oncotype, Lineage, Cell_class, celltype (level4), mutation group

SYNE1 CCDC50 LRRTM3 CSMD2 GRM7 CYFIP2 EHD3 SCN1A LRP1

1.45e-07199183919a97e27a4758e794ce7246d295e112b47931a48
ToppCellSmart-start-Cell-Wel_seq-Non-neoplastic-Glial-Neuronal-OPC-OPC|Smart-start-Cell-Wel_seq / Platform, Oncotype, Lineage, Cell_class, celltype (level4), mutation group

SYNE1 CCDC50 LRRTM3 CSMD2 GRM7 CYFIP2 EHD3 SCN1A LRP1

1.45e-071991839e60ecbb8fa7bcd3e2ce7d78f6efb2cfd1fd77698
ToppCellSmart-start-Cell-Wel_seq-Non-neoplastic-Glial-Neuronal-OPC|Smart-start-Cell-Wel_seq / Platform, Oncotype, Lineage, Cell_class, celltype (level4), mutation group

SYNE1 CCDC50 LRRTM3 CSMD2 GRM7 CYFIP2 EHD3 SCN1A LRP1

1.45e-071991839333056c2abe9724efeab542c0365fcfe4eff8f18
ToppCellBiopsy_IPF-Epithelial-Differentiating_Ciliated|Biopsy_IPF / Sample group, Lineage and Cell type

KIF21A DRC1 CFAP210 TEX9 MDK DNAH7 KIF9 PIGR VWA3B

1.51e-0720018398dfce65e417d6dcacb871d93d1539cdf807002fe
ToppCellTCGA-Brain-Primary_Tumor-Glioblastoma-Primary_GBM-11|TCGA-Brain / Sample_Type by Project: Shred V9

POTEF POTEG PLIN2 POTEE POTEI POTEJ

2.34e-07631836d7dc1356a60cb527fe668328d5375f352239d911
ToppCell5'-Parenchyma_lung-Epithelial-Airway_ciliated-ciliated_columnar_cell_of_tracheobronchial_tree-Multiciliated_(non-nasal)-Multiciliated_(non-nasal)_L.0.3.2.2|5' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5

CFAP210 TEX9 DNAH7 DNAH1 CFHR3 VWA3B IQUB CFAP46

5.13e-071691838fba841664939c771881ba97f14ef1df6635c04ff
ToppCellPND28-Endothelial-Endothelial_blood-vessel-Microvascular_EC-EPC|PND28 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif

ZGRF1 ATP10A LMNB1 NDC80 MKI67 ASPM VWA3B PARPBP

6.40e-071741838c6087fd0e036ec7f40f0f8f17d1f6ce13ddb5235
ToppCellPND28-Endothelial-Endothelial_blood-vessel-Microvascular_EC-EPC-EPC_G2M|PND28 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif

ZGRF1 ATP10A LMNB1 NDC80 MKI67 ASPM VWA3B PARPBP

6.40e-07174183872df66319f6efbd88ecf439013d97409fbf3cb52
ToppCellrenal_cortex_nuclei-Renal_AKI_(acute_kidney_injury)-Epithelial-Distal_tubule_epithelial_cell-kidney_distal_convoluted_tubule_epithelial_cell_cycling|Renal_AKI_(acute_kidney_injury) / Celltypes from Cells and Nuclei per compartment and clinical group

SCG5 ZGRF1 LMNB1 NDC80 SCN3A MKI67 ASPM PARPBP

8.27e-071801838401df9cddcbca1eb8f0d2687bcacd98e95dc1493
ToppCellControl-Epithelial_cells-Airway_ciliated|Control / group, cell type (main and fine annotations)

DRC1 CFAP210 GRM7 DNAH7 AK7 VWA3B IQUB CFAP46

8.99e-071821838fb725d10d9ed25dfc6d5bb69cfef78513f7d3e8f
ToppCellPBMC-Mild-Myeloid-Neutrophil-immature_Neutrophil-Neu_4|Mild / Location, Disease Group, Cell group, Cell class and sub_cluster (2021.03.01)

CSMD2 POTEM CHD5 MKI67 ASPM ANKRD30A MINAR1

9.22e-07126183769b2525b92d1c7c35b21cc701f5fa52a9c1b94bb
ToppCellPBMC-Mild-Myeloid-Neutrophil-immature_Neutrophil-Neu_4|Mild / Location, Disease Group, Cell group, Cell class and sub_cluster (2021.03.09)

CSMD2 POTEM CHD5 MKI67 ASPM ANKRD30A MINAR1

9.22e-0712618376cb89754010d64875e115da6c5805efac7a4a82d
ToppCellCOVID-19-Epithelial_cells-Airway_ciliated|COVID-19 / group, cell type (main and fine annotations)

DRC1 CFAP210 GRM7 DNAH7 AK7 VWA3B IQUB CFAP46

1.02e-06185183818a40f0a338aa398d81384b5159fb80ce8a2020c
ToppCellNS-moderate-d_16-33-Epithelial-Ciliated|d_16-33 / Location, Severity, dps_group, Lineage and Cell class of Upper airway (combined)

DRC1 CFAP210 GRM7 DNAH7 AK7 VWA3B IQUB CFAP46

1.02e-0618518385e689c2fb36ce3ac2adc8d15f67107f21cf68868
ToppCellrenal_cortex_nuclei-Renal_AKI_(acute_kidney_injury)-Epithelial-Proximal_tubule_epithelial_cell-kidney_proximal_tubule_epithelial_cell_cycling-Cycling_Proximal_Tubule_Epithelial_Cell_G2M|Renal_AKI_(acute_kidney_injury) / Celltypes from Cells and Nuclei per compartment and clinical group

SCG5 ZGRF1 CCDC150 LMNB1 NDC80 MKI67 ASPM PARPBP

1.02e-06185183830e041d6f6e310d64809e9d6d93cd30052972f3b
ToppCellCOVID-19_Mild-Neu_4|COVID-19_Mild / 5 Neutrophil clusters in COVID-19 patients

CPNE2 CNTRL RDX POTEM MKI67 ASPM PLCB3 EXOC2

1.10e-061871838714851e757c71c559ee6413a3f61d6c117c79ad2
ToppCellrenal_cortex_nuclei-Renal_AKI_(acute_kidney_injury)-Epithelial-Collecting_tubule_epithelial_cell-kidney_connecting_tubule_epithelial_cell_cycling|Renal_AKI_(acute_kidney_injury) / Celltypes from Cells and Nuclei per compartment and clinical group

SCG5 ZGRF1 LMNB1 NDC80 MKI67 ASPM UNC13C PARPBP

1.10e-061871838057569c9437219ecc396aa6e673b1178a2273837
ToppCellrenal_cortex_nuclei-Renal_AKI_(acute_kidney_injury)-Immune-Myeloid-Macrophage_Dendritic-Cycling_Mononuclear_Phagocyte|Renal_AKI_(acute_kidney_injury) / Celltypes from Cells and Nuclei per compartment and clinical group

RIN3 SCG5 CNTRL LMNB1 NDC80 MKI67 ASPM PARPBP

1.10e-06187183873931a5ea73799095daff100b5f18853c57c74dc
ToppCellControl-Endothelial-Endothelial-FOXM1|Control / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2

NDE1 ZGRF1 CCDC150 LMNB1 NDC80 MKI67 ASPM PARPBP

1.19e-0618918381e1499b062d9c647c8f38b0c4e0d871d159be5dd
ToppCellPCW_13-14-Mesenchymal-Mesenchymal_fibroblastic-mes_immature_COL13A1^pos_fibro1_(4)|PCW_13-14 / Celltypes from embryonic and fetal-stage human lung

TRHDE LAMA2 NAALADL2 OGN PREX2 DST PTPRK PBX1

1.40e-0619318389f69edc97b868d23998abc98928a2e89a885ef8a
ToppCellASK440-Epithelial-Ciliated|ASK440 / Donor, Lineage and Cell class of Lung cells from Dropseq

DRC1 CFAP210 TEX9 DNAH7 AK7 KIF9 VWA3B CSPP1

1.40e-061931838a0baa8be6f590b2031fede22be588715ae458e93
ToppCell3'-Parenchyma_lung-Epithelial-Airway_ciliated-ciliated_columnar_cell_of_tracheobronchial_tree-Multiciliated_(non-nasal)-Multiciliated_(non-nasal)_L.0.3.2.3|3' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5

SYNE1 DRC1 CFAP210 DNAH7 AK7 SCN1A VWA3B CFAP46

1.40e-061931838bdb7401dd9059032f930f2b575f2ef8e504b6594
ToppCellASK440-Epithelial-Ciliated|Epithelial / Donor, Lineage and Cell class of Lung cells from Dropseq

DRC1 CFAP210 TEX9 DNAH7 AK7 KIF9 VWA3B CSPP1

1.45e-061941838c84a7fa94fb06e08aae04db56c8c313b0afde1d7
ToppCellPCW_10-12-Mesenchymal-Mesenchymal_fibroblastic-mes_immature_COL13A1^pos_fibro1_(4)|PCW_10-12 / Celltypes from embryonic and fetal-stage human lung

TRHDE LAMA2 OGN PREX2 DST PTPRK SPARCL1 PBX1

1.45e-06194183871d3c7448b1734de54187f902f65649f9283bd4c
ToppCell3'-Broncho-tracheal-Epithelial-Airway_ciliated-ciliated_columnar_cell_of_tracheobronchial_tree-Multiciliated_(non-nasal)|3' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5

DRC1 CFAP210 DNAH7 AK7 KIF9 VWA3B IQUB CFAP46

1.51e-06195183893b1559382a12cfb158aa5fac7386e38b4f87989
ToppCell3'-Broncho-tracheal-Epithelial-Airway_ciliated-ciliated_columnar_cell_of_tracheobronchial_tree-Multiciliated_(non-nasal)-Multiciliated_(non-nasal)_L.0.3.2.1|3' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5

CFAP210 TEX9 DNAH7 AK7 KIF9 PIGR VWA3B CFAP46

1.51e-0619518389651ee03738226ee10e901f8b9ec6a417eb9c301
ToppCell3'-Broncho-tracheal-Epithelial-Airway_ciliated|3' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5

DRC1 CFAP210 DNAH7 AK7 KIF9 VWA3B IQUB CFAP46

1.51e-0619518380e763f36786515698b593e5c93f6a56619c1242d
ToppCellIPF-Multiplet-Multiplet|World / Disease state, Lineage and Cell class

CFAP210 DNAH7 AK7 PTPRK PIGR VWA3B PBX1 CFAP46

1.51e-06195183821dbdc803c6947024dc2416e9e21c2ef0af9bc31
ToppCell3'-Broncho-tracheal-Epithelial-Airway_ciliated-ciliated_columnar_cell_of_tracheobronchial_tree|3' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5

DRC1 CFAP210 DNAH7 AK7 KIF9 VWA3B IQUB CFAP46

1.51e-061951838581b04220587e1d5198b1abd6965965ace7803e7
ToppCellPCW_13-14-Mesenchymal-Mesenchymal_fibroblastic|PCW_13-14 / Celltypes from embryonic and fetal-stage human lung

LAMA2 NAALADL2 OGN DST LRP1 UNC13C SPARCL1 PBX1

1.57e-0619618381450cb69c5bf469e97c03bf1890f6f7c54165b8a
ToppCellCOPD-Multiplet|COPD / Disease state, Lineage and Cell class

SYNE1 CFAP210 DNAH7 PTPRK PIGR MKI67 ASPM CFAP46

1.57e-0619618386d02d494196e3f857d53eea46d9419690d43beca
ToppCellCOPD-Multiplet-Multiplet|COPD / Disease state, Lineage and Cell class

SYNE1 CFAP210 DNAH7 PTPRK PIGR MKI67 ASPM CFAP46

1.57e-061961838af4cdc61830685a888a1209826c23bcf54a43084
ToppCellNS-control-d_0-4-Epithelial-Ciliated|d_0-4 / Location, Severity, dps_group, Lineage and Cell class of Upper airway (combined)

SYNE1 DRC1 CFAP210 DNAH7 AK7 VWA3B IQUB CFAP46

1.57e-061961838d46ab80554dd3c1cc81e1938ea2acfd5e85c6d2a
ToppCellPSB-critical-LOC-Epithelial-Ciliated|LOC / Location, Severity, dps_group, Lineage and Cell class of Upper airway (combined)

SYNE1 DRC1 CFAP210 DNAH7 AK7 VWA3B IQUB CFAP46

1.63e-0619718386865f4831eb23794fb88a8649d48d497bbae3f44
ToppCell5'-Airway_Nasal-Epithelial-Airway_ciliated|5' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5

SYNE1 KIF21A DRC1 TEX9 DNAH7 AK7 VWA3B CFAP46

1.63e-06197183891637bdeab85024b5a02d1066f76cb803a2d6420
ToppCell5'-Airway_Nasal-Epithelial-Airway_ciliated-ciliated_columnar_cell_of_tracheobronchial_tree|5' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5

SYNE1 KIF21A DRC1 TEX9 DNAH7 AK7 VWA3B CFAP46

1.63e-06197183822c87dd15dc57bd0aa98a204c9fc9b3b9b573b45
ToppCell5'-Airway_Nasal-Epithelial-Airway_ciliated-ciliated_columnar_cell_of_tracheobronchial_tree-Multiciliated_(non-nasal)-Multiciliated_(non-nasal)_L.0.3.0.0|5' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5

SYNE1 KIF21A DRC1 TEX9 DNAH7 AK7 VWA3B CFAP46

1.63e-0619718383bbf068d2ad8196fbc85d3f311a7c54c9aece856
ToppCellPCW_13-14-Mesenchymal|PCW_13-14 / Celltypes from embryonic and fetal-stage human lung

LAMA2 MDK OGN DST LRP1 UNC13C SPARCL1 PBX1

1.63e-06197183873a2085d2682d636726a5432d572ae2a3fbe1c3f
ToppCell5'-Airway_Nasal-Epithelial-Airway_ciliated-ciliated_columnar_cell_of_tracheobronchial_tree-Multiciliated_(non-nasal)|5' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5

SYNE1 KIF21A DRC1 TEX9 DNAH7 AK7 VWA3B CFAP46

1.63e-06197183887db09f341e2b20eb6e1c3e917cb5c960387b3e9
ToppCellLPS_anti-TNF-Endothelial-Endothelial-FOXM1|LPS_anti-TNF / Treatment groups by lineage, cell group, cell type

ZGRF1 CNTRL CCDC150 LMNB1 NDC80 MKI67 ASPM PARPBP

1.75e-06199183898575fcce726589e93fbb4df1aab03e57cb56076
ToppCellLPS_IL1RA-Endothelial-Endothelial-FOXM1|LPS_IL1RA / Treatment groups by lineage, cell group, cell type

ZGRF1 CNTRL CCDC150 LMNB1 NDC80 MKI67 ASPM PARPBP

1.75e-061991838be2276c9a1994579ba1d2998b49bf549c1324d44
ToppCellLPS_anti-TNF-Mesenchymal_fibroblastic-Fibroblasts-MatrixFB|LPS_anti-TNF / Treatment groups by lineage, cell group, cell type

TRHDE SYNE1 ALPK1 OGN PREX2 DST LRP1 SPARCL1

1.82e-0620018389b0916d8d07ac2bf1739f7be5296bf77ffee6094
ToppCellLPS_IL1RA_TNF-Endothelial-Endothelial-FOXM1|LPS_IL1RA_TNF / Treatment groups by lineage, cell group, cell type

ZGRF1 CNTRL CCDC150 LMNB1 NDC80 MKI67 ASPM PARPBP

1.82e-0620018384cfe08878a6981bf7b3567f9e82192d8f060ddde
ToppCellControl_saline-Endothelial-Endothelial-FOXM1|Control_saline / Treatment groups by lineage, cell group, cell type

ZGRF1 CNTRL CCDC150 LMNB1 NDC80 MKI67 ASPM PARPBP

1.82e-0620018389bbc7b5561151f6ff65f40b3226271def732e5d9
ToppCellBiopsy_Control_(H.)-Epithelial-Differentiating_Ciliated|Biopsy_Control_(H.) / Sample group, Lineage and Cell type

DRC1 CFAP210 MDK DNAH7 KIF9 VWA3B IQUB CFAP46

1.82e-062001838a552a99f5e4fa00dfb7775e5a3e1f62f1530d104
ToppCell(09)_Interm._secr.>cil.|World / shred by cell type by condition

SYNE1 CNTRL CFAP210 DNAH7 AK7 KIF9 VWA3B CSPP1

1.82e-0620018383305e14dba12e94da42f0414fdc7a2c8caf0a183
ToppCellLung_Parenchyma-Severe-Epithelial-Epithelial-Ciliated|Severe / Location, Disease Group, Cell group, Cell class and sub_cluster (2021.03.01)

DRC1 CFAP210 TEX9 DNAH7 AK7 VWA3B IQUB CFAP46

1.82e-062001838f1a49bc818054fb0734d3b84725ee6487b034567
ToppCellParenchymal-NucSeq-Epithelial-Epi_alveolar-Dividing_AT2|NucSeq / Cell types per location group and 10X technology with lineage, and cell group designations

ZGRF1 CCDC150 EVC LMNB1 NDC80 MKI67 ASPM PARPBP

1.82e-062001838af3dc76b4507bf4edd265169f5dfbbb8a19eb394
ToppCellBrain_organoid-organoid_Tanaka_cellReport-2m-Neuronal-Intermediate|2m / Sample Type, Dataset, Time_group, and Cell type.

ZNF148 TTC9B SCG5 CHD3 PPA1 GRIN2B DST KAT6B

1.82e-0620018382a635694844ddabcd98462c5636a6f41a3f08a46
ToppCellbackground-Hepatocytes|background / Sample and Cell Type and Tumor Cluster (all cells)

HGD ATF5 FMO5 APOB SERPINA6 PLIN2 CFHR3 ANGPTL3

1.82e-062001838787d35b5c2f2ad967ae14e99496a0299ac7e72fd
ToppCellBrain_organoid-organoid_Tanaka_cellReport-3m-Mesenchymal-Cilia-bearing_cell|3m / Sample Type, Dataset, Time_group, and Cell type.

DRC1 CFAP210 TEX9 DNAH7 AK7 KIF9 SLC4A5 IQUB

1.82e-0620018380d14a950172a56b11fdebee8f4e13b0c10e0d592
ToppCellParenchyma_COVID-19-Epithelial-TX-Ciliated|Parenchyma_COVID-19 / Sample group, Lineage and Cell type

DRC1 CFAP210 TEX9 DNAH7 AK7 VWA3B IQUB CFAP46

1.82e-062001838d7ae09189cf0b7e2f7e7fc6b0921975b75aa7d62
ToppCellLung_Parenchyma-Severe-Epithelial-Epithelial-Ciliated-|Severe / Location, Disease Group, Cell group, Cell class and sub_cluster (2021.03.01)

DRC1 CFAP210 TEX9 DNAH7 AK7 VWA3B IQUB CFAP46

1.82e-062001838cf59110547cc66b5f4a2999735336b0309ba9b0d
ToppCellfacs-Marrow-Granulocytes-3m-Hematologic|Marrow / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation

TBC1D19 KIF21A SPIRE1 CFAP210 LONP1 MLH3 PLA2G6

3.68e-061551837cd2f3ad4f131588325a667b6724e530d821fbe30
ToppCellfacs-Marrow-Granulocytes-3m-Hematologic-hematopoietic_stem_cell|Marrow / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation

TBC1D19 KIF21A SPIRE1 CFAP210 LONP1 MLH3 PLA2G6

3.68e-0615518374246709e27703b94529369abbed5763e4002e79d
ToppCellfacs-Marrow-Granulocytes-3m-Hematologic-MPP_Fraction_B|Marrow / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation

TBC1D19 KIF21A SPIRE1 CFAP210 LONP1 MLH3 PLA2G6

3.68e-0615518379b26ade19488511c72b64335011d2dcd81e8f167
ToppCellrenal_medulla_nuclei-Hypertensive_with+without-CKD-Epithelial-Proximal_tubule_epithelial_cell-kidney_proximal_tubule_epithelial_cell_cycling-Cycling_Proximal_Tubule_Epithelial_Cell_G2M|Hypertensive_with+without-CKD / Celltypes from Cells and Nuclei per compartment and clinical group

SCG5 ZGRF1 LMNB1 NDC80 MKI67 ASPM PARPBP

5.55e-061651837eec2d327c94832d1390314c93ef6a2be4648478b
ToppCellsaliva-Severe-critical_progression_d28-40-Lymphocytic-Lymphocytic_B-B_cell-B_c01-TCL1A|Severe-critical_progression_d28-40 / Compartment, severity and other cell annotations on 10x 3' data (130k)

KIF21A SERPINA6 DNAH1 POTEI CSPP1 IQUB CFAP46

6.25e-0616818379a8709d34865cfa668d8f3335dc34fc86fc32482
ToppCellLPS-IL1RA+antiTNF-Endothelial-Endothelial-FOXM1|LPS-IL1RA+antiTNF / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2

ZGRF1 CCDC150 LMNB1 NDC80 MKI67 ASPM PARPBP

6.50e-061691837e0607af8ae8609d43e26ff2a2cab92650bfcd5b7
ToppCellTCGA-Cervix-Primary_Tumor-Endocervical_Adenocarcinoma|TCGA-Cervix / Sample_Type by Project: Shred V9

HGD FMO5 DRC1 CFAP210 SLC30A2 DNAH7 PIGR

6.75e-061701837d682178d11d67eb5a02d0c6b3967645e37bcc62a
ToppCell10x5'-Lung-Lymphocytic_T_CD4/8-lo-Cycling_T|Lung / Manually curated celltypes from each tissue

ZGRF1 FOXRED2 LMNB1 NDC80 MKI67 ASPM PARPBP

7.02e-061711837976361f67dd725870e0513ae7a92f2dcaee17148
ToppCell5'-Adult-LargeIntestine-Epithelial-neuro-epithelial-EC_cells_(TAC1+)|Adult / Celltypes from developing, pediatric, Crohn's, & adult GI tract

HGD NOL4 SCG5 POTEE SCN3A POTEI POTEJ

8.16e-061751837182e45f5c02214d6b9f317ff5dc43af8b42de978
ToppCellFetal_29-31_weeks-Epithelial-ciliated_cell-D062|Fetal_29-31_weeks / Lineage, Cell type, age group and donor

DRC1 CFAP210 DNAH7 AK7 VWA3B IQUB CFAP46

9.12e-061781837de5d50d7ca9ee9eb62f50c88a0c6d47f0694b2e6
ToppCell3'-Parenchyma_lung-Epithelial-Airway_ciliated-multi-ciliated_epithelial_cell-Deuterosomal|3' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5

NOL4 CFAP210 FAM217A KIF9 CEP78 CSPP1 CFAP46

9.80e-0618018370c146e80d55d18b6988dd21b1da635801bd3140c
ToppCell3'-Parenchyma_lung-Epithelial-Airway_ciliated-multi-ciliated_epithelial_cell|3' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5

NOL4 CFAP210 FAM217A KIF9 CEP78 CSPP1 CFAP46

9.80e-061801837e9af22beae2f3c7fe213b4e19df84abfd2453433
ToppCellLPS-IL1RA-Endothelial-Endothelial-FOXM1|LPS-IL1RA / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2

ZGRF1 CCDC150 LMNB1 NDC80 MKI67 ASPM PARPBP

9.80e-061801837334e2b1f6eb7d4ece20b1c7b02107863f913237f
ToppCell3'-Parenchyma_lung-Epithelial-Airway_ciliated-multi-ciliated_epithelial_cell-Deuterosomal-Deuterosomal_L.0.3.4.0|3' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5

NOL4 CFAP210 FAM217A KIF9 CEP78 CSPP1 CFAP46

9.80e-06180183711455ba704ac73f69b474845136cfecec6a88349
ToppCellrenal_cortex_nuclei-Renal_AKI_(acute_kidney_injury)-Epithelial-Collecting_tubule_epithelial_cell-kidney_connecting_tubule_epithelial_cell_cycling-Cycling_Connecting_Tubule_Cell_G2M|Renal_AKI_(acute_kidney_injury) / Celltypes from Cells and Nuclei per compartment and clinical group

SCG5 LMNB1 NDC80 MKI67 ASPM UNC13C PARPBP

1.05e-051821837336cd05e46a741185ce3c59ee67a4b07fa6a5101
ToppCell343B-Lymphocytic-CD4_T-cell-Treg_cell_1|Lymphocytic / Donor, Lineage, Cell class and subclass (all cells)

SRFBP1 SCAF4 YJU2 SLC16A1 DUSP16 SPARCL1 PLCG1

1.09e-051831837807d64deaf4e50dccf6f831f88578a6d903c1421
ToppCellfacs-Thymus-Thymus_Epithelium-18m-Lymphocytic-thymocyte|Thymus / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation

TRHDE NOL4 APOB GRIN2B NEB DNAH1 UNC13C

1.13e-0518418372cbed6462fea2622871bb7e49b0df3d984239281
ToppCellfacs-Thymus-Thymus_Epithelium-18m-Lymphocytic-proliferating_thymocyte;_DN_to_DP_transition,_dividing_(some_are_Cd8+/_Cd4+,_some_undergoing_VDJ_recombination)|Thymus / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation

TRHDE NOL4 APOB GRIN2B NEB DNAH1 UNC13C

1.13e-0518418372b19a8c5f823e00812908b23e66bb4e563278aff
ToppCellChildren_(3_yrs)-Epithelial-ciliated_cell-D139|Children_(3_yrs) / Lineage, Cell type, age group and donor

DRC1 CFAP210 DNAH7 AK7 VWA3B IQUB CFAP46

1.13e-0518418375daff849625f2f41d56615569c0ed59cd733b34c
ToppCellfacs-Thymus-Thymus_Epithelium-18m-Lymphocytic|Thymus / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation

TRHDE NOL4 APOB GRIN2B NEB DNAH1 UNC13C

1.13e-051841837ea7a7e2bac46d4d2c31a5d576b38a032b5335062
ToppCellFetal_29-31_weeks-Epithelial-ciliated_cell-D150|Fetal_29-31_weeks / Lineage, Cell type, age group and donor

DRC1 CFAP210 DNAH7 AK7 VWA3B IQUB CFAP46

1.17e-0518518373e39a3cb534dfe2301930f3e2f7e8cefb522c158
ToppCell10x5'-bone_marrow-Myeloid_Dendritic-Cycling_Dendritic|bone_marrow / Manually curated celltypes from each tissue

CCDC150 CCDC50 DST LMNB1 NDC80 MKI67 ASPM

1.17e-0518518379d3168c7f0b1d739f78b368969cf5c77ce202b97
ToppCellNS-moderate-d_07-13-Epithelial-Ciliated|d_07-13 / Location, Severity, dps_group, Lineage and Cell class of Upper airway (combined)

DRC1 CFAP210 DNAH7 AK7 VWA3B IQUB CFAP46

1.21e-05186183785787ff207f109ec7e3c0f729ba9bda739c2fdc9
ToppCell343B-Lymphocytic-CD4_T-cell-Treg_cell_1|CD4_T-cell / Donor, Lineage, Cell class and subclass (all cells)

ICAM1 SCAF4 YJU2 SLC16A1 DUSP16 SPARCL1 PLCG1

1.21e-05186183776cbc3610aedf8c19c17ad5faf6ef5e8980b6af5
ToppCellNS-critical-d_16-33-Epithelial-Ciliated|d_16-33 / Location, Severity, dps_group, Lineage and Cell class of Upper airway (combined)

DRC1 CFAP210 DNAH7 AK7 VWA3B IQUB CFAP46

1.21e-05186183776033438426d8f9c72cd6691a7baf92104c9f03d
ToppCelltumor_Lung-Epithelial_cells-tS3|Epithelial_cells / Location, Cell class and cell subclass

DRC1 CFAP210 DNAH7 KIF9 VWA3B CSPP1 CFAP46

1.26e-0518718373cea677279e71fdb9879530dea10a5e6393beacd
DiseaseColorectal Carcinoma

MYOT CALR SCG5 SYNE1 MCC APOB PREX2 GTF2B MLH3 SH3TC1 CHD5 MKI67 LRP1 SNRNP200 EDRF1 IQUB

3.11e-0670216916C0009402
Diseaseepilepsy (implicated_via_orthology)

NDE1 GRIN2B SCN1A SCN3A LRP1 UNC13C DYNC1H1

4.49e-051631697DOID:1826 (implicated_via_orthology)
DiseaseIntellectual Disability

SYNE1 MCC CHD3 GRIN2B TMX2 ALKBH8 SCN1A SCN3A TAF2 FUT8 DYNC1H1

5.78e-0544716911C3714756
Diseasemuscular dystrophy (is_implicated_in)

MYOT SYNE1 LAMA2

1.18e-04171693DOID:9884 (is_implicated_in)
Diseasetriglyceride measurement, phospholipid measurement

COPB1 APOB DNAH1 PLA2G6 PLCB3 PMFBP1

2.02e-041461696EFO_0004530, EFO_0004639
Diseasecongenital muscular dystrophy (implicated_via_orthology)

LMNB1 DYNC1H1

4.82e-0461692DOID:0050557 (implicated_via_orthology)
Diseasebipolar disorder (is_implicated_in)

SYNE1 GRIN2B KAT6B

6.04e-04291693DOID:3312 (is_implicated_in)
Diseasediffuse large B-cell lymphoma (is_marker_for)

ICAM1 MKI67

8.93e-0481692DOID:0050745 (is_marker_for)
DiseaseColorectal Neoplasms

CALR SCG5 SYNE1 MLH3 SH3TC1 CHD5 MKI67

1.13e-032771697C0009404
Diseasesevere acute respiratory syndrome, COVID-19

RIN3 POTEF DRC1 GRM7 PREX2 UNC13C PBX1 SIPA1L2 PGM2

1.15e-034471699EFO_0000694, MONDO_0100096
DiseaseProfound Mental Retardation

MCC GRIN2B SCN1A TAF2 DYNC1H1

1.26e-031391695C0020796
DiseaseMental Retardation, Psychosocial

MCC GRIN2B SCN1A TAF2 DYNC1H1

1.26e-031391695C0025363
DiseaseMental deficiency

MCC GRIN2B SCN1A TAF2 DYNC1H1

1.26e-031391695C0917816
Diseasestomach cancer (is_marker_for)

CALR TRPC1 NDC80 MKI67 ASPM

1.38e-031421695DOID:10534 (is_marker_for)
Diseasegeneralized epilepsy with febrile seizures plus 2 (implicated_via_orthology)

SCN1A SCN3A

1.42e-03101692DOID:0111294 (implicated_via_orthology)
DiseaseDravet syndrome (implicated_via_orthology)

SCN1A SCN3A

1.42e-03101692DOID:0080422 (implicated_via_orthology)
DiseaseHypercholesterolemia

ICAM1 APOB ANGPTL3

1.45e-03391693C0020443
Diseaseclinical treatment

SPIRE1 APOB GRIN2B

1.68e-03411693EFO_0007056
Diseasetriglyceride measurement, very low density lipoprotein cholesterol measurement

COPB1 APOB DNAH1 PLA2G6 PLCB3 PMFBP1

1.90e-032241696EFO_0004530, EFO_0008317
DiseaseEmery-Dreifuss muscular dystrophy (implicated_via_orthology)

SYNE1 LMNB1

2.07e-03121692DOID:11726 (implicated_via_orthology)
Diseaseniacinamide measurement

NAALADL2 EXOC2

2.07e-03121692EFO_0010511
Diseasegeneralized epilepsy with febrile seizures plus (implicated_via_orthology)

SCN1A SCN3A

2.07e-03121692DOID:0060170 (implicated_via_orthology)
Diseaselung non-small cell carcinoma (is_marker_for)

CALR ICAM1 PREX2 NDC80 MKI67

2.96e-031691695DOID:3908 (is_marker_for)
DiseaseMyopia

GJD2 LAMA2

3.26e-03151692C0027092
DiseasePeripheral Nervous System Diseases

MYOT ICAM1 MKI67

3.70e-03541693C4721453
Diseaseprimary autosomal recessive microcephaly (is_implicated_in)

LMNB1 ASPM

3.71e-03161692DOID:0070296 (is_implicated_in)
Diseaseblood arsenic measurement

CFHR3 FGD5

5.23e-03191692EFO_0021527
Diseasecholesterol:total lipids ratio, high density lipoprotein cholesterol measurement

APOB BIRC6 DNAH1 PLA2G6 PLCB3 PMFBP1

5.28e-032761696EFO_0004612, EFO_0020943

Protein segments in the cluster

PeptideGeneStartEntry
LSEALKRNGKYVNIQ

TRHDE

571

Q9UKU6
QELQTAKKYGTKNKR

CHMP4A

46

Q9BY43
KERQALKNALGKAQF

CNTRL

746

Q7Z7A1
QRKKKNYKNSGIIIL

CPNE2

271

Q96FN4
RQANQEKKLGEYSKK

BIRC6

4496

Q9NR09
GAQAKRKSIYEIRNK

GJD2

286

Q9UKL4
AQYQVKKQIELKSRG

CSMD2

301

Q7Z408
DLKAQAQLQKRYKDL

CCDC50

66

Q8IVM0
KGKRIRKQVNYNDAS

CHD5

1341

Q8TDI0
KKFNRAKLLNVGYLE

B4GALT4

166

O60513
KYLRGNRNSQGKKEE

ALKBH8

516

Q96BT7
IYNRSRINLSKKEGK

FBXW10

86

Q5XX13
AQRKSKSLKINLNYA

ANKRD30A

1256

Q9BXX3
AQLANKEKNYGQAKK

CFAP46

1646

Q8IYW2
NKGSFLTKKQDQAAR

CAMTA2

1156

O94983
YLQGQRLDNVVAKKS

SCG5

186

P05408
NNLNGKYNKPRAKSK

ANGPTL3

411

Q9Y5C1
IKKVLQNGRSAKSEY

CEP78

306

Q5JTW2
TVIQKLAAKYQQGQK

DNHD1

4106

Q96M86
KGKIERTNYLQKRAA

ASPM

1526

Q8IZT6
NGKKAGLYKENLLLR

ATP10A

251

O60312
ARGVQKILQDYKSLQ

ATP5F1B

421

P06576
DYLTVKKKGRQRNAF

ALPK1

1036

Q96QP1
PQNYKKRVAALEAKQ

ZFYVE19

146

Q96K21
KQKKRDQNKSAALRY

ATF5

211

Q9Y2D1
QALVYDAIKGNGRKK

IGDCC4

1106

Q8TDY8
RYASENVNKLLVGNK

RAB1A

111

P62820
LRNLVSYLKQKQAAG

RBM15B

821

Q8NDT2
NDSQNRLYGKLAKVA

PARPBP

541

Q9NWS1
QRLNIQKGKLNTDLY

GOLGA8S

136

H3BPF8
QMLLKKTKYGDRGNQ

ITPR3

1671

Q14573
KKKANLNALDRYGRT

POTEB2

256

H3BUK9
QNKERKTGFKLNLYT

KAT6B

1261

Q8WYB5
KYKTLRQIRQGNTKQ

RDX

561

P35241
RKNPKLVDAEYTKNQ

POGLUT1

226

Q8NBL1
MGINYRLLAKEQKAN

SLC16A1

441

P53985
EALLAALGYKNVKKQ

MMTAG2

76

Q9BU76
LIKKKANLNALDRYG

POTEF

291

A5A3E0
NKRIRYKKNIGKFQE

PBX1

286

P40424
AAKNKGRISRYLANK

NOP56

361

O00567
IKKRKTENAYNAIIN

LRIF1

641

Q5T3J3
KLNKQDIRYLGKIFS

NLRC4

671

Q9NPP4
AKKANQLASQVEYKR

NRAP

181

Q86VF7
AKKAGQLVSEKNYRQ

NRAP

706

Q86VF7
AKNRKDKNQTYNLTG

IL31RA

176

Q8NI17
KNQNKKHYGTIRTLL

EDRF1

471

Q3B7T1
KVRQGTLKKARYNAQ

MDK

101

P21741
ITNELAYKILNGRQK

DST

1881

Q03001
KKQINVARLDGSFKN

LRP1

1681

Q07954
VYKEKSGAVRNRKQQ

ATRN

1406

O75882
YAKKESDLNGAQIKL

LMNB1

121

P20700
KRQANKKSEGSLAYV

EXOC2

191

Q96KP1
YEKQQAQGSGRKKLL

MLH3

1241

Q9UHC1
LRYVALVQEKKKQNS

COPB1

566

P53618
KLERNKEYNQFLRGK

CSPP1

176

Q1MSJ5
QKDGKYRLKNTLAVA

FGD5

1146

Q6ZNL6
KKLFENLRNYDGKNN

PGM2

491

Q96G03
NYKQLRKGANEATKT

SNU13

31

P55769
GLNSSKQLLNKTKGY

MANSC4

251

A6NHS7
KQLLNKTKGYNSRNH

MANSC4

256

A6NHS7
LFNAKYNKIKSRGIK

OGN

191

P20774
NLQKQVEKVLRKSAY

LONP1

711

P36776
NLDGLKKNYNKLADS

LAMA2

2061

P24043
KSQKENVLQYCRKSG

MKI67

251

P46013
LNFQKSLREKQGKYE

KIF9

631

Q9HAQ2
LVGNIKKVNQKYITN

PLEKHA8

361

Q96JA3
EYSKLRAQNQVLKKG

PPP1R21

16

Q6ZMI0
GNVSNIYKLDAKKRI

CYFIP2

276

Q96F07
RKLISINKRYTGKAN

FOXRED2

76

Q8IWF2
VRNGNEAQKEKYLPK

IVD

141

P26440
DILNNLRSKYAKQIK

DRC1

346

Q96MC2
NFKNETGYTKRLRKQ

RBBP6

321

Q7Z6E9
LIKKKANLNALDRYG

POTEB3

291

A0JP26
LIKKKANLNALDRYG

POTEE

291

Q6S8J3
AYTKLKLQVNQDGRI

PLCB3

156

Q01970
KQTYKQQGNTVLKLG

DNAH1

3296

Q9P2D7
SDGRVKYTLNKNSLK

APOB

1281

P04114
KKIDQSRDYKNGNQL

CHD9

846

Q3L8U1
KRANSNLVAAYEKAK

MCC

766

P23508
NKNNIKLKGRSDRKY

CFHR3

276

Q02985
TESKNKLAYENGKLQ

CCDC150

551

Q8NCX0
NLGKGKRVRKQVNYN

CHD3

1336

Q12873
SLANKYLEKKINQRF

FMO5

251

P49326
VNIAVNYLKKLRDQG

LINC00032

86

P0C843
KLHNLKTEGYRKQQQ

C9orf43

281

Q8TAL5
NFLGQLLDYEKKIKN

DUSP16

286

Q9BY84
EAIQNNIALKYKKKG

CRAMP1

186

Q96RY5
QRYLKKAQILNGKLD

DNAH7

716

Q8WXX0
VIFNYKGKNVLINKD

CALR

146

P27797
LQNEAQKRESFLKYK

IQUB

631

Q8NA54
QDVKKGKLRYVANLF

PPA1

71

Q15181
QVCEGKKKQTNYLRT

DYNC1H1

4436

Q14204
KKLLKYIRNVNFNGS

GRM7

446

Q14831
QRKIKKYRLQQAQKG

ICAM1

506

P05362
ENYKLRKKQELSNPS

EVC

821

P57679
FGTKKKLYRQNIVLN

FAM217A

466

Q8IXS0
ALQKNVAALQERYGK

GRIPAP1

146

Q4V328
KGIQNDLTKLSKYQA

CAVIN2

91

O95810
AYKTFANRVNNLKKK

RPRD2

291

Q5VT52
QKLSRGNYKVNQKSI

SCAF4

561

O95104
NSYVKNKTQGKIVDL

SERPINA6

171

P08185
KKDQNRAKNRYGNII

PTPRK

906

Q15262
SNNRKLYKKVVELAQ

RIN3

596

Q8TB24
INKYQGKLFAAKQDV

HGD

246

Q93099
LIKKKANLNALDRYG

POTEC

291

B2RU33
IAYAAKQNGLKSKEI

MINAR1

426

Q9UPX6
NNRFETGKKKLQYLS

FIBP

181

O43427
LIKKKANLNVLDRYG

POTED

291

Q86YR6
NQLREQVKYIAKLSG

PMFBP1

906

Q8TBY8
QIENYKKQTRNGLGK

FUT8

96

Q9BYC5
TGLKRIAKERQKQYN

UTP11

186

Q9Y3A2
INQTQKENLRKFYKG

RPL35

61

P42766
YLKLVNNADKQQAGR

TMCC3

96

Q9ULS5
KQEQLYLGLFNRLKK

SMARCAD1

746

Q9H4L7
VGQRRKYLNKALSEK

SYNE1

4441

Q8NF91
NYLKRKLQDAAEQLK

FNBP4

576

Q8N3X1
NSLQKLKYNQFKGLN

LRRTM3

71

Q86VH5
TQLAGFLAKQQNKYK

NBPF12

316

Q5TAG4
LDLIKYNDNRKNKFS

TAF2

776

Q6P1X5
KKKANLNALDRYGRT

POTEB

256

A0A0A6YYL3
NLNKNKITNYGIEKG

KERA

101

O60938
KKKANLNALDRYGRT

POTEJ

256

P0CG39
RLKGFSKYRAQLDNK

SIPA1L2

646

Q9P2F8
AAVDLGNKKAQLKIY

SH3TC1

1266

Q8TE82
LIKKKANLNALDRYG

POTEI

291

P0CG38
KNISSNYNKEAIKGR

SCN3A

1921

Q9NY46
YNQDLIRKGQANKVK

PLA2G6

671

O60733
LANIGRTNIYKNKKD

SLC26A3

511

P40879
NKKKELVNNLAEIYG

EHD3

326

Q9NZN3
SNGKNKYKNLLISDL

NOL4

326

O94818
TYNKNKIKGGANLLI

SCN1A

1941

P35498
DFVNAKKLNIKNRGL

SSRP1

416

Q08945
QGKRKKAIENAKQYQ

CFAP210

131

Q0VFZ6
AYGLSAEVKNKLAQK

CNN1

11

P51911
LILADYGKKNNVNVA

PRPF8

1986

Q6P2Q9
NLSRLKLAIKYNQKE

TRPC1

306

P48995
KQLNLIAQGKADYRQ

TOP3B

566

O95985
QEYIRQKNKGAKLKV

PDCD11

221

Q14690
QKNKGAKLKVGQYLN

PDCD11

226

Q14690
NLNELYQRAKKLSKA

TMX2

256

Q9Y320
LTAEQKAKALKGQYN

UCK1

71

Q9HA47
LGNTNKNKEYRQQKK

UNC13C

26

Q8NB66
GKIRKDLKYQAQDNF

SMU1

246

Q2TAY7
YLRKGKKINSNQLEN

SPANXN3

56

Q5MJ09
QIKNQFNKKLSGRLE

SRFBP1

376

Q8NEF9
FNKKLSGRLENTKQQ

SRFBP1

381

Q8NEF9
LFKQVYEQKSLKGRA

GTF2B

141

Q00403
ATNGNRKKYQRKGLT

KIF21A

896

Q7Z4S6
RNGVKLKKVQERQYN

SPIRE1

281

Q08AE8
AGYLNEKQRNKVKKI

SPARCL1

546

Q14515
YEKQKGRLNATLLKN

TRAV7

76

A0A075B6U4
INKNKITRIDQKALY

XRN1

641

Q8IZH2
KGKKFLQYNRLQLSR

PLCG1

996

P19174
IVNRKENKLKKAAGY

SLC4A5

856

Q9BY07
RKAKRKTNKGLAQYL

TCEAL2

136

Q9H3H9
LDRAQAAKNKGNKYF

TOMM70

111

O94826
ASLEKVKQYNQKLRA

PREX2

1436

Q70Z35
ILGQIYANNDKLSKR

MRPL28

86

Q13084
YKGKKFNARKETVQN

YJU2

51

Q9BW85
TENAQKRKSLYKQIG

PIGR

156

P01833
KNKQRNTGDIQKYLT

RNF168

216

Q8IYW5
LRKNKNIDNFLSRYK

ROCK1

46

Q13464
KNNLVKYDKKTGNFQ

SNRNP200

966

O75643
KIKSELGLNFYQQVK

ZNF277

331

Q9NRM2
QLQDRKVKYFNIKAS

TXNRD2

146

Q9NNW7
YTSLKGEKLKNAENN

ZGRF1

1331

Q86YA3
EAALQSAYVKNLKKG

TTC7A

241

Q9ULT0
AYQQALSRVKEAKQK

PLIN2

231

Q99541
KEAKQRLQQLFKGSQ

TOMM7

6

Q9P0U1
LKKKRYLQAASNNSR

ZNF148

471

Q9UQR1
QGAKLNIYKRKVEQA

VWA3B

911

Q502W6
KSLQTSYRKVKNGQA

ZSCAN29

466

Q8IWY8
GQELLARTQKKYFAK

SEC31A

606

O94979
VQKLKGSNLYSQLER

TBC1D19

16

Q8N5T2
LIKKKANLNALDRYG

POTEG

291

Q6S5H5
LIKKKANLNALDRYG

POTEM

291

A6NI47
AEKYKLELSKLRQNN

TEX9

306

Q8N6V9
LKVLEKQQGNFKATY

TTC9B

161

Q8N6N2
NKQANAGPYLERKKV

SCML4

101

Q8N228
SGSKKQKQYQRIRKE

TBL2

56

Q9Y4P3
EKIKKNQRQDYLNGA

UBE2Q1

231

Q7Z7E8
KKGKAQRQLYVASAI

SLC30A2

66

Q9BRI3
NINTILKEYKQSRGL

AK7

351

Q96M32
DIKKSFRNLVQLYKN

NAALADL2

176

Q58DX5
SKYLALNGKGLNVKQ

MYOT

461

Q9UBF9
LRKLKASLQGDVQKY

NDC80

296

O14777
AQTKAIKDQLQKYIR

NDE1

101

Q9NXR1
NAAKRRKQQYKDSLK

GRIN2B

1076

Q13224
KINQAQRSDIAYKAK

NEB

1006

P20929
QNTKQVSDILYKAKG

NEB

1251

P20929
LLQYQCDLKNSKGKI

NEB

6116

P20929