Cluster composition

Functions

CategoryNameIntersectionWithQueryPValueGenesInTermGenesInQueryGenesInTermInQueryID
GeneOntologyMolecularFunctionbiotin binding

ACACA ACACB HLCS

1.51e-0561843GO:0009374
GeneOntologyMolecularFunctioncarbamoyl-phosphate synthase (ammonia) activity

CAD CPS1

8.45e-0521842GO:0004087
GeneOntologyMolecularFunctioncarbamoyl-phosphate synthase (glutamine-hydrolyzing) activity

CAD CPS1

8.45e-0521842GO:0004088
GeneOntologyMolecularFunctionDNA (cytosine-5-)-methyltransferase activity, acting on CpN substrates

DNMT3A DNMT3B

8.45e-0521842GO:0051719
GeneOntologyMolecularFunctionacetyl-CoA carboxylase activity

ACACA ACACB

8.45e-0521842GO:0003989
GeneOntologyMolecularFunctionDNA (cytosine-5-)-methyltransferase activity

DNMT3A DNMT3B

5.01e-0441842GO:0003886
GeneOntologyBiologicalProcessfemale sex differentiation

ADAMTS1 AXL INSR GDF9 BRCA2 EIF2B2 PLA2G4A ATM STRA6 MERTK

1.23e-0615718010GO:0046660
DomainCPSASE_1

CAD ACACA ACACB CPS1

4.43e-0851834PS00866
DomainCPSASE_2

CAD ACACA ACACB CPS1

1.32e-0761834PS00867
DomainCbamoylP_synth_lsu-like_ATP-bd

CAD ACACA ACACB CPS1

3.05e-0771834IPR005479
DomainBC-like_N

CAD ACACA ACACB CPS1

3.05e-0771834IPR005481
DomainCPSase_L_D2

CAD ACACA ACACB CPS1

3.05e-0771834PF02786
DomainBiotin_carb_N

CAD ACACA ACACB CPS1

3.05e-0771834PF00289
Domain-

CAD ACACA ACACB CPS1

5.95e-061318343.40.50.20
DomainATP_GRASP

CAD ACACA ACACB CPS1

8.27e-06141834PS50975
DomainATP-grasp

CAD ACACA ACACB CPS1

8.27e-06141834IPR011761
DomainPreATP-grasp_dom

CAD ACACA ACACB CPS1

8.27e-06141834IPR016185
Domain-

CAD ACACA ACACB CPS1

1.12e-051518343.30.1490.20
DomainATP_grasp_subdomain_1

CAD ACACA ACACB CPS1

2.45e-05181834IPR013815
Domain-

CAD ACACA ACACB CPS1

2.45e-051818343.30.470.20
DomainCoatomer_g_Cpla

COPG1 COPG2

9.55e-0521832IPR032154
DomainACC_central

ACACA ACACB

9.55e-0521832PF08326
DomainCarbamoylP_synth_ssu

CAD CPS1

9.55e-0521832IPR006274
DomainCarbamoylP_synth_lsu

CAD CPS1

9.55e-0521832IPR006275
Domain-

COPG1 COPG2

9.55e-05218322.60.40.1480
DomainCPSase_sm_chain

CAD CPS1

9.55e-0521832SM01097
DomainCPSase_L_D3

CAD CPS1

9.55e-0521832SM01096
DomainCbamoylP_synth_lsu_CPSase_dom

CAD CPS1

9.55e-0521832IPR005483
DomainCarbamoylP_synth_lsu_oligo

CAD CPS1

9.55e-0521832IPR005480
DomainCOP-gamma_platf

COPG1 COPG2

9.55e-0521832PF08752
DomainCoatomer_g_Cpla

COPG1 COPG2

9.55e-0521832PF16381
DomainCoatomer_gsu_app_Ig-like-sub

COPG1 COPG2

9.55e-0521832IPR013040
DomainCPSase_sm_chain

CAD CPS1

9.55e-0521832PF00988
DomainAcCoA_COase_cen

ACACA ACACB

9.55e-0521832IPR013537
DomainCPSase_L_D3

CAD CPS1

9.55e-0521832PF02787
Domain-

CAD CPS1

9.55e-05218323.50.30.20
DomainCoatomer_gsu

COPG1 COPG2

9.55e-0521832IPR017106
Domain-

CAD CPS1

9.55e-05218321.10.1030.10
DomainCarbamoylP_synth_ssu_N

CAD CPS1

9.55e-0521832IPR002474
DomainJmjN

KDM5C KDM5D KDM4D

1.06e-04101833SM00545
DomainJmjN

KDM5C KDM5D KDM4D

1.06e-04101833PF02375
DomainJMJN

KDM5C KDM5D KDM4D

1.06e-04101833PS51183
DomainJmjN

KDM5C KDM5D KDM4D

1.06e-04101833IPR003349
DomainTPR_REGION

OGT LONRF1 ZFC3H1 TTC3 ST13 TTC7B ST13P5 CFAP46

2.26e-041651838PS50293
DomainTPR

OGT LONRF1 ZFC3H1 TTC3 ST13 TTC7B ST13P5 CFAP46

2.26e-041651838PS50005
DomainATP_grasp_subdomain_2

CAD ACACA ACACB CPS1

2.28e-04311834IPR013816
DomainMGS-like_dom

CAD CPS1

2.85e-0431832IPR011607
DomainMGS

CAD CPS1

2.85e-0431832PF02142
DomainMGS

CAD CPS1

2.85e-0431832SM00851
Domain-

CAD CPS1

2.85e-04318323.40.50.1380
Domain-

KDM5C KDM5D ARID2

3.86e-041518331.10.150.60
DomainBRIGHT

KDM5C KDM5D ARID2

3.86e-04151833SM00501
DomainARID_dom

KDM5C KDM5D ARID2

3.86e-04151833IPR001606
DomainARID

KDM5C KDM5D ARID2

3.86e-04151833PS51011
DomainARID

KDM5C KDM5D ARID2

3.86e-04151833PF01388
DomainTPR-like_helical_dom

OGT LONRF1 ZFC3H1 TRAPPC8 TTC3 ST13 TTC7B ST13P5 CFAP46

4.98e-042331839IPR011990
DomainARM-type_fold

COPG1 LRRK2 COPG2 RYR3 EFR3A ARID2 PDS5A ATM CFAP69 UNC79 HTT

5.32e-0433918311IPR016024
DomainLys_sp_deMease-like_dom

KDM5C KDM5D

5.66e-0441832IPR013637
DomainC5_MTASE_1

DNMT3A DNMT3B

5.66e-0441832PS00094
DomainC5_MTASE_2

DNMT3A DNMT3B

5.66e-0441832PS00095
DomainCarboxyl_trans

ACACA ACACB

5.66e-0441832PF01039
DomainSAM_MT_C5

DNMT3A DNMT3B

5.66e-0441832PS51679
DomainDNA_methylase

DNMT3A DNMT3B

5.66e-0441832PF00145
DomainCOA_CT_CTER

ACACA ACACB

5.66e-0441832PS50989
DomainCOA_CT_NTER

ACACA ACACB

5.66e-0441832PS50980
DomainClathrin_a/coatomer_app_sub_C

COPG1 COPG2

5.66e-0441832IPR015873
DomainADD

DNMT3A DNMT3B

5.66e-0441832IPR025766
DomainPLU-1

KDM5C KDM5D

5.66e-0441832PF08429
DomainC5_MeTfrase

DNMT3A DNMT3B

5.66e-0441832IPR001525
DomainCOA_CT_N

ACACA ACACB

5.66e-0441832IPR011762
DomainCOA_CT_C

ACACA ACACB

5.66e-0441832IPR011763
DomainC5_DNA_meth_AS

DNMT3A DNMT3B

5.66e-0441832IPR018117
DomainADD

DNMT3A DNMT3B

5.66e-0441832PS51533
Domain-

COPG1 COPG2

5.66e-04418323.30.310.30
DomainCarboxyl_trans

ACACA ACACB

5.66e-0441832IPR000022
DomainTPR-contain_dom

OGT LONRF1 ZFC3H1 TTC3 ST13 TTC7B ST13P5

7.01e-041501837IPR013026
DomainBiotin_BS

ACACA ACACB

9.36e-0451832IPR001882
DomainBiotin_COase_C

ACACA ACACB

9.36e-0451832IPR005482
DomainBC

ACACA ACACB

9.36e-0451832PS50979
Domainzf-C5HC2

KDM5C KDM5D

9.36e-0451832PF02928
DomainGATase

CAD CPS1

9.36e-0451832PF00117
DomainBiotin_carb_C

ACACA ACACB

9.36e-0451832SM00878
DomainBiotin_carb_C

ACACA ACACB

9.36e-0451832PF02785
DomainBiotin_carboxylation_dom

ACACA ACACB

9.36e-0451832IPR011764
DomainZnf_C5HC2

KDM5C KDM5D

9.36e-0451832IPR004198
DomainBIOTIN

ACACA ACACB

9.36e-0451832PS00188
DomainGATASE_TYPE_1

CAD CPS1

1.40e-0361832PS51273
DomainGAR

DST GAS2L2

1.40e-0361832PS51460
DomainRudment_hybrid_motif

ACACA ACACB

1.40e-0361832IPR011054
DomainGAS2

DST GAS2L2

1.40e-0361832PF02187
DomainGATASE

CAD CPS1

1.40e-0361832IPR017926
Domain-

DST GAS2L2

1.40e-03618323.30.920.20
DomainGAS_dom

DST GAS2L2

1.40e-0361832IPR003108
DomainGAS2

DST GAS2L2

1.40e-0361832SM00243
DomainJmjC

KDM5C KDM5D KDM4D

1.61e-03241833PF02373
DomainTPR

OGT LONRF1 TTC3 ST13 TTC7B ST13P5

1.71e-031291836SM00028
DomainTPR_1

OGT TTC3 ST13 TTC7B ST13P5

1.92e-03901835IPR001440
DomainTPR_1

OGT TTC3 ST13 TTC7B ST13P5

1.92e-03901835PF00515
Domain-

KLHL5 KLHL9 KLHL13

2.28e-032718332.130.10.80
DomainCoatomer/calthrin_app_sub_C

COPG1 COPG2

2.57e-0381832IPR009028
DomainPROTEIN_KINASE_TYR

AXL INSR RET TESK2 MERTK

2.66e-03971835PS00109
DomainTyr_kinase_AS

AXL INSR RET TESK2 MERTK

2.66e-03971835IPR008266
DomainBiotin_lipoyl

ACACA ACACB

3.29e-0391832PF00364
DomainJMJC

KDM5C KDM5D KDM4D

3.72e-03321833PS51184
DomainJmjC_dom

KDM5C KDM5D KDM4D

3.72e-03321833IPR003347
DomainJmjC

KDM5C KDM5D KDM4D

4.07e-03331833SM00558
Domain-

CAD CPS1

4.08e-031018323.40.50.880
PathwayWP_BIOTIN_METABOLISM_INCLUDING_IMDS

ACACA ACACB HLCS BTD

1.01e-0691364M40064
PathwayREACTOME_BIOTIN_TRANSPORT_AND_METABOLISM

ACACA ACACB HLCS BTD

2.60e-06111364M27086
PathwayREACTOME_BIOTIN_TRANSPORT_AND_METABOLISM

ACACA ACACB HLCS BTD

2.60e-06111364MM14764
PathwayREACTOME_DEFECTS_IN_BIOTIN_BTN_METABOLISM

ACACA HLCS BTD

4.75e-0581363M27248
PathwayKEGG_MEDICUS_REFERENCE_METHIONINE_DEGRADATION

MAT2B DNMT3A DNMT3B

1.00e-04101363M47939
PathwayREACTOME_RESOLUTION_OF_D_LOOP_STRUCTURES_THROUGH_SYNTHESIS_DEPENDENT_STRAND_ANNEALING_SDSA

RTEL1 RAD51AP1 BRCA2 ATM

1.22e-04271364M27586
PathwayWP_SPINA_BIFIDA

MAT2B DNMT3A DNMT3B

1.81e-04121363M48321
Pubmed

In-Depth In Vivo Crosslinking in Minutes by a Compact, Membrane-Permeable, and Alkynyl-Enrichable Crosslinker.

ROCK2 ACACB PCDHGB6 PCDHGB1 NELFCD PPRC1 ACO2 TRIM43 TKTL1 ZFC3H1 TTC3 CHRNA1 ERLEC1 TRIM43B SPATC1 RAD51AP1 MFNG DST ATAD3C C4orf51 MTTP ATM TOP1MT PLCH1 CFAP69 DYNC1I2 RPL10 CFAP46 PCNT DNMT3B

1.89e-1014421863035575683
Pubmed

Chr21 protein-protein interactions: enrichment in proteins involved in intellectual disability, autism, and late-onset Alzheimer's disease.

TRAF6 OGT ANK3 ADAMTS1 PPRC1 LONRF1 HLCS ZFC3H1 TTC3 ST13 RYR3 DST FBH1 TTC7B CELSR3 PTPRK CADPS ZNF92 DLEU7 TLN2 YY1AP1 ATM MERTK RSBN1L PCM1 PCNT

6.24e-0912851862635914814
Pubmed

Proximity-dependent biotin identification (BioID) reveals a dynamic LSD1-CoREST interactome during embryonic stem cell differentiation.

TSHZ3 OGT ACACA ACACB NELFCD ZGRF1 COPG2 ZNF217 YEATS2 DST BRCA2 PCM1 PCNT

4.63e-074181861334709266
Pubmed

Prediction of the coding sequences of mouse homologues of KIAA gene: IV. The complete nucleotide sequences of 500 mouse KIAA-homologous cDNAs identified by screening of terminal sequences of cDNA clones randomly sampled from size-fractionated libraries.

ROCK2 ADAMTS4 RTEL1 GNB1L KIAA0586 ZFC3H1 TRAPPC8 ATAD3C OSBPL3 ARID2 PDS5A PLCH1 FGD6 RIC1

4.93e-074931861415368895
Pubmed

FBXO22 promotes leukemogenesis by targeting BACH1 in MLL-rearranged acute myeloid leukemia.

GNL3L ACACA ACACB ANK3 KDM5C RGS12 RYR3 HP ARID2 RP1 ATM HERC1 RSBN1L RIC1

5.43e-074971861436774506
Pubmed

O-GlcNAc transferase promotes influenza A virus-induced cytokine storm by targeting interferon regulatory factor-5.

TRAF6 OGT OGA

6.00e-074186332494619
Pubmed

TRB3 links the E3 ubiquitin ligase COP1 to lipid metabolism.

ACACA ACACB COP1

1.49e-065186316794074
Pubmed

BioID-based intact cell interactome of the Kv1.3 potassium channel identifies a Kv1.3-STAT3-p53 cellular signaling pathway.

ROCK2 CAD CDC42BPA MAP7D3 ANK3 GNB1L ETFB HLCS COPG2 SLC30A1 EFR3A RBM25 DST PDS5A PLCH1 DHX29

1.51e-067081861639231216
Pubmed

Prediction of the coding sequences of unidentified human genes. XVI. The complete sequences of 150 new cDNA clones from brain which code for large proteins in vitro.

ADAMTS1 KLHL9 KLHL13 HACE1 SORCS2 FGD6 UNC79 RIC1

1.84e-06153186810718198
Pubmed

Transcription factor protein interactomes reveal genetic determinants in heart disease.

GNL3L OGT CDC42BPA ACACA MAP7D3 COP1 KDM5D CPS1 YEATS2 RPL10 DNMT3A DNMT3B

2.49e-064111861235182466
Pubmed

Dnmt1 is essential to maintain progenitors in the perinatal intestinal epithelium.

ATM MUC2 DNMT3A DNMT3B

3.59e-0620186426023099
Pubmed

Genome-wide CRISPR screens identify novel regulators of wild-type and mutant p53 stability.

CAD OGT ZGRF1 KDM5C ZNF217 ST13 YEATS2 BRCA2 NFATC3 ARID2 ZNF92 YY1AP1 PCM1 PCNT

3.86e-065881861438580884
Pubmed

Maternally expressed NLRP2 links the subcortical maternal complex (SCMC) to fertility, embryogenesis and epigenetic reprogramming.

PLAGL1 DNMT3A DNMT3B

8.26e-068186328317850
Pubmed

Hdac4 Interactions in Huntington's Disease Viewed Through the Prism of Multiomics.

TTC7B WASHC5 CADPS PA2G4 UBP1 EIF2B2 TLN2 DHX29 MRRF PCM1 RPL10 HTT

1.07e-054751861231040226
Pubmed

ZAR1 and ZAR2 are required for oocyte meiotic maturation by regulating the maternal transcriptome and mRNA translational activation.

ZSCAN5A POLR2J3 ZSCAN5C WEE2 PCNT

1.51e-0558186531598710
Pubmed

Genome-wide CRISPR screen identifies HNRNPL as a prostate cancer dependency regulating RNA splicing.

GNL3L OGT CDC42BPA ACACA ANK3 RTEL1 PCDHGB1 C11orf54 POLR2J3 INSR RTN4RL1 TTC3 YEATS2 KLHL9 GRTP1 ZFHX2 TATDN1 CFAP69 PCM1 RIC1 HTT PCNT

1.69e-0514891862228611215
Pubmed

Proteome-scale mapping of binding sites in the unstructured regions of the human proteome.

TSHZ3 ACACB ANK3 RET KDM5D ZNF804A ARID2 ATM RIC1 PCNT DNMT3B

2.24e-054301861135044719
Pubmed

The PWWP domain of Dnmt3a and Dnmt3b is required for directing DNA methylation to the major satellite repeats at pericentric heterochromatin.

DNMT3A DNMT3B

2.84e-052186215456878
Pubmed

Liver-specific deletion of de novo DNA methyltransferases protects against glucose intolerance in high-fat diet-fed male mice.

DNMT3A DNMT3B

2.84e-052186238795327
Pubmed

G2019S leucine-rich repeat kinase 2 causes uncoupling protein-mediated mitochondrial depolarization.

LRRK2 UCP2

2.84e-052186222736029
Pubmed

Inactivation of Dnmt3b in mouse embryonic fibroblasts results in DNA hypomethylation, chromosomal instability, and spontaneous immortalization.

DNMT3A DNMT3B

2.84e-052186215757890
Pubmed

Caspase recruitment domain family member 10 regulates carbamoyl phosphate synthase 1 and promotes cancer growth in bladder cancer cells.

CARD10 CPS1

2.84e-052186231565867
Pubmed

MicroRNA-29 family reverts aberrant methylation in lung cancer by targeting DNA methyltransferases 3A and 3B.

DNMT3A DNMT3B

2.84e-052186217890317
Pubmed

The TAM receptor tyrosine kinases Axl and Mer drive the maintenance of highly phagocytic macrophages.

AXL MERTK

2.84e-052186235967387
Pubmed

Kendrin/pericentrin-B, a centrosome protein with homology to pericentrin that complexes with PCM-1.

PCM1 PCNT

2.84e-052186211171385
Pubmed

Genetic inhibition of hepatic acetyl-CoA carboxylase activity increases liver fat and alters global protein acetylation.

ACACA ACACB

2.84e-052186224944901
Pubmed

Roles for Dnmt3b in mammalian development: a mouse model for the ICF syndrome.

DNMT3A DNMT3B

2.84e-052186216501171
Pubmed

Hormonal regulation of acetyl-CoA carboxylase isoenzyme gene transcription.

ACACA ACACB

2.84e-052186220139635
Pubmed

Molecular enzymology of the catalytic domains of the Dnmt3a and Dnmt3b DNA methyltransferases.

DNMT3A DNMT3B

2.84e-052186211919202
Pubmed

Acetyl-CoA carboxylase inhibition by ND-630 reduces hepatic steatosis, improves insulin sensitivity, and modulates dyslipidemia in rats.

ACACA ACACB

2.84e-052186226976583
Pubmed

Mutations of histone demethylase genes encoded by X and Y chromosomes, Kdm5c and Kdm5d, lead to noncompaction cardiomyopathy in mice.

KDM5C KDM5D

2.84e-052186232081420
Pubmed

The N-terminal domain of human holocarboxylase synthetase facilitates biotinylation via direct interaction with the substrate protein.

ACACB HLCS

2.84e-052186220085763
Pubmed

Paradoxical role of the proto-oncogene Axl and Mer receptor tyrosine kinases in colon cancer.

AXL MERTK

2.84e-052186223878224
Pubmed

Establishment and maintenance of genomic methylation patterns in mouse embryonic stem cells by Dnmt3a and Dnmt3b.

DNMT3A DNMT3B

2.84e-052186212897133
Pubmed

O-GlcNAc transferase and O-GlcNAcase: achieving target substrate specificity.

OGT OGA

2.84e-052186225173736
Pubmed

Comprehensive structure-function characterization of DNMT3B and DNMT3A reveals distinctive de novo DNA methylation mechanisms.

DNMT3A DNMT3B

2.84e-052186232620778
Pubmed

The subcellular localization of acetyl-CoA carboxylase 2.

ACACA ACACB

2.84e-052186210677481
Pubmed

Loss of O-GlcNAcase catalytic activity leads to defects in mouse embryogenesis.

OGT OGA

2.84e-052186233610549
Pubmed

DNA methyltransferases Dnmt3a and Dnmt3b are essential for de novo methylation and mammalian development.

DNMT3A DNMT3B

2.84e-052186210555141
Pubmed

DNA methyltransferase 3A promoter polymorphism is associated with the risk of human spontaneous abortion after assisted reproduction techniques and natural conception.

DNMT3A DNMT3B

2.84e-052186227817038
Pubmed

A mouse Y chromosome gene encoded by a region essential for spermatogenesis and expression of male-specific minor histocompatibility antigens.

KDM5C KDM5D

2.84e-05218627524912
Pubmed

Hidden Markov Modelling Reveals Neighborhood Dependence of Dnmt3a and 3b Activity.

DNMT3A DNMT3B

2.84e-052186231027045
Pubmed

A single amino acid substitution confers enhanced methylation activity of mammalian Dnmt3b on chromatin DNA.

DNMT3A DNMT3B

2.84e-052186220507910
Pubmed

De novo fatty acid synthesis controls the fate between regulatory T and T helper 17 cells.

ACACA ACACB

2.84e-052186225282359
Pubmed

Chromatin targeting of de novo DNA methyltransferases by the PWWP domain.

DNMT3A DNMT3B

2.84e-052186214998998
Pubmed

Acetyl-CoA carboxylase rewires cancer metabolism to allow cancer cells to survive inhibition of the Warburg effect by cetuximab.

ACACA ACACB

2.84e-052186227693630
Pubmed

Cryo-EM structure of human O-GlcNAcylation enzyme pair OGT-OGA complex.

OGT OGA

2.84e-052186237907462
Pubmed

SorCS2-mediated NR2A trafficking regulates motor deficits in Huntington's disease.

SORCS2 HTT

2.84e-052186228469074
Pubmed

Does uncoupling protein 2 expression qualify as marker of disease status in LRRK2-associated Parkinson's disease?

LRRK2 UCP2

2.84e-052186224251413
Pubmed

Dynamic expression of DNMT3a and DNMT3b isoforms during male germ cell development in the mouse.

DNMT3A DNMT3B

2.84e-052186216725135
Pubmed

Effects of PKB/Akt inhibitors on insulin-stimulated lipogenesis and phosphorylation state of lipogenic enzymes in white adipose tissue.

ACACA ACACB

2.84e-052186232215608
Pubmed

Structural basis for recognition of histone H3K36me3 nucleosome by human de novo DNA methyltransferases 3A and 3B.

DNMT3A DNMT3B

2.84e-052186226993463
Pubmed

DNA methylation density influences the stability of an epigenetic imprint and Dnmt3a/b-independent de novo methylation.

DNMT3A DNMT3B

2.84e-052186212370304
Pubmed

Activity and structure of human acetyl-CoA carboxylase targeted by a specific inhibitor.

ACACA ACACB

2.84e-052186229772612
Pubmed

Gene expression of O-GlcNAc cycling enzymes in human breast cancers.

OGT OGA

2.84e-052186221567137
Pubmed

Expression and potential role of microRNA-29b in mouse early embryo development.

DNMT3A DNMT3B

2.84e-052186225766529
Pubmed

Cloning and characterization of a family of novel mammalian DNA (cytosine-5) methyltransferases.

DNMT3A DNMT3B

2.84e-05218629662389
Pubmed

Deoxyribonucleic acid methyl transferases 3a and 3b associate with the nuclear orphan receptor COUP-TFI during gene activation.

DNMT3A DNMT3B

2.84e-052186217579209
Pubmed

Cloning and developmental expression analysis of the murine c-mer tyrosine kinase.

AXL MERTK

2.84e-05218627784083
Pubmed

O-Linked N-Acetylglucosamine (O-GlcNAc) Transferase and O-GlcNAcase Interact with Mi2β Protein at the Aγ-Globin Promoter.

OGT OGA

2.84e-052186227231347
Pubmed

Genome-wide DNA Methylation Signatures Are Determined by DNMT3A/B Sequence Preferences.

DNMT3A DNMT3B

2.84e-052186232543182
Pubmed

Association between pathogenic germline mutations in BRCA2 and ATM and tumor-infiltrating lymphocytes in primary prostate cancer.

BRCA2 ATM

2.84e-052186234533610
Pubmed

The human DNA methyltransferases DNMT3A and DNMT3B have two types of promoters with different CpG contents.

DNMT3A DNMT3B

2.84e-052186212359337
Pubmed

Benzo[a]pyrene diol epoxide suppresses retinoic acid receptor-beta2 expression by recruiting DNA (cytosine-5-)-methyltransferase 3A.

DNMT3A DNMT3B

2.84e-052186220426865
Pubmed

High expression of DNMT3A and DNMT3B regulatory factors of TGFB in non-neoplastic liver tissues of HCC.

DNMT3A DNMT3B

2.84e-052186237807334
Pubmed

Interleukin 17 regulates Mer tyrosine kinase-positive cells in Pseudomonas aeruginosa keratitis.

IL17RA MERTK

2.84e-052186225298414
Pubmed

Cloning, expression and chromosome locations of the human DNMT3 gene family.

DNMT3A DNMT3B

2.84e-052186210433969
Pubmed

Analysis of mutation rates in the SMCY/SMCX genes shows that mammalian evolution is male driven.

KDM5C KDM5D

2.84e-05218629060413
Pubmed

Association of increased genotypes risk for bipolar disorder with brain white matter integrity investigated with tract-based spatial statistics: Special Section on "Translational and Neuroscience Studies in Affective Disorders". Section Editor, Maria Nobile MD, PhD. This Section of JAD focuses on the relevance of translational and neuroscience studies in providing a better understanding of the neural basis of affective disorders. The main aim is to briefly summarise relevant research findings in clinical neuroscience with particular regards to specific innovative topics in mood and anxiety disorders.

ANK3 ZNF804A

2.84e-052186228648753
Pubmed

DNMT3A/3B overexpression might be correlated with poor patient survival, hypermethylation and low expression of ESR1/PGR in endometrioid carcinoma: an analysis of The Cancer Genome Atlas.

DNMT3A DNMT3B

2.84e-052186230614867
Pubmed

Differential regulation of lung homeostasis and silicosis by the TAM receptors MerTk and Axl.

AXL MERTK

2.84e-052186238774866
Pubmed

Blocking AMPK signalling to acetyl-CoA carboxylase increases cisplatin-induced acute kidney injury and suppresses the benefit of metformin.

ACACA ACACB

2.84e-052186236076520
Pubmed

Dnmt3a and Dnmt3b have overlapping and distinct functions in hematopoietic stem cells.

DNMT3A DNMT3B

2.84e-052186225130491
Pubmed

Assignment of cytosine-5 DNA methyltransferases Dnmt3a and Dnmt3b to mouse chromosome bands 12A2-A3 and 2H1 by in situ hybridization.

DNMT3A DNMT3B

2.84e-052186210575238
Pubmed

Inhibition of Acetyl-CoA Carboxylase by Phosphorylation or the Inhibitor ND-654 Suppresses Lipogenesis and Hepatocellular Carcinoma.

ACACA ACACB

2.84e-052186230244972
Pubmed

TAM kinase signaling is indispensable for proper skeletal muscle regeneration in mice.

AXL MERTK

2.84e-052186234120143
Pubmed

DNA methyltransferase 3a limits the expression of interleukin-13 in T helper 2 cells and allergic airway inflammation.

DNMT3A DNMT3B

2.84e-052186222190484
Pubmed

Distinct enzymatic properties of recombinant mouse DNA methyltransferases Dnmt3a and Dnmt3b.

DNMT3A DNMT3B

2.84e-052186212869530
Pubmed

Local chromatin microenvironment determines DNMT activity: from DNA methyltransferase to DNA demethylase or DNA dehydroxymethylase.

DNMT3A DNMT3B

2.84e-052186226098813
Pubmed

TAM receptors and the regulation of erythropoiesis in mice.

AXL MERTK

2.84e-052186219211638
Pubmed

Regulation of microglial phagocytosis and inflammatory gene expression by Gas6 acting on the Axl/Mer family of tyrosine kinases.

AXL MERTK

2.84e-052186218247125
Pubmed

Selective anchoring of DNA methyltransferases 3A and 3B to nucleosomes containing methylated DNA.

DNMT3A DNMT3B

2.84e-052186219620278
Pubmed

Increased Mer and Axl receptor tyrosine kinase expression on glomeruli in lupus nephritis.

AXL MERTK

2.84e-052186228127639
Pubmed

Dnmt3a deficiency in the skin causes focal, canonical DNA hypomethylation and a cellular proliferation phenotype.

DNMT3A DNMT3B

2.84e-052186233846253
Pubmed

DNA methylation and demethylation in mammals.

DNMT3A DNMT3B

2.84e-052186221454628
Pubmed

Profound flanking sequence preference of Dnmt3a and Dnmt3b mammalian DNA methyltransferases shape the human epigenome.

DNMT3A DNMT3B

2.84e-052186215854647
Pubmed

MERTK controls melanoma cell migration and survival and differentially regulates cell behavior relative to AXL.

AXL MERTK

2.84e-052186223617806
Pubmed

DNA G-quadruplexes show strong interaction with DNA methyltransferases in vitro.

DNMT3A DNMT3B

2.84e-052186227468168
Pubmed

Targeting ATM ameliorates mutant Huntingtin toxicity in cell and animal models of Huntington's disease.

ATM HTT

2.84e-052186225540325
Pubmed

Tumor necrosis factor receptor-associated factor 6 (TRAF6) associates with huntingtin protein and promotes its atypical ubiquitination to enhance aggregate formation.

TRAF6 HTT

2.84e-052186221454471
Pubmed

O-GlcNAcase is essential for embryonic development and maintenance of genomic stability.

OGT OGA

2.84e-052186222314054
Pubmed

Hijacking of the O-GlcNAcZYME complex by the HTLV-1 Tax oncoprotein facilitates viral transcription.

OGT OGA

2.84e-052186228742148
Pubmed

Mouse H-Y encoding Smcy gene and its X chromosomal homolog Smcx.

KDM5C KDM5D

2.84e-052186210441747
Pubmed

The influence of DNMT3A and DNMT3B gene polymorphisms on acute myeloid leukemia risk in a Moroccan population.

DNMT3A DNMT3B

2.84e-052186232912818
Pubmed

Inefficient purifying selection: the mammalian Y chromosome in the rodent genus Mus.

KDM5C KDM5D

2.84e-052186216416087
Pubmed

Opposing Roles of Tyrosine Kinase Receptors Mer and Axl Determine Clinical Outcomes in Experimental Immune-Mediated Nephritis.

AXL MERTK

2.84e-052186227527599
Pubmed

Methylation-independent repression of Dnmt3b contributes to oncogenic activity of Dnmt3a in mouse MYC-induced T-cell lymphomagenesis.

DNMT3A DNMT3B

2.84e-052186225639876
Pubmed

OGT and OGA expression in postmenopausal skeletal muscle associates with hormone replacement therapy and muscle cross-sectional area.

OGT OGA

2.84e-052186224365779
Pubmed

Inhibition of Acetyl-CoA Carboxylase 1 (ACC1) and 2 (ACC2) Reduces Proliferation and De Novo Lipogenesis of EGFRvIII Human Glioblastoma Cells.

ACACA ACACB

2.84e-052186228081256
Pubmed

Axl receptor induces efferocytosis, dampens M1 macrophage responses and promotes heart pathology in Trypanosoma cruzi infection.

AXL MERTK

2.84e-052186236581764
InteractionDUSP16 interactions

ROCK2 CAD SZT2 KDM5C TTC3 SMG8 BRCA2 PLCH1 PCM1 HTT PCNT

9.23e-0623717911int:DUSP16
InteractionKCNA3 interactions

ROCK2 CAD CDC42BPA MAP7D3 ANK3 SZT2 ABCA13 GNB1L ETFB LRRK2 HLCS COPG2 SLC30A1 EFR3A YEATS2 RBM25 DST PDS5A TLN2 RP1 PLCH1 DHX29

1.01e-0587117922int:KCNA3
GeneFamilyAT-rich interaction domain containing

KDM5C KDM5D ARID2

1.22e-04151203418
GeneFamilyReceptor Tyrosine Kinases|CD molecules

AXL INSR RET MERTK

1.40e-04401204321
GeneFamilyPHD finger proteins|Lysine demethylases

KDM5C KDM5D KDM4D

5.21e-04241203485
GeneFamilyTetratricopeptide repeat domain containing|Bardet-Biedl syndrome associated|BBSome

OGT TTC3 ST13 TTC7B CFAP46

1.02e-031151205769
GeneFamilyRing finger proteins

TRAF6 LONRF1 COP1 TRIM43 TTC3 ZNRF2 TRIM43B

2.41e-03275120758
GeneFamilyKelch like|BTB domain containing

KLHL5 KLHL9 KLHL13

2.71e-03421203617
ToppCelldroplet-Pancreas-PANCREAS-30m-Epithelial-pancreatic_B_cell|Pancreas / Large_Intestine_Pancreas_Liver - method, tissue, subtissue, age, lineage, cell ontology and free annotation

RET KDM5D TTC3 NEUROD1 DST CADPS HERC1 PCM1 DNMT3A

1.28e-0719518493e519cffa6144a62b06124642a14c9ff39b76554
ToppCelldroplet-Pancreas-PANCREAS-30m-Epithelial-pancreatic_B_cell|Pancreas / Large_Intestine_Pancreas_Liver - method, tissue, subtissue, age, lineage, cell ontology and free annotation

RET KDM5D TTC3 NEUROD1 DST CADPS HERC1 PCM1 DNMT3A

1.28e-0719518497796ea9247f4c63762f0de8490fed08b9717fa23
ToppCell10x5'-Liver-Lymphocytic_T_CD4-T_CD4/CD8|Liver / Manually curated celltypes from each tissue

OGT ANK3 POLR2J3 OSBPL3 ARID2 ATM HERC1 OGA

8.98e-071811848f2315414e714ac86211546a935660c4be6e85f1b
ToppCellChildren_(3_yrs)-Epithelial|Children_(3_yrs) / Lineage, Cell type, age group and donor

ACACA ANK3 LRRK2 PTPRK SORCS2 RP1 PLCH1 ACSS3

1.35e-061911848e432c6e1ae82dddf84314ce73d2b7a991630d905
ToppCellControl-Epithelial-Ciliated|World / Disease state, Lineage and Cell class

ABCA13 PRSS12 VWA3B RP1 PLCH1 CFAP69 ANKFN1 CFAP46

1.51e-061941848958e648138676d46698090b4046cb484083ae449
ToppCellIPF-Multiplet-Multiplet|IPF / Disease state, Lineage and Cell class

ANK3 PTPRK VWA3B RP1 PLCH1 CFAP69 ANKFN1 CFAP46

1.57e-061951848fce0c29574bb7aab181b9c00feb42681e285d1f2
ToppCellIPF-Multiplet-Multiplet|World / Disease state, Lineage and Cell class

ANK3 PTPRK VWA3B RP1 PLCH1 CFAP69 ANKFN1 CFAP46

1.57e-06195184821dbdc803c6947024dc2416e9e21c2ef0af9bc31
ToppCellIPF-Multiplet|IPF / Disease state, Lineage and Cell class

ANK3 PTPRK VWA3B RP1 PLCH1 CFAP69 ANKFN1 CFAP46

1.57e-061951848eacc0449ae6f3ad8002268cd061467684c6fb9a7
ToppCellIPF-Epithelial|IPF / Disease state, Lineage and Cell class

ANK3 PTPRK VWA3B RP1 PLCH1 CFAP69 ANKFN1 CFAP46

1.63e-06196184887d9881cfec461a5d89b688a83749b618c519485
ToppCellThalamus-Neuronal-Excitatory-eN2(Slc17a7_Slc17a6)-Slc17a6-Excitatory_Neuron.Slc17a6.Ebf1_(Anterior_pretectal_nucleus_(APT))-|Thalamus / BrainAtlas - Mouse McCarroll V32

TRPA1 PCDHGB1 TRIM43 WEE2 C4BPB

3.82e-06571845ef44602342511a9f90c93463628ad8b154cb26fb
ToppCellThalamus-Neuronal-Excitatory-eN2(Slc17a7_Slc17a6)-Slc17a6-Excitatory_Neuron.Slc17a6.Ebf1_(Anterior_pretectal_nucleus_(APT))|Thalamus / BrainAtlas - Mouse McCarroll V32

TRPA1 PCDHGB1 TRIM43 WEE2 C4BPB

3.82e-06571845a3dc14f7a63cc70b2789770644e0b9453426c6f9
ToppCell10x5'-Lung-Lymphocytic_T_CD4-T_CD4/CD8|Lung / Manually curated celltypes from each tissue

OGT ABCA13 CPS1 GAS2L2 PLCH1 ANKFN1 CFAP46

3.98e-06156184710d191e29b16cae8238e8df6c0ff38882253f34e
ToppCellHippocampus-Neuronal-Excitatory-eN2(Slc17a7_Slc17a6)|Hippocampus / BrainAtlas - Mouse McCarroll V32

TSHZ3 MAT2B PRSS12 GRB7 GABRQ IGSF21 RPL10

4.90e-06161184766554f59eaea4ba55a6c6724f9368e24e99c91e9
ToppCellfrontal_cortex-Neuronal-GABAergic_neuron-Sst-Sst_Rxfp1_Prdm8|frontal_cortex / Per Region, Lineage, Cell class, Cell type, Cell subtype

GALNTL6 TRPA1 CPS1 KLHL13 PLA2G4A PLCH1

1.12e-0512118462ae870f822488799cd0ad85e7f72af64e33a867f
ToppCellChildren_(3_yrs)-Epithelial-alveolar_epithelial_cell_type_2-D046|Children_(3_yrs) / Lineage, Cell type, age group and donor

ACACA ANK3 LRRK2 PTPRK SORCS2 PLCH1 ACSS3

1.13e-0518318476847c1252d6bb105524f812658112517fd351eab
ToppCellfacs-Thymus-Thymus_Epithelium-18m-Lymphocytic-thymocyte|Thymus / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation

GALNTL6 ABCA13 CPS1 RYR3 TLN2 PLCH1 UNC79

1.17e-0518418472cbed6462fea2622871bb7e49b0df3d984239281
ToppCellfacs-Large_Intestine-Distal-3m-Epithelial-enteroendocrine_cell|Large_Intestine / Large_Intestine_Pancreas_Liver - method, tissue, subtissue, age, lineage, cell ontology and free annotation

ADAMTS1 PRSS12 NEUROD1 CADPS DLEU7 STRA6 IGSF21

1.17e-0518418473da93e7d8b62463e307cc0425c47dbd3bef66799
ToppCellfacs-Thymus-Thymus_Epithelium-18m-Lymphocytic|Thymus / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation

GALNTL6 ABCA13 CPS1 RYR3 TLN2 PLCH1 UNC79

1.17e-051841847ea7a7e2bac46d4d2c31a5d576b38a032b5335062
ToppCellfacs-Thymus-Thymus_Epithelium-18m-Lymphocytic-proliferating_thymocyte;_DN_to_DP_transition,_dividing_(some_are_Cd8+/_Cd4+,_some_undergoing_VDJ_recombination)|Thymus / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation

GALNTL6 ABCA13 CPS1 RYR3 TLN2 PLCH1 UNC79

1.17e-0518418472b19a8c5f823e00812908b23e66bb4e563278aff
ToppCellnucseq-Immune-Lymphocytic_B-Lymphocytic_B-Plasma|nucseq / Celltype signatures by Technology, Lineage, Lineage_subclass, Celltype_group, Cell_type2

OGT INSR FBH1 BTD OSBPL3 ATM RIC1

1.21e-0518518473b77bc49cd3740acc025e162a36282ac09e12198
ToppCellCOPD-Epithelial-Ciliated|COPD / Disease state, Lineage and Cell class

ABCA13 VWA3B RP1 PLCH1 CFAP69 ANKFN1 CFAP46

1.30e-051871847f0fd0792f6926f705d175f6e6fd480f12c7a3bd4
ToppCellAdult-Epithelial-ciliated_cell-D231|Adult / Lineage, Cell type, age group and donor

ABCA13 PRSS12 VWA3B RP1 CFAP69 ANKFN1 CFAP46

1.35e-05188184734b11f72ca73153d02edcd09b38983ad1a504659
ToppCellControl-Epithelial-Ciliated|Control / Disease state, Lineage and Cell class

ABCA13 PRSS12 VWA3B RP1 CFAP69 ANKFN1 CFAP46

1.39e-051891847c007fccd08728db3ea99af9da91d67b9b16dabb3
ToppCellBAL-Mild-Epithelial-Epithelial-Ciliated-|Mild / Location, Disease Group, Cell group, Cell class and sub_cluster (2021.03.09)

ABCA13 PRSS12 VWA3B RP1 PLCH1 CFAP69 CFAP46

1.49e-0519118472a8e6d560907e71e9f6e190ca0667da804e25641
ToppCellBAL-Mild-Epithelial-Epithelial-Ciliated-|Mild / Location, Disease Group, Cell group, Cell class and sub_cluster (2021.03.01)

ABCA13 PRSS12 VWA3B RP1 PLCH1 CFAP69 CFAP46

1.49e-05191184746c9d4d10c66c0fae1fa351924091b69ea2f38d4
ToppCellChildren_(3_yrs)-Epithelial-alveolar_epithelial_cell_type_2|Children_(3_yrs) / Lineage, Cell type, age group and donor

ACACA ANK3 LRRK2 PTPRK SORCS2 PLCH1 ACSS3

1.49e-051911847a0332a4ef629510fb313ec119195c44a3f704a80
ToppCellMild_COVID-19-Epithelial-Ciliated|Mild_COVID-19 / Disease group,lineage and cell class (2021.01.30)

ABCA13 PRSS12 VWA3B RP1 PLCH1 CFAP69 CFAP46

1.49e-051911847995e76bbf07674d95b8ef09e078cf6410af27a09
ToppCellBAL-Mild-Epithelial-Epithelial-Ciliated|Mild / Location, Disease Group, Cell group, Cell class and sub_cluster (2021.03.01)

ABCA13 PRSS12 VWA3B RP1 PLCH1 CFAP69 CFAP46

1.49e-051911847a37f20172b85566b9039254a89680e37fd503fd5
ToppCellBAL-Mild-Epithelial-Epithelial-Ciliated|Mild / Location, Disease Group, Cell group, Cell class (2021.03.09)

ABCA13 PRSS12 VWA3B RP1 PLCH1 CFAP69 CFAP46

1.49e-0519118472d36e08c5629cf73b6dd02cd173cafb52e8a3a7d
ToppCellnucseq-Epithelial-Epithelial_Airway-Ciliated/Deuterosomal-Ciliated|nucseq / Celltype signatures by Technology, Lineage, Lineage_subclass, Celltype_group, Cell_type2

ABCA13 PRSS12 VWA3B RP1 CFAP69 ANKFN1 CFAP46

1.49e-051911847e417bf491f8b8d7838a61f7f4f6b1740ba97aa3f
ToppCellnucseq-Epithelial-Epithelial_Airway-Ciliated/Deuterosomal|nucseq / Celltype signatures by Technology, Lineage, Lineage_subclass, Celltype_group, Cell_type2

ABCA13 PRSS12 VWA3B RP1 CFAP69 ANKFN1 CFAP46

1.49e-0519118479d31c8424d35bdc0c27188b68bfd0f731af3600b
ToppCellnucseq-Epithelial-Epithelial_Airway|nucseq / Celltype signatures by Technology, Lineage, Lineage_subclass, Celltype_group, Cell_type2

ABCA13 PRSS12 VWA3B RP1 CFAP69 ANKFN1 CFAP46

1.49e-0519118471c528f72c9ef3ef3a850b05e4a9715190832270c
ToppCellhuman_hepatoblastoma-Tumor_cells|World / Sample and Cell Type and Tumor Cluster (all cells)

ROCK2 ZFC3H1 PTPRK ARID2 PLAGL1 PCM1 ACSS3

1.54e-051921847916fbec1c7ab7969bda711886ac88e877e30c280
ToppCellEpithelial-alveolar_epithelial_cell_type_2|World / Lineage, Cell type, age group and donor

ACACA ANK3 LRRK2 PTPRK SORCS2 PLCH1 ACSS3

1.54e-05192184758c3737be7acce39fd2b91d70d6d7b2bbaa4f710
ToppCell10x5'-lymph-node_spleen-Lymphocytic_T_CD4-T_CD4/CD8|lymph-node_spleen / Manually curated celltypes from each tissue

OGT ANK3 POLR2J3 RBM25 ATM HERC1 PCM1

1.54e-05192184747646d7e4990be85072987f92bf18d52f8da752e
ToppCellIPF-Epithelial-Ciliated|World / Disease state, Lineage and Cell class

PRSS12 VWA3B RP1 PLCH1 CFAP69 ANKFN1 CFAP46

1.54e-051921847d903bbd6c18e29e2c4cdedeb3fea1fd5ad7baa11
ToppCellCOPD-Epithelial-Ciliated|World / Disease state, Lineage and Cell class

ABCA13 VWA3B RP1 PLCH1 CFAP69 ANKFN1 CFAP46

1.54e-051921847eab1105cd1a98cfcd3d74dc5c9b89e1799bba59e
ToppCellNS-moderate-d_0-4|moderate / Location, Severity, dps_group, Lineage and Cell class of Upper airway (combined)

ANK3 ABCA13 IGSF10 VWA3B RP1 CFAP69 CFAP46

1.60e-051931847ea345d34440b25f65358a53dc72831998d1c3620
ToppCellAdult-Epithelial-alveolar_epithelial_cell_type_2|Adult / Lineage, Cell type, age group and donor

ACACA ANK3 LRRK2 PTPRK SORCS2 PLCH1 ACSS3

1.60e-051931847738f4f0a9ddde2432b429ab46838e353b1790589
ToppCell10x_3'_v2v3-Non-neoplastic-Myeloid-DC-cDC2-F|10x_3'_v2v3 / Platform, Oncotype, Lineage, Cell_class, celltype (level4), mutation group

AXL INSR RGS2 SPATC1 PLAGL1 TOP1MT RPL10

1.71e-051951847cb27f6ca8b02438c353c9dff2f76d2656bb5b29a
ToppCellBronchial-NucSeq-Epithelial-Epi_airway_secretory-Secretory_Club|NucSeq / Cell types per location group and 10X technology with lineage, and cell group designations

ACACA ANK3 PRSS12 LRRK2 PTPRK SORCS2 RP1

1.76e-051961847ed76eeb37400ca154feae9b7ebaddb6c434f8b81
ToppCellCOPD-Multiplet-Multiplet|COPD / Disease state, Lineage and Cell class

ANK3 ABCA13 PTPRK RP1 PLCH1 CFAP69 CFAP46

1.76e-051961847af4cdc61830685a888a1209826c23bcf54a43084
ToppCellCaecum-T_cell-Tfh|T_cell / Region, Cell class and subclass

GNL3L COPG1 KIF16B CPS1 TTC7B ATM FGD6

1.76e-051961847fe2ee5788028e6b671674f0cc50e2b6379f50976
ToppCellCOPD-Multiplet|COPD / Disease state, Lineage and Cell class

ANK3 ABCA13 PTPRK RP1 PLCH1 CFAP69 CFAP46

1.76e-0519618476d02d494196e3f857d53eea46d9419690d43beca
ToppCellsevere-low-quality_cells|World / Cohort 1 (10x PBMC) with disease condition, cell group and cell class

OGT ANK3 ZFC3H1 RBM25 ATM HERC1 PCM1

1.82e-05197184757ebd552f10d6278623b52a3d484d4b91ae1d028
ToppCell3'-Parenchyma_lung-Epithelial-Airway_ciliated-ciliated_columnar_cell_of_tracheobronchial_tree-Multiciliated_(non-nasal)-Multiciliated_(non-nasal)_L.0.3.2.2|3' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5

PRSS12 OSBPL3 ZFHX2 VWA3B RP1 CFAP69 CFAP46

1.82e-05197184774a2c6cb8fcfe53dd9a2b36492a16c58f38e51c9
ToppCellParenchymal-NucSeq-Epithelial-Epi_alveolar-AT2|NucSeq / Cell types per location group and 10X technology with lineage, and cell group designations

ACACA ANK3 LRRK2 PTPRK SORCS2 PLCH1 ACSS3

1.88e-0519818472e2a4e1756bba6f4fbe529559a97d2993c890b4b
ToppCellAnterior_Cingulate_gyrus_(CgG)-Neuronal|Anterior_Cingulate_gyrus_(CgG) / Sample groups (6 Anatomical region groups), with 5 level hierarchy of cell types

ANK3 COPG2 TTC3 CADPS HERC1 UNC79 DYNC1I2

1.88e-0519818470ff30edfd3c133a42e8cb96e1631a1143215f808
ToppCellmild-low-quality_cells|World / Cohort 1 (10x PBMC) with disease condition, cell group and cell class

OGT ANK3 ZFC3H1 RBM25 ATM HERC1 PCM1

1.94e-051991847f0b0097df0026496470a80d8cc9375ffd8389b00
ToppCellMild/Remission-B_intermediate-0|Mild/Remission / disease group and sub_cluster of B and Plasma cells(res = 0.5)

ANK3 POLR2J3 LRRK2 ZNF804A RGS2 TOP1MT RPL10

1.94e-051991847592111591f0f6816fc56620cb555eb48dabf0758
ToppCellNeuronal-Excitatory-eC(RORB)-eC_1-TWIST2-|Neuronal / cells hierarchy compared to all cells using T-Statistic

TRPA1 PRSS12 GRB7 PTPRK TESK2 MERTK PLCH1

2.01e-052001847af5d4a3d735f38c6e07b5d7bd2965b0486632c4e
ToppCellNeuronal-Excitatory-eC(RORB)-eC_1-TWIST2|Neuronal / cells hierarchy compared to all cells using T-Statistic

TRPA1 PRSS12 GRB7 PTPRK TESK2 MERTK PLCH1

2.01e-052001847bbfbefd24cc070b010e787e08ff6bff4a7ee3f7c
ToppCellBrain_organoid-organoid_Tanaka_cellReport-3m-Neuronal-Intermediate|3m / Sample Type, Dataset, Time_group, and Cell type.

COPG1 POLR2J3 ETFB ERLEC1 EIF2B2 ZNF90 RSBN1L

2.01e-052001847cbd0b9188a94778ffa539912aeb2a4378f0ab88f
ToppCellNeuronal-Excitatory-eC(RORB)-eC_1-TWIST2--L3-5|Neuronal / cells hierarchy compared to all cells using T-Statistic

TRPA1 PRSS12 GRB7 PTPRK TESK2 MERTK PLCH1

2.01e-052001847b9ef0e11c8e22f2c9c926fd48fa2005ef8d22752
ToppCellrenal_cortex_nuclei-Renal_AKI_(acute_kidney_injury)-Epithelial-Intermediate_tubule_epithelial_cell-kidney_loop_of_Henle_thin_descending_limb_epithelial_cell-Descending_Thin_Limb_Cell_Type_3|Renal_AKI_(acute_kidney_injury) / Celltypes from Cells and Nuclei per compartment and clinical group

ABCA13 LRRK2 GAS2L2 PLA2G4A VWA3B RP1

2.78e-0514218466469cf82552b39f63e20b841c9eed50de6f58d54
ToppCellCOVID-19_Mild|World / 5 Neutrophil clusters in COVID-19 patients

ANK3 LRRK2 COP1 OSBPL3 DDX60L OGA

4.08e-0515218462ff0980dfd8d430cca14649151d856edef115720
ToppCellfacs-GAT-Fat-24m|GAT / Fat_BAT_GAT_MAT_SCAT - method, tissue, subtissue, age, lineage, cell ontology and free annotation

LYPD4 GABRQ COL6A5 AKAP4 HP IGSF21

4.88e-051571846c4a0b6c95d353691fd2846002ce4bc7c2b0edd1c
ToppCellPND07-Mesenchymal-Mesenchymal_structural-Fibroblastic-AF2-AF2_prolif|PND07 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif

ZWILCH TSHZ3 ADAMTS4 RTEL1 GNB1L RAD51AP1

5.24e-0515918467ed659163f45e0c4df4782997c0786900c8186c8
ToppCellfacs-Lung-24m-Hematologic-lymphocytic-mature_NK_T_cell-mature_NK_T_cell_l22|24m / method, tissue, age, lineage, sublineage, cell ontologies, cell type and subtype

IPPK ANK3 FOLR1 RYR3 TRIM43B TLN2

6.65e-051661846bcdaab49bde5beba750b76fdcc3781a3c12c4fff
ToppCellfacs-Lung-24m-Hematologic-lymphocytic-mature_NK_T_cell|24m / method, tissue, age, lineage, sublineage, cell ontologies, cell type and subtype

IPPK ANK3 FOLR1 RYR3 TRIM43B TLN2

6.65e-0516618465e3b998d740b24f790fad37350d704ca0ea10b77
ToppCellprimary_visual_cortex-Neuronal-glutamatergic_neuron-L6_IT-L6_IT_VISp_Col23a1_Adamts2|primary_visual_cortex / Per Region, Lineage, Cell class, Cell type, Cell subtype

PRSS12 RTN4RL1 RYR3 PTPRK IGSF21 RPL10

7.11e-0516818463fe432267656aff81b6d92c18d1b6fc0cde73d6a
ToppCellPND07-Immune-Immune_Myeloid-Monocytic-Macrophage-AM-AM_G2M|PND07 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif

MAP7D3 AXL LONRF1 RAD51AP1 CELSR3 MERTK

7.84e-051711846845f312f8cbe29d820da25f0e6d75deb382bbfd8
ToppCelldroplet-Lung-immune-endo-depleted-3m-Lymphocytic-Proliferating_NK|Lung / Lung_Trachea - method, tissue, subtissue, age, lineage, cell ontology and free annotation

ZWILCH RAD51AP1 OSBPL3 ATM PLCH1 ALPK2

7.84e-0517118461eebd7138c3b20ddc1104f21615f9df0e776bbe6
ToppCellSomatosensory_Cortex_(S1)-Neuronal-Glutamatergic_Excit-Glut_C-D_(RORB)-Glut_D_(IT_RORB_THEMIS_LINC00507)_2-Exc_L3-4_RORB_PRSS12|Somatosensory_Cortex_(S1) / Sample groups (6 Anatomical region groups), with 5 level hierarchy of cell types

PRSS12 LRRK2 RYR3 PTPRK C12orf42 PLCH1

8.63e-051741846ae363ce736fc8af439f3ad594d7bc2e344db80d4
ToppCellprimary_visual_cortex-Neuronal-glutamatergic_neuron-L6_IT|primary_visual_cortex / Per Region, Lineage, Cell class, Cell type, Cell subtype

PRSS12 RTN4RL1 PTPRK IL17RA IGSF21 RPL10

8.90e-051751846c227fc5d1ccb69b82a96a6354913cafaf27d0eec
ToppCelldroplet-Heart-HEART_(LV+RV_ONLY)-30m-Endothelial-leukocyte|Heart / Tongue_Heart_Limb_Muscle_Aorta_Diaphragm - method, tissue, subtissue, age, lineage, cell ontology and free annotation

ANK3 GRB7 RYR3 C12orf42 STRA6 RPL10

8.90e-051751846f6e1d7297a4dbb38e1ab4f738d91f0e62abaee69
ToppCellPND07-Epithelial-Epithelial_Airway-Neurosecretory|PND07 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif

GABRQ RET ZNF804A HP CADPS WEE2

8.90e-05175184619eda8b5d39dc93d79737ebdbeeba5ec0cb23c51
ToppCell3'_v3-blood-Mast-Mast_cells|blood / Manually curated celltypes from each tissue

CDC42BPA RYR3 IGSF10 PLAGL1 RIC1 DNMT3B

9.19e-051761846b9da3deaf62622d47eb30b6be7548253eee95597
ToppCelldroplet-Heart-4Chambers-21m-Mesenchymal-nan|Heart / Tongue_Heart_Limb_Muscle_Aorta_Diaphragm - method, tissue, subtissue, age, lineage, cell ontology and free annotation

ADAMTS4 RTN4RL1 TLR6 CFAP69 UNC79 RSBN1L

1.01e-041791846b44e2d53b82c3c141bfc6539054b19708200a0d9
ToppCell5'-Airway_Nasal-Epithelial-Airway_ciliated-multi-ciliated_epithelial_cell-Multiciliated_(nasal)-Multiciliated_(nasal)_L.0.3.1.1|5' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5

ABCA13 VWA3B RP1 CFAP69 PCM1 CFAP46

1.04e-0418018461f1af4474f3f0ac3c0d6b1a6c875c354d36d8eec
ToppCellControl-Epithelial_cells-AT2|Control / group, cell type (main and fine annotations)

ACACA ANK3 LRRK2 PTPRK PLCH1 ACSS3

1.04e-041801846198b19e7910b4a8cc7e820c525ab357c7f99f578
ToppCell5'-Airway_Nasal-Immune_Myeloid-Myeloid_macrophage-lung_macrophage|5' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5

ADAMTS4 OXCT2 TLR6 YEATS2 IGSF21 FGD6

1.10e-0418218464a85429d365c4b2d73fc921f261b4b7635ac40bd
ToppCell5'-Airway_Nasal-Immune_Myeloid-Myeloid_macrophage-lung_macrophage-Interstitial_macrophage_perivascular|5' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5

ADAMTS4 OXCT2 TLR6 YEATS2 IGSF21 FGD6

1.10e-04182184653213af34af3337f5edc734d3b7b79e4349eac0d
ToppCell5'-Airway_Nasal-Immune_Myeloid-Myeloid_macrophage-lung_macrophage-Interstitial_macrophage_perivascular-Interstitial_macrophage_perivascular_L.1.2.1.1|5' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5

ADAMTS4 OXCT2 TLR6 YEATS2 IGSF21 FGD6

1.10e-0418218467909089ed6325c44edd6f9b7e8b1d542398222ea
ToppCellrenal_medulla_nuclei-CKD+DKD_normotensive-Epithelial-Distal_tubule_epithelial_cell-kidney_loop_of_Henle_thick_ascending_limb_epithelial_cell-Medullary_Thick_Ascending_Limb_Cell|CKD+DKD_normotensive / Celltypes from Cells and Nuclei per compartment and clinical group

ACACB SPATC1 OSBPL3 SORCS2 RP1 DNMT3A

1.10e-041821846041bc819e6cf2618bf86bce8dfe2df673f392ba3
ToppCellsystemic_lupus_erythematosus-flare-Lymphocytic_T-T8_naive-male|systemic_lupus_erythematosus / PBMC cell types (v2) per disease, treatment status, and sex

KDM5D PA2G4 ATM STRA6 PCM1 RPL10

1.10e-0418218463a3ed195c15d33d46a2f395cb93018e4bba28353
ToppCellPBMC_fresh-frozen-Severe-critical_progression_d12-22_with-steroid-Lymphocytic-Lymphocytic_T-CD8-positive,_alpha-beta_T_cell-T_CD8_c12-MKI67-TYROBP|Severe-critical_progression_d12-22_with-steroid / Compartment, severity and other cell annotations on 10x 3' data (130k)

PRSS12 ZGRF1 GNB1L OXCT2 TKTL1 RAD51AP1

1.14e-04183184654782c2e23bbeca5b683aa931393b1118da4aa37
ToppCellrenal_cortex_nuclei-Renal_AKI_(acute_kidney_injury)-Epithelial-Distal_tubule_epithelial_cell-kidney_loop_of_Henle_thick_ascending_limb_epithelial_cell-Macula_Densa_Cell|Renal_AKI_(acute_kidney_injury) / Celltypes from Cells and Nuclei per compartment and clinical group

LRRK2 KIF16B CPS1 KLHL13 PLA2G4A RP1

1.17e-0418418468fd8bd3d28d0ee6f0ef1f14e354d8eaf63a8081b
ToppCellPrimary_Visual_cortex_(V1C)-Neuronal-Glutamatergic_Excit-Glut_C-D_(RORB)-Glut_C_(IT_L4_RORB)-Exc_L4_RORB_CACNG5|Primary_Visual_cortex_(V1C) / Sample groups (6 Anatomical region groups), with 5 level hierarchy of cell types

LRRK2 RET RYR3 PLAGL1 MERTK PLCH1

1.17e-041841846658f2e522055e88c92bc482a845c40f8f5f1a8e3
ToppCellChildren_(3_yrs)-Epithelial-alveolar_epithelial_cell_type_2/Club-like_(AT2/Club-like)|Children_(3_yrs) / Lineage, Cell type, age group and donor

ACACA ANK3 LRRK2 PTPRK SORCS2 RP1

1.21e-04185184698b8ee42b89d97e4c9db01740e0c193503c68f2c
ToppCellCiliated_cells-B-IPF_02|World / lung cells shred on cell class, cell subclass, sample id

ABCA13 GAS2L2 VWA3B RP1 CFAP69 CFAP46

1.21e-0418518464fc7113d3dadc716ec5a8e62b58543cc00ce5b16
ToppCellCOVID-19-Epithelial_cells-Airway_club|COVID-19 / group, cell type (main and fine annotations)

ACACA ANK3 PRSS12 PTPRK RP1 PLCH1

1.21e-041851846cfe6fd73d817e173fe803bc1683c291d9bcb8608
ToppCellNS-moderate-d_16-33-Epithelial-Ciliated|d_16-33 / Location, Severity, dps_group, Lineage and Cell class of Upper airway (combined)

GAS2L2 VWA3B RP1 CFAP69 ANKFN1 CFAP46

1.21e-0418518465e689c2fb36ce3ac2adc8d15f67107f21cf68868
ToppCellMid-temporal_gyrus_(MTG)-Neuronal-Inh_GABAergic-i_Gaba_2-GABA_VIP_2-Inh_L1-3_VIP_ZNF322P1|Mid-temporal_gyrus_(MTG) / Sample groups (6 Anatomical region groups), with 5 level hierarchy of cell types

GALNTL6 ADAMTS1 ZNF804A RGS12 RYR3 KLHL13

1.21e-0418518460b5a0df58ae2ad8261f40f152775747af4f3937a
ToppCellSomatosensory_Cortex_(S1)-Neuronal-Glutamatergic_Excit-Glut_C-D_(RORB)-Glut_C_(IT_L4_RORB)-Exc_L4_RORB_CCDC168|Somatosensory_Cortex_(S1) / Sample groups (6 Anatomical region groups), with 5 level hierarchy of cell types

LRRK2 RET PLAGL1 MERTK PLCH1 FGD6

1.21e-0418518465a0340c25196453f19e424d346efbf66d2c53ac3
ToppCellEpithelial-alveolar_epithelial_cell_type_2/Club-like_(AT2/Club-like)|World / Lineage, Cell type, age group and donor

ACACA ANK3 LRRK2 PTPRK SORCS2 RP1

1.28e-04187184681cc8435b2704a9a8287b3f54acaae0f11dd4ac7
ToppCellSmart-seq2-bone_marrow_(Smart-seq2)|Smart-seq2 / Per Platform+tissue_group, by lineage_subgroup, cell_group, cell_type

CDC42BPA INSR KDM5D ERLEC1 ELANE DNMT3B

1.32e-041881846557a0ac069a6ff4e687cac032f64170b9b247165
ToppCellAdult-Epithelial-alveolar_epithelial_cell_type_2-D175|Adult / Lineage, Cell type, age group and donor

ACACA ANK3 ABCA13 LRRK2 HP PLCH1

1.32e-041881846ec38def1fdbb34ed9b30244806975bd5a4370164
ToppCellfacs-Pancreas-Endocrine-24m-Epithelial-pancreatic_B_cell|Pancreas / Large_Intestine_Pancreas_Liver - method, tissue, subtissue, age, lineage, cell ontology and free annotation

TTC3 NEUROD1 DST CADPS ZFHX2 DNMT3A

1.32e-041881846a91443aa8fa8fa87f7501c59219daa0305bd0bbf
ToppCellAdult-Epithelial-alveolar_epithelial_cell_type_2-D231|Adult / Lineage, Cell type, age group and donor

ANK3 LRRK2 PTPRK SORCS2 PLCH1 ACSS3

1.36e-041891846dab54a52358f66a8a9460cd6089a06c5fa7e7a5d
ToppCellCOVID-19-lung-Ciliated|COVID-19 / Disease (COVID-19 only), tissue and cell type

ABCA13 PRSS12 VWA3B RP1 ANKFN1 CFAP46

1.36e-041891846a2da5debd10f27b1280b40141ef0bfef007cc72c
ToppCellChildren_(3_yrs)-Epithelial-ciliated_cell-D032|Children_(3_yrs) / Lineage, Cell type, age group and donor

ABCA13 PRSS12 VWA3B CFAP69 ANKFN1 CFAP46

1.36e-04189184668a3cf7763d6f9b95d6d6524eff7a16042703f1d
ToppCellrenal_cortex_nuclei-Adult_normal_reference-Epithelial-Distal_tubule_epithelial_cell-kidney_loop_of_Henle_thick_ascending_limb_epithelial_cell-Macula_Densa_Cell|Adult_normal_reference / Celltypes from Cells and Nuclei per compartment and clinical group

LRRK2 KIF16B RYR3 KLHL13 RP1 MERTK

1.36e-041891846e059be2965cca70ff5576df055d0af1775b76e00
ToppCellrenal_medulla_nuclei|World / Celltypes from Cells and Nuclei per compartment and clinical group

CDC42BPA ACACB ANK3 OSBPL3 SORCS2 RP1

1.36e-041891846830d9cd0dd706bce22eb2416f07b2c31c870a05a
ToppCellAT2_cells-Cryobiopsy_01|World / lung cells shred on cell class, cell subclass, sample id

ANK3 FOLR1 LRRK2 RTN4RL1 SORCS2 ACSS3

1.36e-0418918462d32f09efa982ae458568f6b1cd06bb5078d42a3
ToppCellAdult-Epithelial-ciliated_cell|Adult / Lineage, Cell type, age group and donor

ABCA13 VWA3B RP1 CFAP69 ANKFN1 CFAP46

1.36e-041891846b679920f0993e917dd86da082113bfbd85ea1ca5
ToppCellCOVID-19-lung-Ciliated|lung / Disease (COVID-19 only), tissue and cell type

ABCA13 PRSS12 VWA3B RP1 ANKFN1 CFAP46

1.36e-04189184627329c4661aebabd19fac7fe5dca263fe99d76f3
ToppCellCOPD-Epithelial-Ciliated|Epithelial / Disease state, Lineage and Cell class

ABCA13 VWA3B RP1 PLCH1 ANKFN1 CFAP46

1.36e-0418918463e77883db34722b9ce0a03ea74caefc92dc7feff
ToppCellPCW_05-06-Epithelial-Epithelial_airway-epi_intermediate_(1)|PCW_05-06 / Celltypes from embryonic and fetal-stage human lung

FOLR1 GRB7 UCP2 MTTP RP1 PLCH1

1.44e-04191184672dbd2e0fabfca8d6f604df35277d3574739a0b3
ToppCellFetal_29-31_weeks-Epithelial-alveolar_epithelial_cell_type_2-D150|Fetal_29-31_weeks / Lineage, Cell type, age group and donor

ANK3 LRRK2 PTPRK SORCS2 PLCH1 ACSS3

1.44e-04191184634cc997e4e5c727495f321e6807a84aa124da486
DiseaseMultiple carboxylase deficiency

HLCS BTD

3.66e-0521792cv:C0026755
Diseasecarbamoyl phosphate synthetase I deficiency disease (implicated_via_orthology)

CAD CPS1

3.66e-0521792DOID:9280 (implicated_via_orthology)
Diseasenon-alcoholic fatty liver disease (biomarker_via_orthology)

ACACA ACACB INSR HP UCP2

4.78e-05651795DOID:0080208 (biomarker_via_orthology)
DiseaseMalignant neoplasm of breast

PCDHGB6 ADAMTS1 ACO2 GNB1L KIF16B HLCS GRB7 CFHR5 TRAPPC8 TTC3 RGS2 BRCA2 HP SPATA21 PLA2G4A ATM DNMT3A DNMT3B

1.01e-04107417918C0006142
Diseaseendometriosis of uterus (is_marker_for)

DNMT3A DNMT3B

1.09e-0431792DOID:288 (is_marker_for)
Diseasepre-malignant neoplasm (biomarker_via_orthology)

INSR ATM MUC2

1.40e-04171793DOID:0060071 (biomarker_via_orthology)
DiseaseGastric Adenocarcinoma

AXL INSR WEE2 ATM

1.61e-04451794C0278701
Diseasesyndromic X-linked intellectual disability Claes-Jensen type (implicated_via_orthology)

KDM5C KDM5D

2.18e-0441792DOID:0060809 (implicated_via_orthology)
Diseasecongenital heart disease (biomarker_via_orthology)

DNMT3A DNMT3B

2.18e-0441792DOID:1682 (biomarker_via_orthology)
DiseaseConventional (Clear Cell) Renal Cell Carcinoma

KDM5C LRRK2 GRB7 ZNF804A ATM MERTK

2.96e-041481796C0279702
Diseasemuscular disease (implicated_via_orthology)

ACACA ACACB

3.62e-0451792DOID:0080000 (implicated_via_orthology)
Diseasemental development measurement

PCDHGB6 PCDHGB1 EFR3A

4.58e-04251793EFO_0008230
Diseasetype 2 diabetes mellitus (implicated_via_orthology)

OGT ADAMTS4 INSR UCP2 OGA

4.60e-041051795DOID:9352 (implicated_via_orthology)
Diseaseserum gamma-glutamyl transferase measurement

CDC42BPA AXL CPS1 ZNRF2 ZNF804A RBM25 SPATA21 HACE1 YY1AP1 RP1 IGSF21 ALPK2 HSPB7 ACSS3 DNMT3B

4.83e-0491417915EFO_0004532
Diseasehepatocellular carcinoma (is_marker_for)

KDM5C INSR GRB7 CPS1 HP ARID2 DNMT3A DNMT3B

5.29e-043011798DOID:684 (is_marker_for)
Diseaseoral squamous cell carcinoma (is_marker_for)

HP ARID2 ATM DNMT3B

5.90e-04631794DOID:0050866 (is_marker_for)
Diseasebody weight

IPPK GALNTL6 COPG1 NELFCD INSR RTN4RL1 RET CPS1 ERLEC1 EFR3A CADPS BTD HACE1 DLEU7 TLN2 UNC79 PCM1 DYNC1I2

6.94e-04126117918EFO_0004338
Diseasehepatocyte growth factor activator measurement

RGS12 HTT

7.53e-0471792EFO_0008152
Diseaseinfertility (implicated_via_orthology)

BRCA2 ATM

7.53e-0471792DOID:5223 (implicated_via_orthology)
Diseasefatty liver disease (implicated_via_orthology)

ACACA ACACB INSR

8.71e-04311793DOID:9452 (implicated_via_orthology)
Diseaseheel bone mineral density, urate measurement

OSBPL3 SORCS2 PLAGL1 YY1AP1 PLCH1 PCM1

8.82e-041821796EFO_0004531, EFO_0009270
Diseasemosquito bite reaction itch intensity measurement, mosquito bite reaction size measurement

GALNTL6 RGS12 TTC7B PTPRK HACE1 PLA2G4A TXNDC8 HTT

9.24e-043281798EFO_0008377, EFO_0008378
DiseasePARTINGTON X-LINKED MENTAL RETARDATION SYNDROME

KDM5C RPL10

1.00e-0381792C0796250
Diseasefemale breast cancer (is_implicated_in)

RTEL1 ATM

1.00e-0381792DOID:0050671 (is_implicated_in)
DiseaseSchizophrenia

ANK3 ABCA13 GNB1L GABRQ ZNF804A RGS2 RGS12 HP UCP2 PLA2G4A ATM PCM1 PCNT DNMT3B

1.04e-0388317914C0036341
Diseasefatty liver disease (biomarker_via_orthology)

INSR CPS1 UCP2

1.05e-03331793DOID:9452 (biomarker_via_orthology)
Diseasealcohol use disorder (implicated_via_orthology)

KDM5C KDM5D CHRNA1 RYR3 ARID2 UNC79

1.26e-031951796DOID:1574 (implicated_via_orthology)
DiseaseMotor retardation

FOLR1 HACE1

1.28e-0391792C0424230
Diseaseresponse to serotonin-norephinephrine reuptake inhibitor

GALNTL6 ANK3 SORCS2

1.35e-03361793EFO_0006325
DiseaseMammary Carcinoma, Human

PCDHGB6 ADAMTS1 GRB7 RGS2 BRCA2 HP PLA2G4A ATM DNMT3A DNMT3B

1.45e-0352517910C4704874
DiseaseMammary Neoplasms, Human

PCDHGB6 ADAMTS1 GRB7 RGS2 BRCA2 HP PLA2G4A ATM DNMT3A DNMT3B

1.45e-0352517910C1257931
Diseaseviral load

ADAMTS1 CADPS ZNF90 IGSF21 PCNT

1.47e-031361795EFO_0010125
DiseaseMammary Neoplasms

PCDHGB6 ADAMTS1 GRB7 RGS2 BRCA2 HP PLA2G4A ATM DNMT3A DNMT3B

1.49e-0352717910C1458155
Diseasealcohol consumption measurement

CAD ACACA ACACB ACO2 CPS1 ZNF804A RGS12 PTPRK CADPS ARID2 HACE1 MTTP ZNF90 PLCH1 HTT ACSS3 DNMT3B

1.54e-03124217917EFO_0007878
DiseaseAnemia, Sickle Cell

CAD HP

1.59e-03101792C0002895
Diseasehyperglycemia (is_implicated_in)

NEUROD1 HP

1.59e-03101792DOID:4195 (is_implicated_in)
DiseasePeripheral T-Cell Lymphoma

ATM DNMT3A

1.59e-03101792C0079774
DiseaseBreast Carcinoma

PCDHGB6 ADAMTS1 GRB7 RGS2 BRCA2 HP PLA2G4A ATM DNMT3A DNMT3B

1.73e-0353817910C0678222
DiseaseAutism Spectrum Disorders

TSHZ3 GABRQ DNMT3A DNMT3B

1.81e-03851794C1510586
DiseaseInherited neuropathies

WASHC5 MTTP ATM

1.84e-03401793C0598589
Diseasegastric adenocarcinoma (is_implicated_in)

RTEL1 ABCA13

1.94e-03111792DOID:3717 (is_implicated_in)
Diseaserespiratory system disease

RTEL1 ACO2 PTPRK MUC2 RIC1

1.95e-031451795EFO_0000684
Diseasecolitis (biomarker_via_orthology)

HP TACR2 MUC2

2.12e-03421793DOID:0060180 (biomarker_via_orthology)
Diseaseasthma

ADAMTS4 RTEL1 ACO2 KIF16B GRB7 ZNF217 CFHR5 PTPRK TATDN1 MUC2 UNC79 PCNT

2.21e-0375117912MONDO_0004979
Diseaseprostatitis (biomarker_via_orthology)

DNMT3A DNMT3B

2.32e-03121792DOID:14654 (biomarker_via_orthology)
DiseaseBipolar Disorder

ANK3 ABCA13 GNB1L ZNF804A BRCA2 UCP2 SORCS2 PLA2G4A PCNT

2.65e-034771799C0005586
DiseaseCraniofacial Abnormalities

FOLR1 KIAA0586 STRA6 DNMT3A DNMT3B

2.68e-031561795C0376634
Diseaseplasma beta-amyloid 1-42 measurement

ANK3 ACSS3

2.73e-03131792EFO_0005660
Diseaseautoimmune thrombocytopenic purpura (is_marker_for)

DNMT3A DNMT3B

2.73e-03131792DOID:8924 (is_marker_for)
Diseasecolitis (implicated_via_orthology)

TACR2 MUC2

2.73e-03131792DOID:0060180 (implicated_via_orthology)
Diseasediabetic neuropathy (implicated_via_orthology)

TRPA1 INSR

3.17e-03141792DOID:9743 (implicated_via_orthology)
DiseaseCrohn Disease

LRRK2 MUC2 DNMT3A

3.49e-03501793C0010346
DiseaseMood Disorders

ANK3 ZNF804A HP HTT DNMT3B

3.68e-031681795C0525045
Diseasemean platelet volume

PCDHGB6 PCDHGB1 NELFCD LRRK2 KIF16B ZNF217 CPS1 RGS12 GRTP1 BTD TESK2 UCP2 C4BPB HTT

3.87e-03102017914EFO_0004584
DiseaseHuntington's disease (is_marker_for)

KDM5C UCP2 HTT

4.12e-03531793DOID:12858 (is_marker_for)
Diseasesyndromic intellectual disability (implicated_via_orthology)

KDM5C KDM5D

4.15e-03161792DOID:0050888 (implicated_via_orthology)
DiseaseInherited oocyte maturation defect

PANX1 WEE2

4.15e-03161792cv:CN238505
Diseasebehavioural inhibitory control measurement

EFR3A STRA6

4.15e-03161792EFO_0008467
DiseaseMonogenic diabetes

INSR NEUROD1

4.15e-03161792C3888631
Diseasehepatocellular carcinoma (biomarker_via_orthology)

CAD INSR DNMT3A DNMT3B

4.30e-031081794DOID:684 (biomarker_via_orthology)
Diseaseperinatal necrotizing enterocolitis (biomarker_via_orthology)

TLR6 MUC2

4.69e-03171792DOID:8677 (biomarker_via_orthology)
DiseaseCrohn's disease

GALNTL6 ACO2 LRRK2 GRB7 CELSR3 PTPRK PLA2G4A DNMT3A

5.69e-034411798EFO_0000384
Diseasecancer (implicated_via_orthology)

RET DST GRTP1 BRCA2 ATM TOP1MT

6.04e-032681796DOID:162 (implicated_via_orthology)

Protein segments in the cluster

PeptideGeneStartEntry
LCQRAKVAMSHFEPN

ACO2

26

Q99798
HYPENEMTCNSKISC

COP1

461

Q8NHY2
CKESDSPHAVTVYML

ERLEC1

436

Q96DZ1
SLMDSKACQSFHEAL

CARD10

681

Q9BWT7
MPDAQTIECHNCKLF

ERVK13-1

221

Q9NX77
VEKLMPLSSFCSAFH

DNMT3A

341

Q9Y6K1
CNPVMIDAIKVSAAH

DNMT3B

716

Q9UBC3
HDPKCRNQSLEFSTM

AKAP4

456

Q5JQC9
MFPEHSGNVKLSCQF

ALPK2

1796

Q86TB3
HFEVNPDCSVSRAEM

ARID2

531

Q68CP9
AQMCAPKSAENLEEF

CFAP46

91

Q8IYW2
QPSVLEAHDLKDMAC

ABCA13

4076

Q86UQ4
ATPAVFEHMEQCAVK

ACACA

396

Q13085
MRNFDLTAIPCANHK

ACACA

1386

Q13085
HIMKCNLGSPEDFLS

DHX29

1021

Q7Z478
MACHSQSIKPFVESF

EFR3A

86

Q14156
CKQDPSVLHTEEMRF

ST13P5

16

Q8NFI4
CKQDPSVLHTEEMRF

ST13

16

P50502
FDSEMPCETVSKIHL

KIF16B

236

Q96L93
MTVSCQAHNFAAIPE

RTN4RL1

36

Q86UN2
MNKSPHISNCSVASD

RAD51AP1

136

Q96B01
VDFVCSKVMAHSSPQ

RBM25

791

P49756
DLHKQPTSEANCSAM

PDS5A

521

Q29RF7
HFKEEQCAPALNLEM

RIC1

121

Q4ADV7
VFNMPHDDAKQCASL

ADAMTS1

406

Q9UHI8
CGFIPFSSDVTHEMK

IPPK

141

Q9H8X2
FLKCSVPLHSNEDMV

PCDHGB6

766

Q9Y5F9
IVTHFPFDEQNCSMK

CHRNA1

151

P02708
KPDMSQVLDCIFSHA

ACACB

1161

O00763
RNFDLTAVPCANHKM

ACACB

1506

O00763
NKVAHSFNCTPIEGM

PA2G4

171

Q9UQ80
SNPCNFDHASLFEMV

CADPS

671

Q9ULU8
SNPRKCMAASLDVHE

NXF3

241

Q9H4D5
QSKNFLVPDCEHARM

IL17RA

176

Q96F46
QKMAAAVTCSFSHGP

PRSS12

261

P56730
CHEEPVMDLDFDSQK

GNB1L

206

Q9BYB4
MACAIADAFNLPSSH

MAT2B

261

Q9NZL9
QPILNEHTFCAGMSK

HP

331

P00738
KLAEAHPDCLMLNFT

NELFCD

161

Q8IXH7
SEAACMKDFSHPNVI

MERTK

636

Q12866
LANFPSDAHMVACAS

DLEU7

196

Q6UYE1
LFHETELSACMKPQI

LRIT2

241

A6NDA9
HVGDFNQKACSTSEM

DST

3296

Q03001
AACSLDLHKFPMDKQ

GABRQ

181

Q9UN88
CTKNRPFDFHSVMEE

LONRF1

346

Q17RB8
FNPSACLDEHLMQFK

HERC1

4566

Q15751
VFSHEELICKMAAFP

KDM5D

631

Q9BY66
CIPVVTNMEAFSSEH

HLCS

436

P50747
CQSAVMSATFAKFHP

DYNC1I2

331

Q13409
GIHMPCKSVVFAQDS

DDX60L

1281

Q5H9U9
PFLKEHMDEVCSSQL

PCM1

1606

Q15154
CEFPLHQENSEMCKV

MTTP

866

P55157
PSMVVCASNEDHKIA

PCDHGB1

781

Q9Y5G3
APKIHMDCSNLTALA

MUC2

761

Q02817
MTSPRFIEFVCKHDE

HACE1

471

Q8IYU2
CNIMIFHPTKEEFND

KDM4D

16

Q6B0I6
HDTFQNELMCFDPDT

KLHL9

456

Q9P2J3
PEVAESGCKMLNHLF

LRRK2

456

Q5S007
VFHMDPSDDLNATCV

LRRC52

201

Q8N7C0
VGEHMKDCLPNFVTT

LYPD4

146

Q6UWN0
FEDMENVPLDRSSHC

INSR

1321

P06213
LPMCTNKFIDHISCE

OR2F2

166

O95006
AAPHICSDLKFIMEE

PANX1

131

Q96RD7
HTMEPCTSDEFFQAL

KLHL5

186

Q96PQ7
SDHPAEQRGMFTKEC

PCNT

201

O95613
FVDQACGPSHSKESM

GPR75

441

O95800
HSLFPEKMVSSCLDA

GRB7

196

Q14451
ICFSFTTVPKMLANH

OR1F1

71

O43749
GTVMNTFAHKCQLPE

HSPB7

116

Q9UBY9
DVCSDFPLSAMLEAH

GMPPA

116

Q96IJ6
KAAMNFFQSVPECEH

ATM

621

Q13315
EESFQKALRMCHPSI

CPS1

806

P31327
VFNMLHDNSKPCISL

ADAMTS4

366

O75173
VFPSNVICKTFHSMA

FBH1

501

Q8NFZ0
KNMSHCRQPSDSSVD

HTT

631

P42858
MVSAAAFQCAKPTID

IGSF10

271

Q6WRI0
EALFSCEVKHPALSM

IGSF21

316

Q96ID5
ITHDTFQKELMCFDP

KLHL13

496

Q9P2N7
HSLFTCPENEEMVLS

BRCA2

2251

P51587
HCTCPVQFSMVKVSE

GAS2L2

216

Q8NHY3
AVDADMQVHFPISCQ

COL6A5

216

A8TX70
MQVHFPISCQKDSLA

COL6A5

221

A8TX70
ECHTFMQKIFSEPGS

GRTP1

301

Q5TC63
KEQNACLTHPDRSAM

C7orf77

71

A4D0Y5
DMFLVANLGTKEPCH

BTD

166

P43251
PVNVSDKITFMCNDH

C4BPB

96

P20851
MPDSFSEQQAKDLAC

ANK3

2821

Q12955
KFMLILASCHPEQFD

ATAD3C

271

Q5T2N8
MKHPSAVTACNLDLE

COPG2

316

Q9UBF2
AVEFQCKFPHKAMIS

CFHR5

536

Q9BXR6
VEVFCNTSMEASPKA

MAP7D3

311

Q8IWC1
SNSALHFCKAPHAMD

CDC20B

136

Q86Y33
APNFVMSAAHCVANV

ELANE

61

P08246
NFTCMKDQLEHPSAQ

GDF9

236

O60383
MKHPSAVTACNLDLE

COPG1

316

Q9Y678
PFCQGHEMAVNLSKA

EIF2B2

196

P49770
ENFPVSHKDFIGCMR

CELSR3

1681

Q9NYQ7
GIMVEFCDNPKTAAH

CFAP69

631

A5D8W1
NLVCDSHALKPMAQS

SLC22A12

136

Q96S37
MHLACPEEEDKATAA

PPRC1

276

Q5VV67
SFRAGQHEPECKQMS

C4orf51

66

C9J302
CHTKETLFMAGDTAP

TACR2

351

P21452
EMAPACKRHFIQDTC

FOLR1

91

P15328
HPALSCKMAAEFDTF

MFNG

116

O00587
SSEFSKMQEDLCHIA

OSBPL3

326

Q9H4L5
PTMKENDTHCIDFSY

PTPRK

96

Q15262
NVIPHFFCDMSALLK

OR1E2

181

P47887
MAEANHFIDLSQIPC

OGT

606

O15294
CLHVKPDVSELMFAD

PLA2G4A

331

P47712
KLAACSFSADVSPME

RP1

381

P56715
PDLKERFCMNFLHTS

RP1

2026

P56715
SENRCQKALPMAHSA

SMG8

496

Q8ND04
VPNACLFTMNKEDHT

POLR2J3

26

Q9H1A7
KDRTLFHPVSNSCMD

GALNTL6

546

Q49A17
EKMCEESASFDLTPH

RTEL1

256

Q9NZ71
PHTDNMICAVSKASL

RSBN1L

721

Q6PCB5
DCSFGHVPNVELMKF

SZT2

301

Q5T011
FLAVQHDCRPMDKSA

RGS2

6

P41220
MDSDFSHAFQKELTC

TRIM43

1

Q96BQ3
FELSEQTKLPMFLHC

TATDN1

136

Q6P1N9
LQTHDPNKMAFGCEE

PLAGL1

81

Q9UM63
FCSVEQNALSDMAPH

SPATA21

291

Q7Z572
IDHNMCAADKEVFSS

OGA

176

O60502
AKVDEFPLCGHMVSD

RPL10

41

P27635
DHRPKSNSMVDVCSV

GNL3L

506

Q9NVN8
TDGVKHSMNPFCEIA

ETFB

31

P38117
HSMNPFCEIAVEEAV

ETFB

36

P38117
PAAMESHQDFRSIKA

PRAM1

6

Q96QH2
IHNCSEKMLTAPFAG

SORCS2

326

Q96PQ0
VNMASFPECTAAAIK

MRRF

146

Q96E11
AHQPMDAICAVEISS

CDC42BPA

1406

Q5VT25
PPHSKLMTCFQEADA

REELD1

101

A0A1B0GV85
SARNFNVPMCKAADV

OXCT2

226

Q9BYC2
KIEVSQSHPAMTAFC

STRA6

571

Q9BX79
EMAKAQSHDCVPVLS

ACSS3

276

Q9H6R3
ESVDHTSDCPMQLFF

ANKFN1

666

Q8N957
SMLHPQFSKIENCSF

C12orf40

136

Q86WS4
CSRFINHMKNFSESP

C12orf42

61

Q96LP6
MACAEFSFHVPSLEE

C11orf54

1

Q9H0W9
PVCSKFVSSDEMDLH

ZNRF2

161

Q8NHG8
KANLMTDDLPCHFTS

UCP2

206

P55851
SCMPFIKSQHELLFS

ZWILCH

476

Q9H900
VDKTPVMCSHFAQDV

ZNF92

71

Q03936
PIHQAAFSGSKECME

TRPA1

201

O75762
LMLHTADSACDPNNK

WASHC5

376

Q12768
ANEFMCSASEKSHQE

ZNF555

601

Q8NEP9
TPSQEKMSHQSFCAR

ZSCAN32

476

Q9NX65
CKMAFDGEAPATAHQ

ZFHX2

2456

Q9C0A1
SCHVFMVDPDLFNHK

RGS12

336

O14924
CLSQLAHDDGKPMFI

SPATC1

576

Q76KD6
LEPASAFAMACASVK

RYR3

4136

Q15413
SRQCCEEVMAKEPFH

SPDYC

166

Q5MJ68
MAFEDKEIHDQNCPL

TRAF6

196

Q9Y4K3
EFEMSPRCANLALKH

FGD6

996

Q6ZV73
EISHVNFRMFSCPKE

ZSCAN5A

41

Q9BUG6
DFLSEAVCMKEFDHP

AXL

581

P30530
CNHQRATPSTFEKSM

TOP1MT

466

Q969P6
PHVDDCVFAAEFMSN

TTC3

21

P53804
MTTANCGAHDELDFK

NFATC3

1

Q12968
IMDHKNSLCFPEDAE

ROCK2

306

O75116
HSTPQMAATFAKLCR

ELAC1

291

Q9H777
AETCHIKTIPTFQMF

TXNDC8

66

Q6A555
NSPAAEFSCHEMDSE

TSHZ3

61

Q63HK5
HFSDSDAKMFQTCVP

PLCH1

1446

Q4KWH8
NCVGFDHTVKPVSDM

CAD

786

P27708
PLKDFHMSELSCNIT

TLR6

571

Q9Y2C9
FHPESTKCNDMRQTG

UNKL

281

Q9H9P5
PFCAFAHVEKSLGMV

UNKL

301

Q9H9P5
PKCAELHYMVVATDQ

RET

476

P07949
TPEDKAHMNVDIACA

YY1AP1

676

Q9H869
IAKPSVMCSHFAQDL

ZNF626

71

Q68DY1
YVMCAATSPAVKLHD

UBP1

66

Q9NZI7
IAKSPVMCFHFAQDL

ZNF90

71

Q03938
TACTQEAANLFPMSH

TTC7B

716

Q86TV6
SCEELNSEMTEHFPQ

ZGRF1

266

Q86YA3
MLTACKQASFHPDVS

TLN2

2216

Q9Y4G6
HAAESISSPYKICMV

ZNF217

206

O75362
LLEQAAHCFINMKSP

TRAPPC8

541

Q9Y2L5
MDSDFSHAFQKELTC

TRIM43B

1

A6NCK2
KPSNIFICHKMQSES

WEE2

341

P0C1S8
LKMDAVPTIFDFCTH

THAP2

71

Q9H0W7
EVFPLAHVCNDTNKM

VWA3B

891

Q502W6
CLASHRNNMEASVPK

WHAMMP3

16

Q1A5X7
AHIKCEDPTSYMEVA

SLC30A1

386

Q9Y6M5
ASALPAAQAHEAMDC

TESK2

501

Q96S53
HSKTLERFCSVMPAN

ZFC3H1

1856

O60293
ETCHVNFRMFSCPKE

ZSCAN5C

41

A6NGD5
VCAAVSMDPDIQVHS

TKTL1

546

P51854
SSPCDSDHDMAFPVK

KIAA0586

1066

Q9BVV6
SDHDMAFPVKEICAE

KIAA0586

1071

Q9BVV6
TCDTMVFNHPAIKKF

YEATS2

101

Q9ULM3
FTDEQPTVMTDKCHD

UNC79

1996

Q9P2D8
SEEKTNSFHPPEAMC

ZNF804A

271

Q7Z570
NSFHPPEAMCRDKET

ZNF804A

276

Q7Z570
VFSHEELICKMAACP

KDM5C

641

P41229
CEIPIDNIMSFDSHS

NEUROD1

326

Q13562