Cluster composition

Functions

CategoryNameIntersectionWithQueryPValueGenesInTermGenesInQueryGenesInTermInQueryID
Domainaa-tRNA-synth_II

EIF2AK4 DARS2

2.04e-0318702IPR006195
DomainAA_TRNA_LIGASE_II

EIF2AK4 DARS2

2.04e-0318702PS50862
Domain-

SPTBN4 PTPN14 SH2B3 ELMO2 OSBPL10 AKAP13

3.44e-033917062.30.29.30
DomainPH

SPTBN4 SH2B3 ELMO2 OSBPL10 AKAP13

3.88e-03278705SM00233
DomainPH_DOMAIN

SPTBN4 SH2B3 ELMO2 OSBPL10 AKAP13

3.94e-03279705PS50003
DomainPH_domain

SPTBN4 SH2B3 ELMO2 OSBPL10 AKAP13

4.00e-03280705IPR001849
DomainBromodomain_CS

BPTF BRWD1

4.25e-0326702IPR018359
Pubmed

Functional proteomics establishes the interaction of SIRT7 with chromatin remodeling complexes and expands its role in regulation of RNA polymerase I transcription.

BPTF RRS1 CAPN1 NUP98 HELZ2 SMC4 SRPK1 LAS1L HECTD1 SNRNP200

9.57e-07653721022586326
Pubmed

LRRC31 inhibits DNA repair and sensitizes breast cancer brain metastasis to radiation therapy.

SMC4 SRPK1 AKAP13 EIF2AK4 HECTD1 SNRNP200

4.05e-0620272633005030
Pubmed

TNF receptor 1-dependent beta cell toxicity as an effector pathway in autoimmune diabetes.

PRF1 TNFRSF1A

4.23e-06272210201999
Pubmed

USP7 targets XIAP for cancer progression: Establishment of a p53-independent therapeutic avenue for glioma.

DNHD1 KMT2D MINK1 ASPM SRPK1 SNRNP200

9.38e-0623472636243803
Pubmed

Charting the landscape of tandem BRCT domain-mediated protein interactions.

DNHD1 WDR33 CAPN1 NUP98 ASPM SRPK1 TSEN54 LAS1L SNRNP200

1.00e-0567072922990118
Pubmed

A central chaperone-like role for 14-3-3 proteins in human cells.

PTPN14 MAP7D3 ELMO2 DAPK2 MINK1 OSBPL10 AKAP13 N4BP3 HECTD1 OTOG

1.10e-05861721036931259
Pubmed

NUP98-BPTF promotes oncogenic transformation through PIM1 upregulation.

BPTF NUP98

1.27e-05372238940430
Pubmed

Neuron-related blood inflammatory markers as an objective evaluation tool for major depressive disorder: An exploratory pilot case-control study.

IL34 TNFRSF1A

1.27e-05372230059939
Pubmed

Cutting edge: systemic inhibition of angiogenesis underlies resistance to tumors during acute toxoplasmosis.

PRF1 TNFRSF1A

1.27e-05372211342601
Pubmed

Proteomic, functional, and domain-based analysis of in vivo 14-3-3 binding proteins involved in cytoskeletal regulation and cellular organization.

PTPN14 SRPK1 AKAP13 N4BP3 HECTD1 SNRNP200

1.53e-0525572615324660
Pubmed

Critical role for perforin-, Fas/FasL-, and TNFR1-mediated cytotoxic pathways in down-regulation of antigen-specific T cells during persistent viral infection.

PRF1 TNFRSF1A

2.53e-05472211752172
Pubmed

Mycobacterium tuberculosis-specific CD8+ T cells require perforin to kill target cells and provide protection in vivo.

PRF1 TNFRSF1A

2.53e-05472219050279
Pubmed

Acute hepatotoxicity of Pseudomonas aeruginosa exotoxin A in mice depends on T cells and TNF.

PRF1 TNFRSF1A

4.21e-0557229820556
Pubmed

Islet-specific expression of IL-10 promotes diabetes in nonobese diabetic mice independent of Fas, perforin, TNF receptor-1, and TNF receptor-2 molecules.

PRF1 TNFRSF1A

4.21e-05572210946317
Pubmed

The role of TNF-TNFR2 interactions in generation of CTL responses and clearance of hepatic adenovirus infection.

PRF1 TNFRSF1A

4.21e-05572212960267
Pubmed

Trypanosoma brucei Co-opts NK Cells to Kill Splenic B2 B Cells.

PRF1 TNFRSF1A

6.31e-05672227403737
Pubmed

Cytotoxic mechanisms employed by mouse T cells to destroy pancreatic β-cells.

PRF1 TNFRSF1A

6.31e-05672222773667
Pubmed

Proteomic analyses reveal distinct chromatin-associated and soluble transcription factor complexes.

BPTF MRPL20 TOMM70 KMT2D MAP7D3 NUP98 SMC4 SNRNP200 DARS2

6.82e-0585772925609649
Pubmed

Menin and Menin-Associated Proteins Coregulate Cancer Energy Metabolism.

BPTF KMT2D WDR33 SMC4 LAS1L DARS2

7.71e-0534172632971831
Pubmed

iNKT cell production of GM-CSF controls Mycobacterium tuberculosis.

PRF1 TNFRSF1A

8.82e-05772224391492
Pubmed

TRIM65 regulates microRNA activity by ubiquitination of TNRC6.

RRS1 ASPM SRPK1 LAS1L HECTD1 DARS2

1.10e-0436472624778252
Pubmed

Four enzymes cooperate to displace histone H1 during the first minute of hormonal gene activation.

BPTF KMT2D

1.17e-04872221447625
Pubmed

Host T cells resist graft-versus-host disease mediated by donor leukocyte infusions.

PRF1 TNFRSF1A

1.17e-04872211046015
Pubmed

Enhanced suppression of polyclonal CD8+25+ regulatory T cells via exosomal arming of antigen-specific peptide/MHC complexes.

PRF1 HLA-H

1.17e-04872228096300
Pubmed

SRCAP complex promotes lung cancer progression by reprograming the oncogenic transcription of Hippo-YAP/TAZ signaling pathway.

BPTF KMT2D PTPN14 MAP7D3 WDR33 SMC4 SNRNP200

1.43e-0454972738280479
Pubmed

Programmed death 1 protects from fatal circulatory failure during systemic virus infection of mice.

PRF1 HLA-H

1.51e-04972223230000
Pubmed

B-cells and IL-4 promote methylcholanthrene-induced carcinogenesis but there is no evidence for a role of T/NKT-cells and their effector molecules (Fas-ligand, TNF-α, perforin).

PRF1 TNFRSF1A

1.51e-04972222212899
Pubmed

Role of innate and adaptive immunity in the outcome of primary infection with Chlamydia pneumoniae, as analyzed in genetically modified mice.

PRF1 TNFRSF1A

1.51e-04972210072530
Pubmed

The E3 ubiquitin ligase HECTD1 contributes to cell proliferation through an effect on mitosis.

BPTF MAP7D3 RRS1 ASPM SRPK1 LAS1L HECTD1 SNRNP200

1.73e-0475972835915203
Pubmed

Localization of serine kinases, SRPK1 (SFRSK1) and SRPK2 (SFRSK2), specific for the SR family of splicing factors in mouse and human chromosomes.

SRPK1 PJA1

1.88e-041072210198174
Pubmed

CD8+ T cells induce cachexia during chronic viral infection.

PRF1 TNFRSF1A

1.88e-041072231110314
Pubmed

Association of beta2-microglobulin with the alpha3 domain of H-2Db heavy chain.

HLA-H TAP2

1.88e-041072214735325
Pubmed

Hectd1 is required for development of the junctional zone of the placenta.

PRF1 HECTD1

1.88e-041072224855001
Pubmed

Regulation of major histocompatibility complex and TAP gene products in preimplantation mouse stage embryos.

HLA-H TAP2

1.88e-04107229764360
Pubmed

CD8+ T cells targeting a single immunodominant epitope are sufficient for elimination of established SV40 T antigen-induced brain tumors.

PRF1 HLA-H

1.88e-041072218768900
Pubmed

Immune effectors required for hepatitis B virus clearance.

PRF1 TNFRSF1A

1.88e-041072220080755
Pubmed

Graft-versus-leukemia (GVL) against mouse blast-crisis chronic myelogenous leukemia (BC-CML) and chronic-phase chronic myelogenous leukemia (CP-CML): shared mechanisms of T cell killing, but programmed death ligands render CP-CML and not BC-CML GVL resistant.

PRF1 TNFRSF1A

1.88e-041072221768400
Pubmed

The PHLPP1 N-Terminal Extension Is a Mitotic Cdk1 Substrate and Controls an Interactome Switch.

MAP7D3 NUP98 ASPM SMC4 SNRNP200

1.94e-0425672533397691
Pubmed

Targeting USP10 induces degradation of oncogenic ANLN in esophageal squamous cell carcinoma.

PTPN14 MAP7D3 RRS1 CAPN1 NUP98 HELZ2 SMC4 SRPK1 LAS1L SNRNP200

2.57e-041257721036526897
Pubmed

The mRNA-bound proteome and its global occupancy profile on protein-coding transcripts.

MRPL20 WDR33 RRS1 HELZ2 SRPK1 LAS1L SNRNP200 DUSP11

2.62e-0480772822681889
Pubmed

Many Th Cell Subsets Have Fas Ligand-Dependent Cytotoxic Potential.

PRF1 TNFRSF1A

2.75e-041272229436413
Pubmed

Ham-2 corrects the class I antigen-processing defect in RMA-S cells.

HLA-H TAP2

2.75e-04127221538753
Pubmed

Cellular inhibitor of apoptosis proteins prevent clearance of hepatitis B virus.

PRF1 HLA-H

2.75e-041272225902529
Pubmed

Genetic association analysis of 13 nuclear-encoded mitochondrial candidate genes with type II diabetes mellitus: the DAMAGE study.

SIRT4 DARS2

3.25e-041372219209188
Pubmed

Regulation of activated CD4+ T cells by NK cells via the Qa-1-NKG2A inhibitory pathway.

PRF1 HLA-H

3.25e-041372217509909
Pubmed

Interaction of murine MHC class I molecules with tapasin and TAP enhances peptide loading and involves the heavy chain alpha3 domain.

HLA-H TAP2

3.25e-04137229973410
Pubmed

MUC1-specific anti-tumor responses: molecular requirements for CD4-mediated responses.

PRF1 TNFRSF1A

3.78e-041472212147624
Pubmed

Condensin I and II Complexes License Full Estrogen Receptor α-Dependent Enhancer Activation.

SMC4 HECTD1

3.78e-041472226166704
Pubmed

Identifications of novel host cell factors that interact with the receptor-binding domain of the SARS-CoV-2 spike protein.

TOMM70 ELMO2 MINK1 OSBPL10 SRPK1 AKAP13 EIF2AK4

3.97e-0465072738777146
Pubmed

MHC class I family proteins retard systemic lupus erythematosus autoimmunity and B cell lymphomagenesis.

PRF1 HLA-H

4.36e-041572221964024
Pubmed

Control of Viral Infection by Natural Killer Cell Inhibitory Receptors.

PRF1 HLA-H

4.98e-041672232726632
Pubmed

Cellular and molecular requirements for rejection of B16 melanoma in the setting of regulatory T cell depletion and homeostatic proliferation.

PRF1 HLA-H

6.33e-041872222312128
Pubmed

Interactions of the Antiviral Factor Interferon Gamma-Inducible Protein 16 (IFI16) Mediate Immune Signaling and Herpes Simplex Virus-1 Immunosuppression.

RRS1 NUP98 HELZ2 SRPK1 LAS1L

6.38e-0433272525693804
Pubmed

A novel miR1983-TLR7-IFNβ circuit licenses NK cells to kill glioma cells, and is under the control of galectin-1.

PRF1 TNFRSF1A

7.06e-041972234249474
Pubmed

In-Depth In Vivo Crosslinking in Minutes by a Compact, Membrane-Permeable, and Alkynyl-Enrichable Crosslinker.

PHEX SPTBN4 BPTF ANTXR2 WDR33 RRS1 NUP98 ASPM SMC4 EIF2AK4

7.52e-041442721035575683
Pubmed

Interactome Rewiring Following Pharmacological Targeting of BET Bromodomains.

BPTF RRS1 CAPN1 SRPK1 LAS1L SNRNP200

8.37e-0453372630554943
Pubmed

Myosin-X recruits lamellipodin to filopodia tips.

SPRYD3 OSBPL10 PJA1

8.50e-048972336861887
Pubmed

The microcephaly gene Donson is essential for progenitors of cortical glutamatergic and GABAergic neurons.

DONSON LHX6

8.65e-042172233739968
Pubmed

Comprehensive interactome profiling of the human Hsp70 network highlights functional differentiation of J domains.

MRPL20 PTPN14 RRS1 MINK1 ASPM SRPK1 AKAP13 LAS1L SNRNP200 DARS2

9.50e-041487721033957083
Pubmed

The E3 ubiquitin ligase FBXL6 controls the quality of newly synthesized mitochondrial ribosomal proteins.

TOMM70 MAP7D3 RRS1 SMC4 SRPK1 HECTD1

9.56e-0454772637267103
Pubmed

Phosphoproteome analysis of the human mitotic spindle.

NUP98 ASPM SMC4 SNRNP200

9.64e-0421072416565220
Pubmed

A High-Density Human Mitochondrial Proximity Interaction Network.

MRPL20 TOMM70 PTPN14 MAP7D3 WDR33 RRS1 NUP98 MIGA1 LAS1L DARS2

9.95e-041496721032877691
Pubmed

Large-scale characterization of HeLa cell nuclear phosphoproteins.

BPTF KMT2D MINK1 NUP98 HELZ2 IQCN SNRNP200

1.11e-0377472715302935
Pubmed

Chlamydia evasion of neutrophil host defense results in NLRP3 dependent myeloid-mediated sterile inflammation through the purinergic P2X7 receptor.

PRF1 TNFRSF1A

1.13e-032472234526512
Pubmed

Characterizing WW domain interactions of tumor suppressor WWOX reveals its association with multiprotein networks.

PTPN14 WDR33 SRPK1 SNRNP200

1.14e-0322072424550385
Pubmed

Inactivation of the microRNA-183/96/182 cluster results in syndromic retinal degeneration.

FADS3 ANTXR2 HLA-H TNFRSF1A

1.24e-0322572423341629
Pubmed

Mapping the MOB proteins' proximity network reveals a unique interaction between human MOB3C and the RNase P complex.

PTPN14 MINK1 SMC4 SRPK1 BRWD1

1.44e-0339972537536630
Pubmed

Nucleolar proteome dynamics.

RRS1 SRPK1 LAS1L SNRNP200 DUSP11

1.79e-0341972515635413
Pubmed

Proteomic profiling of VCP substrates links VCP to K6-linked ubiquitylation and c-Myc function.

PTPN14 RRS1 CAPN1 ASPM SMC4 SRPK1 AKAP13 LAS1L SNRNP200

1.87e-03135372929467282
Pubmed

Centronuclear myopathy in mice lacking a novel muscle-specific protein kinase transcriptionally regulated by MEF2.

CAPN1 SRPK1

1.89e-033172216140986
Pubmed

A protein interaction landscape of breast cancer.

TOMM70 PTPN14 RRS1 SRPK1 LAS1L TAP2

2.02e-0363472634591612
CoexpressionBUSSLINGER_GASTRIC_IMMUNE_CELLS

BPTF KMT2D ANTXR2 MAP7D3 WWC3 SH2B3 ELMO2 PRF1 NUP98 HLA-H AKAP13 TSEN54 TAP2 SNRNP200 BTN3A1 BRWD1

2.23e-0614927216M40023
CoexpressionGRAESSMANN_APOPTOSIS_BY_SERUM_DEPRIVATION_UP

TBXA2R RSAD2 PTPN14 DONSON PRF1 DAPK2 HELZ2 HLA-H TAP2 SIRT4

6.91e-066167210MM977
CoexpressionGSE21546_ELK1_KO_VS_SAP1A_KO_AND_ELK1_KO_DP_THYMOCYTES_UP

RSAD2 WWC3 HELZ2 OSBPL10 TAP2 BTN3A1

1.73e-05197726M7545
CoexpressionZENG_GU_POST_ICB_METAGENE_31

DONSON SH2B3 PRF1 HLA-H TNFRSF1A ERMARD

2.41e-05209726MM17088
CoexpressionGRAESSMANN_APOPTOSIS_BY_SERUM_DEPRIVATION_UP

TBXA2R RSAD2 PTPN14 DONSON PRF1 DAPK2 HELZ2 TAP2 SIRT4

2.47e-05567729M1097
CoexpressionSAGIV_CD24_TARGETS_UP

ASPM SMC4 N4BP3

2.95e-0522723M4144
CoexpressionFOURATI_BLOOD_TWINRIX_AGE_25_83YO_RESPONDERS_VS_POOR_RESPONDERS_0DY_DN

IL34 RSAD2 PTPN14 ZMYND10 CAPN1 HELZ2 LAS1L SYNE4 BTN3A1 FCHSD1

3.58e-057467210M40863
ToppCellfacs-Lung-Endomucin-24m-Endothelial-Artery_endothelial_cell|Lung / Lung_Trachea - method, tissue, subtissue, age, lineage, cell ontology and free annotation

PTPN14 FADS3 MARCHF3 ASPM PABPC4L

1.44e-06119725c3f1223356e7f245a460ea5568a223e34e458dc1
Diseaseaspirin-induced respiratory disease (is_implicated_in)

TBXA2R TAP2

2.92e-0411692DOID:0080822 (is_implicated_in)
Diseasebirth weight

PTPN14 SH2B3 PABPC4L AKAP13 MIGA1 PJA1

3.44e-04399696EFO_0004344
Diseasecolon carcinoma (is_marker_for)

KMT2D TNFRSF1A

4.13e-0413692DOID:1520 (is_marker_for)
Diseasemultiple sclerosis (is_implicated_in)

PRF1 TNFRSF1A TAP2

6.77e-0473693DOID:2377 (is_implicated_in)
Diseaseankylosing spondylitis

ANTXR2 SH2B3 TNFRSF1A

1.28e-0391693EFO_0003898
Diseasevery low density lipoprotein cholesterol measurement, cholesterol:total lipids ratio

SH2B3 CFAP97D1 HELZ2 TSEN54

1.84e-03222694EFO_0008317, EFO_0020943

Protein segments in the cluster

PeptideGeneStartEntry
LFQVIRLYQRRRWTI

CYP4Z2P

26

Q8N1L4
QDTTLRYWERRRSVQ

C9orf50

281

Q5SZB4
QGLYRDTVRLWRLFR

EIF2AK4

816

Q9P2K8
ELRWRSIQYASRGER

BTN3A1

311

O00481
RNRTERLSDLLDWRY

GYS2

586

P54840
QAQYLEEKRRREREW

AKAP13

2591

Q12802
WALLRRQYDRVSLMR

ANTXR2

456

P58335
AQETIRRLQRYWEAR

DNHD1

1151

Q96M86
WLRQLSRRGQLLVRY

DNHD1

4551

Q96M86
RDPELRDWRRNYLLN

ANO9

516

A1A5B4
NILWNRIRNYLSIFR

CAPN1

611

P07384
SRRKYWFLNRRLIIE

BPTF

466

Q12830
IQSYWRMRQDRVRFL

ASPM

1566

Q8IZT6
RADRDRYIRVNWNEI

ASTL

196

Q6HA08
IIWRQRLSRDGRYLV

NWD2

1566

Q9ULI1
IQATWRGYRVRRNLA

IQCN

956

Q9H0B3
WEAARRAEQRRVYLE

HLA-H

171

P01893
YIQILERRRAFSRWL

NUP98

1296

P52948
WYRRSIARRLFLGDQ

KIAA1109

4271

Q2LD37
WISQQRLSLYRRSER

KCNT1

1106

Q5JUK3
RRALSQYLTDRARWR

PRF1

361

P14222
QRYALNRITVWRSRS

LAS1L

66

Q9Y4W2
RQIYASDWVRRARGN

LHX6

136

Q9UPM6
DREFGQWVRLLYRLR

GARIN5A

221

Q6IPT2
RSRKLYGQRERVWAL

FCHSD1

146

Q86WN1
GRRRTWDDDYVLKRQ

HECTD1

1756

Q9ULT8
QRAQVSERELRYLWV

IL34

81

Q6ZMJ4
KPNASRAAQDRRRWY

DUSP11

346

O75319
RRRQERFWYCRLALN

ELMO2

561

Q96JJ3
VNLENFRKQYVRRRW

DAPK2

301

Q9UIK4
YDRRASEIDWQNSRR

CFAP97D1

136

B2RV13
NRFYRRLSALVWEVR

BRWD1

1216

Q9NSI6
YNEWRRTNQRVILLI

MARCHF3

211

Q86UD3
ERRRLADDYQQKRWS

MAP7D3

151

Q8IWC1
SLRNVVLRDYIYNWR

DONSON

551

Q9NYP3
LAWRLYDRQFRPSQR

KLB

721

Q86Z14
WVERTLRSRQRQNYL

ERMARD

561

Q5T6L9
LRLLWRRRVYSAQGS

HELZ2

1791

Q9BYK8
IERRVYDISRWAQRH

FADS3

41

Q9Y5Q0
IRLMWSQRDAYLRRS

PABPC4L

81

P0CB38
REGLRLYLQVDQRWV

OTOG

631

Q6ZRI0
RPRSNSAWQIYLQRR

MINK1

696

Q8N4C8
LRRWEQALTFRNRQA

MIGA1

221

Q8NAN2
WIQYRRQNTFLVLRD

DARS2

71

Q6PI48
QLWDRIDYRAIVSRR

SPDYA

166

Q5MJ70
AQLWLRNRVTDRYFR

MRPL20

6

Q9BYC9
SSWREYKELLQRRQV

TSEN54

376

Q7Z6J9
YRELHNAWSVRQERR

RNF151

161

Q2KHN1
VENLQKLRRWCRDYR

RSAD2

201

Q8WXG1
YRDSIFRRLWQLQAQ

SYNE4

186

Q8N205
VRNRIGRQAVIYRWN

PTPN14

241

Q15678
VRSAPIRQRYWARNF

SIRT4

96

Q9Y6E7
LLMRRSAYRIRDQIW

SLC9A5

511

Q14940
QCRQLYWRRDLERAL

TAP2

361

Q03519
QYIRRLAAEATEWQR

SRPK1

226

Q96SB4
MESRNLWREVTRYLR

OSBPL10

696

Q9BXB5
DDLNLHYRFLNWRRR

SPRYD3

16

Q8NCJ5
RRRWGYQRARDDTKE

RRS1

141

Q15050
REAFRAYRKWINDRR

PHEX

651

P78562
RVAYQKDRRWRVVTL

SMC4

726

Q9NTJ3
AAARELARQYWLFAR

SH2B3

36

Q9UQQ2
ALRRQWLRDALAVYR

SPTBN4

871

Q9H254
IYLWSRQQRRREARG

TOMM70

56

O94826
RDIDAFWLQRQLSRF

SNRNP200

261

O75643
WRQLDLAQRTLYREV

ZNF550

26

Q7Z398
QDLRLQARRWAETYR

ZMYND10

366

O75800
QARRWAETYRLDVLE

ZMYND10

371

O75800
WVYILFRRAVLRRLQ

TBXA2R

306

P21731
YLENRIWQRDQRDMR

WDR33

66

Q9C0J8
WIAALRRKYRSREQT

PJA1

371

Q8NG27
LREAQYSMLATWRRR

TNFRSF1A

396

P19438
TRLVDRVRLNWQYEE

WWC3

226

Q9ULE0
RVRLNWQYEEARKRV

WWC3

231

Q9ULE0
RYVQRLQWLLSGSRR

VWA3A

936

A6NCI4
EATRIYWSLRTNNRR

KMT2D

5211

O14686
RTWQEEKERVLRYQR

N4BP3

491

O15049