Cluster composition

Functions

CategoryNameIntersectionWithQueryPValueGenesInTermGenesInQueryGenesInTermInQueryID
GeneOntologyMolecularFunctionmolecular adaptor activity

SHANK1 NSD1 SEPTIN11 TLE7 KDM5B SHANK2 SEPTIN10 ZBED1 KDM5A TRIM22 NOTCH1 ITSN2

5.78e-0713563212GO:0060090
GeneOntologyMolecularFunctionsynaptic receptor adaptor activity

SHANK1 SHANK2

1.49e-054322GO:0030160
GeneOntologyMolecularFunctiontranscription coregulator activity

NSD1 TLE7 KDM5B ZBED1 KDM5A TRIM22 NOTCH1

2.46e-05562327GO:0003712
GeneOntologyMolecularFunctionhistone H3K4me/H3K4me2/H3K4me3 demethylase activity

KDM5B KDM5A

3.72e-056322GO:0034647
GeneOntologyMolecularFunctionprotein-macromolecule adaptor activity

SHANK1 NSD1 TLE7 KDM5B SHANK2 ZBED1 KDM5A TRIM22 NOTCH1

6.07e-051160329GO:0030674
GeneOntologyMolecularFunctionhistone H3K4 demethylase activity

KDM5B KDM5A

6.92e-058322GO:0032453
GeneOntologyMolecularFunctionstructural constituent of postsynaptic density

SHANK1 SHANK2

1.36e-0411322GO:0098919
GeneOntologyMolecularFunctionstructural constituent of postsynaptic specialization

SHANK1 SHANK2

1.92e-0413322GO:0098879
GeneOntologyMolecularFunctionminus-end-directed microtubule motor activity

DNAH12 DYNC2H1

3.75e-0418322GO:0008569
GeneOntologyMolecularFunctiontranscription corepressor activity

NSD1 TLE7 KDM5B TRIM22

4.71e-04229324GO:0003714
GeneOntologyMolecularFunctionhistone H3 demethylase activity

KDM5B KDM5A

9.16e-0428322GO:0141052
GeneOntologyMolecularFunctiondynein light intermediate chain binding

DNAH12 DYNC2H1

9.16e-0428322GO:0051959
GeneOntologyMolecularFunctionhistone demethylase activity

KDM5B KDM5A

1.12e-0331322GO:0032452
GeneOntologyMolecularFunctionstructural constituent of postsynapse

SHANK1 SHANK2

1.20e-0332322GO:0099186
GeneOntologyMolecularFunctionprotein demethylase activity

KDM5B KDM5A

1.20e-0332322GO:0140457
GeneOntologyMolecularFunctiontranscription coactivator activity

ZBED1 KDM5A TRIM22 NOTCH1

1.34e-03303324GO:0003713
GeneOntologyMolecularFunctiondynein intermediate chain binding

DNAH12 DYNC2H1

1.60e-0337322GO:0045505
GeneOntologyMolecularFunctionstructural constituent of synapse

SHANK1 SHANK2

2.06e-0342322GO:0098918
GeneOntologyMolecularFunctiondemethylase activity

KDM5B KDM5A

2.26e-0344322GO:0032451
GeneOntologyMolecularFunctionionotropic glutamate receptor binding

SHANK1 SHANK2

3.14e-0352322GO:0035255
GeneOntologyMolecularFunctionsignaling receptor complex adaptor activity

SHANK1 SHANK2

3.38e-0354322GO:0030159
GeneOntologyMolecularFunction2-oxoglutarate-dependent dioxygenase activity

KDM5B KDM5A

4.86e-0365322GO:0016706
GeneOntologyMolecularFunctionmicrotubule motor activity

DNAH12 DYNC2H1

5.61e-0370322GO:0003777
GeneOntologyMolecularFunctionhistone modifying activity

NSD1 KDM5B KDM5A

5.78e-03229323GO:0140993
GeneOntologyCellularComponentpostsynaptic specialization

SHANK1 SEPTIN11 USP6 SHANK2 NOTCH1 FABP5

1.00e-04503326GO:0099572
GeneOntologyCellularComponentneuron to neuron synapse

SHANK1 SEPTIN11 USP6 SHANK2 NOTCH1 FABP5

1.24e-04523326GO:0098984
GeneOntologyCellularComponentglutamatergic synapse

SHANK1 SEPTIN11 USP6 SHANK2 ACAN NOTCH1 FABP5

1.94e-04817327GO:0098978
GeneOntologyCellularComponentseptin complex

SEPTIN11 SEPTIN10

2.04e-0414322GO:0031105
GeneOntologyCellularComponentseptin ring

SEPTIN11 SEPTIN10

2.04e-0414322GO:0005940
GeneOntologyCellularComponentseptin cytoskeleton

SEPTIN11 SEPTIN10

2.69e-0416322GO:0032156
GeneOntologyCellularComponentpostsynaptic density

SHANK1 USP6 SHANK2 NOTCH1 FABP5

5.69e-04451325GO:0014069
GeneOntologyCellularComponentasymmetric synapse

SHANK1 USP6 SHANK2 NOTCH1 FABP5

7.33e-04477325GO:0032279
GeneOntologyCellularComponentpostsynapse

SHANK1 SEPTIN11 USP6 SLC6A11 SHANK2 NOTCH1 FABP5

7.34e-041018327GO:0098794
GeneOntologyCellularComponentSchaffer collateral - CA1 synapse

SHANK1 MAPK9 NOTCH1

1.69e-03155323GO:0098685
GeneOntologyCellularComponentsynaptic membrane

SHANK1 SLC6A11 SHANK2 NOTCH1 ITSN2

1.79e-03583325GO:0097060
GeneOntologyCellularComponentGABA-ergic synapse

SEPTIN11 SLC6A11 ACAN

1.99e-03164323GO:0098982
GeneOntologyCellularComponentpostsynaptic density, intracellular component

USP6 FABP5

2.55e-0349322GO:0099092
GeneOntologyCellularComponentdynein complex

DNAH12 DYNC2H1

3.09e-0354322GO:0030286
GeneOntologyCellularComponentpostsynaptic membrane

SHANK1 SLC6A11 SHANK2 NOTCH1

3.25e-03405324GO:0045211
GeneOntologyCellularComponentpostsynaptic specialization, intracellular component

USP6 FABP5

3.32e-0356322GO:0099091
GeneOntologyCellularComponent9+2 motile cilium

DNAH12 SEPTIN10 DYNC2H1

5.67e-03238323GO:0097729
GeneOntologyCellularComponentdendritic spine

SHANK1 SEPTIN11 SHANK2

5.93e-03242323GO:0043197
GeneOntologyCellularComponentneuron spine

SHANK1 SEPTIN11 SHANK2

6.28e-03247323GO:0044309
GeneOntologyCellularComponentcell division site

SEPTIN11 SEPTIN10

6.66e-0380322GO:0032153
DomainZinc_finger_PHD-type_CS

NSD1 KDM5B TCF19 KDM5A

3.42e-0665304IPR019786
DomainPHD

NSD1 KDM5B TCF19 KDM5A

6.07e-0675304PF00628
DomainZnf_PHD-finger

NSD1 KDM5B TCF19 KDM5A

7.47e-0679304IPR019787
DomainPHD

NSD1 KDM5B TCF19 KDM5A

1.20e-0589304SM00249
DomainZnf_PHD

NSD1 KDM5B TCF19 KDM5A

1.31e-0591304IPR001965
DomainLys_sp_deMease-like_dom

KDM5B KDM5A

1.49e-054302IPR013637
DomainPLU-1

KDM5B KDM5A

1.49e-054302PF08429
DomainZF_PHD_2

NSD1 KDM5B TCF19 KDM5A

1.56e-0595304PS50016
DomainZF_PHD_1

NSD1 KDM5B TCF19 KDM5A

1.62e-0596304PS01359
Domainzf-C5HC2

KDM5B KDM5A

2.49e-055302PF02928
DomainZnf_C5HC2

KDM5B KDM5A

2.49e-055302IPR004198
DomainZnf_FYVE_PHD

NSD1 KDM5B TCF19 KDM5A

8.61e-05147304IPR011011
DomainJmjN

KDM5B KDM5A

1.11e-0410302PF02375
DomainJmjN

KDM5B KDM5A

1.11e-0410302SM00545
DomainJMJN

KDM5B KDM5A

1.11e-0410302PS51183
DomainJmjN

KDM5B KDM5A

1.11e-0410302IPR003349
DomainSeptin

SEPTIN11 SEPTIN10

1.92e-0413302PF00735
DomainG_SEPTIN_dom

SEPTIN11 SEPTIN10

1.92e-0413302IPR030379
DomainG_SEPTIN

SEPTIN11 SEPTIN10

1.92e-0413302PS51719
DomainATPase_dyneun-rel_AAA

DNAH12 DYNC2H1

2.24e-0414302IPR011704
DomainDynein_heavy_chain_D4_dom

DNAH12 DYNC2H1

2.24e-0414302IPR024317
DomainSeptin

SEPTIN11 SEPTIN10

2.24e-0414302IPR016491
DomainDynein_heavy_dom-2

DNAH12 DYNC2H1

2.24e-0414302IPR013602
DomainDHC_N2

DNAH12 DYNC2H1

2.24e-0414302PF08393
DomainAAA_8

DNAH12 DYNC2H1

2.24e-0414302PF12780
DomainAAA_5

DNAH12 DYNC2H1

2.24e-0414302PF07728
DomainDHC_fam

DNAH12 DYNC2H1

2.59e-0415302IPR026983
Domain-

KDM5B KDM5A

2.59e-04153021.10.150.60
DomainARID

KDM5B KDM5A

2.59e-0415302PF01388
DomainDynein_heavy_dom

DNAH12 DYNC2H1

2.59e-0415302IPR004273
DomainBRIGHT

KDM5B KDM5A

2.59e-0415302SM00501
DomainARID_dom

KDM5B KDM5A

2.59e-0415302IPR001606
DomainARID

KDM5B KDM5A

2.59e-0415302PS51011
DomainDynein_heavy

DNAH12 DYNC2H1

2.59e-0415302PF03028
DomainSH3_2

SHANK1 SHANK2 ITSN2

3.50e-0486303IPR011511
DomainSH3_2

SHANK1 SHANK2 ITSN2

3.50e-0486303PF07653
DomainJmjC

KDM5B KDM5A

6.73e-0424302PF02373
Domain-

NSD1 KDM5B TCF19 KDM5A TRIM22

6.81e-044493053.30.40.10
DomainZnf_RING/FYVE/PHD

NSD1 KDM5B TCF19 KDM5A TRIM22

7.52e-04459305IPR013083
Domain-

SEPTIN11 DNAH12 AGAP9 SEPTIN10 DYNC2H1 NOD2

1.04e-037463063.40.50.300
DomainJMJC

KDM5B KDM5A

1.20e-0332302PS51184
DomainJmjC_dom

KDM5B KDM5A

1.20e-0332302IPR003347
DomainJmjC

KDM5B KDM5A

1.28e-0333302SM00558
DomainP-loop_NTPase

SEPTIN11 DNAH12 AGAP9 SEPTIN10 DYNC2H1 NOD2

2.00e-03848306IPR027417
DomainZF_C3H1

ZFC3H1 PARP12

3.90e-0358302PS50103
DomainSH3

SHANK1 SHANK2 ITSN2

4.92e-03216303PS50002
DomainSH3

SHANK1 SHANK2 ITSN2

4.92e-03216303SM00326
DomainSH3_domain

SHANK1 SHANK2 ITSN2

5.18e-03220303IPR001452
DomainSAM_1

SHANK1 SHANK2

5.32e-0368302PF00536
DomainRNaseH-like_dom

ZBED1 POLG

5.47e-0369302IPR012337
Domain-

SHANK1 AGAP9 NOTCH1

7.21e-032483031.25.40.20
DomainAnkyrin_rpt-contain_dom

SHANK1 AGAP9 NOTCH1

7.70e-03254303IPR020683
DomainANK_REP_REGION

SHANK1 AGAP9 NOTCH1

7.70e-03254303PS50297
Pubmed

Variants in TRIM22 That Affect NOD2 Signaling Are Associated With Very-Early-Onset Inflammatory Bowel Disease.

TRIM22 NOD2

8.20e-07232226836588
Pubmed

KDM5 Histone Demethylase Activity Links Cellular Transcriptomic Heterogeneity to Therapeutic Resistance.

KDM5B KDM5A

8.20e-07232230472020
Pubmed

KDM5A and KDM5B histone-demethylases contribute to HU-induced replication stress response and tolerance.

KDM5B KDM5A

8.20e-07232234184733
Pubmed

Meta-analysis of SHANK Mutations in Autism Spectrum Disorders: a gradient of severity in cognitive impairments.

SHANK1 SHANK2

8.20e-07232225188300
Pubmed

TRIM22 inhibits endometrial cancer progression through the NOD2/NF‑κB signaling pathway and confers a favorable prognosis.

TRIM22 NOD2

8.20e-07232232319602
Pubmed

Drawing a line between histone demethylase KDM5A and KDM5B: their roles in development and tumorigenesis.

KDM5B KDM5A

8.20e-07232236509829
Pubmed

KDM5 lysine demethylases are involved in maintenance of 3'UTR length.

KDM5B KDM5A

8.20e-07232228138513
Pubmed

The Shank family of scaffold proteins.

SHANK1 SHANK2

2.46e-06332210806096
Pubmed

Dynamin isoform-specific interaction with the shank/ProSAP scaffolding proteins of the postsynaptic density and actin cytoskeleton.

SHANK1 SHANK2

2.46e-06332211583995
Pubmed

JNK1 Induces Notch1 Expression to Regulate Genes Governing Photoreceptor Production.

MAPK9 NOTCH1

2.46e-06332231450635
Pubmed

Shank, a novel family of postsynaptic density proteins that binds to the NMDA receptor/PSD-95/GKAP complex and cortactin.

SHANK1 SHANK2

2.46e-06332210433268
Pubmed

Coupling of mGluR/Homer and PSD-95 complexes by the Shank family of postsynaptic density proteins.

SHANK1 SHANK2

2.46e-06332210433269
Pubmed

Translational neurobiology in Shank mutant mice--model systems for neuropsychiatric disorders.

SHANK1 SHANK2

2.46e-06332225917711
Pubmed

A dual role for NOTCH signaling in joint cartilage maintenance and osteoarthritis.

ACAN NOTCH1

2.46e-06332226198357
Pubmed

Characterization of a Linked Jumonji Domain of the KDM5/JARID1 Family of Histone H3 Lysine 4 Demethylases.

KDM5B KDM5A

2.46e-06332226645689
Pubmed

Modeling autism by SHANK gene mutations in mice.

SHANK1 SHANK2

2.46e-06332223583105
Pubmed

Mammalian cells express three distinct dynein heavy chains that are localized to different cytoplasmic organelles.

DNAH12 DYNC2H1

2.46e-0633228666668
Pubmed

Histone demethylase KDM5 regulates cardiomyocyte maturation by promoting fatty acid oxidation, oxidative phosphorylation, and myofibrillar organization.

KDM5B KDM5A

2.46e-06332238230606
Pubmed

Re-expression of the retinoblastoma-binding protein 2-homolog 1 reveals tumor-suppressive functions in highly metastatic melanoma cells.

KDM5B KDM5A

2.46e-06332216645588
Pubmed

Dynamic Change of Shanks Gene mRNA Expression and DNA Methylation in Epileptic Rat Model and Human Patients.

SHANK1 SHANK2

2.46e-06332232564287
Pubmed

Intracellular pathogen sensor NOD2 programs macrophages to trigger Notch1 activation.

NOTCH1 NOD2

2.46e-06332221156799
Pubmed

Multiplexed barcoded CRISPR-Cas9 screening enabled by CombiGEM.

NSD1 KDM5B KDM5A

3.79e-063332326864203
Pubmed

Novel JARID1C/SMCX mutations in patients with X-linked mental retardation.

KDM5B KDM5A

4.92e-06432216541399
Pubmed

SHANK3 gene mutations associated with autism facilitate ligand binding to the Shank3 ankyrin repeat region.

SHANK1 SHANK2

4.92e-06432223897824
Pubmed

MiR-34a Promotes Osteogenic Differentiation of Human Adipose-Derived Stem Cells via the RBP2/NOTCH1/CYCLIN D1 Coregulatory Network.

KDM5A NOTCH1

4.92e-06432227453008
Pubmed

The Shank family of postsynaptic density proteins interacts with and promotes synaptic accumulation of the beta PIX guanine nucleotide exchange factor for Rac1 and Cdc42.

SHANK1 SHANK2

4.92e-06432212626503
Pubmed

H3K4 demethylation by Jarid1a and Jarid1b contributes to retinoblastoma-mediated gene silencing during cellular senescence.

KDM5B KDM5A

4.92e-06432222615382
Pubmed

Direct interaction of post-synaptic density-95/Dlg/ZO-1 domain-containing synaptic molecule Shank3 with GluR1 alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionic acid receptor.

SHANK1 SHANK2

8.19e-06532216606358
Pubmed

The insulin receptor substrate IRSp53 links postsynaptic shank1 to the small G-protein cdc42.

SHANK1 SHANK2

8.19e-06532212504591
Pubmed

Identification of proteins interacting with the rat somatostatin receptor subtype 2.

SHANK1 SHANK2

8.19e-06532211087996
Pubmed

Histone lysine demethylase JARID1a activates CLOCK-BMAL1 and influences the circadian clock.

KDM5B KDM5A

1.23e-05632221960634
Pubmed

The calcium-independent receptor for alpha-latrotoxin from human and rodent brains interacts with members of the ProSAP/SSTRIP/Shank family of multidomain proteins.

SHANK1 SHANK2

1.23e-05632210964907
Pubmed

Identification of Jmjd3 as an Essential Epigenetic Regulator of Hox Gene Temporal Collinear Activation for Body Axial Patterning in Mice.

NSD1 KDM5B KDM5A

1.27e-054932334368113
Pubmed

Direct interaction of GluRdelta2 with Shank scaffold proteins in cerebellar Purkinje cells.

SHANK1 SHANK2

1.72e-05732215207857
Pubmed

DNA-binding properties of ARID family proteins.

KDM5B KDM5A

1.72e-05732215640446
Pubmed

New nomenclature for chromatin-modifying enzymes.

NSD1 KDM5B KDM5A

2.00e-055732318022353
Pubmed

The G protein-coupled receptor CL1 interacts directly with proteins of the Shank family.

SHANK1 SHANK2

2.29e-05832210958799
Pubmed

Sex Hormones Regulate SHANK Expression.

SHANK1 SHANK2

2.29e-05832230319350
Pubmed

Behavioral phenotypes of genetic mouse models of autism.

SHANK1 SHANK2

4.49e-051132226403076
Pubmed

Dynamic patterns of histone H3 lysine 4 methyltransferases and demethylases during mouse preimplantation development.

KDM5B KDM5A

6.36e-051332224619213
Pubmed

Identification of dynein heavy chain genes expressed in human and mouse testis: chromosomal localization of an axonemal dynein gene.

DNAH12 DYNC2H1

7.41e-05143229373155
Pubmed

Importance of Shank3 protein in regulating metabotropic glutamate receptor 5 (mGluR5) expression and signaling at synapses.

SHANK1 SHANK2

7.41e-051432221795692
Pubmed

PDZ-Containing Proteins Targeted by the ACE2 Receptor.

SHANK1 SHANK2

8.55e-051532234835087
Pubmed

Extracellular Matrix Disorganization Caused by ADAMTS16 Deficiency Leads to Bicuspid Aortic Valve With Raphe Formation.

ACAN NOTCH1

8.55e-051532238018454
Pubmed

Localization of septin proteins in the mouse cochlea.

SEPTIN11 SEPTIN10

9.76e-051632222575789
Pubmed

Misregulation of an Activity-Dependent Splicing Network as a Common Mechanism Underlying Autism Spectrum Disorders.

SHANK1 DYNC2H1

1.24e-041832227984743
Pubmed

Androglobin, a chimeric mammalian globin, is required for male fertility.

SEPTIN11 SEPTIN10

1.39e-041932235700329
Pubmed

RBPjkappa-dependent Notch signaling regulates mesenchymal progenitor cell proliferation and differentiation during skeletal development.

ACAN NOTCH1

1.39e-041932220335360
Pubmed

The histone demethylase Jarid1b ensures faithful mouse development by protecting developmental genes from aberrant H3K4me3.

KDM5B KDM5A

1.54e-042032223637629
Pubmed

Broad histone H3K4me3 domains in mouse oocytes modulate maternal-to-zygotic transition.

KDM5B KDM5A

1.70e-042132227626377
Pubmed

Ets1 is required for proper migration and differentiation of the cardiac neural crest.

ACAN NOTCH1

1.87e-042232220356956
Pubmed

Netrin 1 directs vascular patterning and maturity in the developing kidney.

UNC5B NOTCH1

2.05e-042332237818607
Pubmed

Molecular reclassification of Crohn's disease by cluster analysis of genetic variants.

DNAH12 NOD2

2.05e-042332220886065
Pubmed

The MYO6 interactome reveals adaptor complexes coordinating early endosome and cytoskeletal dynamics.

SEPTIN11 SEPTIN10 ITSN2

2.08e-0412532329467281
Pubmed

Ablation of vacuole protein sorting 18 (Vps18) gene leads to neurodegeneration and impaired neuronal migration by disrupting multiple vesicle transport pathways to lysosomes.

MAPK9 NOTCH1

2.24e-042432222854957
Pubmed

Notch pathway regulation of chondrocyte differentiation and proliferation during appendicular and axial skeleton development.

ACAN NOTCH1

2.63e-042632219590010
Pubmed

Tbx20 acts upstream of Wnt signaling to regulate endocardial cushion formation and valve remodeling during mouse cardiogenesis.

ACAN NOTCH1

2.84e-042732223824573
Pubmed

Genetic risk profiling and prediction of disease course in Crohn's disease patients.

DNAH12 NOD2

3.05e-042832219422935
Pubmed

The insulin receptor substrate of 53 kDa (IRSp53) limits hippocampal synaptic plasticity.

SHANK1 SHANK2

3.28e-042932219208628
Pubmed

The RNA-mediated estrogen receptor α interactome of hormone-dependent human breast cancer cell nuclei.

NSD1 SEPTIN11 ZFC3H1 SHANK2 KDM5A WDR43 ITSN2

3.52e-04149732731527615
Pubmed

Essential roles for the splicing regulator nSR100/SRRM4 during nervous system development.

SHANK1 DYNC2H1

3.75e-043132225838543
Pubmed

Embryonic arrest at midgestation and disruption of Notch signaling produced by the absence of both epsin 1 and epsin 2 in mice.

NOTCH1 ITSN2

3.75e-043132219666558
Pubmed

A SOX17-PDGFB signaling axis regulates aortic root development.

NOTCH1 FABP5

4.52e-043432235831318
Pubmed

β-Catenin regulates endocardial cushion growth by suppressing p21.

ACAN NOTCH1

4.79e-043532237385754
Pubmed

Retinoic acid receptors are required for skeletal growth, matrix homeostasis and growth plate function in postnatal mouse.

NSD1 ACAN

4.79e-043532219389355
Pubmed

Single-cell transcriptomic analysis of mouse neocortical development.

SLC6A11 DNAH12 TCF19

5.13e-0417032330635555
Pubmed

Myocardial β-Catenin-BMP2 signaling promotes mesenchymal cell proliferation during endocardial cushion formation.

ACAN NOTCH1

5.65e-043832230201295
Pubmed

Control of cardiac jelly dynamics by NOTCH1 and NRG1 defines the building plan for trabeculation.

ACAN NOTCH1

5.65e-043832229743679
Pubmed

A negative genetic interaction map in isogenic cancer cell lines reveals cancer cell vulnerabilities.

KDM5B CARS2 NOTCH1

6.05e-0418032324104479
Pubmed

RONIN Is an Essential Transcriptional Regulator of Genes Required for Mitochondrial Function in the Developing Retina.

NOTCH1 POLG

6.90e-044232226876175
Pubmed

Single-cell profiling of epigenetic modifiers identifies PRDM14 as an inducer of cell fate in the mammalian embryo.

KDM5B KDM5A

7.57e-044432224183668
Pubmed

Multiple mouse chromosomal loci for dynein-based motility.

DNAH12 DYNC2H1

8.64e-04473228812413
Cytoband5q35

NSD1 MAPK9

1.18e-04233225q35
GeneFamilyPHD finger proteins

NSD1 KDM5B TCF19 KDM5A

1.07e-059028488
GeneFamilySeptins

SEPTIN11 SEPTIN10

1.79e-0413282732
GeneFamilyAT-rich interaction domain containing

KDM5B KDM5A

2.40e-0415282418
GeneFamilyAnkyrin repeat domain containing

SHANK1 AGAP9 SHANK2 NOTCH1

4.98e-04242284403
GeneFamilyPHD finger proteins|Lysine demethylases

KDM5B KDM5A

6.25e-0424282485
GeneFamilySterile alpha motif domain containing

SHANK1 SHANK2

8.15e-0388282760
ToppCellBronchial-NucSeq-Stromal-Fibroblastic-Fibro_perichondrial|NucSeq / Cell types per location group and 10X technology with lineage, and cell group designations

SHANK1 SEPTIN11 DYNC2H1 ACAN

1.21e-05199324abd6117f8a3d7e798d8471c16d97b34aaf50fc9c
ToppCellPND07-Immune-Immune_Lymphocytic_T/NK-Lymphocytic_ILC-NK-ILC-ILC_prolif|PND07 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif

TCF19 CARS2 WDR43

1.99e-04159323f7bccfeffa737f151417bf52ea45111b0957bce9
ToppCellfacs-Heart-RA-18m-Endothelial-endothelial_cell_of_endocardium|Heart / Tongue_Heart_Limb_Muscle_Aorta_Diaphragm - method, tissue, subtissue, age, lineage, cell ontology and free annotation

DAO NOTCH1 FABP5

2.34e-0416832306dc5b2d356d3a9454b10bba6f3b9ead2a0a7d46
ToppCellfacs-Heart-RA-18m-Endothelial-endocardial_cell|Heart / Tongue_Heart_Limb_Muscle_Aorta_Diaphragm - method, tissue, subtissue, age, lineage, cell ontology and free annotation

DAO NOTCH1 FABP5

2.34e-041683231002f058a340763e3d8de0bd1f0547a903526ec6
ToppCelldroplet-Marrow-nan-3m-Myeloid-basophil|Marrow / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation

MAPK9 PARP12 NOD2

2.38e-041693235f5bec13208f4c3b6eacbba180c8a6402743b76e
ToppCellT_cells-ISG-high_CD4+_T_cells|T_cells / Immune cells in Kidney/Urine in Lupus Nephritis

RFX8 TRIM22 PARP12

2.82e-04179323af35ef8a7768cee0c2af0590e5bec35cee6a4714
ToppCell3'_v3-lymph-node_spleen-Myeloid_Mac-Cycling_Myeloid-Mac|lymph-node_spleen / Manually curated celltypes from each tissue

SEPTIN11 RWDD2A FABP5

2.96e-0418232384018a84e1aa52fa52ccfc26db9cd1fb6d535b31
ToppCell3'-GW_trimst-2-SmallIntestine-Endothelial-blood_vessel_EC-Fetal_arterial_EC|GW_trimst-2 / Celltypes from developing, pediatric, Crohn's, & adult GI tract

UNC5B NOTCH1 FABP5

2.96e-041823230346f81bbb1f309f3e9d063b20547d548d09472c
ToppCellE12.5-Mesenchymal-developing_mesenchymal_cell-mesenchymal_myogenic_precursor_(Axin2+)|E12.5 / developmental_time, Lineage, Cell group, Cell type, Cell type_cellcyc-phase

SEPTIN11 WDR43 FABP5

3.01e-04183323523896bd1a93bdda81a009768baa3a1bdbd108b8
ToppCell3'_v3-lymph-node_spleen-Myeloid_Mac-Macrophage|lymph-node_spleen / Manually curated celltypes from each tissue

DAO SEPTIN10 FABP5

3.01e-041833230bcbd60e10b9d6898915dab1987fd46dc7238b19
ToppCelldroplet-Marrow-nan-3m|Marrow / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation

NSD1 SEPTIN11 ITSN2

3.06e-041843231154a5ad7b8512272b7476f949ddac350910bfb7
ToppCellNS-moderate-d_16-33-Epithelial-Ciliated|d_16-33 / Location, Severity, dps_group, Lineage and Cell class of Upper airway (combined)

DNAH12 SHANK2 DYNC2H1

3.11e-041853235e689c2fb36ce3ac2adc8d15f67107f21cf68868
ToppCell3'-GW_trimst-1-LargeIntestine-Mesenchymal-Pericytes-Immature_pericyte|GW_trimst-1 / Celltypes from developing, pediatric, Crohn's, & adult GI tract

SEPTIN11 ACAN FABP5

3.16e-04186323db4d9ac89cc1e55062ba888b3410b773340595dd
ToppCelldroplet-Bladder-BLADDER-1m-Epithelial-bladder_urothelial_cell|Bladder / Skin_Bladder_Kidney_Mammary_Gland - method, tissue, subtissue, age, lineage, cell ontology and free annotation

KDM5B NOTCH1 FABP5

3.21e-04187323aa336fb568a24e12c0454265ddd71ed10a6614cf
ToppCell15-Distal-Mesenchymal-Pericyte|Distal / Age, Tissue, Lineage and Cell class

SEPTIN11 ACAN FABP5

3.26e-041883234963382e54aac06bf5047c7d725393db70667ee7
ToppCell10x3'2.3-week_14-16-Mesenchymal_myocytic-stroma-myofibroblast|week_14-16 / cell types per 3 fetal stages;per 3',per 5'

DYNC2H1 ACAN UNC5B

3.26e-04188323116ca07ee4413dcc0e9e5ac99bfee6ed7b7847c6
ToppCellT_cells-ISG-high_CD4+_T_cells|World / Immune cells in Kidney/Urine in Lupus Nephritis

RFX8 TRIM22 PARP12

3.26e-041883236f8946d4710f6e32c937213f99b790b098b8819c
ToppCellfacs-GAT-Fat-24m-Endothelial-nan|GAT / Fat_BAT_GAT_MAT_SCAT - method, tissue, subtissue, age, lineage, cell ontology and free annotation

UNC5B NOTCH1 FABP5

3.36e-04190323da2fcd4a2cc6e45c8174109d892f1424e39919a1
ToppCellfacs-GAT-Fat-24m-Endothelial-endothelial_cell|GAT / Fat_BAT_GAT_MAT_SCAT - method, tissue, subtissue, age, lineage, cell ontology and free annotation

UNC5B NOTCH1 FABP5

3.36e-04190323e584eaccbc22aa7f7a4340ed8a2a8b45ddca93f4
ToppCellfacs-GAT-Fat-24m-Endothelial|GAT / Fat_BAT_GAT_MAT_SCAT - method, tissue, subtissue, age, lineage, cell ontology and free annotation

UNC5B NOTCH1 FABP5

3.36e-041903233395b2ff6ffadf84cdb1b5a37a5b6be05b56c30f
ToppCellfacs-Limb_Muscle-ForelimbandHindlimb-3m-Endothelial|Limb_Muscle / Tongue_Heart_Limb_Muscle_Aorta_Diaphragm - method, tissue, subtissue, age, lineage, cell ontology and free annotation

NOTCH1 FABP5 NOD2

3.36e-04190323bb1476b44dd49e1dd52a636a91c4600b6d4fbe2e
ToppCellfacs-Limb_Muscle-ForelimbandHindlimb-3m-Endothelial-nan|Limb_Muscle / Tongue_Heart_Limb_Muscle_Aorta_Diaphragm - method, tissue, subtissue, age, lineage, cell ontology and free annotation

NOTCH1 FABP5 NOD2

3.36e-04190323d180205c70b5ca9bc5a01a2e6cb42fcebc7f630d
ToppCellfacs-Limb_Muscle-ForelimbandHindlimb-3m-Endothelial-endothelial_cell|Limb_Muscle / Tongue_Heart_Limb_Muscle_Aorta_Diaphragm - method, tissue, subtissue, age, lineage, cell ontology and free annotation

NOTCH1 FABP5 NOD2

3.36e-0419032338a815abf0ac5cac6071737cadc54a514f62d37d
ToppCellfacs-Trachea-3m-Endothelial-endothelial_cell_of_trachea-tracheal_endothelial_cell-tracheal_endothelial_cell_l10|3m / method, tissue, age, lineage, sublineage, cell ontologies, cell type and subtype

NOTCH1 FABP5 NOD2

3.36e-041903232655df8c0883dd811fa7617301f9c4b0a4dd55ec
ToppCell(02)_Cycling_Basal_(regeneration)|World / shred by cell type and Timepoint

TCF19 NOTCH1 FABP5

3.36e-0419032353f017a11ca5ebe9025558e12cedc409cab2e5aa
ToppCell10x3'2.3-week_14-16-Mesenchymal_myocytic|week_14-16 / cell types per 3 fetal stages;per 3',per 5'

DYNC2H1 ACAN UNC5B

3.41e-04191323cc9a6a8fad17d6e1a08a68ab7512ae06b1249051
ToppCell10x3'2.3-week_14-16-Mesenchymal_myocytic-stroma|week_14-16 / cell types per 3 fetal stages;per 3',per 5'

DYNC2H1 ACAN UNC5B

3.41e-04191323c16b920ee69ea8536e020ac3475abf1ce972c1e6
ToppCellsystemic_lupus_erythematosus-managed-Lymphocytic-lymphocyte-male|systemic_lupus_erythematosus / PBMC cell types (v2) per disease, treatment status, and sex

TCF19 RFX8 FABP5

3.41e-0419132356b45259dfc38bd5ea43b0e3adf47e7e2c043a5d
ToppCellIPF-Epithelial-Ciliated|IPF / Disease state, Lineage and Cell class

DNAH12 SHANK2 DYNC2H1

3.46e-04192323354adc1354bf596fbc60dd45c0169688e6f45165
ToppCellfacs-MAT-Fat-24m-Endothelial-nan|MAT / Fat_BAT_GAT_MAT_SCAT - method, tissue, subtissue, age, lineage, cell ontology and free annotation

UNC5B NOTCH1 FABP5

3.52e-04193323ba9a47e2dc01efa6d2a99b1631d4951fac2648d4
ToppCellfacs-MAT-Fat-24m-Endothelial-endothelial_cell|MAT / Fat_BAT_GAT_MAT_SCAT - method, tissue, subtissue, age, lineage, cell ontology and free annotation

UNC5B NOTCH1 FABP5

3.52e-04193323724bb613fa434add5b1c5586b629328f819fbdfe
ToppCellfacs-MAT-Fat-24m-Endothelial|MAT / Fat_BAT_GAT_MAT_SCAT - method, tissue, subtissue, age, lineage, cell ontology and free annotation

UNC5B NOTCH1 FABP5

3.52e-04193323737e540c72a3cfe8dbd4c0f139f7d729a166793a
ToppCellfacs-Skin-Skin_Anagen-18m-Epithelial-nan|Skin / Skin_Bladder_Kidney_Mammary_Gland - method, tissue, subtissue, age, lineage, cell ontology and free annotation

KDM5B SEPTIN10 FABP5

3.52e-04193323bc7e0b6b07be91901f02f1524fb81f3c538ab6b9
ToppCellControl-Epithelial-Ciliated|World / Disease state, Lineage and Cell class

DNAH12 SHANK2 DYNC2H1

3.57e-04194323958e648138676d46698090b4046cb484083ae449
ToppCellIPF-Multiplet-Multiplet|IPF / Disease state, Lineage and Cell class

DNAH12 SHANK2 DYNC2H1

3.62e-04195323fce0c29574bb7aab181b9c00feb42681e285d1f2
ToppCellIPF-Multiplet|IPF / Disease state, Lineage and Cell class

DNAH12 SHANK2 DYNC2H1

3.62e-04195323eacc0449ae6f3ad8002268cd061467684c6fb9a7
ToppCellIPF-Multiplet-Multiplet|World / Disease state, Lineage and Cell class

DNAH12 SHANK2 DYNC2H1

3.62e-0419532321dbdc803c6947024dc2416e9e21c2ef0af9bc31
ToppCell5'-GW_trimst-2-SmallIntestine-Endothelial-blood_vessel_EC-Fetal_arterial_EC|GW_trimst-2 / Celltypes from developing, pediatric, Crohn's, & adult GI tract

UNC5B NOTCH1 FABP5

3.68e-04196323ae46d4b00be92e64e46252dcc156161b171eded4
ToppCellIPF-Epithelial|IPF / Disease state, Lineage and Cell class

DNAH12 SHANK2 DYNC2H1

3.68e-0419632387d9881cfec461a5d89b688a83749b618c519485
ToppCell10x3'2.3-week_14-16-Mesenchymal_osteo-stroma-osteochondral_precursor|week_14-16 / cell types per 3 fetal stages;per 3',per 5'

SEPTIN11 DYNC2H1 UNC5B

3.73e-04197323c165c6fd12dc649b39e920d8528e2eb65c61956b
ToppCell3'-Parenchyma_lung-Epithelial-Airway_ciliated-ciliated_columnar_cell_of_tracheobronchial_tree-Multiciliated_(non-nasal)-Multiciliated_(non-nasal)_L.0.3.2.2|3' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5

DNAH12 SHANK2 DYNC2H1

3.73e-0419732374a2c6cb8fcfe53dd9a2b36492a16c58f38e51c9
ToppCell356C-Myeloid-Macrophage|Myeloid / Donor, Lineage, Cell class and subclass (all cells)

SEPTIN11 PARP12 FABP5

3.73e-04197323896242e1651435bbc5b6521417e1aca36c215acd
ToppCellNon-neuronal-Dividing-Radial_Glia-vRG-20|World / Primary Cells by Cluster

SEPTIN11 NOTCH1 FABP5

3.79e-04198323bce0bc1e3f2257e0f42a1fa6e5b57cf71e4514ba
ToppCell(5)_Epithelial_cells-(5)_Epi_stratified|(5)_Epithelial_cells / Oesophagus cell shreds on cell class (v1) and cell subclass (v1)

UNC5B NOTCH1 FABP5

3.79e-04198323b3aec042912ce53bd86e86b6761a0604d9998ab5
ToppCell10x5'v1-week_14-16-Mesenchymal_osteo-stroma-osteoblast_precursor|week_14-16 / cell types per 3 fetal stages;per 3',per 5'

DYNC2H1 ACAN UNC5B

3.79e-04198323bc9c9f2c87282b5ef8514773e065d2a6b5dde338
ToppCellTracheal-NucSeq-Epithelial-Epi_airway_basal-Suprabasal|NucSeq / Cell types per location group and 10X technology with lineage, and cell group designations

UNC5B NOTCH1 FABP5

3.79e-0419832319d8ff3a4f911b13ecc34844202925475ad4d2ab
ToppCell(1)_T_cell_dividing|World / Spleen cell shreds - cell class (v1) and cell subclass (v1)

TCF19 NOTCH1 FABP5

3.79e-04198323dac3a16e3a070a37f4d0ea37633c23fdc8a9c70a
ToppCell5'-GW_trimst-2-SmallIntestine-Mesenchymal-Pericytes-angiogenic_pericyte|GW_trimst-2 / Celltypes from developing, pediatric, Crohn's, & adult GI tract

SEPTIN11 ACAN FABP5

3.85e-041993239e32644b93fb1c4946dbe388fd5c357304d14e36
ToppCellCV-Moderate-2|CV / Virus stimulation, Condition and Cluster

TCF19 WDR43 FABP5

3.85e-041993232d98424a5247e87f98095c11fb945289092a9d75
ToppCell3'-Parenchyma_lung-Epithelial-Airway_ciliated-ciliated_columnar_cell_of_tracheobronchial_tree-Multiciliated_(non-nasal)-Multiciliated_(non-nasal)_L.0.3.2.0|3' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5

DNAH12 SHANK2 DYNC2H1

3.85e-0419932392fdf6e2f0786ab2ab78126e9131a93794168139
ToppCellTransverse-T_cell-Tfh|T_cell / Region, Cell class and subclass

NSD1 NOTCH1 NOD2

3.85e-0419932333ffea12b8228e0b5bd8942531c3b21d24224725
ToppCellBronchial-10x5prime-Immune_Myeloid-Macrophage_alveolar-Macro_alv_dividing|10x5prime / Cell types per location group and 10X technology with lineage, and cell group designations

SEPTIN11 TCF19 FABP5

3.85e-04199323e1190b1c2d21fed313bb58e24d0e6365de6e6599
ToppCellsevere-Lymphocytic-Prol._cells|severe / Cohort 2 (Rhapsody WB + PBMC) with disease condition, lineage and cell classs

SEPTIN11 TCF19 FABP5

3.85e-04199323b24315952b6ac6c8d2d3a7bd949a5b5392624d4e
ToppCellILEUM-inflamed-(1)_Highly_activated_T_cells|inflamed / shred on tissue, inflammation_status, cell class(v3), cell subclass (v2)

TCF19 NOTCH1 FABP5

3.90e-042003236ff811fdfe49b5b0aea0e88fae80bfaaf40eb7c4
ToppCellFetal_brain-organoid_Tanaka_cellReport-GW10-Macroglial|GW10 / Sample Type, Dataset, Time_group, and Cell type.

DNAH12 NOTCH1 WDR43

3.90e-04200323ef222dc4a205d670172dae74990bdb952ac92e5b
ToppCellFetal_brain-organoid_Tanaka_cellReport-GW10-Macroglial-Astrocyte|GW10 / Sample Type, Dataset, Time_group, and Cell type.

DNAH12 NOTCH1 WDR43

3.90e-0420032398a994692440cb4f505b050276f0c8022c814a21
ToppCellmild|World / Cohort 1 (10x PBMC) with disease condition, cell group and cell class

ZFC3H1 TRIM22 ITSN2

3.90e-0420032312f1685ce8f218433068e090c9d839cd5a1910bf
ToppCellILEUM-inflamed-(1)_T_cell-(1)_Highly_activated_T_cells|(1)_T_cell / shred on tissue, inflammation_status, cell class(v3), cell subclass (v2)

TCF19 NOTCH1 FABP5

3.90e-04200323d92d3bc63a56a604d7b1d49e62d4304e5e4017f2
ComputationalNeighborhood of PTPRC

KDM5A TRIM22 PARP12

2.56e-0468203GNF2_PTPRC
Diseasesyndromic X-linked intellectual disability Claes-Jensen type (implicated_via_orthology)

KDM5B KDM5A

6.83e-064322DOID:0060809 (implicated_via_orthology)
DiseaseAutistic Disorder

SHANK1 NSD1 DAO KDM5B SHANK2

8.63e-06261325C0004352
Diseaseautism spectrum disorder (implicated_via_orthology)

SHANK1 KDM5B SHANK2 KDM5A

2.18e-05152324DOID:0060041 (implicated_via_orthology)
Diseaseintellectual disability (implicated_via_orthology)

KDM5B KDM5A ITSN2

7.42e-0575323DOID:1059 (implicated_via_orthology)
Diseasesyndromic intellectual disability (implicated_via_orthology)

KDM5B KDM5A

1.35e-0416322DOID:0050888 (implicated_via_orthology)
DiseaseBipolar Disorder

SEPTIN11 DAO SHANK2 POLG NOD2

1.52e-04477325C0005586
DiseaseAdenoid Cystic Carcinoma

NSD1 CMTR2 NOTCH1

1.74e-04100323C0010606
Diseasehaptoglobin measurement

TLE7 CMTR2

2.36e-0421322EFO_0004640
DiseaseMental Retardation, Psychosocial

NSD1 SHANK2 KDM5A

4.59e-04139323C0025363
DiseaseProfound Mental Retardation

NSD1 SHANK2 KDM5A

4.59e-04139323C0020796
DiseaseMental deficiency

NSD1 SHANK2 KDM5A

4.59e-04139323C0917816
DiseaseColonic Neoplasms

KDM5B TCF19 NOTCH1

5.96e-04152323C0009375
Diseaseprostate cancer (is_marker_for)

KDM5B KDM5A FABP5

6.42e-04156323DOID:10283 (is_marker_for)
DiseaseMalignant tumor of colon

KDM5B TCF19 NOTCH1

6.79e-04159323C0007102
Diseasealcohol use disorder (implicated_via_orthology)

KDM5B KDM5A NOTCH1

1.22e-03195323DOID:1574 (implicated_via_orthology)
Diseasesitting height ratio

NSD1 ITSN2

1.41e-0351322EFO_0007118
DiseaseInfluenza

TRIM22 PARP12

1.46e-0352322C0021400
DiseaseSquamous cell carcinoma of the head and neck

MAPK9 NOTCH1

1.46e-0352322C1168401
Diseaserenal agenesis, unilateral

KDM5A ACAN

2.00e-0361322MONDO_0019636

Protein segments in the cluster

PeptideGeneStartEntry
NAHCVDCETQNPKWA

AGAP9

521

Q5VTM2
VNAELCTQAWCKFHE

CMTR2

106

Q8IYT2
NHEHVNVSWCFVCSE

NSD1

1701

Q96L73
EWIQAHVQCEGLAEQ

ITSN2

1406

Q9NZM3
NNIQDHNTIWEGCCR

DAO

251

P14920
GCVIFQGTDHIDQWN

MAPK9

221

P45984
WQGQTCEVDINECVL

NOTCH1

861

P46531
EEGTWVCLQNCHLAV

DNAH12

2546

Q6ZR08
CAQDVWATHEVFQQQ

POLG

396

P54098
DGSCNQWFHQVCVGV

KDM5B

1506

Q9UGL1
VCNFTDGALVQHQEW

FABP5

86

Q01469
VQCDGGCDEWFHQVC

KDM5A

1626

P29375
EHCNIDQEVCEEGWN

ACAN

2311

P16112
VDAICQQNFDWRVCG

PARP12

571

Q9H0J9
AGISICEQWVIVCNH

DYNC2H1

286

Q8NCM8
CEQWVIVCNHLTGQV

DYNC2H1

291

Q8NCM8
EIAQCEVFHQCEQWG

CARS2

286

Q9HA77
PWGVVQVENENHCDF

SEPTIN11

256

Q9NVA2
GELCVCAAIQWLQDN

RWDD2A

116

Q9UIY3
VCCKDENGWHEIHQA

SHANK2

291

Q9UPX8
DENGWQEIHQACQRG

SHANK1

311

Q9Y566
QEETVAWVQCDGCDV

TCF19

301

Q9Y242
EHCCWPDVGQEDIFQ

NOD2

351

Q9HC29
GVIQWLVDNFCICEE

RFX8

21

Q6ZV50
ACFHGFVEIWDLQNQ

TLE7

266

A0A1W2PR48
CGHEWNTENCVEFQK

SLC6A11

171

P48066
CNGEWVSQNDHVTQE

UNC5B

81

Q8IZJ1
PWGVVQVENENHCDF

SEPTIN10

281

Q9P0V9
IFCQTGGVEDQEEWH

ZBED1

551

O96006
CWVCELSQEHQGHQT

TRIM22

116

Q8IYM9
TGTCNDDDCQWQHIQ

ZFC3H1

1191

O60293
DQLATCWQAEHCGEV

USP6

486

P35125
DNRVNCIQWHQDSGC

WDR43

126

Q15061