Cluster composition

Functions

CategoryNameIntersectionWithQueryPValueGenesInTermGenesInQueryGenesInTermInQueryID
GeneOntologyMolecularFunctionhelicase activity

ATRX DDX18 MCM3 ZNFX1 CHD2 DDX55 DDX10

2.20e-07158547GO:0004386
GeneOntologyMolecularFunctionATP-dependent activity

ATRX DDX18 MYO18A MCM3 ZNFX1 CHD2 AK9 DDX55 TOP2A DDX10

4.96e-066145410GO:0140657
GeneOntologyMolecularFunctioncatalytic activity, acting on a nucleic acid

ATRX DDX18 MYO18A MCM3 ZNFX1 CHD2 DDX55 NIPBL TOP2A DDX10

7.65e-066455410GO:0140640
GeneOntologyMolecularFunctionATP hydrolysis activity

ATRX DDX18 MYO18A MCM3 CHD2 AK9 DDX55 DDX10

2.27e-05441548GO:0016887
GeneOntologyMolecularFunctionATP-dependent activity, acting on DNA

ATRX MYO18A MCM3 CHD2 TOP2A

2.37e-05127545GO:0008094
GeneOntologyMolecularFunctioncatalytic activity, acting on DNA

ATRX MYO18A MCM3 CHD2 NIPBL TOP2A

7.34e-05262546GO:0140097
GeneOntologyMolecularFunctionchromo shadow domain binding

ATRX NIPBL

1.07e-046542GO:0070087
GeneOntologyMolecularFunctionribonucleoside triphosphate phosphatase activity

ATRX DDX18 MYO18A MCM3 CHD2 AK9 DDX55 DDX10

1.06e-03775548GO:0017111
GeneOntologyMolecularFunctionRNA helicase activity

DDX18 DDX55 DDX10

1.23e-0378543GO:0003724
GeneOntologyMolecularFunctionATP-dependent activity, acting on RNA

DDX18 DDX55 DDX10

1.33e-0380543GO:0008186
GeneOntologyMolecularFunctionpyrophosphatase activity

ATRX DDX18 MYO18A MCM3 CHD2 AK9 DDX55 DDX10

1.76e-03839548GO:0016462
GeneOntologyMolecularFunctionhydrolase activity, acting on acid anhydrides

ATRX DDX18 MYO18A MCM3 CHD2 AK9 DDX55 DDX10

1.77e-03840548GO:0016817
GeneOntologyMolecularFunctionhydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides

ATRX DDX18 MYO18A MCM3 CHD2 AK9 DDX55 DDX10

1.77e-03840548GO:0016818
GeneOntologyMolecularFunctiontranscription regulator inhibitor activity

TAF3 PASD1

4.26e-0336542GO:0140416
GeneOntologyMolecularFunctionATP-dependent chromatin remodeler activity

ATRX CHD2

4.50e-0337542GO:0140658
GeneOntologyBiologicalProcessribosome biogenesis

WDR3 GTF3A DDX18 NAT10 UTP20 MPHOSPH10 PAK1IP1 SDAD1 ESF1 DDX10

8.14e-093365110GO:0042254
GeneOntologyBiologicalProcessrRNA metabolic process

WDR3 GTF3A DDX18 NAT10 UTP20 MPHOSPH10 ESF1 DDX10

3.50e-07275518GO:0016072
GeneOntologyBiologicalProcessribonucleoprotein complex biogenesis

WDR3 GTF3A DDX18 NAT10 UTP20 MPHOSPH10 PAK1IP1 SDAD1 ESF1 DDX10

4.40e-075155110GO:0022613
GeneOntologyBiologicalProcessrRNA processing

WDR3 DDX18 NAT10 UTP20 MPHOSPH10 ESF1 DDX10

1.49e-06230517GO:0006364
GeneOntologyBiologicalProcessmaturation of SSU-rRNA

WDR3 NAT10 UTP20 MPHOSPH10

1.03e-0555514GO:0030490
GeneOntologyBiologicalProcessprotein-DNA complex organization

TAF3 ATRX UBR5 BAZ2A BRPF1 ZNFX1 CHD2 SSRP1 TNP2 NIPBL LRIF1

2.61e-059995111GO:0071824
GeneOntologyBiologicalProcessribosomal large subunit biogenesis

GTF3A DDX18 PAK1IP1 SDAD1

3.18e-0573514GO:0042273
GeneOntologyBiologicalProcessheterochromatin formation

ATRX UBR5 BAZ2A ZNFX1 LRIF1

5.08e-05163515GO:0031507
GeneOntologyBiologicalProcesschromatin organization

ATRX UBR5 BAZ2A BRPF1 ZNFX1 CHD2 SSRP1 TNP2 NIPBL LRIF1

5.75e-058965110GO:0006325
GeneOntologyBiologicalProcesschromatin remodeling

ATRX UBR5 BAZ2A BRPF1 ZNFX1 CHD2 SSRP1 NIPBL LRIF1

7.46e-05741519GO:0006338
GeneOntologyBiologicalProcessnegative regulation of gene expression, epigenetic

ATRX UBR5 BAZ2A ZNFX1 LRIF1

1.43e-04203515GO:0045814
GeneOntologyBiologicalProcessribosomal small subunit biogenesis

WDR3 NAT10 UTP20 MPHOSPH10

1.47e-04108514GO:0042274
GeneOntologyBiologicalProcessmaintenance of mitotic sister chromatid cohesion

ATRX NIPBL

4.59e-0413512GO:0034088
GeneOntologyBiologicalProcessmeiotic cell cycle process

WASH6P ATRX PLCB1 MCM3 TOP2A

5.14e-04268515GO:1903046
GeneOntologyBiologicalProcessmaintenance of sister chromatid cohesion

ATRX NIPBL

5.35e-0414512GO:0034086
GeneOntologyCellularComponentnuclear protein-containing complex

WDR3 TAF3 BAZ2A NAT10 MCM3 ZNFX1 XPA ATF4 MPHOSPH10 PRKRIP1 SSRP1 CWC25 NIPBL LARP7 PASD1

1.33e-0613775415GO:0140513
GeneOntologyCellularComponentsmall-subunit processome

WDR3 NAT10 UTP20 MPHOSPH10

4.44e-0576544GO:0032040
GeneOntologyCellularComponent90S preribosome

WDR3 UTP20 MPHOSPH10

5.68e-0529543GO:0030686
GeneOntologyCellularComponentsperm head

SCAPER PCDH11X PMFBP1

6.30e-0530543GO:0061827
GeneOntologyCellularComponentpreribosome

WDR3 NAT10 UTP20 MPHOSPH10

2.15e-04114544GO:0030684
GeneOntologyCellularComponentnuclear chromosome

ATRX MCM3 XPA LRIF1 TOP2A

4.95e-04254545GO:0000228
GeneOntologyCellularComponentmicrotubule organizing center

CCDC170 WASH6P TTLL6 MYO18A MCM3 ATF4 AGBL2 LRIF1 TOP2A

5.28e-04919549GO:0005815
GeneOntologyCellularComponentnuclear speck

BAZ2A SCAPER PLCB1 ATF4 CWC25 PASD1

8.30e-04431546GO:0016607
GeneOntologyCellularComponentchromosome, telomeric region

ATRX NAT10 MCM3 LRIF1

1.11e-03176544GO:0000781
GeneOntologyCellularComponentmale germ cell nucleus

TAF3 TNP2 TOP2A

1.43e-0386543GO:0001673
GeneOntologyCellularComponentnuclear replisome

MCM3 XPA

1.60e-0323542GO:0043601
GeneOntologyCellularComponentreplisome

MCM3 XPA

1.89e-0325542GO:0030894
GeneOntologyCellularComponentcilium

CCDC170 RSPH10B2 TTLL6 GRK4 PCDH11X AGBL2 RSPH10B PMFBP1

2.02e-03898548GO:0005929
GeneOntologyCellularComponentgerm cell nucleus

TAF3 TNP2 TOP2A

3.12e-03113543GO:0043073
GeneOntologyCellularComponentribonucleoprotein complex

WDR3 NAT10 SRP14 UTP20 MPHOSPH10 PRKRIP1 CWC25 TOP2A LARP7

3.26e-031194549GO:1990904
GeneOntologyCellularComponent9+2 motile cilium

RSPH10B2 PCDH11X RSPH10B PMFBP1

3.32e-03238544GO:0097729
GeneOntologyCellularComponentRNA polymerase complex

TAF3 MCM3 ZNFX1

3.61e-03119543GO:0030880
GeneOntologyCellularComponentchromatin

ATRX UBR5 BAZ2A BRPF1 PLCB1 CHD2 ATF4 SSRP1 TNP2 NIPBL

4.18e-0314805410GO:0000785
GeneOntologyCellularComponentchromosomal region

ATRX NAT10 MCM3 LRIF1 TOP2A

4.55e-03421545GO:0098687
GeneOntologyCellularComponentnuclear replication fork

MCM3 XPA

5.28e-0342542GO:0043596
GeneOntologyCellularComponentnuclear body

ATRX BAZ2A SCAPER PLCB1 ATF4 CWC25 PASD1

8.28e-03903547GO:0016604
MousePhenoabnormal fetal growth/weight/body size

MCM3 CHD2 XPA ATF4 PAK1IP1 NIPBL LARP7

3.02e-05312417MP:0004197
MousePhenodecreased fetal size

MCM3 CHD2 ATF4 PAK1IP1 NIPBL LARP7

5.04e-05229416MP:0004200
MousePhenoabnormal fetal size

MCM3 CHD2 ATF4 PAK1IP1 NIPBL LARP7

6.10e-05237416MP:0004198
DomainDUF4217

DDX18 DDX55 DDX10

7.21e-084503PF13959
DomainDUF4217

DDX18 DDX55 DDX10

7.21e-084503SM01178
DomainDUF4217

DDX18 DDX55 DDX10

7.21e-084503IPR025313
DomainHelicase_C

ATRX DDX18 CHD2 DDX55 DDX10

9.69e-06107505PF00271
DomainHELICc

ATRX DDX18 CHD2 DDX55 DDX10

9.69e-06107505SM00490
DomainHelicase_C

ATRX DDX18 CHD2 DDX55 DDX10

1.01e-05108505IPR001650
DomainHELICASE_CTER

ATRX DDX18 CHD2 DDX55 DDX10

1.06e-05109505PS51194
DomainHELICASE_ATP_BIND_1

ATRX DDX18 CHD2 DDX55 DDX10

1.06e-05109505PS51192
DomainDEXDc

ATRX DDX18 CHD2 DDX55 DDX10

1.06e-05109505SM00487
DomainHelicase_ATP-bd

ATRX DDX18 CHD2 DDX55 DDX10

1.11e-05110505IPR014001
DomainP-loop_NTPase

LRRIQ1 ATRX DDX18 MYO18A MCM3 ZNFX1 CHD2 AK9 DDX55 DDX10

6.94e-058485010IPR027417
DomainDEAD_ATP_HELICASE

DDX18 DDX55 DDX10

7.70e-0531503PS00039
DomainRNA-helicase_DEAD-box_CS

DDX18 DDX55 DDX10

9.31e-0533503IPR000629
DomainZF_PHD_2

TAF3 ATRX BAZ2A BRPF1

1.21e-0495504PS50016
DomainZF_PHD_1

TAF3 ATRX BAZ2A BRPF1

1.26e-0496504PS01359
DomainQ_MOTIF

DDX18 DDX55 DDX10

1.32e-0437503PS51195
DomainRNA_helicase_DEAD_Q_motif

DDX18 DDX55 DDX10

1.32e-0437503IPR014014
Domain-

ATRX DDX18 MYO18A MCM3 ZNFX1 CHD2 AK9 DDX55 DDX10

1.42e-047465093.40.50.300
Domain-

PDZRN3 PDZRN4

6.26e-04145023.90.890.10
DomainZnf_FYVE_PHD

TAF3 ATRX BAZ2A BRPF1

6.40e-04147504IPR011011
DomainSIAH-type

PDZRN3 PDZRN4

8.23e-0416502IPR013323
DomainDEAD/DEAH_box_helicase_dom

DDX18 DDX55 DDX10

9.84e-0473503IPR011545
DomainDEAD

DDX18 DDX55 DDX10

9.84e-0473503PF00270
Domain-

TAF3 ATRX BAZ2A BRPF1 PDZRN3 PDZRN4

1.21e-034495063.30.40.10
DomainZnf_PHD-finger

TAF3 BAZ2A BRPF1

1.24e-0379503IPR019787
DomainZnf_RING/FYVE/PHD

TAF3 ATRX BAZ2A BRPF1 PDZRN3 PDZRN4

1.36e-03459506IPR013083
DomainPHD

TAF3 BAZ2A BRPF1

1.74e-0389503SM00249
DomainZnf_PHD

TAF3 BAZ2A BRPF1

1.86e-0391503IPR001965
DomainTRAF-like

PDZRN3 PDZRN4

1.87e-0324502IPR008974
DomainBromodomain_CS

BAZ2A BRPF1

2.19e-0326502IPR018359
DomainSNF2_N

ATRX CHD2

3.31e-0332502IPR000330
DomainSNF2_N

ATRX CHD2

3.31e-0332502PF00176
DomainBROMODOMAIN_1

BAZ2A BRPF1

4.41e-0337502PS00633
DomainBromodomain

BAZ2A BRPF1

4.64e-0338502PF00439
PathwayREACTOME_RRNA_MODIFICATION_IN_THE_NUCLEUS_AND_CYTOSOL

WDR3 NAT10 UTP20 MPHOSPH10

1.11e-0560334M27613
PathwayKEGG_MEDICUS_REFERENCE_COHESIN_LOADING

ATRX NIPBL

1.89e-049332M47868
Pubmed

The ubiquitin-specific protease USP36 SUMOylates EXOSC10 and promotes the nucleolar RNA exosome function in rRNA processing.

WDR3 DDX18 NAT10 SRP14 UTP20 MPHOSPH10 PAK1IP1 SSRP1 DDX55 TOP2A SDAD1 LARP7 ESF1 KNOP1 DDX10

7.95e-16483551536912080
Pubmed

Reciprocal interaction between SIRT6 and APC/C regulates genomic stability.

WDR3 ATRX UBR5 DDX18 NAT10 SRP14 MCM3 MPHOSPH10 PAK1IP1 SSRP1 DDX55 TOP2A SDAD1 ESF1

5.95e-15440551434244565
Pubmed

The E3 ubiquitin ligase HECTD1 contributes to cell proliferation through an effect on mitosis.

WDR3 DDX18 NAT10 SCAPER MYO18A UTP20 MPHOSPH10 PAK1IP1 SSRP1 DDX55 TOP2A SDAD1 LARP7 ESF1 KNOP1 DDX10

3.05e-14759551635915203
Pubmed

Nucleolar proteome dynamics.

WDR3 ATRX SRP14 MCM3 UTP20 MPHOSPH10 SSRP1 DDX55 NIPBL TOP2A SDAD1 ESF1 DDX10

8.59e-14419551315635413
Pubmed

Interactions of the Antiviral Factor Interferon Gamma-Inducible Protein 16 (IFI16) Mediate Immune Signaling and Herpes Simplex Virus-1 Immunosuppression.

WDR3 BAZ2A DDX18 NAT10 UTP20 MPHOSPH10 PAK1IP1 SSRP1 TOP2A LARP7 ESF1 DDX10

1.43e-13332551225693804
Pubmed

BAP1 regulation of the key adaptor protein NCoR1 is critical for γ-globin gene repression.

WDR3 TAF3 BAZ2A CCDC47 DDX18 NAT10 SRP14 MCM3 CHD2 MPHOSPH10 PAK1IP1 SSRP1 NIPBL LRIF1 TOP2A LARP7 KNOP1 DDX10

8.83e-131318551830463901
Pubmed

The Nse5/6-like SIMC1-SLF2 complex localizes SMC5/6 to viral replication centers.

WDR3 TAF3 ATRX BAZ2A DDX18 NAT10 SRP14 MCM3 MPHOSPH10 SSRP1 CWC25 NIPBL TOP2A ESF1 KNOP1 DDX10

9.92e-13954551636373674
Pubmed

HDLBP Promotes Hepatocellular Carcinoma Proliferation and Sorafenib Resistance by Suppressing Trim71-dependent RAF1 Degradation.

WDR3 TAF3 CCDC47 DDX18 SEC62 NAT10 SRP14 TNRC6B CHD2 PAK1IP1 PRKRIP1 SSRP1 DDX55 CWC25 SDAD1 LARP7 KNOP1 DDX10

1.71e-121371551836244648
Pubmed

Synthetic Lethal and Resistance Interactions with BET Bromodomain Inhibitors in Triple-Negative Breast Cancer.

WDR3 TAF3 ATRX UBR5 DDX18 NAT10 SRP14 MCM3 CHD2 XPA PAK1IP1 SSRP1 NIPBL TOP2A LARP7 ESF1

2.49e-121014551632416067
Pubmed

The functional interactome of PYHIN immune regulators reveals IFIX is a sensor of viral DNA.

WDR3 ATRX BAZ2A DDX18 NAT10 UTP20 MPHOSPH10 PAK1IP1 LARP7 KNOP1 DDX10

7.16e-12349551125665578
Pubmed

The in vivo Interaction Landscape of Histones H3.1 and H3.3.

TAF3 ATRX BAZ2A BRPF1 NAT10 CHD2 SSRP1 DDX55 NIPBL LRIF1 TOP2A KNOP1 DDX10

9.30e-12608551336089195
Pubmed

Gain of Additional BIRC3 Protein Functions through 3'-UTR-Mediated Protein Complex Formation.

WDR3 ATRX CCDC47 DDX18 NAT10 SRP14 MCM3 UTP20 PAK1IP1 SSRP1 DDX55 NIPBL TOP2A SDAD1 LARP7 ESF1 DDX10

3.67e-111425551730948266
Pubmed

Combinatorial targeting of a chromatin complex comprising Dot1L, menin and the tyrosine kinase BAZ1B reveals a new therapeutic vulnerability of endocrine therapy-resistant breast cancer.

WDR3 BRPF1 DDX18 NAT10 SRP14 UTP20 MPHOSPH10 PAK1IP1 SSRP1 DDX55 TOP2A SDAD1 LARP7 KNOP1

4.01e-11847551435850772
Pubmed

The RNA-mediated estrogen receptor α interactome of hormone-dependent human breast cancer cell nuclei.

WDR3 ATRX BAZ2A CCDC47 TNRC6B UTP20 CHD2 MPHOSPH10 PAK1IP1 SSRP1 DDX55 NIPBL SDAD1 LARP7 ESF1 KNOP1 DDX10

7.88e-111497551731527615
Pubmed

HIV-1 Vpr induces cell cycle arrest and enhances viral gene expression by depleting CCDC137.

ATRX NAT10 MPHOSPH10 TOP2A SDAD1 ESF1 KNOP1 DDX10

9.13e-1114855832538781
Pubmed

Interactome Analysis of the Nucleocapsid Protein of SARS-CoV-2 Virus.

WDR3 DDX18 NAT10 MPHOSPH10 PAK1IP1 LARP7 ESF1 KNOP1

1.62e-1015955834578187
Pubmed

FOXA1 Directs H3K4 Monomethylation at Enhancers via Recruitment of the Methyltransferase MLL3.

MCM3 UTP20 MPHOSPH10 PAK1IP1 SSRP1 DDX55 TOP2A SDAD1 ESF1

1.97e-1024855927926873
Pubmed

Human Antiviral Protein IFIX Suppresses Viral Gene Expression during Herpes Simplex Virus 1 (HSV-1) Infection and Is Counteracted by Virus-induced Proteasomal Degradation.

ATRX UBR5 BAZ2A SRP14 MPHOSPH10 SSRP1 TOP2A SDAD1 LARP7

2.19e-1025155928077445
Pubmed

The mRNA-bound proteome and its global occupancy profile on protein-coding transcripts.

DDX18 NAT10 MYO18A SRP14 UTP20 ZNFX1 CHD2 MPHOSPH10 SSRP1 TOP2A LARP7 ESF1 DDX10

3.04e-10807551322681889
Pubmed

Functional proteomics establishes the interaction of SIRT7 with chromatin remodeling complexes and expands its role in regulation of RNA polymerase I transcription.

WDR3 UBR5 BAZ2A DDX18 NAT10 UTP20 CHD2 MPHOSPH10 NIPBL LARP7 ESF1 DDX10

3.65e-10653551222586326
Pubmed

MECP2 directly interacts with RNA polymerase II to modulate transcription in human neurons.

TAF3 DDX18 NAT10 MYO18A SRP14 TNRC6B MCM3 CHD2 PAK1IP1 SSRP1 DDX55 NIPBL SDAD1 KNOP1

9.71e-101082551438697112
Pubmed

Systematic bromodomain protein screens identify homologous recombination and R-loop suppression pathways involved in genome integrity.

TAF3 UBR5 BAZ2A BRPF1 DDX18 NAT10 SCAPER SRP14 TNRC6B SSRP1 PDZRN3 TOP2A LARP7 KNOP1

1.44e-091116551431753913
Pubmed

Proteomic profiling of VCP substrates links VCP to K6-linked ubiquitylation and c-Myc function.

WDR3 UBR5 BAZ2A CCDC47 DDX18 NAT10 SRP14 MCM3 UTP20 CHD2 SSRP1 NIPBL TOP2A ESF1 DDX10

1.80e-091353551529467282
Pubmed

TBK1 phosphorylation activates LIR-dependent degradation of the inflammation repressor TNIP1.

WDR3 DDX18 NAT10 MYO18A SRP14 MCM3 UTP20 MPHOSPH10 PAK1IP1 SSRP1 DDX55 TOP2A DDX10

2.15e-09949551336574265
Pubmed

CHD3 and CHD4 form distinct NuRD complexes with different yet overlapping functionality.

WDR3 DDX18 NAT10 MCM3 SSRP1 DDX55 TOP2A SDAD1 LARP7 KNOP1 DDX10

2.41e-09605551128977666
Pubmed

Large-scale characterization of HeLa cell nuclear phosphoproteins.

TAF3 ATRX BAZ2A BRPF1 MYO18A MCM3 UTP20 PAK1IP1 SSRP1 NIPBL TOP2A ESF1

2.48e-09774551215302935
Pubmed

MYC multimers shield stalled replication forks from RNA polymerase.

WDR3 DDX18 NAT10 SRP14 MCM3 UTP20 MPHOSPH10 PAK1IP1 SSRP1 TOP2A SDAD1 ESF1 DDX10

3.53e-09989551336424410
Pubmed

Targeting USP10 induces degradation of oncogenic ANLN in esophageal squamous cell carcinoma.

WDR3 DDX18 NAT10 MYO18A MCM3 UTP20 MPHOSPH10 PAK1IP1 SSRP1 DDX55 TOP2A SDAD1 ESF1 KNOP1

6.58e-091257551436526897
Pubmed

The cell proliferation antigen Ki-67 organises heterochromatin.

WDR3 BAZ2A MCM3 UTP20 MPHOSPH10 PAK1IP1 NIPBL SDAD1 KNOP1

1.59e-0841055926949251
Pubmed

In-Depth In Vivo Crosslinking in Minutes by a Compact, Membrane-Permeable, and Alkynyl-Enrichable Crosslinker.

ATRX CCDC47 SEC62 MYO18A SRP14 CHD2 MPHOSPH10 SSRP1 DDX55 NIPBL TOP2A LARP7 ESF1 KNOP1

3.68e-081442551435575683
Pubmed

Receptor-mediated clustering of FIP200 bypasses the role of LC3 lipidation in autophagy.

WDR3 GTF3A SRP14 UTP20 PAK1IP1 DDX55 TOP2A SDAD1 DDX10

3.80e-0845455933226137
Pubmed

Directed proteomic analysis of the human nucleolus.

WDR3 SRP14 UTP20 MPHOSPH10 TOP2A SDAD1 DDX10

3.94e-0820855711790298
Pubmed

H4K20me0 recognition by BRCA1-BARD1 directs homologous recombination to sister chromatids.

WDR3 ATRX BAZ2A DDX18 NAT10 SRP14 UTP20 CHD2 SSRP1 NIPBL LRIF1 TOP2A KNOP1

8.35e-081294551330804502
Pubmed

Interactome Rewiring Following Pharmacological Targeting of BET Bromodomains.

TAF3 ATRX DDX18 NAT10 CHD2 SSRP1 NIPBL TOP2A DDX10

1.48e-0753355930554943
Pubmed

Characterizing ZC3H18, a Multi-domain Protein at the Interface of RNA Production and Destruction Decisions.

WDR3 DDX18 NAT10 SRP14 PAK1IP1 SSRP1 DDX55 TOP2A KNOP1 DDX10

1.97e-07731551029298432
Pubmed

Unbiased Identification of trans Regulators of ADAR and A-to-I RNA Editing.

WDR3 NAT10 SSRP1 DDX55 TOP2A KNOP1 DDX10

2.38e-0727155732433965
Pubmed

The histone acetyltransferase KAT6A is recruited to unmethylated CpG islands via a DNA binding winged helix domain.

TAF3 ATRX CCDC47 NAT10 MPHOSPH10 TOP2A ESF1 KNOP1

2.97e-0741755836537216
Pubmed

Mapping the Ku Interactome Using Proximity-Dependent Biotin Identification in Human Cells.

ATRX BAZ2A NAT10 SSRP1 TOP2A ESF1 DDX10

3.19e-0728355730585729
Pubmed

TRIM28-mediated nucleocapsid protein SUMOylation enhances SARS-CoV-2 virulence.

WDR3 DDX18 NAT10 TNRC6B MPHOSPH10 SSRP1 TOP2A DDX10

3.75e-0743055838172120
Pubmed

Comprehensive interactome profiling of the human Hsp70 network highlights functional differentiation of J domains.

WDR3 ATRX UBR5 BAZ2A CCDC47 DDX18 NAT10 MYO18A SRP14 SSRP1 LARP7 ESF1 DDX10

4.10e-071487551333957083
Pubmed

Functional proteomic analysis of human nucleolus.

WDR3 NAT10 UTP20 MPHOSPH10 PAK1IP1

7.37e-0710655512429849
Pubmed

Phosphoproteome analysis of the human mitotic spindle.

WDR3 UBR5 UTP20 NIPBL TOP2A ESF1

1.02e-0621055616565220
Pubmed

SRCAP complex promotes lung cancer progression by reprograming the oncogenic transcription of Hippo-YAP/TAZ signaling pathway.

TAF3 BAZ2A NAT10 TNRC6B MCM3 SSRP1 TOP2A ESF1

2.32e-0654955838280479
Pubmed

PROTAC-mediated degradation reveals a non-catalytic function of AURORA-A kinase.

UBR5 TNRC6B ZNFX1 MPHOSPH10 SDAD1 KNOP1

2.62e-0624755632989298
Pubmed

Nucleolar maturation of the human small subunit processome.

WDR3 NAT10 UTP20 MPHOSPH10

2.92e-066255434516797
Pubmed

Identifying biological pathways that underlie primordial short stature using network analysis.

WDR3 UBR5 DDX18 NAT10 MCM3 UTP20 SSRP1 NIPBL TOP2A DDX10

4.12e-061024551024711643
Pubmed

RioK1, a new interactor of protein arginine methyltransferase 5 (PRMT5), competes with pICln for binding and modulates PRMT5 complex composition and substrate specificity.

NAT10 SRP14 MCM3 ZNFX1 DDX55 SDAD1 ESF1

4.74e-0642555721081503
Pubmed

The Epigenetic Factor Landscape of Developing Neocortex Is Regulated by Transcription Factors Pax6→ Tbr2→ Tbr1.

ATRX BAZ2A BRPF1 CHD2 SSRP1

5.10e-0615755530186101
Pubmed

WWP2 ubiquitylates RNA polymerase II for DNA-PK-dependent transcription arrest and repair at DNA breaks.

DDX18 NAT10 SRP14 MPHOSPH10 SSRP1 TOP2A SDAD1 LARP7

5.35e-0661555831048545
Pubmed

A bead-based approach for large-scale identification of in vitro kinase substrates.

MCM3 MPHOSPH10 SSRP1 TOP2A LARP7

6.12e-0616355522113938
Pubmed

CBFβ stabilizes HIV Vif to counteract APOBEC3 at the expense of RUNX1 target gene expression.

TXLNB BAZ2A PLCB1 PMFBP1 KNOP1

6.12e-0616355523333304
Pubmed

Identification and characterization of PDZRN3 and PDZRN4 genes in silico.

PDZRN3 PDZRN4

7.36e-06355215010864
Pubmed

BAZ2A-RNA mediated association with TOP2A and KDM1A represses genes implicated in prostate cancer.

BAZ2A TOP2A

7.36e-06355237184661
Pubmed

A genome-wide association study for irinotecan-related severe toxicities in patients with advanced non-small-cell lung cancer.

PLCB1 PDZRN3

7.36e-06355222664479
Pubmed

Proteomic characterization of chromosomal common fragile site (CFS)-associated proteins uncovers ATRX as a regulator of CFS stability.

ATRX DDX18 NAT10 SRP14 MCM3 NIPBL LRIF1 TOP2A

8.19e-0665255831180492
Pubmed

ZZW-115-dependent inhibition of NUPR1 nuclear translocation sensitizes cancer cells to genotoxic agents.

WDR3 DDX18 NAT10 MYO18A SRP14 MCM3 PAK1IP1 TOP2A

8.95e-0666055832780723
Pubmed

ATRX promotes heterochromatin formation to protect cells from G-quadruplex DNA-mediated stress.

ATRX MCM3 SSRP1

9.48e-062655334162889
Pubmed

STING-Mediated IFI16 Degradation Negatively Controls Type I Interferon Production.

DDX18 NAT10 DDX55 SDAD1 KNOP1 DDX10

1.07e-0531655631665637
Pubmed

The ubiquitin ligase Uhrf2 is a master regulator of cholesterol biosynthesis and is essential for liver regeneration.

ATRX NAT10 NIPBL TOP2A

1.08e-058655437253089
Pubmed

PTPN14 regulates Roquin2 stability by tyrosine dephosphorylation.

WDR3 DDX18 NAT10 SRP14 TNRC6B MPHOSPH10 DDX55 SDAD1

1.09e-0567855830209976
Pubmed

Human transcription factor protein interaction networks.

FHAD1 TAF3 ATRX DDX18 NAT10 MYO18A TNRC6B NIPBL LRIF1 SDAD1 DDX10

1.23e-051429551135140242
Pubmed

LOXL2 Upregulates Phosphorylation of Ezrin to Promote Cytoskeletal Reorganization and Tumor Cell Invasion.

NAT10 MYO18A SRP14 MCM3 SSRP1 TOP2A

1.30e-0532755631409639
Pubmed

ZBTB2 protein is a new partner of the Nucleosome Remodeling and Deacetylase (NuRD) complex.

BAZ2A DDX18 NAT10 SSRP1 TOP2A DDX10

1.37e-0533055633301849
Pubmed

KAP1 facilitates reinstatement of heterochromatin after DNA replication.

UBR5 CCDC47 MCM3 UTP20 PAK1IP1 SSRP1 NIPBL TOP2A

1.43e-0570455829955894
Pubmed

In vitro nuclear interactome of the HIV-1 Tat protein.

DDX18 NAT10 MCM3 SSRP1 TOP2A

1.46e-0519555519454010
Pubmed

N-Terminal Acetyltransferase Naa40p Whereabouts Put into N-Terminal Proteoform Perspective.

ATRX BAZ2A NAT10 TNRC6B NIPBL TOP2A ESF1 KNOP1 DDX10

1.47e-0593455933916271
Pubmed

RNA-binding proteins with basic-acidic dipeptide (BAD) domains self-assemble and aggregate in Alzheimer's disease.

DDX18 SRP14 MPHOSPH10 PAK1IP1 TOP2A SDAD1 LARP7 KNOP1

1.56e-0571355829802200
Pubmed

MYC Protein Interactome Profiling Reveals Functionally Distinct Regions that Cooperate to Drive Tumorigenesis.

DDX18 NAT10 SRP14 SSRP1 LRIF1 DDX10

1.59e-0533955630415952
Pubmed

Genome-wide CRISPR-Cas9 Screen Identifies Leukemia-Specific Dependence on a Pre-mRNA Metabolic Pathway Regulated by DCPS.

NAT10 SRP14 UTP20 NIPBL LRIF1 TOP2A

1.62e-0534055629478914
Pubmed

Mixed Lineage Leukemia 5 (MLL5) Protein Stability Is Cooperatively Regulated by O-GlcNac Transferase (OGT) and Ubiquitin Specific Protease 7 (USP7).

DDX18 MCM3 TOP2A

1.63e-053155326678539
Pubmed

A Degradation Motif in STAU1 Defines a Novel Family of Proteins Involved in Inflammation.

BRPF1 DDX18 NAT10 MYO18A TNRC6B MPHOSPH10 DDX55 DDX10

1.74e-0572455836232890
Pubmed

Comparative Interactomes of VRK1 and VRK3 with Their Distinct Roles in the Cell Cycle of Liver Cancer.

DDX18 SCAPER SRP14 SSRP1 TOP2A

1.86e-0520555528927264
Pubmed

UPR-induced resistance to etoposide is downstream of PERK and independent of changes in topoisomerase IIα levels.

ATF4 TOP2A

2.45e-05555223144714
Pubmed

The deubiquitinase USP7 stabilizes Maf proteins to promote myeloma cell survival.

DDX18 NAT10 DDX55 LARP7 KNOP1

2.60e-0522055531822558
Pubmed

Comprehensive Interactome Mapping of the DNA Repair Scaffold SLX4 Using Proximity Labeling and Affinity Purification.

ATRX DDX18 NIPBL LRIF1 ESF1

2.72e-0522255537071664
Pubmed

The Catalytically Inactive Mutation of the Ubiquitin-Conjugating Enzyme CDC34 Affects its Stability and Cell Proliferation.

WDR3 CCDC47 NAT10 SRP14 MCM3

3.71e-0523755529564676
Pubmed

FBW7 suppresses ovarian cancer development by targeting the N6-methyladenosine binding protein YTHDF2.

CCDC47 NAT10 MYO18A SRP14 SSRP1 TOP2A KNOP1

4.40e-0560155733658012
Pubmed

SLFN11 promotes CDT1 degradation by CUL4 in response to replicative DNA damage, while its absence leads to synthetic lethality with ATR/CHK1 inhibitors.

MPHOSPH10 DDX55 CWC25 PDZRN3 TOP2A

4.78e-0525055533536335
Pubmed

The multi-subunit GID/CTLH E3 ubiquitin ligase promotes cell proliferation and targets the transcription factor Hbp1 for degradation.

UBR5 BRPF1 PAK1IP1 TOP2A SDAD1

5.06e-0525355529911972
Pubmed

Identification of toposome, a novel multisubunit complex containing topoisomerase IIalpha.

SSRP1 TOP2A

5.13e-05755215034300
Pubmed

SNIP1 Recruits TET2 to Regulate c-MYC Target Genes and Cellular DNA Damage Response.

WDR3 SSRP1 NIPBL ESF1 DDX10

5.66e-0525955530404004
Pubmed

A protein interaction landscape of breast cancer.

UBR5 NAT10 MYO18A PAK1IP1 SSRP1 TOP2A LARP7

6.15e-0563455734591612
Pubmed

Human Regulatory Protein Ki-1/57 Is a Target of SUMOylation and Affects PML Nuclear Body Formation.

DDX55 LARP7 KNOP1 DDX10

6.17e-0513455428695742
Pubmed

TNF-α inhibits glucocorticoid receptor-induced gene expression by reshaping the GR nuclear cofactor profile.

CCDC47 PLCB1 ZNFX1 CHD2 MPHOSPH10 NIPBL ESF1

6.40e-0563855731182584
Pubmed

Assembly of the U5 snRNP component PRPF8 is controlled by the HSP90/R2TP chaperones.

UBR5 CCDC47 DDX18 SRP14 TNRC6B MCM3 SSRP1 DDX55 NIPBL TOP2A

6.62e-051415551028515276
Pubmed

Hypermutation of immunoglobulin genes in memory B cells of DNA repair-deficient mice.

ATRX XPA

6.83e-0585529607915
Pubmed

Targeted and Interactome Proteomics Revealed the Role of PHD2 in Regulating BRD4 Proline Hydroxylation.

ATRX SRP14 MCM3 SSRP1 TOP2A DDX10

6.89e-0544155631239290
Pubmed

mTORC1 activity regulates post-translational modifications of glycine decarboxylase to modulate glycine metabolism and tumorigenesis.

NAT10 MYO18A LARP7 ESF1 DDX10

7.38e-0527455534244482
Pubmed

Acetylation of ELF5 suppresses breast cancer progression by promoting its degradation and targeting CCND1.

DDX18 SEC62 NAT10 MCM3 SSRP1 DDX55 LARP7

7.40e-0565355733742100
Pubmed

A protein-interaction network of interferon-stimulated genes extends the innate immune system landscape.

WDR3 UBR5 CCDC47 SEC62 NAT10 MCM3 SSRP1 TOP2A SDAD1 LARP7

7.66e-051440551030833792
Pubmed

Glutamylation of the DNA sensor cGAS regulates its binding and synthase activity in antiviral immunity.

TTLL6 AGBL2

8.78e-05955226829768
Pubmed

The OTUD5-UBR5 complex regulates FACT-mediated transcription at damaged chromatin.

UBR5 SSRP1

8.78e-05955230508113
Pubmed

Systematic screening reveals a role for BRCA1 in the response to transcription-associated DNA damage.

NAT10 SSRP1 NIPBL TOP2A

9.31e-0514955425184681
Pubmed

Dynamic Protein Interactions of the Polycomb Repressive Complex 2 during Differentiation of Pluripotent Cells.

TAF3 ATRX CHD2 SSRP1 TOP2A KNOP1

9.65e-0546955627634302
Pubmed

High-sensitivity profiling of SARS-CoV-2 noncoding region-host protein interactome reveals the potential regulatory role of negative-sense viral RNA.

CCDC47 SRP14 ZNFX1 DDX55 TOP2A LARP7

9.65e-0546955637314180
Pubmed

A High-Density Human Mitochondrial Proximity Interaction Network.

WDR3 BAZ2A CCDC47 DDX18 NAT10 MPHOSPH10 SSRP1 DDX55 TOP2A ESF1

1.05e-041496551032877691
Pubmed

The 5S RNP couples p53 homeostasis to ribosome biogenesis and nucleolar stress.

GTF3A PAK1IP1

1.10e-041055224120868
Pubmed

A genome-wide camptothecin sensitivity screen identifies a mammalian MMS22L-NFKBIL2 complex required for genomic stability.

MCM3 SSRP1

1.10e-041055221055985
Pubmed

Functional cooperation between FACT and MCM helicase facilitates initiation of chromatin DNA replication.

MCM3 SSRP1

1.10e-041055216902406
Pubmed

BPA modulates the WDR5/TET2 complex to regulate ERβ expression in eutopic endometrium and drives the development of endometriosis.

CCDC47 DDX18 NAT10 MYO18A ZNFX1 SSRP1 SDAD1

1.25e-0471155733022573
InteractionDDX23 interactions

TAF3 UBR5 BRPF1 DDX18 NAT10 UTP20 CHD2 MPHOSPH10 SSRP1 DDX55 CWC25 TOP2A SDAD1 LARP7 ESF1 KNOP1 DDX10

5.72e-154805517int:DDX23
InteractionPOLR1G interactions

WDR3 TAF3 BRPF1 DDX18 NAT10 UTP20 CHD2 MPHOSPH10 SSRP1 DDX55 NIPBL TOP2A SDAD1 LARP7 ESF1 KNOP1 DDX10

7.76e-154895517int:POLR1G
InteractionCENPA interactions

TAF3 ATRX BAZ2A CCDC47 BRPF1 DDX18 UTP20 SSRP1 DDX55 NIPBL TOP2A SDAD1 ESF1 KNOP1

1.10e-123775514int:CENPA
InteractionNOP56 interactions

WDR3 ATRX DDX18 NAT10 SRP14 UTP20 MPHOSPH10 SSRP1 DDX55 CWC25 TOP2A SDAD1 LARP7 ESF1 KNOP1 DDX10

1.46e-125705516int:NOP56
InteractionNUP43 interactions

WDR3 TAF3 UBR5 BAZ2A DDX18 TNRC6B UTP20 XPA MPHOSPH10 SSRP1 DDX55 NIPBL TOP2A SDAD1 LARP7 KNOP1

5.86e-126255516int:NUP43
InteractionNIFK interactions

WDR3 TAF3 DDX18 NAT10 SRP14 UTP20 MPHOSPH10 PAK1IP1 DDX55 SDAD1 LARP7 ESF1 KNOP1 DDX10

6.65e-124315514int:NIFK
InteractionZNF330 interactions

TAF3 BRPF1 DDX18 NAT10 UTP20 SSRP1 DDX55 NIPBL TOP2A SDAD1 LARP7 ESF1 KNOP1 DDX10

1.05e-114465514int:ZNF330
InteractionRPL31 interactions

WDR3 TAF3 BAZ2A CCDC47 DDX18 NAT10 UTP20 MPHOSPH10 PAK1IP1 DDX55 TOP2A SDAD1 LARP7 ESF1 KNOP1 DDX10

2.07e-116805516int:RPL31
InteractionUSP36 interactions

WDR3 DDX18 NAT10 SRP14 UTP20 MPHOSPH10 PAK1IP1 SSRP1 DDX55 TOP2A SDAD1 LARP7 ESF1 KNOP1 DDX10

4.16e-115995515int:USP36
InteractionSIRT6 interactions

WDR3 ATRX UBR5 DDX18 NAT10 SRP14 MCM3 MPHOSPH10 PAK1IP1 SSRP1 DDX55 TOP2A SDAD1 LARP7 ESF1

8.07e-116285515int:SIRT6
InteractionFGFBP1 interactions

DDX18 NAT10 MPHOSPH10 PAK1IP1 SSRP1 DDX55 SDAD1 LARP7 ESF1 KNOP1 DDX10

8.54e-112575511int:FGFBP1
InteractionH3C1 interactions

TAF3 ATRX BAZ2A BRPF1 DDX18 NAT10 PCDH11X MYO18A SRP14 SSRP1 NIPBL LRIF1 TOP2A SDAD1 LARP7 KNOP1 DDX10

1.35e-109015517int:H3C1
InteractionIFI16 interactions

WDR3 BAZ2A DDX18 NAT10 UTP20 MPHOSPH10 PAK1IP1 SSRP1 DDX55 TOP2A SDAD1 LARP7 ESF1 KNOP1 DDX10

4.79e-107145515int:IFI16
InteractionMEN1 interactions

WDR3 ATRX UBR5 BAZ2A BRPF1 DDX18 NAT10 SRP14 UTP20 MPHOSPH10 PAK1IP1 SSRP1 DDX55 TOP2A SDAD1 KNOP1 DDX10

1.04e-0910295517int:MEN1
InteractionFBL interactions

WDR3 BAZ2A DDX18 NAT10 UTP20 MPHOSPH10 SSRP1 DDX55 TOP2A SDAD1 LARP7 ESF1 KNOP1 DDX10

1.18e-096395514int:FBL
InteractionH2BC8 interactions

ATRX BAZ2A CCDC47 BRPF1 NAT10 SSRP1 DDX55 NIPBL LRIF1 TOP2A ESF1 KNOP1 DDX10

3.58e-095765513int:H2BC8
InteractionHECTD1 interactions

WDR3 DDX18 NAT10 SCAPER MYO18A UTP20 MPHOSPH10 PAK1IP1 SSRP1 DDX55 TOP2A SDAD1 LARP7 ESF1 KNOP1 DDX10

4.56e-099845516int:HECTD1
InteractionSMC5 interactions

WDR3 TAF3 ATRX BAZ2A DDX18 NAT10 SRP14 MCM3 MPHOSPH10 SSRP1 CWC25 NIPBL TOP2A ESF1 KNOP1 DDX10

5.74e-0910005516int:SMC5
InteractionRPS6 interactions

WDR3 DDX18 NAT10 UTP20 ATF4 MPHOSPH10 PAK1IP1 DDX55 CWC25 TOP2A SDAD1 LARP7 ESF1 KNOP1 DDX10

7.51e-098745515int:RPS6
InteractionMYCN interactions

WDR3 DDX18 NAT10 SRP14 TNRC6B MCM3 CHD2 MPHOSPH10 PAK1IP1 PRKRIP1 SSRP1 DDX55 CWC25 SDAD1 LARP7 ESF1 KNOP1 DDX10

1.14e-0813735518int:MYCN
InteractionRPS24 interactions

WDR3 DDX18 NAT10 UTP20 MPHOSPH10 DDX55 TOP2A SDAD1 LARP7 ESF1 KNOP1 DDX10

1.48e-085295512int:RPS24
InteractionNR2C2 interactions

WDR3 TAF3 BAZ2A CCDC47 DDX18 NAT10 SRP14 MCM3 CHD2 MPHOSPH10 PAK1IP1 SSRP1 NIPBL LRIF1 TOP2A LARP7 KNOP1 DDX10

1.60e-0814035518int:NR2C2
InteractionFGF8 interactions

WDR3 DDX18 NAT10 MPHOSPH10 DDX55 SDAD1 DDX10

1.71e-08108557int:FGF8
InteractionCHCHD1 interactions

WDR3 BAZ2A DDX18 NAT10 MPHOSPH10 SSRP1 TOP2A LARP7 ESF1

1.82e-08243559int:CHCHD1
InteractionPOLR1E interactions

WDR3 DDX18 NAT10 UTP20 MPHOSPH10 SSRP1 LRIF1 SDAD1 ESF1 KNOP1

3.21e-083505510int:POLR1E
InteractionPARP1 interactions

WDR3 TAF3 DDX18 NAT10 MCM3 UTP20 MPHOSPH10 SSRP1 DDX55 NIPBL LRIF1 TOP2A SDAD1 LARP7 ESF1 KNOP1 DDX10

4.09e-0813165517int:PARP1
InteractionMNDA interactions

WDR3 DDX18 NAT10 UTP20 PAK1IP1 LARP7 KNOP1 DDX10

4.14e-08188558int:MNDA
InteractionSIRT7 interactions

WDR3 UBR5 BAZ2A DDX18 NAT10 UTP20 CHD2 MPHOSPH10 NIPBL TOP2A LARP7 ESF1 DDX10

7.38e-087445513int:SIRT7
InteractionH3-3A interactions

TAF3 ATRX BAZ2A BRPF1 NAT10 CHD2 SSRP1 DDX55 NIPBL LRIF1 TOP2A KNOP1 DDX10

7.98e-087495513int:H3-3A
InteractionRIT1 interactions

WDR3 DDX18 NAT10 SRP14 MCM3 UTP20 MPHOSPH10 PAK1IP1 PRKRIP1 DDX55 NIPBL LRIF1 TOP2A SDAD1 ESF1 DDX10

1.04e-0712305516int:RIT1
InteractionKAT6A interactions

TAF3 ATRX CCDC47 BRPF1 NAT10 TNRC6B MPHOSPH10 SSRP1 TOP2A ESF1 KNOP1

1.07e-075105511int:KAT6A
InteractionDDRGK1 interactions

WDR3 CCDC47 DDX18 SEC62 NAT10 MYO18A SRP14 MCM3 UTP20 PAK1IP1 SSRP1 DDX55 TOP2A SDAD1 KNOP1 DDX10

1.28e-0712495516int:DDRGK1
InteractionZNF668 interactions

DDX18 NAT10 SRP14 MPHOSPH10 PAK1IP1 LARP7 KNOP1 DDX10

1.71e-07226558int:ZNF668
InteractionRPSA2 interactions

NAT10 SRP14 MPHOSPH10 LARP7 ESF1 KNOP1 DDX10

1.81e-07152557int:RPSA2
InteractionABT1 interactions

NAT10 SRP14 MPHOSPH10 PAK1IP1 DDX55 SDAD1 LARP7 ESF1 KNOP1 DDX10

1.88e-074235510int:ABT1
InteractionDOT1L interactions

WDR3 ATRX BRPF1 DDX18 UTP20 MPHOSPH10 PAK1IP1 SSRP1 DDX55 TOP2A SDAD1 LARP7 KNOP1

1.89e-078075513int:DOT1L
InteractionMECP2 interactions

TAF3 ATRX DDX18 NAT10 MYO18A SRP14 TNRC6B MCM3 CHD2 PAK1IP1 SSRP1 DDX55 NIPBL SDAD1 ESF1 KNOP1

1.93e-0712875516int:MECP2
InteractionH2AC17 interactions

NAT10 PAK1IP1 SSRP1 DDX55 SDAD1 LARP7 KNOP1 DDX10

2.09e-07232558int:H2AC17
InteractionCOIL interactions

WDR3 BRPF1 DDX18 UTP20 SSRP1 NIPBL TOP2A SDAD1 LARP7 ESF1 KNOP1

2.37e-075525511int:COIL
InteractionRPL35 interactions

UBR5 DDX18 NAT10 SRP14 MPHOSPH10 PAK1IP1 TOP2A SDAD1 LARP7 KNOP1 DDX10

2.64e-075585511int:RPL35
InteractionDDX18 interactions

WDR3 DDX18 NAT10 UTP20 MPHOSPH10 DDX55 LARP7 ESF1 DDX10

2.75e-07334559int:DDX18
InteractionDHX40 interactions

UBR5 NAT10 UTP20 MPHOSPH10 CWC25 SDAD1 ESF1 DDX10

3.58e-07249558int:DHX40
InteractionKPNA1 interactions

UBR5 UTP20 PAK1IP1 DDX55 NIPBL TOP2A SDAD1 LARP7 ESF1

4.18e-07351559int:KPNA1
InteractionH2AB2 interactions

NAT10 MPHOSPH10 SSRP1 SDAD1 LARP7 DDX10

4.56e-07107556int:H2AB2
InteractionNPM1 interactions

WDR3 TAF3 DDX18 NAT10 CCDC80 MPHOSPH10 PAK1IP1 SSRP1 DDX55 TOP2A SDAD1 LARP7 ESF1 KNOP1 DDX10

4.84e-0712015515int:NPM1
InteractionPYHIN1 interactions

ATRX UBR5 BAZ2A SRP14 MPHOSPH10 SSRP1 TOP2A SDAD1 LARP7

4.93e-07358559int:PYHIN1
InteractionHMGB1 interactions

TAF3 ATRX DDX18 NAT10 SRP14 XPA SSRP1 LRIF1 TOP2A LARP7

6.71e-074865510int:HMGB1
InteractionNEIL1 interactions

DDX18 NAT10 MPHOSPH10 PAK1IP1 DDX55 LARP7 KNOP1 DDX10

7.80e-07276558int:NEIL1
InteractionH3C3 interactions

ATRX BAZ2A BRPF1 NAT10 SSRP1 DDX55 NIPBL LRIF1 TOP2A KNOP1

7.92e-074955510int:H3C3
InteractionCHD4 interactions

WDR3 BAZ2A DDX18 NAT10 MCM3 SSRP1 DDX55 LRIF1 TOP2A SDAD1 LARP7 KNOP1 DDX10

1.04e-069385513int:CHD4
InteractionRPS8 interactions

NAT10 SRP14 MPHOSPH10 PAK1IP1 DDX55 TOP2A SDAD1 LARP7 ESF1 KNOP1 DDX10

1.17e-066495511int:RPS8
InteractionPRKRA interactions

DDX18 SRP14 MPHOSPH10 PAK1IP1 DDX55 SDAD1 LARP7 KNOP1 DDX10

1.24e-06400559int:PRKRA
InteractionDNAJC9 interactions

WDR3 DDX18 NAT10 MCM3 SSRP1 LARP7 ESF1 DDX10

1.32e-06296558int:DNAJC9
InteractionSURF6 interactions

WDR3 DDX18 NAT10 MYO18A SRP14 PAK1IP1 SDAD1 LARP7 ESF1

2.08e-06426559int:SURF6
InteractionTERF2IP interactions

BAZ2A SRP14 SSRP1 DDX55 NIPBL LRIF1 TOP2A LARP7 KNOP1 DDX10

2.12e-065525510int:TERF2IP
InteractionRPL14 interactions

UBR5 DDX18 SRP14 MPHOSPH10 PAK1IP1 SSRP1 TOP2A LARP7 KNOP1 DDX10

2.18e-065545510int:RPL14
InteractionBRD2 interactions

TAF3 BAZ2A BRPF1 DDX18 NAT10 SSRP1 TOP2A LARP7 KNOP1

2.20e-06429559int:BRD2
InteractionHDLBP interactions

TAF3 CCDC47 DDX18 NAT10 SRP14 TNRC6B CHD2 PAK1IP1 SSRP1 DDX55 LARP7 KNOP1

2.56e-068555512int:HDLBP
InteractionRPS10 interactions

DDX18 NAT10 MPHOSPH10 PAK1IP1 DDX55 TOP2A SDAD1 LARP7 KNOP1 DDX10

2.69e-065675510int:RPS10
InteractionRPL3 interactions

DDX18 NAT10 SRP14 MPHOSPH10 PAK1IP1 DDX55 TOP2A SDAD1 LARP7 KNOP1 DDX10

3.28e-067225511int:RPL3
InteractionNOL12 interactions

NAT10 PAK1IP1 DDX55 LARP7 KNOP1 DDX10

3.70e-06153556int:NOL12
InteractionOBSL1 interactions

WDR3 DDX18 NAT10 MCM3 UTP20 SSRP1 DDX55 NIPBL TOP2A SDAD1 LARP7 DDX10

4.45e-069025512int:OBSL1
InteractionMAGEB2 interactions

DDX18 NAT10 MPHOSPH10 PAK1IP1 DDX55 SDAD1 KNOP1 DDX10

4.47e-06349558int:MAGEB2
InteractionCHD3 interactions

WDR3 DDX18 NAT10 MCM3 SSRP1 DDX55 LRIF1 TOP2A SDAD1 KNOP1 DDX10

5.16e-067575511int:CHD3
InteractionADARB1 interactions

WDR3 NAT10 MPHOSPH10 SSRP1 DDX55 TOP2A SDAD1 KNOP1 DDX10

6.39e-06489559int:ADARB1
InteractionRBM28 interactions

DDX18 NAT10 SRP14 PAK1IP1 SDAD1 LARP7 ESF1 KNOP1

6.60e-06368558int:RBM28
InteractionNPM3 interactions

DDX18 NAT10 MPHOSPH10 PAK1IP1 SDAD1 LARP7 DDX10

6.90e-06262557int:NPM3
InteractionRBM4B interactions

WDR3 NAT10 MPHOSPH10 PAK1IP1 TOP2A KNOP1 DDX10

6.90e-06262557int:RBM4B
InteractionLYAR interactions

DDX18 NAT10 SRP14 MPHOSPH10 PAK1IP1 SSRP1 LARP7 DDX10

7.28e-06373558int:LYAR
InteractionRPL19 interactions

DDX18 NAT10 SRP14 MPHOSPH10 PAK1IP1 DDX55 TOP2A LARP7 KNOP1 DDX10

7.62e-066385510int:RPL19
InteractionRPS19 interactions

DDX18 NAT10 MYO18A MPHOSPH10 PAK1IP1 DDX55 SDAD1 LARP7 KNOP1 DDX10

7.72e-066395510int:RPS19
InteractionSRSF6 interactions

DDX18 NAT10 MPHOSPH10 PAK1IP1 SSRP1 DDX55 LARP7 KNOP1 DDX10

8.02e-06503559int:SRSF6
InteractionRPL36 interactions

DDX18 MPHOSPH10 PAK1IP1 DDX55 TOP2A SDAD1 LARP7 KNOP1 DDX10

8.15e-06504559int:RPL36
InteractionKRR1 interactions

DDX18 NAT10 MPHOSPH10 PAK1IP1 DDX55 LARP7 KNOP1 DDX10

8.18e-06379558int:KRR1
InteractionRPS2 interactions

UBR5 DDX18 NAT10 SRP14 MPHOSPH10 PAK1IP1 TOP2A LARP7 KNOP1 DDX10

9.84e-066575510int:RPS2
InteractionESF1 interactions

DDX18 NAT10 MPHOSPH10 SDAD1 ESF1 DDX10

1.00e-05182556int:ESF1
InteractionFOXA1 interactions

MCM3 UTP20 MPHOSPH10 PAK1IP1 SSRP1 DDX55 TOP2A SDAD1 ESF1

1.13e-05525559int:FOXA1
InteractionSSRP1 interactions

ATRX UBR5 BRPF1 MCM3 CHD2 SSRP1 NIPBL TOP2A SDAD1 LARP7

1.41e-056855510int:SSRP1
InteractionAURKA interactions

ATRX UBR5 TNRC6B ZNFX1 XPA MPHOSPH10 SSRP1 SDAD1 LARP7 KNOP1

1.62e-056965510int:AURKA
InteractionTOP1 interactions

UBR5 BRPF1 NAT10 MCM3 UTP20 SSRP1 DDX55 NIPBL TOP2A LARP7

1.62e-056965510int:TOP1
InteractionFGF13 interactions

NAT10 MPHOSPH10 DDX55 KNOP1 DDX10

1.67e-05117555int:FGF13
InteractionRPL13 interactions

DDX18 NAT10 MPHOSPH10 PAK1IP1 DDX55 TOP2A SDAD1 LARP7 KNOP1 DDX10

1.70e-057005510int:RPL13
InteractionUHRF2 interactions

ATRX NAT10 CHD2 SSRP1 NIPBL TOP2A

1.71e-05200556int:UHRF2
InteractionZC3H10 interactions

DDX18 MYO18A MPHOSPH10 PAK1IP1 SDAD1 DDX10

1.71e-05200556int:ZC3H10
InteractionRPL10 interactions

DDX18 NAT10 SRP14 PAK1IP1 DDX55 NIPBL TOP2A LARP7 KNOP1 DDX10

1.75e-057025510int:RPL10
InteractionLIN28A interactions

DDX18 NAT10 SRP14 MPHOSPH10 PAK1IP1 DDX55 LARP7 DDX10

1.75e-05421558int:LIN28A
InteractionTNIP1 interactions

WDR3 DDX18 NAT10 MYO18A SRP14 MCM3 UTP20 MPHOSPH10 PAK1IP1 SSRP1 DDX55 TOP2A DDX10

1.79e-0512175513int:TNIP1
InteractionNOP58 interactions

WDR3 DDX18 NAT10 UTP20 MPHOSPH10 LARP7 ESF1

2.01e-05309557int:NOP58
InteractionKIF20A interactions

WDR3 UBR5 DDX18 NAT10 MYO18A SRP14 TNRC6B MCM3 CHD2 SSRP1 CCDC171 TOP2A

2.10e-0510525512int:KIF20A
InteractionCIT interactions

WDR3 DDX18 NAT10 MYO18A SRP14 MCM3 UTP20 CHD2 MPHOSPH10 SSRP1 NIPBL TOP2A ESF1 DDX10

2.47e-0514505514int:CIT
InteractionH2AJ interactions

SSRP1 CWC25 LARP7 ESF1 KNOP1

2.48e-05127555int:H2AJ
InteractionGTPBP4 interactions

WDR3 DDX18 SRP14 MPHOSPH10 DDX55 SDAD1 LARP7 ESF1

2.52e-05443558int:GTPBP4
InteractionRPL18A interactions

DDX18 NAT10 MPHOSPH10 PAK1IP1 SDAD1 LARP7 KNOP1 DDX10

2.69e-05447558int:RPL18A
InteractionC7orf50 interactions

PAK1IP1 TOP2A SDAD1 LARP7 ESF1 DDX10

2.79e-05218556int:C7orf50
InteractionRPL13A interactions

DDX18 NAT10 MPHOSPH10 PAK1IP1 DDX55 SDAD1 LARP7 KNOP1 DDX10

2.88e-05591559int:RPL13A
InteractionRBM19 interactions

NAT10 SRP14 MPHOSPH10 LARP7 KNOP1 DDX10

3.01e-05221556int:RBM19
InteractionZC3HAV1 interactions

DDX18 SEC62 SRP14 TNRC6B MPHOSPH10 PAK1IP1 LARP7 KNOP1 DDX10

3.50e-05606559int:ZC3HAV1
InteractionLMNB1 interactions

ATRX CCDC47 DDX18 SEC62 NAT10 UTP20 ATF4 NIPBL DDX10

3.69e-05610559int:LMNB1
InteractionDNAJC8 interactions

WDR3 ATRX BAZ2A SRP14 SSRP1 DDX10

3.76e-05230556int:DNAJC8
InteractionGAR1 interactions

UBR5 DDX18 SRP14 SDAD1 LARP7 ESF1

3.95e-05232556int:GAR1
GeneFamilyDEAD-box helicases

DDX18 DDX55 DDX10

5.01e-0542313499
GeneFamilyPHD finger proteins

TAF3 BAZ2A BRPF1

4.85e-049031388
GeneFamilyPDZ domain containing

MYO18A PDZRN3 PDZRN4

2.20e-031523131220
CoexpressionCAIRO_HEPATOBLASTOMA_CLASSES_UP

WDR3 CCDC47 DDX18 NAT10 MCM3 UTP20 SSRP1 TOP2A ESF1 DDX10

5.08e-076125510M4772
CoexpressionDESCARTES_ORGANOGENESIS_EPENDYMAL_CELL

CCDC170 FHAD1 LRRIQ1 TTLL6 AK9 AGBL2 RSPH10B

2.02e-06282557MM3642
CoexpressionGSE12845_IGD_NEG_BLOOD_VS_NAIVE_TONSIL_BCELL_DN

NAT10 UTP20 ATF4 PRKRIP1 CWC25 TNP2

3.56e-06197556M3193
CoexpressionGSE3982_CENT_MEMORY_CD4_TCELL_VS_TH2_DN

MCM3 PAK1IP1 SSRP1 TOP2A ESF1 KNOP1

3.89e-06200556M5592
CoexpressionDESCARTES_FETAL_STOMACH_CILIATED_EPITHELIAL_CELLS

CCDC170 RSPH10B2 FHAD1 LRRIQ1 AK9 AGBL2 RSPH10B

4.37e-06317557M40298
CoexpressionDESCARTES_FETAL_LUNG_CILIATED_EPITHELIAL_CELLS

CCDC170 RSPH10B2 FHAD1 LRRIQ1 TTLL6 AK9 AGBL2 RSPH10B

1.60e-05540558M40241
CoexpressionPUJANA_CHEK2_PCC_NETWORK

GTF3A DDX18 MCM3 UTP20 MPHOSPH10 SSRP1 TOP2A LARP7 DDX10

2.69e-05761559M11961
CoexpressionDAZARD_RESPONSE_TO_UV_NHEK_DN

ATRX UBR5 XPA MPHOSPH10 TOP2A LARP7

3.87e-05300556M8702
CoexpressionGSE21670_UNTREATED_VS_IL6_TREATED_STAT3_KO_CD4_TCELL_DN

WDR3 GTF3A UTP20 PAK1IP1 DDX10

5.84e-05197555M7458
CoexpressionGSE22033_UNTREATED_VS_ROSIGLITAZONE_TREATED_MEF_UP

GTF3A TNRC6B MCM3 XPA MPHOSPH10

6.28e-05200555M7695
CoexpressionGSE16385_UNTREATED_VS_12H_ROSIGLITAZONE_IL4_TREATED_MACROPHAGE_DN

WDR3 FHAD1 SCAPER SRP14 NIPBL

6.28e-05200555M7913
CoexpressionGSE35825_IFNA_VS_IFNG_STIM_MACROPHAGE_DN

WDR3 ATRX TNRC6B XPA SDAD1

6.28e-05200555M8656
CoexpressionGSE17721_POLYIC_VS_CPG_12H_BMDC_DN

GTF3A DDX18 MCM3 SSRP1 DDX10

6.28e-05200555M3949
CoexpressionHAMAI_APOPTOSIS_VIA_TRAIL_UP

CCDC47 SEC62 MPHOSPH10 NIPBL SDAD1 LARP7 ESF1 DDX10

6.36e-05656558M18979
CoexpressionLEE_BMP2_TARGETS_DN

WDR3 DDX18 NAT10 MCM3 UTP20 MPHOSPH10 SDAD1 ESF1 KNOP1

1.01e-04904559M2325
CoexpressionZHAN_MULTIPLE_MYELOMA_MF_DN

SEC62 SCAPER PDZRN4

1.02e-0443553M513
CoexpressionLEE_BMP2_TARGETS_DN

WDR3 DDX18 NAT10 MCM3 UTP20 MPHOSPH10 SDAD1 ESF1 KNOP1

1.18e-04922559MM1068
CoexpressionWHITFIELD_CELL_CYCLE_M_G1

ZNFX1 PAK1IP1 LRIF1 LARP7

1.44e-04126554M2078
CoexpressionKRIGE_RESPONSE_TO_TOSEDOSTAT_6HR_DN

WDR3 BAZ2A DDX18 SEC62 PAK1IP1 CWC25 ESF1 KNOP1 DDX10

1.48e-04950559M19907
CoexpressionCHICAS_RB1_TARGETS_GROWING

ATRX MCM3 CCDC80 SSRP1 TOP2A

1.54e-04242555M2128
CoexpressionFISCHER_DREAM_TARGETS

MCM3 ZNFX1 ATF4 SSRP1 NIPBL TOP2A LARP7 KNOP1 DDX10

1.71e-04969559M149
CoexpressionKENNY_CTNNB1_TARGETS_DN

UBR5 CCDC47 SEC62

1.80e-0452553M19134
CoexpressionGRYDER_PAX3FOXO1_ENHANCERS_IN_TADS

GTF3A NAT10 MYO18A MCM3 CHD2 PRKRIP1 PDZRN3 TOP2A DDX10

2.31e-041009559M157
CoexpressionDORN_ADENOVIRUS_INFECTION_32HR_UP

ATF4 TOP2A

2.35e-0411552M12801
CoexpressionDAZARD_UV_RESPONSE_CLUSTER_G6

UBR5 XPA TOP2A LARP7

2.46e-04145554M1810
CoexpressionHALLMARK_MYC_TARGETS_V2

DDX18 UTP20 MPHOSPH10

2.49e-0458553M5928
CoexpressionGSE37319_WT_VS_RC3H1_KO_CD44LOW_CD8_TCELL_UP

RSPH10B2 LRRIQ1 MYO18A MPHOSPH10

2.73e-04149554M8918
CoexpressionSHEN_SMARCA2_TARGETS_UP

ATRX SEC62 SCAPER SRP14 XPA LARP7

2.73e-04429556M29
CoexpressionKRIGE_RESPONSE_TO_TOSEDOSTAT_24HR_DN

WDR3 DDX18 SEC62 UTP20 PAK1IP1 CWC25 ESF1 KNOP1 DDX10

3.00e-041045559M8525
CoexpressionGABRIELY_MIR21_TARGETS

ATRX UBR5 TNRC6B NIPBL TOP2A

3.49e-04289555M2196
CoexpressionMANALO_HYPOXIA_DN

DDX18 NAT10 MCM3 UTP20 PAK1IP1

3.66e-04292555M18562
CoexpressionDORN_ADENOVIRUS_INFECTION_48HR_UP

ATF4 TOP2A

3.87e-0414552M6181
CoexpressionXU_RESPONSE_TO_TRETINOIN_AND_NSC682994_DN

DDX18 DDX10

3.87e-0414552M3905
CoexpressionGAO_ESOPHAGUS_25W_C1_CILIATED_EPITHELIAL_CELLS

CCDC170 FHAD1 LRRIQ1 TTLL6 AK9 AGBL2

3.92e-04459556M39136
CoexpressionBENPORATH_CYCLING_GENES

SEC62 ZNFX1 PAK1IP1 NIPBL LRIF1 TOP2A LARP7

3.96e-04648557M8156
CoexpressionGARGALOVIC_RESPONSE_TO_OXIDIZED_PHOSPHOLIPIDS_RED_UP

ATF4 DDX10

5.09e-0416552M4035
CoexpressionDESCARTES_MAIN_FETAL_CILIATED_EPITHELIAL_CELLS

CCDC170 RSPH10B2 FHAD1 LRRIQ1 TTLL6 AK9 RSPH10B

5.19e-04678557M40124
CoexpressionBRUINS_UVC_RESPONSE_EARLY_LATE

ATRX CHD2 NIPBL PDZRN3 PMFBP1

5.24e-04316555M2248
CoexpressionBRUINS_UVC_RESPONSE_EARLY_LATE

ATRX CHD2 NIPBL PDZRN3 PMFBP1

5.55e-04320555MM1063
CoexpressionAtlasdev gonad_e13.5_M_GermCell_Oct_top-relative-expression-ranked_1000

WDR3 UBR5 BAZ2A DDX18 NAT10 SCAPER UTP20 MPHOSPH10 PAK1IP1 CCDC171 SDAD1 ESF1 PASD1 DDX10

1.26e-088105514gudmap_dev gonad_e13.5_M_GermCell_Oct_1000
CoexpressionAtlasdev gonad_e12.5_M_GermCellTestis_Oct_top-relative-expression-ranked_1000

WDR3 UBR5 BAZ2A DDX18 NAT10 SCAPER MCM3 UTP20 MPHOSPH10 SDAD1 ESF1 DDX10

6.96e-077955512gudmap_dev gonad_e12.5_M_GermCellTestis_Oct_1000
CoexpressionAtlasFacebaseRNAseq_e10.5_Neural Epithelium Flanking Eminence_top-relative-expression-ranked_1000

ATRX UBR5 NAT10 PCDH11X UTP20 CHD2 MPHOSPH10 CCDC171 NIPBL LRIF1 ESF1 KNOP1 DDX10

1.05e-069895513Facebase_RNAseq_e10.5_Neural Epithelium Flanking Eminence_1000
CoexpressionAtlasdev gonad_e12.5_M_GermCellTestis_Oct_k-means-cluster#1_top-relative-expression-ranked_1000

WDR3 UBR5 DDX18 NAT10 UTP20 MPHOSPH10 SDAD1

2.37e-05334557gudmap_dev gonad_e12.5_M_GermCellTestis_Oct_k1_1000
CoexpressionAtlasfacebase_RNAseq_e8.5_FloorPlate_2500_K3

DDX18 NAT10 MCM3 UTP20 XPA MPHOSPH10 LRIF1 TOP2A SDAD1 LARP7 ESF1 KNOP1 DDX10

3.62e-0513715513facebase_RNAseq_e8.5_FloorPlate_2500_K3
CoexpressionAtlasdev gonad_e12.5_F_GermCellOvary_Oct_k-means-cluster#4_top-relative-expression-ranked_1000

CCDC170 UBR5 BAZ2A UTP20 SDAD1 DDX10

3.83e-05243556gudmap_dev gonad_e12.5_F_GermCellOvary_Oct_k4_1000
CoexpressionAtlasFacebaseRNAseq_e8.5_Hind Brain Neural Epithelium_top-relative-expression-ranked_1000_k-means-cluster#3

DDX18 MCM3 PAK1IP1 SDAD1 KNOP1 DDX10

9.26e-05285556Facebase_RNAseq_e8.5_Hind Brain Neural Epithelium_1000_K3
CoexpressionAtlasFacebaseRNAseq_e10.5_Neural Epithelium Flanking Eminence_top-relative-expression-ranked_500_k-means-cluster#3

ATRX UBR5 MPHOSPH10 NIPBL ESF1

1.38e-04192555Facebase_RNAseq_e10.5_Neural Epithelium Flanking Eminence_500_K3
CoexpressionAtlasdev gonad_e11.5_M_PrimGermCell_Oct_k-means-cluster#4_top-relative-expression-ranked_1000

UBR5 DDX18 NAT10 UTP20 MPHOSPH10 SDAD1

1.60e-04315556gudmap_dev gonad_e11.5_M_PrimGermCell_Oct_k4_1000
CoexpressionAtlasdev gonad_e11.5_M_PrimGermCell_Oct_top-relative-expression-ranked_1000

UBR5 BAZ2A DDX18 NAT10 MCM3 UTP20 MPHOSPH10 SDAD1 DDX10

1.64e-04781559gudmap_dev gonad_e11.5_M_PrimGermCell_Oct_1000
CoexpressionAtlasfacebase_RNAseq_e8.5_NeuroEpith_hindBrain_2500_K1

DDX18 NAT10 MCM3 MPHOSPH10 LRIF1 TOP2A SDAD1 LARP7 ESF1 KNOP1 DDX10

1.65e-0411645511facebase_RNAseq_e8.5_NeuroEpith_hindBrain_2500_K1
CoexpressionAtlasFacebaseRNAseq_e8.5_Hind Brain Neural Epithelium_top-relative-expression-ranked_1000

BAZ2A DDX18 NAT10 MCM3 MPHOSPH10 PAK1IP1 SDAD1 ESF1 KNOP1 DDX10

2.02e-049915510Facebase_RNAseq_e8.5_Hind Brain Neural Epithelium_1000
CoexpressionAtlasdev gonad_e13.5_M_GermCell_Oct_k-means-cluster#1_top-relative-expression-ranked_1000

WDR3 UBR5 UTP20 MPHOSPH10 ESF1 DDX10

2.16e-04333556gudmap_dev gonad_e13.5_M_GermCell_Oct_k1_1000
CoexpressionAtlasfacebase_RNAseq_e10.5_Emin_LatNas_2500_K3

ATRX GRK4 NAT10 UTP20 MPHOSPH10 NIPBL LRIF1 TOP2A LARP7 ESF1 DDX10

3.22e-0412575511facebase_RNAseq_e10.5_Emin_LatNas_2500_K3
CoexpressionAtlasdev gonad_e13.5_M_GermCell_Oct_top-relative-expression-ranked_500

UBR5 SCAPER UTP20 CCDC171 PASD1 DDX10

5.43e-04396556gudmap_dev gonad_e13.5_M_GermCell_Oct_500
CoexpressionAtlasfacebase_RNAseq_e8.5_NeuroEpith_hindBrain_2500

DDX18 NAT10 MCM3 MPHOSPH10 LRIF1 TOP2A SDAD1 LARP7 ESF1 KNOP1 DDX10

5.78e-0413475511facebase_RNAseq_e8.5_NeuroEpith_hindBrain_2500
CoexpressionAtlasFacebaseRNAseq_e8.5_Hind Brain Neural Epithelium_top-relative-expression-ranked_2500_k-means-cluster#2

WDR3 DDX18 NAT10 MCM3 UTP20 ATF4 PAK1IP1 SDAD1 DDX10

6.05e-04933559Facebase_RNAseq_e8.5_Hind Brain Neural Epithelium_2500_K2
CoexpressionAtlasfallopian tube

CCDC170 RSPH10B2 FHAD1 LRRIQ1 AGBL2 RSPH10B

6.35e-04408556fallopian tube
CoexpressionAtlasPluripotent Stem Cells_vs_Embryoid Body Cells-Confounder_removed-fold2.0_adjp0.05

WDR3 UBR5 DDX18 NAT10 MCM3 UTP20 PAK1IP1 LARP7 ESF1 KNOP1

6.89e-0411575510PCBC_ratio_SC_vs_EB_cfr-2X-p05
ToppCellH1299-infected-SARSCoV2|infected / Cell line, Condition and Strain

TAF3 ATRX DDX18 SCAPER CHD2 DDX55 TOP2A LARP7 ESF1 KNOP1

5.07e-1419755100fa3e4cf93e77d78b1f97b906c5b13ca741ae17e
ToppCellPND01-Epithelial-Epithelial_Airway-Ciliated/Deuterosomal-Ciliated-Ciliated_mature|PND01 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif

CCDC170 FHAD1 LRRIQ1 TTLL6 AK9 AGBL2 RSPH10B

3.53e-09189557b55de812043b670cbde810d7d42f45909b6d66ef
ToppCellPND01-Epithelial-Epithelial_Airway|PND01 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif

CCDC170 FHAD1 LRRIQ1 TTLL6 AK9 AGBL2 RSPH10B

3.53e-0918955738cde34295566a4ecaf7d0a81c5a192cf17d0459
ToppCellPND10-Epithelial-Epithelial_Airway-Ciliated/Deuterosomal|PND10 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif

CCDC170 FHAD1 LRRIQ1 TTLL6 AK9 AGBL2 RSPH10B

3.53e-09189557a85099bd598a27ee64ee0664d051d89fa8d62fc9
ToppCellPND01-Epithelial-Epithelial_Airway-Ciliated/Deuterosomal-Ciliated|PND01 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif

CCDC170 FHAD1 LRRIQ1 TTLL6 AK9 AGBL2 RSPH10B

3.53e-091895574e83e49d1265ffe507fdb72924c77c4d1c73f0bd
ToppCellPND03-Epithelial-Epithelial_Airway-Ciliated/Deuterosomal-Ciliated|PND03 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif

CCDC170 FHAD1 LRRIQ1 TTLL6 AK9 AGBL2 RSPH10B

3.80e-09191557bda8faf92495c8b362850c0aff4fc6fbdd9c563b
ToppCellPND03-Epithelial-Epithelial_Airway-Ciliated/Deuterosomal-Ciliated-Ciliated_mature|PND03 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif

CCDC170 FHAD1 LRRIQ1 TTLL6 AK9 AGBL2 RSPH10B

3.80e-091915576880fb348bb0915db9a5da4f3566ca9ff93ed258
ToppCellPND01-Epithelial-Epithelial_Airway-Ciliated/Deuterosomal|PND01 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif

CCDC170 FHAD1 LRRIQ1 TTLL6 AK9 AGBL2 RSPH10B

3.80e-0919155796483adb97c81208aa513782550acd8a08b63866
ToppCellPND03-Epithelial-Epithelial_Airway-Ciliated/Deuterosomal|PND03 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif

CCDC170 FHAD1 LRRIQ1 TTLL6 AK9 AGBL2 RSPH10B

3.94e-09192557b5cdc2dae3154b1e4ade88f841f38584402ffe33
ToppCellPND03-Epithelial-Epithelial_Airway|PND03 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif

CCDC170 FHAD1 LRRIQ1 TTLL6 AK9 AGBL2 RSPH10B

3.94e-091925572d8d5a38e205339eda9c8aca1ca9ba3dcbe5ae56
ToppCell(09)_Interm._secr.>cil.|World / shred by cell type by condition

CCDC170 RSPH10B2 FHAD1 LRRIQ1 AK9 AGBL2 RSPH10B

5.23e-092005573305e14dba12e94da42f0414fdc7a2c8caf0a183
ToppCellE16.5-Epithelial-Epithelial_Airway-Ciliated/Deuterosomal-Ciliated-Ciliated_mature|E16.5 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif

CCDC170 FHAD1 LRRIQ1 TTLL6 AK9 RSPH10B

6.17e-08168556fa7c0303918cea04e3f4c4f3cb079be19004d214
ToppCellE16.5-Epithelial-Epithelial_Airway-Ciliated/Deuterosomal-Ciliated|E16.5 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif

CCDC170 FHAD1 LRRIQ1 TTLL6 AK9 RSPH10B

6.17e-081685567edcab103c69e928d5c19a0d218ffb3ae32f9e70
ToppCellPND07-28-samps-Epithelial-Epithelial-non_alveolar-Ciliated_cell_of_lung_parenchyma|PND07-28-samps / Age Group, Lineage, Cell class and subclass

CCDC170 FHAD1 LRRIQ1 TTLL6 AGBL2 RSPH10B

7.60e-08174556f41d05a3703d7092bd3c4a97c15ae13069aaa4ad
ToppCellPND07-28-samps-Epithelial-Epithelial-non_alveolar|PND07-28-samps / Age Group, Lineage, Cell class and subclass

CCDC170 FHAD1 LRRIQ1 TTLL6 AGBL2 RSPH10B

7.86e-08175556c01a15b2084da4a18f8ff3623f44eb9dfe499f10
ToppCellEpithelial-Epithelial-D_(Ciliated)|Epithelial / shred on cell class and cell subclass (v4)

CCDC170 FHAD1 LRRIQ1 TTLL6 AK9 RSPH10B

1.20e-071885568f30535a32968a81a304315a49c0d90a77d36948
ToppCellPND07-Epithelial-Epithelial_Airway-Ciliated/Deuterosomal-Ciliated-Ciliated_mature|PND07 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif

CCDC170 FHAD1 LRRIQ1 TTLL6 AK9 RSPH10B

1.24e-07189556057d7a03fdbe779122b203619a6f947f49b84d28
ToppCellPND10-Epithelial-Epithelial_Airway-Ciliated/Deuterosomal-Ciliated-Ciliated_mature|PND10 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif

CCDC170 FHAD1 LRRIQ1 TTLL6 AK9 RSPH10B

1.24e-0718955602c6128a9ab5818e0881dcadafdad5f08b9a67cf
ToppCellPND10-Epithelial-Epithelial_Airway-Ciliated/Deuterosomal-Ciliated|PND10 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif

CCDC170 FHAD1 LRRIQ1 TTLL6 AK9 RSPH10B

1.24e-07189556164ea92ff6a1aa2ead1c9b8f64f99a9d65437232
ToppCellPND07-Epithelial-Epithelial_Airway-Ciliated/Deuterosomal|PND07 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif

CCDC170 FHAD1 LRRIQ1 TTLL6 AK9 RSPH10B

1.24e-071895569f57a131902d23494bf389baf6e6e2d99f88b2c8
ToppCellEpithelial-D_(Ciliated)|World / shred on cell class and cell subclass (v4)

CCDC170 FHAD1 LRRIQ1 TTLL6 AK9 RSPH10B

1.24e-071895560bf560b595c7a8450a46bc821b742b67965bd9f9
ToppCellPND07-Epithelial-Epithelial_Airway-Ciliated/Deuterosomal-Ciliated|PND07 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif

CCDC170 FHAD1 LRRIQ1 TTLL6 AK9 RSPH10B

1.24e-07189556e443b02502edaefa94567a9e8af5756e8e11ff30
ToppCellPND14-Epithelial-Epithelial_Airway-Ciliated/Deuterosomal|PND14 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif

CCDC170 FHAD1 LRRIQ1 TTLL6 AK9 RSPH10B

1.28e-0719055635248a8be476ea8d06d67c3d98a25be1f7c150b7
ToppCellPND14-Epithelial-Epithelial_Airway-Ciliated/Deuterosomal-Ciliated-Ciliated_mature|PND14 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif

CCDC170 FHAD1 LRRIQ1 TTLL6 AK9 RSPH10B

1.28e-071905565f5206f9e725070d865f4c891ff08bb750e58582
ToppCellPND14-Epithelial-Epithelial_Airway-Ciliated/Deuterosomal-Ciliated|PND14 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif

CCDC170 FHAD1 LRRIQ1 TTLL6 AK9 RSPH10B

1.28e-07190556088e3f39a1e5e11354d6e7458e8e6a39f14936b3
ToppCellTracheal-NucSeq-Epithelial-Epi_airway_ciliated-Deuterosomal|NucSeq / Cell types per location group and 10X technology with lineage, and cell group designations

CCDC170 RSPH10B2 FHAD1 LRRIQ1 TOP2A RSPH10B

1.63e-07198556f31790442ef142f1c0c49bf3daf2d0efb193d2c9
ToppCell(09)_Interm._secr.>cil.-(2)_GFP_FOXI1|(09)_Interm._secr.>cil. / shred by cell type by condition

FHAD1 LRRIQ1 ATRX TNRC6B NIPBL LARP7

1.68e-07199556fc680f85ebd3bab4c72876a19a461b0afb5f51ce
ToppCellLPS_IL1RA_TNF-Epithelial_airway-airway_epithelial-Ciliated|LPS_IL1RA_TNF / Treatment groups by lineage, cell group, cell type

CCDC170 FHAD1 LRRIQ1 TTLL6 AK9 RSPH10B

1.73e-0720055696701a4d57753f5ec0dd5c7550054bbcc946bc5f
ToppCellLPS_IL1RA-Epithelial_airway-airway_epithelial-Ciliated|LPS_IL1RA / Treatment groups by lineage, cell group, cell type

CCDC170 FHAD1 LRRIQ1 TTLL6 AK9 RSPH10B

1.73e-072005564992dbf0514d674017315dbd20d91dfec0c608e9
ToppCellTracheal-NucSeq-Epithelial-Epi_airway_ciliated|NucSeq / Cell types per location group and 10X technology with lineage, and cell group designations

CCDC170 RSPH10B2 FHAD1 LRRIQ1 AGBL2 RSPH10B

1.73e-0720055673ac1cf40ddd764be1100cbfaaa29563665457d8
ToppCell3'-Broncho-tracheal-Epithelial-Airway_ciliated-ciliated_columnar_cell_of_tracheobronchial_tree-Multiciliated_(non-nasal)-Multiciliated_(non-nasal)_L.0.3.0.2|3' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5

CCDC170 FHAD1 LRRIQ1 AK9 AGBL2

2.11e-0616955514aadc2d1bf66eb47dac33b4d61ddb3c942caa4f
ToppCellTCGA-Brain-Primary_Tumor-Low_Grade_Glioma|TCGA-Brain / Sample_Type by Project: Shred V9

TAF3 SCAPER MYO18A TNRC6B CHD2

2.64e-06177555e8ab340b20cd41554c3841fe980e078e878af35f
ToppCell5'-Airway_Nasal-Epithelial-Airway_ciliated-multi-ciliated_epithelial_cell-Deuterosomal|5' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5

CCDC170 LRRIQ1 SSRP1 CCDC171 TOP2A

2.79e-06179555d15182c668d7c37be8214cad9f1fe35d1409c9a1
ToppCell5'-Airway_Nasal-Epithelial-Airway_ciliated-multi-ciliated_epithelial_cell-Deuterosomal-Deuterosomal_L.0.3.4.0|5' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5

CCDC170 LRRIQ1 SSRP1 CCDC171 TOP2A

2.79e-06179555e22a275a7c0ed19113c833a75d6c49fcc19aa13a
ToppCellE18.5-Epithelial-Epithelial_Airway-Ciliated/Deuterosomal-Ciliated|E18.5 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif

CCDC170 FHAD1 LRRIQ1 AK9 RSPH10B

3.19e-06184555797b6a6d6f6aafae98f75ca8bffe8263f8d3ff9b
ToppCellE18.5-Epithelial-Epithelial_Airway-Ciliated/Deuterosomal-Ciliated-Ciliated_mature|E18.5 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif

CCDC170 FHAD1 LRRIQ1 AK9 RSPH10B

3.19e-0618455577d5b60a20b277f589b18f7a131142a7ef2dac17
ToppCellPND14-Epithelial-Epithelial_Airway|PND14 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif

FHAD1 LRRIQ1 TTLL6 AK9 RSPH10B

3.46e-061875551399c703505211c510b3f14c7a2aa9930566c473
ToppCellPND28-Epithelial-Epithelial_Airway|PND28 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif

FHAD1 LRRIQ1 TTLL6 AK9 RSPH10B

3.46e-06187555f777dd5eb5ccd554ebe1ed60a738b5dd45e18bb9
ToppCell21-Trachea-Epithelial-Intermediate_ciliated|Trachea / Age, Tissue, Lineage and Cell class

CCDC170 FHAD1 LRRIQ1 TXLNB AGBL2

3.46e-061875551a2178a195d078d1963947b327c6d0d4f2f48341
ToppCellP15-Epithelial-airway_epithelial_cell-club_cell|P15 / developmental_time, Lineage, Cell group, Cell type, Cell type_cellcyc-phase

CCDC170 FHAD1 LRRIQ1 AK9 AGBL2

3.46e-06187555a70aaae32426e9ddb1cbfbd0e0db24ccc96b9f40
ToppCellP15-Epithelial-airway_epithelial_cell|P15 / developmental_time, Lineage, Cell group, Cell type, Cell type_cellcyc-phase

CCDC170 FHAD1 LRRIQ1 AK9 AGBL2

3.55e-06188555e3e71c0f2e374330620cb4d27638953ffa9f5298
ToppCelldroplet-Tongue-nan|Tongue / Tongue_Heart_Limb_Muscle_Aorta_Diaphragm - method, tissue, subtissue, age, lineage, cell ontology and free annotation

ATRX SEC62 CHD2 NIPBL ESF1

3.55e-06188555d62cc37e86b7b186e53aeb7f421c4e5ee28f23bd
ToppCellPND28-Epithelial-Epithelial_Airway-Ciliated/Deuterosomal-Ciliated-Ciliated_mature|PND28 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif

FHAD1 LRRIQ1 TTLL6 AK9 RSPH10B

3.64e-06189555fa1ff8b7fa53f3148d9117d6e598097f03af5eb2
ToppCellPND10-Epithelial-Epithelial_Airway|PND10 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif

FHAD1 LRRIQ1 TTLL6 AK9 RSPH10B

3.64e-06189555407d8a59969d83f014600aae1a55092283a13970
ToppCellPND28-Epithelial-Epithelial_Airway-Ciliated/Deuterosomal|PND28 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif

FHAD1 LRRIQ1 TTLL6 AK9 RSPH10B

3.64e-06189555565063f9e3dd79164321f8a394bd12c176baf202
ToppCellPND28-Epithelial-Epithelial_Airway-Ciliated/Deuterosomal-Ciliated|PND28 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif

FHAD1 LRRIQ1 TTLL6 AK9 RSPH10B

3.64e-06189555497be236848ebf5ad75d1f0c71e6261f5d3521da
ToppCellE18.5-Epithelial-Epithelial_Airway|E18.5 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif

FHAD1 LRRIQ1 TTLL6 AK9 RSPH10B

3.73e-061905555c012935ea5e35a2d0d08ea7dc04ffbe3c2a10ac
ToppCellASK428-Epithelial-Ciliated|ASK428 / Donor, Lineage and Cell class of Lung cells from Dropseq

CCDC170 FHAD1 LRRIQ1 AK9 AGBL2

3.83e-061915550c4b926a28bc94f3cf4d68a911c0a189f6ff505e
ToppCellE18.5-Epithelial-Epithelial_Airway-Ciliated/Deuterosomal|E18.5 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif

FHAD1 LRRIQ1 TTLL6 AK9 RSPH10B

3.83e-06191555acd844b477a069b2dcf07b2998e1b5c87dc0eb94
ToppCell15-Trachea-Epithelial-Intermediate_ciliated|Trachea / Age, Tissue, Lineage and Cell class

CCDC170 FHAD1 LRRIQ1 TXLNB RSPH10B

3.93e-061925559cbe961a800c981cdc742a47ed18e9c8eb6430bd
ToppCellwk_20-22-Epithelial-Proximal_epithelial-MUC16+_ciliated|wk_20-22 / Celltypes from embryonic and fetal-stage human lung

CCDC170 FHAD1 LRRIQ1 AGBL2 RSPH10B

4.13e-06194555756082a0f5953b52229bb60d40b84701cb6cb23d
ToppCell3'-Airway_Nasal-Epithelial-Airway_ciliated-ciliated_columnar_cell_of_tracheobronchial_tree|3' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5

CCDC170 FHAD1 LRRIQ1 CCDC80 AK9

4.24e-06195555649fd2336e963f6a150d182a53ad5dd838ca80b1
ToppCell3'-Airway_Nasal-Epithelial-Airway_ciliated-ciliated_columnar_cell_of_tracheobronchial_tree-Multiciliated_(non-nasal)|3' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5

CCDC170 FHAD1 LRRIQ1 CCDC80 AK9

4.24e-06195555129ad5f4253ecb1a8477cc38773e6e91ea9570b0
ToppCell3'-Airway_Nasal-Epithelial-Airway_ciliated-ciliated_columnar_cell_of_tracheobronchial_tree-Multiciliated_(non-nasal)-Multiciliated_(non-nasal)_L.0.3.0.0|3' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5

CCDC170 FHAD1 LRRIQ1 CCDC80 AK9

4.24e-061955553e70ee987d66d450062d5df3d7c733ccc7344470
ToppCellControl_saline-Epithelial_airway-airway_epithelial-Ciliated|Control_saline / Treatment groups by lineage, cell group, cell type

FHAD1 LRRIQ1 TTLL6 AK9 RSPH10B

4.24e-0619555560067b5359174f0d1a8b5748bfc0690762e9e740
ToppCell(11)_FOXN4+-(2)_GFP_FOXI1|(11)_FOXN4+ / shred by cell type by condition

TAF3 LRRIQ1 ATRX CCDC47 NIPBL

4.57e-0619855576d40b8c2f8399725b3a62ee2ae0896559cf91eb
ToppCellLPS_anti-TNF-Epithelial_airway-airway_epithelial-Ciliated|LPS_anti-TNF / Treatment groups by lineage, cell group, cell type

CCDC170 FHAD1 LRRIQ1 TTLL6 AK9

4.68e-0619955515f7814b7074170eee7ccacaa670b1d128fc68bb
ToppCellTracheal-10x5prime-Epithelial-Epi_airway_ciliated|10x5prime / Cell types per location group and 10X technology with lineage, and cell group designations

CCDC170 RSPH10B2 FHAD1 LRRIQ1 AGBL2

4.79e-0620055531d75c26055177d656df1fbb10b764cebd61e122
ToppCellTracheal-NucSeq-Epithelial-Epi_airway_ciliated-Ciliated|NucSeq / Cell types per location group and 10X technology with lineage, and cell group designations

CCDC170 RSPH10B2 FHAD1 LRRIQ1 AGBL2

4.79e-06200555af6a551f83808c1c839df7ba7b1702ca28ea6e1b
ToppCellBrain_organoid-organoid_Tanaka_cellReport-3m-Mesenchymal-Unfolded_protein_responsible_cell|3m / Sample Type, Dataset, Time_group, and Cell type.

CCDC47 DDX18 MPHOSPH10 CWC25 LRIF1

4.79e-06200555e68e44ab57d17ac4845d9e3798814d048d79e888
ToppCellTracheal-10x5prime-Epithelial-Epi_airway_ciliated-Ciliated|10x5prime / Cell types per location group and 10X technology with lineage, and cell group designations

CCDC170 RSPH10B2 FHAD1 LRRIQ1 AGBL2

4.79e-06200555e1dce91c6c531bb212002a14705e496d77ad3490
ToppCellLPS-antiTNF-Epithelial_airway-Ciliated_cells-Ciliated|LPS-antiTNF / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2

CCDC170 FHAD1 LRRIQ1 TTLL6

3.37e-05148554d61123f0c811287843d066b932b4a9ff09c07c5b
ToppCellLPS-antiTNF-Epithelial_airway-Ciliated_cells|LPS-antiTNF / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2

CCDC170 FHAD1 LRRIQ1 TTLL6

3.37e-05148554c8e93b87212f55774223caa385859c566fa1981f
ToppCellPND01-Epithelial-Epithelial_Airway-Ciliated/Deuterosomal-Deuterosomal-Deuterosomal_mature|PND01 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif

FHAD1 LRRIQ1 TTLL6 AK9

3.64e-05151554633ed52dd3b4cf1e87432cf0a1ca187d7b204e83
ToppCellPND01-Epithelial-Epithelial_Airway-Ciliated/Deuterosomal-Deuterosomal|PND01 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif

FHAD1 LRRIQ1 TTLL6 AK9

3.64e-05151554e335dad89e0a44cdd302b9653154ba5d1ee5fe1a
ToppCellHippocampus-Macroglia-CSF_related|Hippocampus / BrainAtlas - Mouse McCarroll V32

CCDC170 TTLL6 AK9 AGBL2

3.73e-05152554c2b6cc41546cbd46b9ea5d28a7c66f6330a27df2
ToppCellControl-Epithelial_airway-Ciliated_cells|Control / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2

CCDC170 FHAD1 LRRIQ1 TTLL6

3.93e-051545547556a4b2b062da5ae7ec2bbb66e745e7662db628
ToppCellControl-Epithelial_airway-Ciliated_cells-Ciliated|Control / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2

CCDC170 FHAD1 LRRIQ1 TTLL6

3.93e-051545544e3bc24043144143842627cacf6f90dda2228910
ToppCellNS-moderate-d_07-13-Epithelial-FOXN4+|d_07-13 / Location, Severity, dps_group, Lineage and Cell class of Upper airway (combined)

RSPH10B2 LRRIQ1 AK9 CCDC171

4.24e-05157554410c9d74a2085179cfb39853cb6d330fa98c9c1b
ToppCellTCGA-Brain-Primary_Tumor-Low_Grade_Glioma-Oligoastrocytoma|TCGA-Brain / Sample_Type by Project: Shred V9

TAF3 SCAPER MYO18A PLCB1

4.67e-05161554347edb0de10850b7d16c40945751033289289c9b
ToppCellrenal_medulla_nuclei-Renal_AKI_(acute_kidney_injury)-Epithelial-Proximal_tubule_epithelial_cell-kidney_proximal_tubule_epithelial_cell_cycling-Cycling_Proximal_Tubule_Epithelial_Cell_low-phase|Renal_AKI_(acute_kidney_injury) / Celltypes from Cells and Nuclei per compartment and clinical group

BRPF1 TOP2A SDAD1 DDX10

5.26e-0516655443f84d3cd58e93ce00c241656c4cba27604b4932
ToppCell15-Distal-Epithelial-Multiciliated_cell|Distal / Age, Tissue, Lineage and Cell class

CCDC170 RSPH10B2 FHAD1 AGBL2

5.64e-05169554425d89ab69e9f9eb3df84056676423e390cc6ab1
ToppCell5'-Parenchyma_lung-Epithelial-Airway_ciliated-ciliated_columnar_cell_of_tracheobronchial_tree-Multiciliated_(non-nasal)-Multiciliated_(non-nasal)_L.0.3.2.2|5' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5

FHAD1 LRRIQ1 AK9 RSPH10B

5.64e-05169554fba841664939c771881ba97f14ef1df6635c04ff
ToppCellControl-Stromal_mesenchymal-Lung_smooth_muscle-Pericyte_3|Control / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2

CCDC80 PDZRN3 PMFBP1 PDZRN4

5.91e-051715544ede831aed364cb5271f49a8b09bb6d0452f9b35
ToppCellwk_20-22-Epithelial-Proximal_epithelial-Deuterosomal|wk_20-22 / Celltypes from embryonic and fetal-stage human lung

LRRIQ1 AK9 CCDC171 RSPH10B

5.91e-0517155452aec5f6677fe2f7a36fb5b18117a4cffaeff58f
ToppCellwk_08-11-Epithelial-Proximal_epithelial-Deuterosomal|wk_08-11 / Celltypes from embryonic and fetal-stage human lung

CCDC170 FHAD1 TTLL6 RSPH10B

6.04e-0517255408ad76412c9cc3504141797b44b88478ced87476
ToppCellPND10-Epithelial-Epithelial_Airway-Ciliated/Deuterosomal-Deuterosomal|PND10 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif

LRRIQ1 TTLL6 AGBL2 CCDC171

6.60e-05176554d6d7e4e937d49a5c0d16322c8dd3bf9e97eb8732
ToppCell5'-Airway_Nasal-Epithelial-Airway_ciliated-ciliated_columnar_cell_of_tracheobronchial_tree-Multiciliated_(non-nasal)-|5' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5

CCDC170 FHAD1 AK9 RSPH10B

6.60e-0517655487de432c680b80555342afac864599bbc002c040
ToppCellPND10-Epithelial-Epithelial_Airway-Ciliated/Deuterosomal-Deuterosomal-Deuterosomal_mature|PND10 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif

LRRIQ1 TTLL6 AGBL2 CCDC171

6.60e-05176554c03d80df2550c0d2b0452326480d6bf21d20fdd2
ToppCell15-Airway-Epithelial-Multiciliated_precursor|Airway / Age, Tissue, Lineage and Cell class

CCDC170 RSPH10B2 LRRIQ1 TTLL6

6.90e-05178554d8e0a696bdd6af6422d72af0413f9dbd6bc02afa
ToppCell5'-Parenchyma_lung-Epithelial-Airway_ciliated-ciliated_columnar_cell_of_tracheobronchial_tree-Multiciliated_(non-nasal)-Multiciliated_(non-nasal)_L.0.3.3.0|5' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5

FHAD1 LRRIQ1 TTLL6 AK9

7.05e-051795545e5f1cdf4aa66868d45b74ba91e20e848a3cbaff
ToppCell5'-Airway_Nasal-Epithelial-Airway_ciliated-multi-ciliated_epithelial_cell-Multiciliated_(nasal)-Multiciliated_(nasal)_L.0.3.1.1|5' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5

CCDC170 FHAD1 LRRIQ1 CCDC80

7.21e-051805541f1af4474f3f0ac3c0d6b1a6c875c354d36d8eec
ToppCell10x5'-Liver-Lymphocytic_T_CD4-T_CD4/CD8|Liver / Manually curated celltypes from each tissue

UBR5 PLCB1 TNRC6B CHD2

7.36e-05181554f2315414e714ac86211546a935660c4be6e85f1b
ToppCellControl-Epithelial_cells-Airway_ciliated|Control / group, cell type (main and fine annotations)

CCDC170 FHAD1 LRRIQ1 AGBL2

7.52e-05182554fb725d10d9ed25dfc6d5bb69cfef78513f7d3e8f
ToppCellcellseq-Epithelial-Epithelial_Airway-Ciliated/Deuterosomal-Deuterosomal|cellseq / Celltype signatures by Technology, Lineage, Lineage_subclass, Celltype_group, Cell_type2

CCDC170 LRRIQ1 CCDC171 TOP2A

7.52e-05182554deb53a4f84e4cd5c3b4180a4ac43249da9d738f7
ToppCellCiliated_cells-B-Donor_04|World / lung cells shred on cell class, cell subclass, sample id

CCDC170 FHAD1 LRRIQ1 CCDC80

7.52e-05182554e93968f800bfeb258e4e834fc8bf92d1cb72cd73
ToppCellE17.5-Epithelial-airway_epithelial_cell|E17.5 / developmental_time, Lineage, Cell group, Cell type, Cell type_cellcyc-phase

FHAD1 LRRIQ1 TTLL6 AK9

7.68e-0518355407cebb0e186e1bff14ac2a6bb6f8412d4aaa2350
ToppCellE17.5-Epithelial-airway_epithelial_cell-club_cell|E17.5 / developmental_time, Lineage, Cell group, Cell type, Cell type_cellcyc-phase

FHAD1 LRRIQ1 TTLL6 AK9

7.68e-05183554e8e85e5be909f9cd85a6a041190bfcb855dfa1a4
ToppCellP07-Epithelial-airway_epithelial_cell|P07 / developmental_time, Lineage, Cell group, Cell type, Cell type_cellcyc-phase

FHAD1 LRRIQ1 TTLL6 AK9

7.85e-05184554a5e7af3392e9d6ddad0397f1eeb6b91ed1107cc2
ToppCellP07-Epithelial-airway_epithelial_cell-club_cell|P07 / developmental_time, Lineage, Cell group, Cell type, Cell type_cellcyc-phase

FHAD1 LRRIQ1 TTLL6 AK9

7.85e-05184554ab469b9e06212462cbe2e4db8775c6778db855e6
ToppCellCiliated_cells-B-Myositis-ILD_01|World / lung cells shred on cell class, cell subclass, sample id

CCDC170 LRRIQ1 AGBL2 RSPH10B

8.01e-05185554f012c243343e1d1956db19b34d062e9b13de2b2a
ToppCell15-Airway-Epithelial-Multiciliated_cell|Airway / Age, Tissue, Lineage and Cell class

CCDC170 FHAD1 LRRIQ1 AGBL2

8.01e-051855540998b6bf44287eebbf39249fff23fc3689e44c4e
ToppCellCiliated_cells-A-Donor_04|World / lung cells shred on cell class, cell subclass, sample id

CCDC170 FHAD1 LRRIQ1 TTLL6

8.01e-05185554d77ca57b02125a3a57a37f4aed20c89803b7d551
ToppCellP28-Epithelial-airway_epithelial_cell-club_cell|P28 / developmental_time, Lineage, Cell group, Cell type, Cell type_cellcyc-phase

FHAD1 LRRIQ1 TTLL6 AK9

8.18e-05186554a26811481668fa25c48a064a56c198685693ad8d
ToppCellP28-Epithelial-airway_epithelial_cell|P28 / developmental_time, Lineage, Cell group, Cell type, Cell type_cellcyc-phase

FHAD1 LRRIQ1 TTLL6 AK9

8.18e-05186554df80f101954b8ec6ccdb03e702de22e70b65181f
ToppCellfacs-Lung-EPCAM-3m-Epithelial-Ciliated_cell|Lung / Lung_Trachea - method, tissue, subtissue, age, lineage, cell ontology and free annotation

CCDC170 FHAD1 LRRIQ1 TTLL6

8.35e-0518755404dba2ed09ee4180830bdf0191921696697ea234
ToppCelltumor_Lung-Epithelial_cells-tS3|Epithelial_cells / Location, Cell class and cell subclass

CCDC170 FHAD1 LRRIQ1 AK9

8.35e-051875543cea677279e71fdb9879530dea10a5e6393beacd
ToppCellfacs-Lung-EPCAM-3m-Epithelial-ciliated_columnar_cell_of_tracheobronchial_tree|Lung / Lung_Trachea - method, tissue, subtissue, age, lineage, cell ontology and free annotation

CCDC170 FHAD1 LRRIQ1 TTLL6

8.35e-05187554805dafe22f835ece4dd091d8030d0a63b52a48dd
ToppCell10x5'-GI_small-bowel-Lymphocytic_T_CD4-T_CD4/CD8|GI_small-bowel / Manually curated celltypes from each tissue

PLCB1 TNRC6B CHD2 NIPBL

8.52e-05188554ab9b725d6e0cdab8e9ddda6dee09e14730e9a578
ToppCell21-Trachea-Epithelial-Multiciliated_cell|Trachea / Age, Tissue, Lineage and Cell class

CCDC170 FHAD1 LRRIQ1 AGBL2

8.52e-05188554803bf76a85b3033d2a04b08dd2c03ce9c15529ba
ComputationalNeighborhood of RFC3

MCM3 SSRP1 TOP2A

1.95e-0441303GNF2_RFC3
ComputationalNeighborhood of RFC4

MCM3 SSRP1 TOP2A

6.03e-0460303GNF2_RFC4
ComputationalNeighborhood of MCM5

MCM3 SSRP1 TOP2A

6.33e-0461303GNF2_MCM5
ComputationalNeighborhood of RFC4

DDX18 MCM3 SSRP1 TOP2A

7.72e-04151304MORF_RFC4
ComputationalNeighborhood of RBBP6

GTF3A DDX18 ESF1

9.47e-0470303GNF2_RBBP6
ComputationalGenes in the cancer module 197.

BRPF1 MCM3 ATF4 SSRP1

1.31e-03174304MODULE_197
ComputationalGenes in the cancer module 198.

MYO18A MCM3 ATF4 SSRP1 TOP2A

1.37e-03303305MODULE_198
ComputationalNeighborhood of SMC4L1

MCM3 SSRP1 TOP2A

1.61e-0384303GNF2_SMC4L1
ComputationalResponse to DNA damage.

MYO18A MCM3 TOP2A DDX10

1.71e-03187304MODULE_244
ComputationalNeighborhood of RRM1

MCM3 SSRP1 TOP2A

1.83e-0388303GNF2_RRM1
ComputationalNeighborhood of CCNI

BAZ2A SRP14 ATF4

1.83e-0388303MORF_CCNI
DiseaseUterine leiomyoma, estrogen-receptor negative breast cancer

TNRC6B DDX10

1.36e-0410522EFO_1000650, HP_0000131
DiseaseHematopoetic Myelodysplasia

ATRX PLCB1

1.20e-0329522C2713368
Diseasebitter alcoholic beverage consumption measurement

SCAPER TNRC6B AGBL2

1.68e-03133523EFO_0010092
Diseasevolumetric bone mineral density

CCDC170 FHAD1

2.51e-0342522EFO_0007620
DiseaseNeuroblastoma

ATRX TOP2A

3.13e-0347522C0027819
Diseasecorpus callosum posterior volume measurement

TNRC6B PDZRN4

3.82e-0352522EFO_0010298
Diseasehearing threshold measurement, hearing measurement

TAF3 MYO18A

5.22e-0361522EFO_0007616, EFO_0007618
DiseaseMYELODYSPLASTIC SYNDROME

ATRX PLCB1

6.26e-0367522C3463824
DiseaseMalignant Glioma

ATRX TOP2A

6.81e-0370522C0555198
Diseasemixed gliomas

ATRX TOP2A

6.81e-0370522C0259783

Protein segments in the cluster

PeptideGeneStartEntry
LLQMSLEKKEKKKKK

CWC25

166

Q9NXE8
DKAKIAKSKKKMRQK

BAZ2A

706

Q9UIF9
KVKREKKEKVKMKEK

BAZ2A

771

Q9UIF9
AKVKGEKLDKKLKKM

ATF4

271

P18848
EKKQEEAKMKKKTFK

CCDC171

781

Q6TFL3
KLLKSEKQMKKSEKK

CCDC80

561

Q76M96
EKQMKKSEKKSKQEK

CCDC80

566

Q76M96
SHKKMMKKRNKKIFD

PDZRN3

1021

Q9UPQ7
SHKKMMKKRNKKILD

PDZRN4

991

Q6ZMN7
MVKEKKKADKKGEKS

RSPH10B

1

P0C881
MVKEKKKADKKGEKS

RSPH10B2

1

B2RC85
KAKTNKKMDHIKKRK

LRIF1

631

Q5T3J3
WSKQKAKKEKKKKMN

DDX55

521

Q8NHQ9
AKKEKKKKMNEKRKR

DDX55

526

Q8NHQ9
KKLEKKQMKMKQIKV

CCDC47

466

Q96A33
KKKKKQLMKKKELIE

ESF1

736

Q9H501
KEKKEKKEKKERMSA

MYO18A

16

Q92614
RKQKKQKKMKLGKDE

NIPBL

321

Q6KC79
SEVARKMKKKEKQKK

NIPBL

1166

Q6KC79
KMKKKEKQKKRKAYE

NIPBL

1171

Q6KC79
KKYQKRMKIKEKEKR

MPHOSPH10

581

O00566
MQINDAKKTEKKKKK

MPHOSPH10

656

O00566
KKKKKGRMKKEDNIQ

LARP7

221

Q4G0J3
AKKKMKSKKKVEQPV

KNOP1

266

Q1ED39
NRQMIMMKKKKKKKK

PCDH11X

861

Q9BZA7
ESKKKKKKKRKMVND

DDX18

106

Q9NVP1
KKLKNRETKNKKDMK

NAT10

1006

Q9H0A0
AQKMKSKKLKKKIDS

LRRIQ1

1561

Q96JM4
EKKLLAKKMKLEQKK

PRKRIP1

136

Q9H875
QRKVQKQKKMQEKKK

PASD1

506

Q8IV76
KQKKMQEKKKLQEQK

PASD1

511

Q8IV76
KKKKEKMVSAAFMKK

MCM3

556

P25205
EKKKPSDFKKKVIKM

ATRX

991

P46100
KRKAKEAMEKEKKKV

FHAD1

806

B1AJZ9
SPMKKKQKKKENKEN

CHD2

1386

O14647
KQKKKENKENKEKQM

CHD2

1391

O14647
ADELTQKKKMFKKKK

AGBL2

736

Q5U5Z8
EKMKEKAEKKLMSVK

CCDC170

591

Q8IYT3
KKMTKVAEAKKVMKR

DDX10

666

Q13206
KMYACKKLQKKRIKK

GRK4

211

P32298
QKNKKKAKKIKARMN

SCAPER

866

Q9BY12
NKKLKKEIEEKKMKA

PMFBP1

936

Q8TBY8
KKELKTKMKKKEKQR

TAF3

526

Q5VWG9
KQKKKLERKKLIKDM

AK9

1171

Q5TCS8
KMKKHKNKSEAKKRK

UTP20

2746

O75691
RKNLEGKLKKKKMAK

TNP2

106

Q05952
KKLEKAMKVLKKQKK

SDAD1

261

Q9NVU7
KRKQLKKAKMAKDRK

SSRP1

516

Q08945
EKVKKAKAKSRIKMK

BRPF1

481

P55201
KVMKMKYDKDIKKEK

SEC62

96

Q99442
MDGLKKRDKKNKTKK

SRP14

91

P37108
KREKKPFQMKKKVEM

TTLL6

491

Q8N841
KKRKMVEMLEKKRKK

PAK1IP1

371

Q9NWT1
VEMLEKKRKKKKIKT

PAK1IP1

376

Q9NWT1
KELKKKMDKKRQEKI

PLCB1

1066

Q9NQ66
RNQKKKMKKRVKDEL

ZNFX1

891

Q9P2E3
EMKAEAEKKNKKKIK

TOP2A

1226

P11388
REKMKQKKFDKKVKE

XPA

211

P23025
KKMKLKVKKSREKRS

GTF3A

306

Q92664
QEMDKTTKKMKKLEK

TXLNB

386

Q8N3L3
KKEIQKKMDKKMKKA

WDR3

311

Q9UNX4
KKMDKKMKKARKKAK

WDR3

316

Q9UNX4
KLRSMKERKLEKKKQ

WASH6P

361

Q9NQA3
QLMEDKKRKKEDKKK

TNRC6B

11

Q9UPQ9
QRKKMLEKARAKNKK

UBR5

501

O95071