Cluster composition

Functions

Category	Name	IntersectionWithQuery	PValue	GenesInTerm	GenesInQuery	GenesInTermInQuery	ID
GeneOntologyBiologicalProcess	positive regulation of mRNA splicing, via spliceosome	RBMY1D RBMY1B RBMY1E RBMXL2 RBMXL3 RBMY1A1 RBMY1C RBMY1F	4.93e-15	44	35	8	GO:0048026
GeneOntologyBiologicalProcess	positive regulation of mRNA processing	RBMY1D RBMY1B RBMY1E RBMXL2 RBMXL3 RBMY1A1 RBMY1C RBMY1F	1.25e-14	49	35	8	GO:0050685
GeneOntologyBiologicalProcess	regulation of RNA splicing	RBMY1D RBMY1B RBMY1E RBMXL2 RBMXL3 CWC22 CLK2 CLK3 RBMY1A1 RBMY1C RBMY1F	2.69e-14	207	35	11	GO:0043484
GeneOntologyBiologicalProcess	positive regulation of RNA splicing	RBMY1D RBMY1B RBMY1E RBMXL2 RBMXL3 RBMY1A1 RBMY1C RBMY1F	1.05e-13	63	35	8	GO:0033120
GeneOntologyBiologicalProcess	regulation of mRNA splicing, via spliceosome	RBMY1D RBMY1B RBMY1E RBMXL2 RBMXL3 CWC22 RBMY1A1 RBMY1C RBMY1F	6.79e-13	129	35	9	GO:0048024
GeneOntologyBiologicalProcess	RNA splicing	RBMY1D RBMY1B RBMY1E RBMXL2 RBMXL3 CWC22 CLK2 CLK3 SRSF8 RBMY1A1 RBMY1C CLASRP RBMY1F	8.16e-13	502	35	13	GO:0008380
GeneOntologyBiologicalProcess	regulation of mRNA processing	RBMY1D RBMY1B RBMY1E RBMXL2 RBMXL3 CWC22 RBMY1A1 RBMY1C RBMY1F	4.30e-12	158	35	9	GO:0050684
GeneOntologyBiologicalProcess	mRNA splicing, via spliceosome	RBMY1D RBMY1B RBMY1E RBMXL2 RBMXL3 CWC22 SRSF8 RBMY1A1 RBMY1C RBMY1F	2.73e-10	358	35	10	GO:0000398
GeneOntologyBiologicalProcess	RNA splicing, via transesterification reactions with bulged adenosine as nucleophile	RBMY1D RBMY1B RBMY1E RBMXL2 RBMXL3 CWC22 SRSF8 RBMY1A1 RBMY1C RBMY1F	2.73e-10	358	35	10	GO:0000377
GeneOntologyBiologicalProcess	RNA splicing, via transesterification reactions	RBMY1D RBMY1B RBMY1E RBMXL2 RBMXL3 CWC22 SRSF8 RBMY1A1 RBMY1C RBMY1F	3.04e-10	362	35	10	GO:0000375
GeneOntologyBiologicalProcess	mRNA processing	RBMY1D RBMY1B RBMY1E RBMXL2 RBMXL3 CWC22 SRSF8 RBMY1A1 RBMY1C CLASRP RBMY1F	1.04e-09	551	35	11	GO:0006397
GeneOntologyBiologicalProcess	positive regulation of mRNA metabolic process	RBMY1D RBMY1B RBMY1E RBMXL2 RBMXL3 RBMY1A1 RBMY1C RBMY1F	9.74e-09	259	35	8	GO:1903313
GeneOntologyBiologicalProcess	regulation of mRNA metabolic process	RBMY1D RBMY1B RBMY1E RBMXL2 RBMXL3 CWC22 RBMY1A1 RBMY1C RBMY1F	3.86e-08	443	35	9	GO:1903311
GeneOntologyBiologicalProcess	mRNA metabolic process	RBMY1D RBMY1B RBMY1E RBMXL2 RBMXL3 CWC22 SRSF8 RBMY1A1 RBMY1C CLASRP RBMY1F	1.98e-07	917	35	11	GO:0016071
GeneOntologyBiologicalProcess	RNA processing	RBMY1D RBMY1B RBMY1E RBMXL2 RBMXL3 CWC22 CLK2 CLK3 SRSF8 RBMY1A1 RBMY1C CLASRP RBMY1F	4.90e-07	1500	35	13	GO:0006396
GeneOntologyBiologicalProcess	gonad development	RBMY1D RBMY1B RBMY1E PDE4D ADCYAP1 RBMY1A1	8.79e-06	292	35	6	GO:0008406
GeneOntologyBiologicalProcess	development of primary sexual characteristics	RBMY1D RBMY1B RBMY1E PDE4D ADCYAP1 RBMY1A1	9.68e-06	297	35	6	GO:0045137
GeneOntologyBiologicalProcess	positive regulation of gene expression	RBMY1D RBMY1B RBMY1E PDE4D RBMXL2 RBMXL3 RAB1A ADCYAP1 RBMY1A1 RBMY1C RBMY1F	1.68e-05	1446	35	11	GO:0010628
GeneOntologyBiologicalProcess	sex differentiation	RBMY1D RBMY1B RBMY1E PDE4D ADCYAP1 RBMY1A1	2.53e-05	352	35	6	GO:0007548
GeneOntologyBiologicalProcess	reproductive structure development	RBMY1D RBMY1B RBMY1E PDE4D ADCYAP1 RBMY1A1	4.06e-05	383	35	6	GO:0048608
GeneOntologyBiologicalProcess	reproductive system development	RBMY1D RBMY1B RBMY1E PDE4D ADCYAP1 RBMY1A1	4.36e-05	388	35	6	GO:0061458
GeneOntologyBiologicalProcess	male gonad development	RBMY1D RBMY1B RBMY1E RBMY1A1	1.95e-04	171	35	4	GO:0008584
GeneOntologyBiologicalProcess	development of primary male sexual characteristics	RBMY1D RBMY1B RBMY1E RBMY1A1	2.00e-04	172	35	4	GO:0046546
GeneOntologyBiologicalProcess	hematopoietic progenitor cell differentiation	RBMY1D RBMY1B RBMY1E RBMY1A1	3.35e-04	197	35	4	GO:0002244
GeneOntologyBiologicalProcess	male sex differentiation	RBMY1D RBMY1B RBMY1E RBMY1A1	3.48e-04	199	35	4	GO:0046661
GeneOntologyBiologicalProcess	growth hormone secretion	RAB1A ADCYAP1	6.33e-04	22	35	2	GO:0030252
GeneOntologyCellularComponent	spliceosomal complex	RBMY1D RBMY1B RBMY1E RBMXL2 RBMXL3 CWC22 RBMY1A1 RBMY1C RBMY1F	6.10e-11	215	35	9	GO:0005681
GeneOntologyCellularComponent	male germ cell nucleus	RBMY1D RBMY1B RBMY1E RBMY1A1	1.27e-05	86	35	4	GO:0001673
GeneOntologyCellularComponent	germ cell nucleus	RBMY1D RBMY1B RBMY1E RBMY1A1	3.72e-05	113	35	4	GO:0043073
GeneOntologyCellularComponent	ribonucleoprotein complex	RBMY1D RBMY1B RBMY1E RBMXL2 RBMXL3 CWC22 RBMY1A1 RBMY1C RBMY1F	1.15e-04	1194	35	9	GO:1990904
GeneOntologyCellularComponent	nuclear protein-containing complex	RBMY1D RBMY1B RBMY1E RBMXL2 RBMXL3 CWC22 RBMY1A1 RBMY1C RBMY1F	3.36e-04	1377	35	9	GO:0140513
GeneOntologyCellularComponent	nuclear speck	HOXA6 CWC22 CLK2 CLK3 SRSF8	7.10e-04	431	35	5	GO:0016607
GeneOntologyCellularComponent	U12-type spliceosomal complex	RBMXL2 RBMXL3	1.15e-03	30	35	2	GO:0005689
Domain	RBM1CTR	RBMY1D RBMY1B RBMY1E RBMXL2 RBMY1A1 RBMY1F	6.38e-16	8	34	6	PF08081
Domain	RBM1CTR	RBMY1D RBMY1B RBMY1E RBMXL2 RBMY1A1 RBMY1F	6.38e-16	8	34	6	IPR012604
Domain	RRM_1	RBMY1D RBMY1B RBMY1E RBMXL2 RBMXL3 SRSF8 RBMY1A1 EIF4B RBMY1F	9.13e-11	208	34	9	PF00076
Domain	RRM	RBMY1D RBMY1B RBMY1E RBMXL2 RBMXL3 SRSF8 RBMY1A1 EIF4B RBMY1F	1.33e-10	217	34	9	SM00360
Domain	RRM_dom	RBMY1D RBMY1B RBMY1E RBMXL2 RBMXL3 SRSF8 RBMY1A1 EIF4B RBMY1F	1.99e-10	227	34	9	IPR000504
Domain	RRM	RBMY1D RBMY1B RBMY1E RBMXL2 RBMXL3 SRSF8 RBMY1A1 EIF4B RBMY1F	2.24e-10	230	34	9	PS50102
Domain	Nucleotide-bd_a/b_plait	RBMY1D RBMY1B RBMY1E RBMXL2 RBMXL3 SRSF8 RBMY1A1 EIF4B RBMY1F	6.18e-10	258	34	9	IPR012677
Domain	-	RBMY1D RBMY1B RBMY1E RBMXL2 RBMXL3 SRSF8 EIF4B RBMY1F	1.02e-08	244	34	8	3.30.70.330
Domain	Homeobox_antennapedia	HOXA6 HOXC5	2.10e-04	12	34	2	IPR017995
Domain	Homeobox_Antennapedia_CS	HOXA6 HOXC5	6.61e-04	21	34	2	IPR001827
Domain	ANTENNAPEDIA	HOXA6 HOXC5	8.66e-04	24	34	2	PS00032
Domain	zf-RING_2	PJA2 PJA1	4.03e-03	52	34	2	PF13639
Domain	Homeobox_metazoa	HOXA6 HOXC5	1.17e-02	90	34	2	IPR020479
Pathway	WP_MRNA_PROCESSING	RBMY1D RBMY1B RBMY1E RBMXL2 RBMXL3 CLK2 CLK3 RBMY1A1 CLASRP	9.10e-08	451	27	9	MM15946
Pubmed	A Y chromosome gene family with RNA-binding protein homology: candidates for the azoospermia factor AZF controlling human spermatogenesis.	RBMY1D RBMY1B RBMY1E RBMY1A1 RBMY1C RBMY1F	4.62e-18	7	35	6	8269511
Pubmed	Structure and organization of the RBMY genes on the human Y chromosome: transposition and amplification of an ancestral autosomal hnRNPG gene.	RBMY1D RBMY1B RBMY1E RBMY1A1 RBMY1C RBMY1F	6.08e-16	12	35	6	9598316
Pubmed	RBMY, a male germ cell-specific RNA-binding protein, activated in human liver cancers and transforms rodent fibroblasts.	RBMY1D RBMY1B RBMY1E RBMY1A1 RBMY1F	4.59e-15	6	35	5	15184870
Pubmed	Degeneracy in human multicopy RBM (YRRM), a candidate spermatogenesis gene.	RBMY1D RBMY1B RBMY1E RBMY1A1 RBMY1F	1.61e-14	7	35	5	8875892
Pubmed	RBMY, a probable human spermatogenesis factor, and other hnRNP G proteins interact with Tra2beta and affect splicing.	RBMY1B RBMXL2 RBMY1A1 RBMY1C RBMY1F	9.80e-13	13	35	5	10749975
Pubmed	Human RBMY regulates germline-specific splicing events by modulating the function of the serine/arginine-rich proteins 9G8 and Tra2-{beta}.	RBMY1D RBMY1B RBMY1E RBMY1A1	4.29e-12	5	35	4	20016065
Pubmed	An RBM homologue maps to the mouse Y chromosome and is expressed in germ cells.	RBMY1D RBMY1B RBMY1E RBMY1A1	4.29e-12	5	35	4	8817321
Pubmed	The role of human and mouse Y chromosome genes in male infertility.	RBMY1D RBMY1B RBMY1E RBMY1A1	4.29e-12	5	35	4	11097427
Pubmed	Rapid evolution of mouse Y centromere repeat DNA belies recent sequence stability.	RBMY1D RBMY1B RBMY1E RBMY1A1	4.29e-12	5	35	4	19737860
Pubmed	Identification of target messenger RNA substrates for mouse RBMY.	RBMY1D RBMY1B RBMY1E RBMY1A1	1.29e-11	6	35	4	18492746
Pubmed	Meiotic sex chromosome inactivation in male mice with targeted disruptions of Xist.	RBMY1D RBMY1B RBMY1E RBMY1A1	1.29e-11	6	35	4	12356914
Pubmed	The behavior of the X- and Y-chromosomes in the oocyte during meiotic prophase in the B6.Y(TIR)sex-reversed mouse ovary.	RBMY1D RBMY1B RBMY1E RBMY1A1	1.29e-11	6	35	4	18239052
Pubmed	Does Rbmy have a role in sperm development in mice?	RBMY1D RBMY1B RBMY1E RBMY1A1	1.29e-11	6	35	4	15051956
Pubmed	Mouse homologues of the human AZF candidate gene RBM are expressed in spermatogonia and spermatids, and map to a Y chromosome deletion interval associated with a high incidence of sperm abnormalities.	RBMY1D RBMY1B RBMY1E RBMY1A1	1.29e-11	6	35	4	9499427
Pubmed	RNA-binding motif protein 15 binds to the RNA transport element RTE and provides a direct link to the NXF1 export pathway.	RBMY1D RBMY1B RBMY1E RBMY1A1	3.00e-11	7	35	4	17001072
Pubmed	The roles of RNA-binding proteins in spermatogenesis and male infertility.	RBMY1D RBMY1B RBMY1E RBMY1A1	3.00e-11	7	35	4	10377282
Pubmed	Y chromosome short arm-Sxr recombination in XSxr/Y males causes deletion of Rbm and XY female sex reversal.	RBMY1D RBMY1B RBMY1E RBMY1A1	6.00e-11	8	35	4	7479793
Pubmed	Mice with Y chromosome deletion and reduced Rbm genes on a heterozygous Dazl1 null background mimic a human azoospermic factor phenotype.	RBMY1D RBMY1B RBMY1E RBMY1A1	1.80e-10	10	35	4	10601091
Pubmed	Characterisation of the coding sequence and fine mapping of the human DFFRY gene and comparative expression analysis and mapping to the Sxrb interval of the mouse Y chromosome of the Dffry gene.	RBMY1D RBMY1B RBMY1E RBMY1A1	1.80e-10	10	35	4	9384609
Pubmed	The role of Dby mRNA in early development of male mouse zygotes.	RBMY1D RBMY1B RBMY1E RBMY1A1	4.23e-10	12	35	4	20543856
Pubmed	GASZ promotes germ cell derivation from embryonic stem cells.	RBMY1D RBMY1B RBMY1E RBMY1A1	6.10e-10	13	35	4	23816659
Pubmed	Absence of mDazl produces a final block on germ cell development at meiosis.	RBMY1D RBMY1B RBMY1E RBMY1A1	8.54e-10	14	35	4	14611631
Pubmed	Evolutionary strata on the mouse X chromosome correspond to strata on the human X chromosome.	RBMY1D RBMY1B RBMY1E RBMY1A1	1.16e-09	15	35	4	14762062
Pubmed	Loss of maternal Trim28 causes male-predominant early embryonic lethality.	RBMY1D RBMY1B RBMY1E RBMY1A1	2.03e-09	17	35	4	28115466
Pubmed	Sex differences in sex chromosome gene expression in mouse brain.	RBMY1D RBMY1B RBMY1E RBMY1A1	2.60e-09	18	35	4	12023983
Pubmed	MRNIP interacts with sex body chromatin to support meiotic progression, spermatogenesis, and male fertility in mice.	RBMY1D RBMY1B RBMY1E RBMY1A1	1.26e-08	26	35	4	35920200
Pubmed	Lineage-specific biology revealed by a finished genome assembly of the mouse.	RBMY1D RBMY1B RBMY1E RBMY1A1	2.83e-07	55	35	4	19468303
Pubmed	An abundance of X-linked genes expressed in spermatogonia.	RBMY1D RBMY1B RBMY1E RBMY1A1	3.76e-07	59	35	4	11279525
Pubmed	Haploinsufficiency of the germ cell-specific nuclear RNA binding protein hnRNP G-T prevents functional spermatogenesis in the mouse.	RBMXL2 RBMXL3	9.84e-07	2	35	2	18562473
Pubmed	Potential dual functional roles of the Y-linked RBMY in hepatocarcinogenesis.	RBMY1B RBMY1A1	9.84e-07	2	35	2	32473614
Pubmed	An ancient germ cell-specific RNA-binding protein protects the germline from cryptic splice site poisoning.	RBMXL2 RBMXL3	9.84e-07	2	35	2	30674417
Pubmed	The Clk2 and Clk3 dual-specificity protein kinases regulate the intranuclear distribution of SR proteins and influence pre-mRNA splicing.	CLK2 CLK3	9.84e-07	2	35	2	9637771
Pubmed	A genome-wide in situ hybridization map of RNA-binding proteins reveals anatomically restricted expression in the developing mouse brain.	RBMY1D RBMY1B RBMY1E RBMXL2 RBMXL3 RBMY1A1	1.20e-06	347	35	6	16033648
Pubmed	Haploinsufficiency of SAMD9L, an endosome fusion facilitator, causes myeloid malignancies in mice mimicking human diseases with monosomy 7.	RBMY1D RBMY1B RBMY1E RBMY1A1	2.56e-06	95	35	4	24029230
Pubmed	PJA1, encoding a RING-H2 finger ubiquitin ligase, is a novel human X chromosome gene abundantly expressed in brain.	PJA2 PJA1	2.95e-06	3	35	2	12036302
Pubmed	The germ cell nuclear proteins hnRNP G-T and RBMY activate a testis-specific exon.	RBMXL2 RBMY1A1	2.95e-06	3	35	2	19893608
Pubmed	The male-specific region of the human Y chromosome is a mosaic of discrete sequence classes.	RBMY1D RBMY1B RBMY1E RBMY1A1 RBMY1F	4.20e-06	241	35	5	12815422
Pubmed	Characterization and comparison of four serine- and arginine-rich (SR) protein kinases.	CLK2 CLK3	5.90e-06	4	35	2	9307018
Pubmed	Characterization by cDNA cloning of two new human protein kinases. Evidence by sequence comparison of a new family of mammalian protein kinases.	CLK2 CLK3	5.90e-06	4	35	2	7990150
Pubmed	Chromosomal mapping of three human LAMMER protein-kinase-encoding genes.	CLK2 CLK3	5.90e-06	4	35	2	9856501
Pubmed	Cdc2-like kinases and DNA topoisomerase I regulate alternative splicing of tissue factor in human endothelial cells.	CLK2 CLK3	9.82e-06	5	35	2	19168442
Pubmed	A RING finger protein Praja1 regulates Dlx5-dependent transcription through its ubiquitin ligase activity for the Dlx/Msx-interacting MAGE/Necdin family protein, Dlxin-1.	PJA2 PJA1	1.47e-05	6	35	2	11959851
Pubmed	Mammalian Bet3 functions as a cytosolic factor participating in transport from the ER to the Golgi apparatus.	RAB1A GOSR1	2.06e-05	7	35	2	15728249
Pubmed	Mouse Hox-3.4: homeobox sequence and embryonic expression patterns compared with other members of the Hox gene network.	HOXA6 HOXC5	2.74e-05	8	35	2	1976088
Pubmed	Praja1, a novel gene encoding a RING-H2 motif in mouse development.	PJA2 PJA1	3.53e-05	9	35	2	9393880
Pubmed	Region-specific gastrointestinal Hox code during murine embryonal gut development.	HOXA6 HOXC5	3.53e-05	9	35	2	11869294
Pubmed	Altered cellular proliferation and mesoderm patterning in Polycomb-M33-deficient mice.	HOXA6 HOXC5	3.53e-05	9	35	2	9043087
Pubmed	T-STAR/ETOILE: a novel relative of SAM68 that interacts with an RNA-binding protein implicated in spermatogenesis.	RBMY1A1 RBMY1C	4.40e-05	10	35	2	10332027
Pubmed	The protein interaction landscape of the human CMGC kinase group.	DMBT1 CLK2 CLK3 SRSF8 AXIN1 CLASRP	6.17e-05	695	35	6	23602568
Pubmed	BioID-based Identification of Skp Cullin F-box (SCF)β-TrCP1/2 E3 Ligase Substrates.	RBMXL2 EIF4B MAST3 AXIN1	7.76e-05	226	35	4	25900982
Pubmed	Hox-1.11 and Hox-4.9 homeobox genes.	HOXA6 HOXC5	8.89e-05	14	35	2	1348361
Pubmed	Organization and expression of mouse Hox3 cluster genes.	HOXA6 HOXC5	8.89e-05	14	35	2	8099712
Pubmed	SETD1A Methyltransferase Is Physically and Functionally Linked to the DNA Damage Repair Protein RAD18.	CWC22 CLK2 CLK3 SRSF8	1.16e-04	251	35	4	31076518
Pubmed	Alteration of Neuronal Excitability and Short-Term Synaptic Plasticity in the Prefrontal Cortex of a Mouse Model of Mental Illness.	PDE4D SCN8A	1.17e-04	16	35	2	28283561
Pubmed	Hox patterning of the vertebrate rib cage.	HOXA6 HOXC5	1.33e-04	17	35	2	17626057
Pubmed	Proximity interactions among centrosome components identify regulators of centriole duplication.	PJA2 NKTR PJA1	1.45e-04	101	35	3	24613305
Pubmed	Genetic and functional modularity of Hox activities in the specification of limb-innervating motor neurons.	HOXA6 HOXC5	1.49e-04	18	35	2	23359544
Pubmed	The mouse PcG gene eed is required for Hox gene repression and extraembryonic development.	HOXA6 HOXC5	1.85e-04	20	35	2	12370779
Pubmed	Crypto-rhombomeres of the mouse medulla oblongata, defined by molecular and morphological features.	HOXA6 HOXC5	2.04e-04	21	35	2	25381007
Pubmed	Organization of human class I homeobox genes.	HOXA6 HOXC5	2.24e-04	22	35	2	2576652
Pubmed	Targeted disruption of the mouse homologue of the Drosophila polyhomeotic gene leads to altered anteroposterior patterning and neural crest defects.	HOXA6 HOXC5	2.68e-04	24	35	2	9367423
Pubmed	Functional specialization of beta-arrestin interactions revealed by proteomic analysis.	NKTR PDE4D RAB1A EIF4B	2.84e-04	317	35	4	17620599
Pubmed	SRSF10 Plays a Role in Myoblast Differentiation and Glucose Production via Regulation of Alternative Splicing.	PJA2 AXIN1	3.15e-04	26	35	2	26586428
Pubmed	Fine mapping of human HOX gene clusters.	HOXA6 HOXC5	3.15e-04	26	35	2	8646877
Pubmed	Sf3b4 regulates chromatin remodeler splicing and Hox expression.	HOXA6 HOXC5	4.79e-04	32	35	2	37167859
Pubmed	A deep proteomics perspective on CRM1-mediated nuclear export and nucleocytoplasmic partitioning.	DNAAF3 PJA2 PJA1 EIF4B AXIN1 CLASRP	5.39e-04	1038	35	6	26673895
Pubmed	Global control of motor neuron topography mediated by the repressive actions of a single hox gene.	HOXA6 HOXC5	6.07e-04	36	35	2	20826310
Pubmed	ATG5 is required for B cell polarization and presentation of particulate antigens.	NKTR CWC22 CLK2 EIF4B CLASRP	6.45e-04	701	35	5	30196744
Pubmed	The cellular EJC interactome reveals higher-order mRNP structure and an EJC-SR protein nexus.	CWC22 SRSF8 EIF4B	6.58e-04	169	35	3	23084401
Pubmed	Complete mutation analysis panel of the 39 human HOX genes.	HOXA6 HOXC5	6.76e-04	38	35	2	11857506
Pubmed	Atlas of Hox gene expression in the developing kidney.	HOXA6 HOXC5	6.76e-04	38	35	2	15042701
Pubmed	Lysine demethylase 7a regulates murine anterior-posterior development by modulating the transcription of Hox gene cluster.	HOXA6 HOXC5	7.12e-04	39	35	2	33257809
Pubmed	Matrix-screening reveals a vast potential for direct protein-protein interactions among RNA binding proteins.	CWC22 CLK2 CLK3 SRSF8 EIF4B	7.41e-04	723	35	5	34133714
Pubmed	Quantification of Hox and surfactant protein-B transcription during murine lung development.	HOXA6 HOXC5	7.49e-04	40	35	2	19204410
Pubmed	Lin28a/let-7 pathway modulates the Hox code via Polycomb regulation during axial patterning in vertebrates.	HOXA6 HOXC5	7.87e-04	41	35	2	32479258
Pubmed	Reduction of Hox gene expression by histone H1 depletion.	HOXA6 HOXC5	8.66e-04	43	35	2	22701719
Pubmed	TRIM6 promotes colorectal cancer cells proliferation and response to thiostrepton by TIS21/FoxM1.	RAB1A EIF4B	8.66e-04	43	35	2	31992359
Pubmed	Nomenclature for human homeobox genes.	HOXA6 HOXC5	9.06e-04	44	35	2	1973146
Interaction	RBMY1F interactions	RBMY1E CLK3 RBMY1A1 RBMY1F	4.32e-07	36	35	4	int:RBMY1F
Interaction	CLK3 interactions	CLK2 CLK3 SRSF8 RBMY1A1 CLASRP RBMY1F	1.97e-06	220	35	6	int:CLK3
Interaction	NKAPD1 interactions	NKTR CWC22 CLK2 CLK3 SRSF8	8.18e-06	161	35	5	int:NKAPD1
Interaction	RBMX interactions	RBMY1E USP45 RBMXL2 CLK3 RBMY1A1 EIF4B RBMY1F	1.21e-05	461	35	7	int:RBMX
Interaction	RBMY1J interactions	RBMY1E RBMY1A1 RBMY1F	1.70e-05	29	35	3	int:RBMY1J
Interaction	RBMY1E interactions	RBMY1E RBMY1F	1.75e-05	4	35	2	int:RBMY1E
Interaction	CLK2 interactions	NKTR CLK2 CLK3 SRSF8 CLASRP	2.07e-05	195	35	5	int:CLK2
Interaction	RBMY1A1 interactions	CLK3 RBMY1A1 RBMY1F	2.30e-05	32	35	3	int:RBMY1A1
Interaction	CLK1 interactions	DMBT1 CLK2 CLK3 SRSF8 CLASRP	3.60e-05	219	35	5	int:CLK1
Interaction	TRA2B interactions	RBMXL2 CLK2 CLK3 SRSF8 RBMY1A1 RBMY1F	4.75e-05	385	35	6	int:TRA2B
Interaction	LUC7L interactions	NKTR CLK2 CLK3 SRSF8 CLASRP	5.79e-05	242	35	5	int:LUC7L
Interaction	SNIP1 interactions	NKTR CWC22 CLK2 CLK3 SRSF8 CLASRP	7.39e-05	417	35	6	int:SNIP1
Interaction	BIVM-ERCC5 interactions	CLK2 CLK3	1.31e-04	10	35	2	int:BIVM-ERCC5
Interaction	SNRPA interactions	NKTR CWC22 CLK2 SRSF8 RBMY1A1 RBMY1F	1.63e-04	482	35	6	int:SNRPA
Interaction	ZNF317 interactions	CLK2 RBMY1A1 RBMY1F	1.86e-04	64	35	3	int:ZNF317
Interaction	CLASRP interactions	CLK2 CLK3 CLASRP	3.60e-04	80	35	3	int:CLASRP
Cytoband	Yq11.223	RBMY1D RBMY1B RBMY1E RBMY1A1 RBMY1F	9.46e-09	93	35	5	Yq11.223
Cytoband	Ensembl 112 genes in cytogenetic band chrYq11	RBMY1D RBMY1B RBMY1E RBMY1A1 RBMY1F	3.80e-06	311	35	5	chrYq11
Cytoband	Ensembl 112 genes in cytogenetic band chr12q13	HOXC5 EIF4B SCN8A	4.08e-03	423	35	3	chr12q13
GeneFamily	RNA binding motif containing	RBMY1D RBMY1B RBMY1E RBMXL2 RBMXL3 RBMY1A1 RBMY1C EIF4B RBMY1F	3.01e-11	213	29	9	725
GeneFamily	CDC like kinases	CLK2 CLK3	1.49e-05	4	29	2	480
GeneFamily	HOXL subclass homeoboxes	HOXA6 HOXC5	3.13e-03	52	29	2	518
Coexpression	CHEN_ETV5_TARGETS_TESTIS	RBMY1D RBMY1B RBMY1E RBMY1A1	9.40e-08	33	34	4	MM701
Coexpression	ZHENG_IL22_SIGNALING_DN	RBMY1D RBMY1B RBMY1E RBMY1A1	3.38e-07	45	34	4	MM763
Coexpression	IVANOVA_HEMATOPOIESIS_STEM_CELL_AND_PROGENITOR	RBMY1D RBMY1B RBMY1E HOXA6 RBMY1A1 CLASRP SCN8A	1.00e-05	600	34	7	MM1025
Coexpression	GSE40493_BCL6_KO_VS_WT_TREG_UP	PJA2 USP45 PJA1 EIF4B	7.96e-05	177	34	4	M9401
Coexpression	MIKKELSEN_MEF_HCP_WITH_H3K27ME3	ATP8B3 RBMXL2 RBMXL3 ADCYAP1 CYP27B1 SCN8A	1.10e-04	601	34	6	MM866
ToppCell	Globus_pallidus-Neuronal-Excitatory-eN3(Slc17a7_Gad1Gad2)-Neurod2-Excitatory_Neuron.Slc17a7.Neurod2-Rorb_(Nucleus_of_the_lateral_olfactory_tract_(LOT))-\|Globus_pallidus / BrainAtlas - Mouse McCarroll V32	IGFN1 RFX8 CYP27B1	1.59e-05	68	32	3	6945089858778301a05ecc5895310d768768758c
ToppCell	Globus_pallidus-Neuronal-Excitatory-eN3(Slc17a7_Gad1Gad2)-Neurod2-Excitatory_Neuron.Slc17a7.Neurod2-Rorb_(Nucleus_of_the_lateral_olfactory_tract_(LOT))\|Globus_pallidus / BrainAtlas - Mouse McCarroll V32	IGFN1 RFX8 CYP27B1	1.59e-05	68	32	3	ac9d0f473c878b96a422bbdd7088eb8125574dde
Drug	hydantoin-5-propionic acid	RBMY1D RBMY1B RBMY1E RBMY1A1	2.44e-08	21	34	4	CID000000782
Drug	AZFd	RBMY1D RBMY1B RBMY1E RBMY1A1	3.60e-08	23	34	4	CID000196489
Drug	Vistar	RBMY1D RBMY1B RBMY1E RBMY1A1	2.36e-07	36	34	4	CID000040896
Drug	2-chlorodideoxyadenosine	RBMY1D RBMY1B RBMY1E RBMY1A1	4.91e-07	43	34	4	CID000072194
Drug	PKI166	RBMY1D RBMY1B RBMY1E RBMY1A1	7.70e-07	48	34	4	CID006918403
Drug	HgCl	RBMY1D RBMY1B RBMY1E RBMY1A1	8.37e-07	49	34	4	CID000024182
Drug	azafagomine	RBMY1D RBMY1B RBMY1E RBMY1A1	1.55e-06	57	34	4	CID011957435
Drug	thioglycolate	RBMY1D RBMY1B RBMY1E RBMY1A1	2.97e-06	67	34	4	CID000001133
Drug	SU6668	RBMY1D RBMY1B RBMY1E RBMY1A1	3.54e-06	70	34	4	CID000206042
Drug	p11-13	RBMY1D RBMY1B RBMY1E RBMY1A1	4.67e-06	75	34	4	CID000015759
Drug	bipy	RBMY1D RBMY1B RBMY1E RBMY1A1	1.30e-05	97	34	4	CID000001474
Drug	2-oyl	RBMY1D RBMY1B RBMY1E RBMY1A1	1.78e-05	105	34	4	CID000657137
Drug	carbonyl sulfide	RBMY1D RBMY1B RBMY1E RBMY1A1	2.64e-05	116	34	4	CID000010039
Drug	oligoadenylate	RBMY1D RBMY1B RBMY1E RBMY1A1	8.59e-05	157	34	4	CID000107918
Drug	((5Z)5-(1,3-benzodioxol-5-yl)methylene-2-phenylamino-3,5-dihydro-4H-imidazol-4-one)	CLK2 CLK3	1.42e-04	12	34	2	ctd:C578491
Disease	thyroid stimulating hormone measurement	ATP8B3 PDE4D PJA1 EIF4B	2.34e-04	323	28	4	EFO_0004748
Disease	arachidonic acid measurement	DNAAF3 RBMXL2	2.57e-04	25	28	2	EFO_0006808
Disease	waist circumference	DNAAF3 CWC22 ADCYAP1 AXIN1	6.84e-04	429	28	4	EFO_0004342
Disease	Cleft palate, cleft lip	PDE4D CLK3 EIF4B	2.30e-03	279	28	3	EFO_0003959, HP_0000175
Disease	breast milk measurement	CWC22 GOSR1	4.55e-03	106	28	2	EFO_0009092
Disease	response to vaccine, cytokine measurement	DNAAF3 PDE4D	6.86e-03	131	28	2	EFO_0004645, EFO_0004873

Protein segments in the cluster

Peptide	Gene	Start	Entry
RYHSSERGSRGSYRE	CLK2	6	P49760
ERGSRGSYREHYRSR	CLK2	11	P49760
SFGEDYYGPSRSRHR	CLK3	226	P49761
RARRSSYAFSHREGY	ATP8B3	1246	O60423
GHSRRDESYSRGYRN	RBMY1A1	281	P0DJD3
RRHESYSRGYRNHPS	RBMY1A1	321	P0DJD3
YSRGYRNHPSSRETR	RBMY1A1	326	P0DJD3
STCHAYSNTRDRYGR	RBMY1A1	416	P0DJD3
GHSRRDESYSRGYRN	RBMY1B	281	A6NDE4
RRHESYSRGYRNHPS	RBMY1B	321	A6NDE4
YSRGYRNHPSSRETR	RBMY1B	326	A6NDE4
STCHAYSNTRDRYGR	RBMY1B	416	A6NDE4
GHSRRDESYSRGYRN	RBMY1C	281	P0DJD4
RRHESYSRGYRNHPS	RBMY1C	321	P0DJD4
YSRGYRNHPSSRETR	RBMY1C	326	P0DJD4
STCHAYSNTRDRYGR	RBMY1C	416	P0DJD4
GHSRRDESYSRGYRN	RBMY1D	281	P0C7P1
RRHESYSRGYRNHPS	RBMY1D	321	P0C7P1
YSRGYRNHPSSRETR	RBMY1D	326	P0C7P1
STCHAYSNTRDRYGR	RBMY1D	416	P0C7P1
GHSRRDESYSRGYRN	RBMY1E	281	A6NEQ0
RRHESYSRGYRNHPS	RBMY1E	321	A6NEQ0
YSRGYRNHPSSRETR	RBMY1E	326	A6NEQ0
STCHAYSNTRDRYGR	RBMY1E	416	A6NEQ0
GHSRRDESYSRGYRN	RBMY1F	281	Q15415
DESYSRGYRNHRSSR	RBMY1F	286	Q15415
RRHESYSRGYRNHPS	RBMY1F	321	Q15415
YSRGYRNHPSSRETR	RBMY1F	326	Q15415
STCHAYSNTRDRYGR	RBMY1F	416	Q15415
ERFRTITSSYYRGAH	RAB1A	71	P62820
SSGSLVATHDYYRRR	PPDPF	6	Q9H3Y8
VATHDYYRRRLGSTS	PPDPF	11	Q9H3Y8
LGASLGYREYHSARR	CYP27B1	21	O15528
GYREYHSARRSLADI	CYP27B1	26	O15528
HETDGKRSRTSYTRY	HOXC5	151	Q00444
SYSHSSTRDGRRDRY	GOSR1	36	O95249
YGSHGRRGRQTYTRY	HOXA6	151	P31267
FDYSRSDYEHSRRGR	CWC22	46	Q9HCG8
SDYEHSRRGRSYDSS	CWC22	51	Q9HCG8
TGRVRHRGYSDTERY	PDE4D	101	Q08499
RHSDGIFTDSYSRYR	ADCYAP1	131	P18509
HYLGSRYDARRGVSD	DNAAF3	196	Q8N9W5
SSSRRYSEGREFRYG	AXIN1	281	O15169
SYFDTRSERYRHLGS	MAST3	666	O60307
YGERRDATRSSTSRY	IGFN1	426	Q86VF2
SDHSITRRGFRAEYY	DMBT1	2101	Q9UGM3
RQGSSYHRTGSGYSR	FAM120B	871	Q96EK7
YDRGYDSRIGSGRRA	EIF4B	266	P23588
GRSYNRRSRSCRSYG	NKTR	1426	P30414
SRSRYRESRYGGSHY	SRSF8	176	Q9BRL6
YSSSYGRSDRYSRGR	RBMXL2	326	O75526
SRSSSRSRRGGGYYR	CLASRP	396	Q8N2M8
GGYYRSGRHARSRSR	CLASRP	406	Q8N2M8
YRSLRETDHDRYSGN	USP45	401	Q70EL2
GRYEEYRGRSHEARS	RBMXL3	421	Q8N7X1
YRGRSHEARSGGRST	RBMXL3	426	Q8N7X1
GRDSSSNSYDRSHRY	RBMXL3	841	Q8N7X1
SSNSYGRSDRYSRGR	RBMXL3	1001	Q8N7X1
GTRRLGTRGSARYHY	RFX8	76	Q6ZV50
RARERRSSYSGYSGY	SCN8A	606	Q9UQD0
GYQSNTGRRYGRRHA	PJA1	16	Q8NG27
ITGRRYGRRHAYVSF	PJA2	31	O43164