Cluster composition

Functions

Category	Name	IntersectionWithQuery	PValue	GenesInTerm	GenesInQuery	GenesInTermInQuery	ID
GeneOntologyBiologicalProcess	homocysteine metabolic process	BLMH COMT MTRR	1.04e-05	15	60	3	GO:0050667
GeneOntologyBiologicalProcess	myoblast differentiation	ILK MAML1 SMARCA2 SMARCA4 PLG	4.73e-05	136	60	5	GO:0045445
GeneOntologyBiologicalProcess	homocysteine catabolic process	BLMH MTRR	4.97e-05	4	60	2	GO:0043418
GeneOntologyBiologicalProcess	regulation of stem cell population maintenance	KDM3A SMARCA2 SMARCA4 CNOT1	7.86e-05	78	60	4	GO:2000036
GeneOntologyBiologicalProcess	aortic smooth muscle cell differentiation	SMARCA2 SMARCA4	1.24e-04	6	60	2	GO:0035887
Domain	SnAC	SMARCA2 SMARCA4	1.01e-05	2	60	2	SM01314
Domain	Gln-Leu-Gln_QLQ	SMARCA2 SMARCA4	1.01e-05	2	60	2	IPR014978
Domain	SnAC	SMARCA2 SMARCA4	1.01e-05	2	60	2	IPR029295
Domain	SnAC	SMARCA2 SMARCA4	1.01e-05	2	60	2	PF14619
Domain	QLQ	SMARCA2 SMARCA4	1.01e-05	2	60	2	SM00951
Domain	QLQ	SMARCA2 SMARCA4	1.01e-05	2	60	2	PS51666
Domain	QLQ	SMARCA2 SMARCA4	1.01e-05	2	60	2	PF08880
Domain	Spectrin	SYNE3 CCDC141 UTRN	5.33e-05	23	60	3	PF00435
Domain	HSA	SMARCA2 SMARCA4	6.06e-05	4	60	2	SM00573
Domain	HSA	SMARCA2 SMARCA4	6.06e-05	4	60	2	PS51204
Domain	HSA_dom	SMARCA2 SMARCA4	6.06e-05	4	60	2	IPR014012
Domain	HSA	SMARCA2 SMARCA4	6.06e-05	4	60	2	PF07529
Domain	Spectrin_repeat	SYNE3 CCDC141 UTRN	1.09e-04	29	60	3	IPR002017
Domain	BRK	SMARCA2 SMARCA4	1.51e-04	6	60	2	SM00592
Domain	BRK_domain	SMARCA2 SMARCA4	1.51e-04	6	60	2	IPR006576
Domain	BRK	SMARCA2 SMARCA4	1.51e-04	6	60	2	PF07533
Domain	Cadherin_CS	CDH26 PCDHGB5 CDH2 CDHR4	4.16e-04	109	60	4	IPR020894
Domain	CADHERIN_1	CDH26 PCDHGB5 CDH2 CDHR4	4.77e-04	113	60	4	PS00232
Domain	Cadherin	CDH26 PCDHGB5 CDH2 CDHR4	4.77e-04	113	60	4	PF00028
Domain	CADHERIN_2	CDH26 PCDHGB5 CDH2 CDHR4	4.93e-04	114	60	4	PS50268
Domain	-	CDH26 PCDHGB5 CDH2 CDHR4	4.93e-04	114	60	4	2.60.40.60
Domain	CA	CDH26 PCDHGB5 CDH2 CDHR4	5.10e-04	115	60	4	SM00112
Domain	Cadherin-like	CDH26 PCDHGB5 CDH2 CDHR4	5.27e-04	116	60	4	IPR015919
Domain	Cadherin	CDH26 PCDHGB5 CDH2 CDHR4	5.62e-04	118	60	4	IPR002126
Domain	BAR	BIN3 ACAP2	1.68e-03	19	60	2	PS51021
Domain	Bromodomain_CS	SMARCA2 SMARCA4	3.14e-03	26	60	2	IPR018359
Domain	-	BIN3 ACAP2	4.17e-03	30	60	2	1.20.1270.60
Domain	AH/BAR-dom	BIN3 ACAP2	4.17e-03	30	60	2	IPR027267
Domain	SNF2_N	SMARCA2 SMARCA4	4.73e-03	32	60	2	IPR000330
Domain	Spectrin/alpha-actinin	SYNE3 UTRN	4.73e-03	32	60	2	IPR018159
Domain	SNF2_N	SMARCA2 SMARCA4	4.73e-03	32	60	2	PF00176
Domain	SPEC	SYNE3 UTRN	4.73e-03	32	60	2	SM00150
Domain	BROMODOMAIN_1	SMARCA2 SMARCA4	6.29e-03	37	60	2	PS00633
Pathway	REACTOME_EGR2_AND_SOX10_MEDIATED_INITIATION_OF_SCHWANN_CELL_MYELINATION	NAB1 SMARCA4 POU3F2 UTRN	2.22e-06	29	46	4	M29808
Pubmed	Defining the membrane proteome of NK cells.	KDM3A FARSA FASN SYNE3 ILK COMT BAG5 PEX16 SMARCA4 ACAP2 APOBR CNOT1 ILVBL	9.50e-08	1168	61	13	19946888
Pubmed	Defining the human deubiquitinating enzyme interaction landscape.	BLMH PRKD3 FLG KDM3A FGFR1OP2 FARSA SSU72 AMOT BAG5 SMARCA2 UTRN CNOT1	1.50e-07	1005	61	12	19615732
Pubmed	TRIM21 ameliorates hepatic glucose and lipid metabolic disorders in type 2 diabetes mellitus by ubiquitination of PEPCK1 and FASN.	BLMH FLG FARSA FASN SYNE3 ILK ILVBL NPM3	3.49e-07	382	61	8	37249651
Pubmed	Protein interaction network of the mammalian Hippo pathway reveals mechanisms of kinase-phosphatase interactions.	FGFR1OP2 RAPGEF6 TRIM32 AMOT BAG5 UTRN CNOT1 ILVBL	1.12e-06	446	61	8	24255178
Pubmed	The hbrm and BRG-1 proteins, components of the human SNF/SWI complex, are phosphorylated and excluded from the condensed chromosomes during mitosis.	SMARCA2 SMARCA4	3.03e-06	2	61	2	8670841
Pubmed	Lung cancer with loss of BRG1/BRM, shows epithelial mesenchymal transition phenotype and distinct histologic and genetic features.	SMARCA2 SMARCA4	3.03e-06	2	61	2	23163725
Pubmed	Combined gene dosage requirement for SWI/SNF catalytic subunits during early mammalian development.	SMARCA2 SMARCA4	3.03e-06	2	61	2	23076393
Pubmed	Differential preimplantation regulation of two mouse homologues of the yeast SWI2 protein.	SMARCA2 SMARCA4	3.03e-06	2	61	2	9603422
Pubmed	The SWI/SNF chromatin remodeling protein Brg1 is required for vertebrate neurogenesis and mediates transactivation of Ngn and NeuroD.	SMARCA2 SMARCA4	3.03e-06	2	61	2	15576411
Pubmed	SWI/SNF gene variants and glioma risk and outcome.	SMARCA2 SMARCA4	3.03e-06	2	61	2	23276717
Pubmed	BRG1 regulates NOX gene transcription in endothelial cells and contributes to cardiac ischemia-reperfusion injury.	KDM3A SMARCA4	3.03e-06	2	61	2	30293567
Pubmed	Differential Expression of SWI/SNF Chromatin Remodeler Subunits Brahma and Brahma-Related Gene During Drug-Induced Liver Injury and Regeneration in Mouse Model.	SMARCA2 SMARCA4	3.03e-06	2	61	2	27097303
Pubmed	Chromatin remodeling factors and BRM/BRG1 expression as prognostic indicators in non-small cell lung cancer.	SMARCA2 SMARCA4	3.03e-06	2	61	2	15240517
Pubmed	Concomitant loss of SMARCA2 and SMARCA4 expression in small cell carcinoma of the ovary, hypercalcemic type.	SMARCA2 SMARCA4	3.03e-06	2	61	2	26564006
Pubmed	SMARCA4/SMARCA2-deficient Carcinoma of the Esophagus and Gastroesophageal Junction.	SMARCA2 SMARCA4	3.03e-06	2	61	2	33027072
Pubmed	SMARCA4 and SMARCA2 deficiency in non-small cell lung cancer: immunohistochemical survey of 316 consecutive specimens.	SMARCA2 SMARCA4	3.03e-06	2	61	2	28038711
Pubmed	A synthetic lethality-based strategy to treat cancers harboring a genetic deficiency in the chromatin remodeling factor BRG1.	SMARCA2 SMARCA4	3.03e-06	2	61	2	23872584
Pubmed	Proinflammatory stimuli engage Brahma related gene 1 and Brahma in endothelial injury.	SMARCA2 SMARCA4	3.03e-06	2	61	2	23963727
Pubmed	SW13 cells can transition between two distinct subtypes by switching expression of BRG1 and Brm genes at the post-transcriptional level.	SMARCA2 SMARCA4	3.03e-06	2	61	2	12493776
Pubmed	Heterozygous Mutations in SMARCA2 Reprogram the Enhancer Landscape by Global Retargeting of SMARCA4.	SMARCA2 SMARCA4	3.03e-06	2	61	2	31375262
Pubmed	Alterations of the SWI/SNF chromatin remodelling subunit-BRG1 and BRM in hepatocellular carcinoma.	SMARCA2 SMARCA4	3.03e-06	2	61	2	23088494
Pubmed	Aberrant expression of SWI/SNF catalytic subunits BRG1/BRM is associated with tumor development and increased invasiveness in prostate cancers.	SMARCA2 SMARCA4	3.03e-06	2	61	2	17075831
Pubmed	SWI/SNF chromatin remodeling enzyme ATPases promote cell proliferation in normal mammary epithelial cells.	SMARCA2 SMARCA4	3.03e-06	2	61	2	20333683
Pubmed	SWI/SNF Complex-deficient Undifferentiated Carcinoma of the Gastrointestinal Tract: Clinicopathologic Study of 30 Cases With an Emphasis on Variable Morphology, Immune Features, and the Prognostic Significance of Different SMARCA4 and SMARCA2 Subunit Deficiencies.	SMARCA2 SMARCA4	3.03e-06	2	61	2	34812766
Pubmed	Loss of SWI/SNF Chromatin Remodeling Alters NRF2 Signaling in Non-Small Cell Lung Carcinoma.	SMARCA2 SMARCA4	3.03e-06	2	61	2	32855269
Pubmed	Targeting of BRM Sensitizes BRG1-Mutant Lung Cancer Cell Lines to Radiotherapy.	SMARCA2 SMARCA4	3.03e-06	2	61	2	30478150
Pubmed	Downregulation of SWI/SNF chromatin remodeling factor subunits modulates cisplatin cytotoxicity.	SMARCA2 SMARCA4	3.03e-06	2	61	2	22721696
Pubmed	Chromatin remodeling complexes interact dynamically with a glucocorticoid receptor-regulated promoter.	SMARCA2 SMARCA4	3.03e-06	2	61	2	18508913
Pubmed	Compensation of BRG-1 function by Brm: insight into the role of the core SWI-SNF subunits in retinoblastoma tumor suppressor signaling.	SMARCA2 SMARCA4	3.03e-06	2	61	2	11719516
Pubmed	The SWI/SNF ATPases Are Required for Triple Negative Breast Cancer Cell Proliferation.	SMARCA2 SMARCA4	3.03e-06	2	61	2	25808524
Pubmed	Antagonistic roles for BRM and BRG1 SWI/SNF complexes in differentiation.	SMARCA2 SMARCA4	3.03e-06	2	61	2	19144648
Pubmed	DNA binding drives the association of BRG1/hBRM bromodomains with nucleosomes.	SMARCA2 SMARCA4	3.03e-06	2	61	2	28706277
Pubmed	[Expression of BRG1 and BRM proteins in prostatic cancer].	SMARCA2 SMARCA4	3.03e-06	2	61	2	21092585
Pubmed	Angiomotin: an angiostatin binding protein that regulates endothelial cell migration and tube formation.	AMOT PLG	3.03e-06	2	61	2	11257124
Pubmed	High expression of SMARCA4 or SMARCA2 is frequently associated with an opposite prognosis in cancer.	SMARCA2 SMARCA4	3.03e-06	2	61	2	29391527
Pubmed	Expression of SMARCA2 and SMARCA4 in gastric adenocarcinoma and construction of a nomogram prognostic model.	SMARCA2 SMARCA4	3.03e-06	2	61	2	37634210
Pubmed	SWI/SNF Complex-deficient Undifferentiated/Rhabdoid Carcinomas of the Gastrointestinal Tract: A Series of 13 Cases Highlighting Mutually Exclusive Loss of SMARCA4 and SMARCA2 and Frequent Co-inactivation of SMARCB1 and SMARCA2.	SMARCA2 SMARCA4	3.03e-06	2	61	2	26551623
Pubmed	SWI/SNF deficiency results in aberrant chromatin organization, mitotic failure, and diminished proliferative capacity.	SMARCA2 SMARCA4	3.03e-06	2	61	2	19458193
Pubmed	Two human homologues of Saccharomyces cerevisiae SWI2/SNF2 and Drosophila brahma are transcriptional coactivators cooperating with the estrogen receptor and the retinoic acid receptor.	SMARCA2 SMARCA4	3.03e-06	2	61	2	8208605
Pubmed	The Bromodomains of the mammalian SWI/SNF (mSWI/SNF) ATPases Brahma (BRM) and Brahma Related Gene 1 (BRG1) promote chromatin interaction and are critical for skeletal muscle differentiation.	SMARCA2 SMARCA4	3.03e-06	2	61	2	34289068
Pubmed	SMARCA4/2 loss inhibits chemotherapy-induced apoptosis by restricting IP3R3-mediated Ca2+ flux to mitochondria.	SMARCA2 SMARCA4	3.03e-06	2	61	2	34518526
Pubmed	SMARCA family of genes.	SMARCA2 SMARCA4	3.03e-06	2	61	2	32312722
Pubmed	Dual loss of the SWI/SNF complex ATPases SMARCA4/BRG1 and SMARCA2/BRM is highly sensitive and specific for small cell carcinoma of the ovary, hypercalcaemic type.	SMARCA2 SMARCA4	3.03e-06	2	61	2	26356327
Pubmed	Loss of BRG1/BRM in human lung cancer cell lines and primary lung cancers: correlation with poor prognosis.	SMARCA2 SMARCA4	3.03e-06	2	61	2	12566296
Pubmed	A Brg1 null mutation in the mouse reveals functional differences among mammalian SWI/SNF complexes.	SMARCA2 SMARCA4	3.03e-06	2	61	2	11163203
Pubmed	Transcriptional specificity of human SWI/SNF BRG1 and BRM chromatin remodeling complexes.	SMARCA2 SMARCA4	3.03e-06	2	61	2	12620226
Pubmed	SMARCA2-deficiency confers sensitivity to targeted inhibition of SMARCA4 in esophageal squamous cell carcinoma cell lines.	SMARCA2 SMARCA4	3.03e-06	2	61	2	31406271
Pubmed	BRG1 and BRM SWI/SNF ATPases redundantly maintain cardiomyocyte homeostasis by regulating cardiomyocyte mitophagy and mitochondrial dynamics in vivo.	SMARCA2 SMARCA4	3.03e-06	2	61	2	27039070
Pubmed	Partial Inactivation of the Chromatin Remodelers SMARCA2 and SMARCA4 in Virus-Infected Cells by Caspase-Mediated Cleavage.	SMARCA2 SMARCA4	3.03e-06	2	61	2	29848589
Pubmed	Co-regulation of transcription by BRG1 and BRM, two mutually exclusive SWI/SNF ATPase subunits.	SMARCA2 SMARCA4	3.03e-06	2	61	2	29273066
Pubmed	A family with hypothyroidism caused by fatty acid synthase and apolipoprotein B receptor mutations.	FASN APOBR	3.03e-06	2	61	2	30272292
Pubmed	PRISMA and BioID disclose a motifs-based interactome of the intrinsically disordered transcription factor C/EBPα.	BLMH KDM3A FASN ILK NAB1 MAML1 SMARCA2 SMARCA4 ETV6 ZKSCAN4 CNOT1	3.04e-06	1103	61	11	34189442
Pubmed	Loss of BAF Complex in Developing Cortex Perturbs Radial Neuronal Migration in a WNT Signaling-Dependent Manner.	SMARCA2 SMARCA4 POU3F2	5.73e-06	20	61	3	34220450
Pubmed	Human transcription factor protein interaction networks.	FLG RNF214 TBL1Y BAG5 MAML1 SMARCA2 SMARCA4 ETV6 ZKSCAN4 CNOT1 ILVBL NPM3	5.95e-06	1429	61	12	35140242
Pubmed	Selective Killing of SMARCA2- and SMARCA4-deficient Small Cell Carcinoma of the Ovary, Hypercalcemic Type Cells by Inhibition of EZH2: In Vitro and In Vivo Preclinical Models.	SMARCA2 SMARCA4	9.07e-06	3	61	2	28292935
Pubmed	Clinicopathological and prognostic significance of SWI/SNF complex subunits in undifferentiated gastric carcinoma.	SMARCA2 SMARCA4	9.07e-06	3	61	2	36464671
Pubmed	Angiomotin regulates endothelial cell-cell junctions and cell motility.	AMOT PLG	9.07e-06	3	61	2	16043488
Pubmed	DNA damage sensitivity of SWI/SNF-deficient cells depends on TFIIH subunit p62/GTF2H1.	SMARCA2 SMARCA4	9.07e-06	3	61	2	30287812
Pubmed	Integrin-linked kinase regulates cadherin switch in bladder cancer.	ILK CDH2	9.07e-06	3	61	2	27683053
Pubmed	The activity of p53 is differentially regulated by Brm- and Brg1-containing SWI/SNF chromatin remodeling complexes.	SMARCA2 SMARCA4	9.07e-06	3	61	2	17938176
Pubmed	Functional redundancy of SWI/SNF catalytic subunits in maintaining vascular endothelial cells in the adult heart.	SMARCA2 SMARCA4	9.07e-06	3	61	2	22740088
Pubmed	BRCA1 interacts with dominant negative SWI/SNF enzymes without affecting homologous recombination or radiation-induced gene activation of p21 or Mdm2.	SMARCA2 SMARCA4	9.07e-06	3	61	2	15034933
Pubmed	TopBP1 recruits Brg1/Brm to repress E2F1-induced apoptosis, a novel pRb-independent and E2F1-specific control for cell survival.	SMARCA2 SMARCA4	9.07e-06	3	61	2	15075294
Pubmed	A putative nuclear receptor coactivator (TMF/ARA160) associates with hbrm/hSNF2 alpha and BRG-1/hSNF2 beta and localizes in the Golgi apparatus.	SMARCA2 SMARCA4	9.07e-06	3	61	2	12044884
Pubmed	SWI/SNF complexes containing Brahma or Brahma-related gene 1 play distinct roles in smooth muscle development.	SMARCA2 SMARCA4	9.07e-06	3	61	2	21518954
Pubmed	Heterogeneous SWI/SNF chromatin remodeling complexes promote expression of microphthalmia-associated transcription factor target genes in melanoma.	SMARCA2 SMARCA4	9.07e-06	3	61	2	19784067
Pubmed	Characterization of mammary tumors from Brg1 heterozygous mice.	SMARCA2 SMARCA4	9.07e-06	3	61	2	17637742
Pubmed	BRG1 co-localizes with DNA replication factors and is required for efficient replication fork progression.	SMARCA2 SMARCA4	9.07e-06	3	61	2	20571081
Pubmed	Conserved SNH domain of the proto-oncoprotein SYT interacts with components of the human chromatin remodelling complexes, while the QPGY repeat domain forms homo-oligomers.	SMARCA2 SMARCA4	9.07e-06	3	61	2	14603256
Pubmed	SWI/SNF chromatin remodeling subunit Smarca4/BRG1 is essential for female fertility†.	SMARCA2 SMARCA4	9.07e-06	3	61	2	36440965
Pubmed	Ligand-dependent interaction between the estrogen receptor and the human homologues of SWI2/SNF2.	SMARCA2 SMARCA4	9.07e-06	3	61	2	9099865
Pubmed	Chromatin regulation by BAF170 controls cerebral cortical size and thickness.	SMARCA2 SMARCA4 POU3F2	1.63e-05	28	61	3	23643363
Pubmed	Dual role of NRSF/REST in activation and repression of the glucocorticoid response.	SMARCA2 SMARCA4	1.81e-05	4	61	2	17984088
Pubmed	Loss of the SWI/SNF-ATPase subunit members SMARCF1 (ARID1A), SMARCA2 (BRM), SMARCA4 (BRG1) and SMARCB1 (INI1) in oesophageal adenocarcinoma.	SMARCA2 SMARCA4	1.81e-05	4	61	2	31906887
Pubmed	Functional specificities of Brm and Brg-1 Swi/Snf ATPases in the feedback regulation of hepatic bile acid biosynthesis.	SMARCA2 SMARCA4	1.81e-05	4	61	2	19805516
Pubmed	SWI/SNF chromatin-remodeling enzymes Brahma-related gene 1 (BRG1) and Brahma (BRM) are dispensable in multiple models of postnatal angiogenesis but are required for vascular integrity in infant mice.	SMARCA2 SMARCA4	1.81e-05	4	61	2	25904594
Pubmed	BRM (SNF2alpha) expression is concomitant to the onset of vasculogenesis in early mouse postimplantation development.	SMARCA2 SMARCA4	1.81e-05	4	61	2	11231080
Pubmed	BRG1/BRM and prohibitin are required for growth suppression by estrogen antagonists.	SMARCA2 SMARCA4	1.81e-05	4	61	2	15141164
Pubmed	BRG1 and BRM chromatin-remodeling complexes regulate the hypoxia response by acting as coactivators for a subset of hypoxia-inducible transcription factor target genes.	SMARCA2 SMARCA4	1.81e-05	4	61	2	23897427
Pubmed	Neuregulin-1 modulates the differentiation of neural stem cells in vitro through an interaction with the Swi/Snf complex.	SMARCA2 SMARCA4	1.81e-05	4	61	2	19781646
Pubmed	Brahma safeguards canalization of cardiac mesoderm differentiation.	SMARCA2 SMARCA4	1.81e-05	4	61	2	35082446
Pubmed	BRG1 and BRM function antagonistically with c-MYC in adult cardiomyocytes to regulate conduction and contractility.	SMARCA2 SMARCA4	1.81e-05	4	61	2	28232072
Pubmed	The clinicopathological significance of SWI/SNF alterations in gastric cancer is associated with the molecular subtypes.	SMARCA2 SMARCA4	1.81e-05	4	61	2	33481850
Pubmed	Mitotic inactivation of a human SWI/SNF chromatin remodeling complex.	SMARCA2 SMARCA4	1.81e-05	4	61	2	9744861
Pubmed	Residual complexes containing SMARCA2 (BRM) underlie the oncogenic drive of SMARCA4 (BRG1) mutation.	SMARCA2 SMARCA4	1.81e-05	4	61	2	24421395
Pubmed	Mammalian chromatin remodeling complex SWI/SNF is essential for enhanced expression of the albumin gene during liver development.	SMARCA2 SMARCA4	1.81e-05	4	61	2	16452305
Pubmed	Control of B cell development by the histone H2A deubiquitinase MYSM1.	SMARCA2 SMARCA4	1.81e-05	4	61	2	22169041
Pubmed	Prohibitin and the SWI/SNF ATPase subunit BRG1 are required for effective androgen antagonist-mediated transcriptional repression of androgen receptor-regulated genes.	SMARCA2 SMARCA4	3.02e-05	5	61	2	18487222
Pubmed	Altered control of cellular proliferation in the absence of mammalian brahma (SNF2alpha).	SMARCA2 SMARCA4	3.02e-05	5	61	2	9843504
Pubmed	The SWI/SNF chromatin remodeling complex regulates myocardin-induced smooth muscle-specific gene expression.	SMARCA2 SMARCA4	3.02e-05	5	61	2	19342595
Pubmed	Largest subunits of the human SWI/SNF chromatin-remodeling complex promote transcriptional activation by steroid hormone receptors.	SMARCA2 SMARCA4	3.02e-05	5	61	2	12200431
Pubmed	Dynamic recruitment of functionally distinct Swi/Snf chromatin remodeling complexes modulates Pdx1 activity in islet β cells.	SMARCA2 SMARCA4	3.02e-05	5	61	2	25801033
Pubmed	Interaction of HP1 and Brg1/Brm with the globular domain of histone H3 is required for HP1-mediated repression.	SMARCA2 SMARCA4	3.02e-05	5	61	2	20011120
Pubmed	Prohibitin requires Brg-1 and Brm for the repression of E2F and cell growth.	SMARCA2 SMARCA4	3.02e-05	5	61	2	12065415
Pubmed	KAP1 facilitates reinstatement of heterochromatin after DNA replication.	FARSA FASN NOP9 SSU72 SMARCA2 SMARCA4 CNOT1 NPM3	3.10e-05	704	61	8	29955894
Pubmed	A C/EBP beta isoform recruits the SWI/SNF complex to activate myeloid genes.	SMARCA2 SMARCA4	4.52e-05	6	61	2	10619021
Pubmed	Testing for association between MeCP2 and the brahma-associated SWI/SNF chromatin-remodeling complex.	SMARCA2 SMARCA4	4.52e-05	6	61	2	16940996
Pubmed	Transcriptomic classification of genetically engineered mouse models of breast cancer identifies human subtype counterparts.	SMARCA4 ETV6	4.52e-05	6	61	2	24220145
Pubmed	Roles of Brahma and Brahma/SWI2-related gene 1 in hypoxic induction of the erythropoietin gene.	SMARCA2 SMARCA4	4.52e-05	6	61	2	15347669
Pubmed	The p270 (ARID1A/SMARCF1) subunit of mammalian SWI/SNF-related complexes is essential for normal cell cycle arrest.	SMARCA2 SMARCA4	4.52e-05	6	61	2	16230384
Interaction	CEP85 interactions	RNF214 FASN SYNE3 AMOT ETV6 CNOT1	1.10e-05	169	60	6	int:CEP85
Disease	MENTAL RETARDATION, AUTOSOMAL DOMINANT 12	SMARCA2 SMARCA4	3.92e-05	5	59	2	C3281201
Disease	opportunistic bacterial infectious disease (implicated_via_orthology)	SMARCA2 SMARCA4	1.40e-04	9	59	2	DOID:0050340 (implicated_via_orthology)
Disease	prostate cancer (is_marker_for)	KDM3A ILK SMARCA2 SMARCA4	2.73e-04	156	59	4	DOID:10283 (is_marker_for)
Disease	Coffin-Siris syndrome	SMARCA2 SMARCA4	3.02e-04	13	59	2	C0265338
Disease	ovarian cancer (is_marker_for)	ILK COMT UTRN	3.47e-04	68	59	3	DOID:2394 (is_marker_for)
Disease	colorectal mucinous adenocarcinoma	ETV6 CCDC141	4.63e-04	16	59	2	EFO_0009361
Disease	exploratory eye movement measurement	BIN3 CCDC141 UTRN	5.80e-04	81	59	3	EFO_0007700
Disease	response to corticosteroid	SMARCA2 IQCJ-SCHIP1	1.54e-03	29	59	2	GO_0031960
Disease	myelodysplastic syndrome (is_implicated_in)	ETV6 MTRR	1.65e-03	30	59	2	DOID:0050908 (is_implicated_in)
Disease	Cocaine-Related Disorders	ILK COMT SMARCA4	1.68e-03	117	59	3	C0236736

Protein segments in the cluster

Peptide	Gene	Start	Entry
DHHQQLVAHAARQEP	AMOT	66	Q4VCS5
ELEQNANHPHRIEIQ	BAG5	81	Q9UL15
QAPEHKQEQGVEHRQ	ACRBP	191	Q8NEB7
QDGPHQQSHQESARD	FLG	1091	P20930
NVNQRDVQGRGPLHH	ACAP2	666	Q15057
LVIDHGQDQNPNHHL	CDHR4	516	A6H8M9
HAPQQVRFQHPEENR	IQCN	166	Q9H0B3
IVQDHQEHPGLGNNC	GOLGA8S	596	H3BPF8
ERAQGPRPHQENNHQ	ETV6	216	P41212
NGHAHIPRQTNVGQN	MAML1	776	Q92585
EQNQELIRDPFGHHV	NOP9	586	Q86U38
ARNHDHQEIAVPVAN	NPM3	86	O75607
LQNRQPHHFVVDGEL	NAB1	431	Q13506
LQHREKLQEQHPDGN	MTRR	556	Q9UBK8
RNEVAILQNLHHPGI	PRKD3	621	O94806
LHIRDVNDNAPVFHQ	PCDHGB5	436	Q9Y5G0
EQQLLHHARNGNAEE	OSBPL1A	6	Q9BXW6
ADENHPQRVLRHVQE	SBF1	456	O95248
PQHGLERRHLEANQN	FGFR1OP2	156	Q9NVK5
EQRILNHVLQHAEPG	COMT	56	P21964
LHDAQQQCRDGHPVV	ILVBL	601	A1L0T0
QGQENPADHDPIHDQ	KDM3A	1196	Q9Y4C1
EVHERALQQHPQAQG	CCDC141	1326	Q6ZP82
GHIQEFQHDQELQRI	CYP4A22	61	Q5TCH4
ADINAVNEHGNVPLH	ILK	91	Q13418
HQLDQPGHSDEQRER	BIN3	221	Q9NQY0
VQRAQHVFQHAVPQE	BLMH	46	Q13867
HIDIDPNNAHILDGN	GNPDA2	96	Q8TDQ7
VHVDVQEGNNHRPAF	CDH26	261	Q8IXH8
NHGRQGENQEHLVIA	FATE1	21	Q969F0
HPQALEAAQAELQQH	FASN	1276	P49327
RAHAVDINGNQVENP	CDH2	236	P19022
DLQEHLQHSGQEVPQ	ARHGAP30	21	Q7Z6I6
APQQREGRQQQHHEE	PEX16	191	Q9Y5Y5
RQQHLENELKGQPGH	UTRN	896	P46939
NLENRQNEHHLEGGF	TRIM32	536	Q13049
NRHSIQHVPGDIEQT	RAPGEF6	641	Q8TEU7
HQDLQAQDRAHRIGQ	SMARCA2	1151	P51531
ALFQPQQHPARDQHD	FARSA	261	Q9Y285
EAARPLVQENPNHQH	SYNE3	606	Q6ZMZ3
HQDLQAQDRAHRIGQ	SMARCA4	1181	P51532
RNVHQNIHPENQELV	RNF170	46	Q96K19
HDPQDLRHNGNVVVA	IQCJ-SCHIP1	231	B3KU38
DLIGRHPQQLQHVDE	NPRL2	296	Q8WTW4
ILGAHQEVNLEPHVQ	PLG	636	P00747
DELHGPGALQQQHQQ	POU3F2	116	P20265
EHVRGQEEQPTHQAP	APOBR	941	Q0VD83
RASQQEIQHIVNRHG	CNOT1	26	A5YKK6
HQRIHLGRNPINVVN	ZNF37A	541	P17032
NNRNVHLEHSEQNPG	RNF214	61	Q8ND24
AQHNPEVHVRAEPVQ	SPATA31D1	1441	Q6ZQQ2
QDPQAHIHRNREGNT	TSPYL4	336	Q9UJ04
TVNGEENGAHEINNH	TBL1Y	141	Q9BQ87
NQFDRQQGNPDRHFH	ZNF582	126	Q96NG8
QRIHGDKNVQNPEHG	ZKSCAN4	451	Q969J2
QQNVHNPIRTEEGQA	ZNF792	181	Q3KQV3
RQDAGGILHIHQNVE	TRMT12	326	Q53H54
IQHNPEIGHILNNPE	UBQLN3	201	Q9H347
CQPVHVVNVDIQDNH	SSU72	131	Q9NP77
QLHAAVLRQGHEPQL	TCIRG1	126	Q13488
EHGAQVPQHSRSAQV	MYO7B	1051	Q6PIF6