Cluster composition

Functions

CategoryNameIntersectionWithQueryPValueGenesInTermGenesInQueryGenesInTermInQueryID
GeneOntologyMolecularFunctionhistone H3K9 methyltransferase activity

PRDM2 ASH1L

1.36e-0413272GO:0046974
GeneOntologyMolecularFunctionchromatin binding

KDM3B CHD8 MACROH2A2 STAG2 TOP2B ASH1L

3.83e-04739276GO:0003682
GeneOntologyMolecularFunctionATP-dependent activity, acting on DNA

CHD8 RFC1 TOP2B

6.57e-04127273GO:0008094
GeneOntologyMolecularFunctionhistone H3 methyltransferase activity

PRDM2 ASH1L

1.61e-0344272GO:0140938
GeneOntologyMolecularFunctionhistone modifying activity

KDM3B PRDM2 ASH1L

3.55e-03229273GO:0140993
GeneOntologyMolecularFunctionprotein-lysine N-methyltransferase activity

PRDM2 ASH1L

3.80e-0368272GO:0016279
GeneOntologyMolecularFunctionlysine N-methyltransferase activity

PRDM2 ASH1L

3.91e-0369272GO:0016278
GeneOntologyMolecularFunctionhistone methyltransferase activity

PRDM2 ASH1L

4.13e-0371272GO:0042054
GeneOntologyMolecularFunctioncatalytic activity, acting on DNA

CHD8 RFC1 TOP2B

5.18e-03262273GO:0140097
GeneOntologyBiologicalProcesssister chromatid cohesion

PDS5B STAG2 MEIKIN

1.01e-0467283GO:0007062
GeneOntologyBiologicalProcessnegative regulation of protein depolymerization

MAP1B ADD2 ADD3

2.35e-0489283GO:1901880
GeneOntologyBiologicalProcessregulation of protein polymerization

CCL21 MAP1B ADD2 ADD3

2.54e-04231284GO:0032271
GeneOntologyBiologicalProcesschromosome organization

PDS5B CHD8 RFC1 STAG2 TOP2B MEIKIN

2.67e-04686286GO:0051276
GeneOntologyBiologicalProcessnegative regulation of protein-containing complex disassembly

MAP1B ADD2 ADD3

3.32e-04100283GO:0043242
GeneOntologyBiologicalProcesspositive regulation of transcription by RNA polymerase III

CHD8 ELL

3.33e-0420282GO:0045945
GeneOntologyBiologicalProcessregulation of protein depolymerization

MAP1B ADD2 ADD3

3.83e-04105283GO:1901879
GeneOntologyBiologicalProcesschromatin remodeling

KDM3B CHD8 MACROH2A2 IFI16 PRDM2 ASH1L

4.03e-04741286GO:0006338
HumanPhenoDelayed speech and language development

KDM3B CHD8 RFC1 MAP1B STAG2 NEXMIF ADD3 ASH1L

5.47e-06112388HP:0000750
HumanPhenoLanguage impairment

KDM3B CHD8 RFC1 MAP1B STAG2 NEXMIF ADD3 ASH1L

8.03e-06117888HP:0002463
HumanPhenoHyperactivity

KDM3B CHD8 MAP1B STAG2 NEXMIF ASH1L

3.89e-0555886HP:0000752
HumanPhenoPica

CHD8 ASH1L

6.02e-05882HP:0011856
HumanPhenoAutistic behavior

KDM3B CHD8 MAP1B STAG2 NEXMIF ASH1L

1.20e-0467886HP:0000729
HumanPhenoAttention deficit hyperactivity disorder

KDM3B CHD8 MAP1B STAG2 NEXMIF

1.56e-0441385HP:0007018
HumanPhenoDiagnostic behavioral phenotype

KDM3B CHD8 MAP1B STAG2 NEXMIF ASH1L

2.10e-0474786HP:0025783
HumanPhenoAbnormality of upper lip vermillion

KDM3B CHD8 MAP1B STAG2 NEXMIF

2.73e-0446485HP:0011339
HumanPhenoAbnormal response to social norms

KDM3B CHD8 MAP1B STAG2 NEXMIF ASH1L

3.26e-0480786HP:5200123
HumanPhenoSocial disinhibition

KDM3B CHD8 MAP1B STAG2 NEXMIF ASH1L

3.26e-0480786HP:5200029
HumanPhenoDisinhibition

KDM3B CHD8 MAP1B STAG2 NEXMIF ASH1L

3.26e-0480786HP:0000734
HumanPhenoInappropriate behavior

KDM3B CHD8 MAP1B STAG2 NEXMIF ASH1L

3.26e-0480786HP:0000719
HumanPhenoShort attention span

KDM3B CHD8 MAP1B STAG2 NEXMIF

4.56e-0451785HP:0000736
HumanPhenoReduced attention regulation

KDM3B CHD8 MAP1B STAG2 NEXMIF

4.95e-0452685HP:5200044
HumanPhenoAbnormally increased volition

KDM3B CHD8 MAP1B STAG2 NEXMIF ASH1L

4.97e-0486986HP:5200263
HumanPhenoAbnormal social development

KDM3B CHD8 MAP1B STAG2 NEXMIF ASH1L

6.38e-0490886HP:0025732
HumanPhenoOpen mouth

CHD8 NEXMIF ASH1L

7.21e-0412483HP:0000194
HumanPhenoAbnormal eating behavior

CHD8 NEXMIF ASH1L

7.91e-0412883HP:0100738
HumanPhenoSleep abnormality

CHD8 RFC1 STAG2 NEXMIF ASH1L

8.92e-0459685HP:0002360
HumanPhenoRecurrent hand flapping

CHD8 NEXMIF

9.19e-043082HP:0100023
HumanPhenoAbnormal upper lip morphology

KDM3B CHD8 MAP1B STAG2 NEXMIF ASH1L

9.80e-0498086HP:0000177
HumanPhenoReduced impulse control

KDM3B CHD8 MAP1B STAG2 NEXMIF ASH1L

1.31e-03103286HP:5200045
HumanPhenoRestricted or repetitive behaviors or interests

CHD8 MAP1B NEXMIF ASH1L

1.48e-0336884HP:0031432
HumanPhenoPerseverative thought

CHD8 MAP1B NEXMIF ASH1L

1.63e-0337784HP:0030223
HumanPhenoDisordered formal thought process

CHD8 MAP1B NEXMIF ASH1L

1.78e-0338684HP:0025769
HumanPhenoHypothyroidism

CHD8 STAG2 NEXMIF ASH1L

1.99e-0339884HP:0000821
HumanPhenoDuodenal atresia

KDM3B STAG2

2.07e-034582HP:0002247
HumanPhenoSleep-wake cycle disturbance

CHD8 STAG2

2.07e-034582HP:0006979
HumanPhenoAbnormal thought pattern

CHD8 MAP1B NEXMIF ASH1L

2.11e-0340484HP:5200269
HumanPhenoAbnormality of the chin

KDM3B CHD8 STAG2 NEXMIF

2.21e-0340984HP:0000306
HumanPhenoAbnormality of the philtrum

CHD8 MAP1B STAG2 NEXMIF ASH1L

2.24e-0372685HP:0000288
HumanPhenoImpairment in personality functioning

KDM3B CHD8 MAP1B STAG2 NEXMIF ASH1L

2.29e-03114186HP:0031466
HumanPhenoOverweight

CHD8 ASH1L

2.45e-034982HP:0025502
MousePhenoabsent subplate

MAP1B TOP2B

1.55e-054232MP:0008443
MousePhenoabnormal subplate morphology

MAP1B TOP2B

9.26e-059232MP:0008440
Domain-

ADD2 ADD3

1.12e-0542623.40.225.10
DomainAldolase_II/adducin_N

ADD2 ADD3

1.12e-054262IPR001303
DomainAldolase_II

ADD2 ADD3

1.12e-054262PF00596
DomainAldolase_II

ADD2 ADD3

1.12e-054262SM01007
DomainAT_hook

PDS5B ASH1L

6.40e-0427262SM00384
DomainAT_hook_DNA-bd_motif

PDS5B ASH1L

6.40e-0427262IPR017956
DomainSET

PRDM2 ASH1L

1.48e-0341262PF00856
DomainSET

PRDM2 ASH1L

1.86e-0346262SM00317
DomainSET_dom

PRDM2 ASH1L

2.19e-0350262IPR001214
DomainSET

PRDM2 ASH1L

2.19e-0350262PS50280
DomainNA-bd_OB-fold

PDCD11 IFI16

5.92e-0383262IPR012340
PathwayKEGG_MEDICUS_REFERENCE_ESTABLISHMENT_OF_COHESION

PDS5B STAG2

4.00e-057202M47869
PathwayREACTOME_COHESIN_LOADING_ONTO_CHROMATIN

PDS5B STAG2

8.55e-0510202M27178
PathwayREACTOME_COHESIN_LOADING_ONTO_CHROMATIN

PDS5B STAG2

8.55e-0510202MM14892
PathwayREACTOME_ESTABLISHMENT_OF_SISTER_CHROMATID_COHESION

PDS5B STAG2

1.04e-0411202M27177
PathwayREACTOME_ESTABLISHMENT_OF_SISTER_CHROMATID_COHESION

PDS5B STAG2

1.04e-0411202MM14891
PathwayREACTOME_MITOTIC_TELOPHASE_CYTOKINESIS

PDS5B STAG2

1.48e-0413202M27661
PathwayREACTOME_MITOTIC_TELOPHASE_CYTOKINESIS

PDS5B STAG2

1.48e-0413202MM15363
PathwayREACTOME_IRF3_MEDIATED_INDUCTION_OF_TYPE_I_IFN

IFI16 DTX4

1.48e-0413202M27240
PathwayREACTOME_STING_MEDIATED_INDUCTION_OF_HOST_IMMUNE_RESPONSES

IFI16 DTX4

2.27e-0416202M27045
PathwayREACTOME_MISCELLANEOUS_TRANSPORT_AND_BINDING_EVENTS

ADD2 ADD3

5.63e-0425202MM15172
PathwayREACTOME_MISCELLANEOUS_TRANSPORT_AND_BINDING_EVENTS

ADD2 ADD3

6.09e-0426202M27424
PathwayWP_COHESIN_COMPLEX_CORNELIA_DE_LANGE_SYNDROME

PDS5B STAG2

1.04e-0334202M42555
PathwayREACTOME_S_PHASE

PDS5B RFC1 STAG2

1.09e-03146203MM15378
PathwayREACTOME_S_PHASE

PDS5B RFC1 STAG2

1.50e-03163203M3158
Pubmed

Large-scale characterization of HeLa cell nuclear phosphoproteins.

KDM3B RBM6 PDS5B SCAF1 RFC1 RAPH1 IFI16 PRPF40A STAG2 TOP2B PRDM2

9.41e-12774281115302935
Pubmed

The Nse5/6-like SIMC1-SLF2 complex localizes SMC5/6 to viral replication centers.

RBM6 PDS5B PDCD11 CHD8 BBX RFC1 MAP1B PRPF40A STAG2 ELL TOP2B

8.76e-11954281136373674
Pubmed

Systematic proteomics of endogenous human cohesin reveals an interaction with diverse splicing factors and RNA-binding proteins required for mitotic progression.

KDM3B RBM6 PDS5B PDCD11 PRPF40A STAG2 TOP2B

1.70e-0927228731010829
Pubmed

Interactome Rewiring Following Pharmacological Targeting of BET Bromodomains.

PDS5B CHD8 MACROH2A2 BBX RFC1 PRPF40A TOP2B ASH1L

6.85e-0953328830554943
Pubmed

SRCAP complex promotes lung cancer progression by reprograming the oncogenic transcription of Hippo-YAP/TAZ signaling pathway.

KDM3B PDCD11 CHD8 MAP1B RAPH1 ZNF598 PRPF40A ADD3

8.63e-0954928838280479
Pubmed

The in vivo Interaction Landscape of Histones H3.1 and H3.3.

KDM3B PDS5B CHD8 BBX RFC1 STAG2 TOP2B PRDM2

1.90e-0860828836089195
Pubmed

Functional proteomics establishes the interaction of SIRT7 with chromatin remodeling complexes and expands its role in regulation of RNA polymerase I transcription.

RBM6 PDS5B PDCD11 CHD8 RFC1 MAP1B PRPF40A STAG2

3.30e-0865328822586326
Pubmed

H4K20me0 recognition by BRCA1-BARD1 directs homologous recombination to sister chromatids.

PDCD11 SCAF1 BBX RFC1 IFI16 PRPF40A STAG2 TRAM1 TOP2B PRDM2

3.49e-081294281030804502
Pubmed

Identification of proximal SUMO-dependent interactors using SUMO-ID.

KDM3B CHD8 MAP1B IFI16 PRPF40A TOP2B ADD3

4.95e-0844428734795231
Pubmed

N-Terminal Acetyltransferase Naa40p Whereabouts Put into N-Terminal Proteoform Perspective.

KDM3B RFC1 MAP1B RAPH1 ZNF598 PRPF40A TOP2B ADD3

5.06e-0793428833916271
Pubmed

BAP1 regulation of the key adaptor protein NCoR1 is critical for γ-globin gene repression.

KDM3B PDS5B PDCD11 SCAF1 CHD8 RFC1 PRPF40A TOP2B ADD2

5.65e-07131828930463901
Pubmed

WDR76 Co-Localizes with Heterochromatin Related Proteins and Rapidly Responds to DNA Damage.

PDS5B PDCD11 CHD8 RFC1 MAP1B STAG2

6.21e-0739428627248496
Pubmed

Expression of adducin genes during erythropoiesis: a novel erythroid promoter for ADD2.

ADD2 ADD3

6.25e-07228215963851
Pubmed

Targeted deletion of the gamma-adducin gene (Add3) in mice reveals differences in alpha-adducin interactions in erythroid and nonerythroid cells.

ADD2 ADD3

6.25e-07228219425068
Pubmed

Synthetic Lethal and Resistance Interactions with BET Bromodomain Inhibitors in Triple-Negative Breast Cancer.

KDM3B PDS5B CHD8 RFC1 IFI16 PRPF40A STAG2 TOP2B

9.40e-07101428832416067
Pubmed

Identifying biological pathways that underlie primordial short stature using network analysis.

PDS5B PDCD11 SCAF1 MACROH2A2 MAP1B PRPF40A STAG2 TOP2B

1.01e-06102428824711643
Pubmed

Elf5-centered transcription factor hub controls trophoblast stem cell self-renewal and differentiation through stoichiometry-sensitive shifts in target gene networks.

RFC1 MAP1B PRPF40A TOP2B

1.35e-0610228426584622
Pubmed

MECP2 directly interacts with RNA polymerase II to modulate transcription in human neurons.

RBM6 PDS5B MACROH2A2 BBX MAP1B PRPF40A TOP2B ADD2

1.53e-06108228838697112
Pubmed

PRISMA and BioID disclose a motifs-based interactome of the intrinsically disordered transcription factor C/EBPα.

KDM3B PDS5B CHD8 RFC1 IFI16 STAG2 TOP2B PRDM2

1.76e-06110328834189442
Pubmed

The E3 ubiquitin ligase HECTD1 contributes to cell proliferation through an effect on mitosis.

RBM6 PDS5B PDCD11 MACROH2A2 RFC1 MAP1B TOP2B

1.82e-0675928735915203
Pubmed

Immunofluorescence localization of an adducin-like protein in the chromosomes of mouse oocytes.

ADD2 ADD3

1.87e-0632821864459
Pubmed

Arterial properties in relation to genetic variations in the adducin subunits in a white population.

ADD2 ADD3

1.87e-06328218787518
Pubmed

Epistatic interaction between alpha- and gamma-adducin influences peripheral and central pulse pressures in white Europeans.

ADD2 ADD3

1.87e-06328215834281
Pubmed

Role of the adducin family genes in human essential hypertension.

ADD2 ADD3

1.87e-06328215716695
Pubmed

Gly460Trp alpha-adducin mutation as a possible mechanism leading to endolymphatic hydrops in Ménière's syndrome.

ADD2 ADD3

1.87e-06328218667944
Pubmed

Targeted disruption of the beta adducin gene (Add2) causes red blood cell spherocytosis in mice.

ADD2 ADD3

1.87e-06328210485892
Pubmed

Mapping the Ku Interactome Using Proximity-Dependent Biotin Identification in Human Cells.

CHD8 BBX RFC1 IFI16 TOP2B

2.90e-0628328530585729
Pubmed

KSHV episome tethering sites on host chromosomes and regulation of latency-lytic switch by CHD4.

KDM3B MAP1B IFI16 PRPF40A

3.56e-0613028435545047
Pubmed

beta-adducin (Add2) KO mice show synaptic plasticity, motor coordination and behavioral deficits accompanied by changes in the expression and phosphorylation levels of the alpha- and gamma-adducin subunits.

ADD2 ADD3

3.75e-06428219900187
Pubmed

Combinatorial targeting of a chromatin complex comprising Dot1L, menin and the tyrosine kinase BAZ1B reveals a new therapeutic vulnerability of endocrine therapy-resistant breast cancer.

PDCD11 RFC1 IFI16 PRPF40A TRAM1 ELL TOP2B

3.75e-0684728735850772
Pubmed

ZBTB2 protein is a new partner of the Nucleosome Remodeling and Deacetylase (NuRD) complex.

PDCD11 SCAF1 MACROH2A2 PRPF40A TOP2B

6.13e-0633028533301849
Pubmed

Interactions of the Antiviral Factor Interferon Gamma-Inducible Protein 16 (IFI16) Mediate Immune Signaling and Herpes Simplex Virus-1 Immunosuppression.

PDCD11 MACROH2A2 IFI16 PRPF40A TOP2B

6.31e-0633228525693804
Pubmed

PRP19 transforms into a sensor of RPA-ssDNA after DNA damage and drives ATR activation via a ubiquitin-mediated circuitry.

BBX RFC1 ZNF598 PRPF40A TOP2B

7.08e-0634028524332808
Pubmed

Analysis of Ku70 S155 Phospho-Specific BioID2 Interactome Identifies Ku Association with TRIP12 in Response to DNA Damage.

CHD8 MACROH2A2 RFC1 MAP1B

7.33e-0615628437108203
Pubmed

Proteomic profiling of VCP substrates links VCP to K6-linked ubiquitylation and c-Myc function.

PDS5B PDCD11 CHD8 MACROH2A2 RFC1 MAP1B IFI16 TOP2B

7.96e-06135328829467282
Pubmed

Gain of Additional BIRC3 Protein Functions through 3'-UTR-Mediated Protein Complex Formation.

PDS5B PDCD11 SCAF1 RFC1 PRPF40A STAG2 TOP2B PRDM2

1.16e-05142528830948266
Pubmed

In-Depth In Vivo Crosslinking in Minutes by a Compact, Membrane-Permeable, and Alkynyl-Enrichable Crosslinker.

PDS5B BBX MAP1B RAPH1 STAG2 EFCAB12 TOP2B ASH1L

1.27e-05144228835575683
Pubmed

Functional contribution of Pds5 to cohesin-mediated cohesion in human cells and Xenopus egg extracts.

PDS5B STAG2

1.31e-05728215855230
Pubmed

New nomenclature for chromatin-modifying enzymes.

KDM3B PRDM2 ASH1L

1.33e-055728318022353
Pubmed

The RNA-mediated estrogen receptor α interactome of hormone-dependent human breast cancer cell nuclei.

RBM6 PDCD11 SCAF1 CHD8 BBX ZNF598 STAG2 TRAM1

1.66e-05149728831527615
Pubmed

Distinct roles of cohesin-SA1 and cohesin-SA2 in 3D chromosome organization.

PDS5B STAG2

1.74e-05828229867216
Pubmed

Quantitative analysis of cohesin complex stoichiometry and SMC3 modification-dependent protein interactions.

PDS5B STAG2

1.74e-05828221699228
Pubmed

Sororin is required for stable binding of cohesin to chromatin and for sister chromatid cohesion in interphase.

PDS5B STAG2

2.24e-05928217349791
Pubmed

Human Scc4 is required for cohesin binding to chromatin, sister-chromatid cohesion, and mitotic progression.

PDS5B STAG2

2.24e-05928216682347
Pubmed

Human Wapl is a cohesin-binding protein that promotes sister-chromatid resolution in mitotic prophase.

PDS5B STAG2

2.24e-05928217112726
Pubmed

Targeting SKA3 suppresses the proliferation and chemoresistance of laryngeal squamous cell carcinoma via impairing PLK1-AKT axis-mediated glycolysis.

RFC1 PRPF40A STAG2

2.69e-057228333106477
Pubmed

Biochemical Reduction of the Topology of the Diverse WDR76 Protein Interactome.

CHD8 MACROH2A2 RFC1 MAP1B

2.78e-0521928431353912
Pubmed

Scc1 sumoylation by Mms21 promotes sister chromatid recombination through counteracting Wapl.

PDS5B STAG2

2.80e-051028222751501
Pubmed

Phosphorylation-enabled binding of SGO1-PP2A to cohesin protects sororin and centromeric cohesion during mitosis.

PDS5B STAG2

2.80e-051028223242214
Pubmed

Comprehensive Interactome Mapping of the DNA Repair Scaffold SLX4 Using Proximity Labeling and Affinity Purification.

RBM6 PDS5B PDCD11 ELL

2.93e-0522228437071664
Pubmed

The mouse adducin gene family: alternative splicing and chromosomal localization.

ADD2 ADD3

3.42e-051128210602987
Pubmed

Wapl controls the dynamic association of cohesin with chromatin.

PDS5B STAG2

3.42e-051128217113138
Pubmed

Phosphoproteomic analysis of the developing mouse brain.

PDS5B MAP1B PCDH1 ADD2

4.38e-0524628415345747
Pubmed

SETD1A Methyltransferase Is Physically and Functionally Linked to the DNA Damage Repair Protein RAD18.

SCAF1 CHD8 MACROH2A2 TOP2B

4.73e-0525128431076518
Pubmed

Proteomic analyses reveal distinct chromatin-associated and soluble transcription factor complexes.

MACROH2A2 BBX MAP1B ZNF598 STAG2 TOP2B

5.21e-0585728625609649
Pubmed

Aurora B and Cdk1 mediate Wapl activation and release of acetylated cohesin from chromosomes by phosphorylating Sororin.

PDS5B STAG2

6.52e-051528223901111
Pubmed

Ku antigen, an origin-specific binding protein that associates with replication proteins, is required for mammalian DNA replication.

RFC1 TOP2B

6.52e-051528212393188
Pubmed

Tau interactome maps synaptic and mitochondrial processes associated with neurodegeneration.

MACROH2A2 RAPH1 PCDH1 ADD2 ADD3

7.56e-0555828535063084
Pubmed

The functional interactome landscape of the human histone deacetylase family.

PDCD11 BBX STAG2 ADD3

8.17e-0528928423752268
Pubmed

Human transcription factor protein interaction networks.

RBM6 PDCD11 CHD8 BBX RFC1 PRPF40A PRDM2

1.08e-04142928735140242
Pubmed

A protein-interaction network of interferon-stimulated genes extends the innate immune system landscape.

PDCD11 RFC1 MAP1B IFI16 STAG2 TRAM1 TOP2B

1.13e-04144028730833792
Pubmed

MYC multimers shield stalled replication forks from RNA polymerase.

RBM6 PDCD11 SCAF1 RFC1 PRPF40A TOP2B

1.15e-0498928636424410
Pubmed

STING-Mediated IFI16 Degradation Negatively Controls Type I Interferon Production.

PDCD11 RFC1 MAP1B IFI16

1.15e-0431628431665637
Pubmed

Targeted deletion of alpha-adducin results in absent beta- and gamma-adducin, compensated hemolytic anemia, and lethal hydrocephalus in mice.

ADD2 ADD3

1.18e-042028218723693
Pubmed

MYC Protein Interactome Profiling Reveals Functionally Distinct Regions that Cooperate to Drive Tumorigenesis.

KDM3B PDCD11 CHD8 BBX

1.51e-0433928430415952
Pubmed

NOTCH1 nuclear interactome reveals key regulators of its transcriptional activity and oncogenic function.

RFC1 IFI16 TOP2B

1.53e-0412928323022380
Pubmed

Genome-wide CRISPR-Cas9 Screen Identifies Leukemia-Specific Dependence on a Pre-mRNA Metabolic Pathway Regulated by DCPS.

PDCD11 PRPF40A STAG2 TOP2B

1.53e-0434028429478914
Pubmed

Menin and Menin-Associated Proteins Coregulate Cancer Energy Metabolism.

KDM3B PDS5B CHD8 TOP2B

1.54e-0434128432971831
Pubmed

The functional interactome of PYHIN immune regulators reveals IFIX is a sensor of viral DNA.

PDCD11 MACROH2A2 MAP1B IFI16

1.69e-0434928425665578
Pubmed

The WW domain-containing proteins interact with the early spliceosome and participate in pre-mRNA splicing in vivo.

CHD8 PRPF40A

1.85e-042528215456888
Pubmed

SHLD2/FAM35A co-operates with REV7 to coordinate DNA double-strand break repair pathway choice.

PDS5B RFC1 STAG2

2.38e-0415028330154076
Pubmed

Anticancer sulfonamides target splicing by inducing RBM39 degradation via recruitment to DCAF15.

RBM6 MACROH2A2 MAP1B PRPF40A TOP2B

2.39e-0471428528302793
Pubmed

The Epigenetic Factor Landscape of Developing Neocortex Is Regulated by Transcription Factors Pax6→ Tbr2→ Tbr1.

KDM3B CHD8 ASH1L

2.72e-0415728330186101
Pubmed

Multiple myeloma-associated chromosomal translocation activates orphan snoRNA ACA11 to suppress oxidative stress.

PDCD11 IFI16 TOP2B

2.82e-0415928322751105
Pubmed

The cell proliferation antigen Ki-67 organises heterochromatin.

CHD8 BBX MAP1B IFI16

3.11e-0441028426949251
Pubmed

Proteomic analysis of SRm160-containing complexes reveals a conserved association with cohesin.

PRPF40A STAG2 TOP2B

3.44e-0417028316159877
Pubmed

Gfi1b regulates the level of Wnt/β-catenin signaling in hematopoietic stem cells and megakaryocytes.

KDM3B CHD8

3.45e-043428230894540
Pubmed

Resolution of cell fate decisions revealed by single-cell gene expression analysis from zygote to blastocyst.

KDM3B PDS5B BBX ZNF598 ASH1L

4.21e-0480828520412781
Pubmed

Large-scale identification of mammalian proteins localized to nuclear sub-compartments.

RBM6 RFC1

4.32e-043828211555636
Pubmed

SARS-CoV-2 nucleocapsid protein binds host mRNAs and attenuates stress granules to impair host stress response.

PDCD11 PRPF40A STAG2 ELL

4.93e-0446328434901782
Pubmed

Systematic identification and analysis of mammalian small ubiquitin-like modifier substrates.

TOP2B ADD3

5.03e-044128215561718
Pubmed

In vitro nuclear interactome of the HIV-1 Tat protein.

PDS5B CHD8 RFC1

5.13e-0419528319454010
Pubmed

Dynamic Protein Interactions of the Polycomb Repressive Complex 2 during Differentiation of Pluripotent Cells.

PDS5B CHD8 RFC1 TOP2B

5.17e-0446928427634302
Pubmed

Oncogenic ZMYND11-MBTD1 fusion protein anchors the NuA4/TIP60 histone acetyltransferase complex to the coding region of active genes.

KDM3B TOP2B

5.28e-044228235705031
Pubmed

Thirty new loci for age at menarche identified by a meta-analysis of genome-wide association studies.

KDM3B RBM6

6.33e-044628221102462
Pubmed

Phosphoproteome analysis of the human mitotic spindle.

RFC1 TRAM1 TOP2B

6.36e-0421028316565220
Pubmed

Fibril treatment changes protein interactions of tau and α-synuclein in human neurons.

MACROH2A2 MAP1B RAPH1 STAG2

6.47e-0449828436634849
Pubmed

A probability-based approach for high-throughput protein phosphorylation analysis and site localization.

RBM6 CHD8 RFC1 IFI16

6.72e-0450328416964243
Pubmed

Nuclear actin interactome analysis links actin to KAT14 histone acetyl transferase and mRNA splicing.

KDM3B RAPH1 PRPF40A ADD3

6.87e-0450628430890647
Pubmed

A genome-wide short hairpin RNA screening of jurkat T-cells for human proteins contributing to productive HIV-1 replication.

PDS5B PRDM2 ADD2

7.09e-0421828319460752
Pubmed

Characterizing WW domain interactions of tumor suppressor WWOX reveals its association with multiprotein networks.

KDM3B ZNF598 PRPF40A

7.28e-0422028324550385
Pubmed

TRIM33 drives prostate tumor growth by stabilizing androgen receptor from Skp2-mediated degradation.

KDM3B PRPF40A TOP2B

7.28e-0422028335785414
Pubmed

GRWD1 regulates ribosomal protein L23 levels via the ubiquitin-proteasome system.

PDCD11 RFC1 TOP2B

7.37e-0422128329991511
InteractionNUP43 interactions

PDS5B PDCD11 SCAF1 CHD8 BBX RFC1 IFI16 TOP2B PRDM2 ASH1L

6.07e-096252810int:NUP43
InteractionPDS5A interactions

KDM3B RBM6 PDS5B PDCD11 RFC1 STAG2 TOP2B

3.43e-08245287int:PDS5A
InteractionSMC5 interactions

RBM6 PDS5B PDCD11 CHD8 BBX RFC1 MAP1B PRPF40A STAG2 ELL TOP2B

4.19e-0810002811int:SMC5
InteractionDDX23 interactions

RBM6 PDS5B PDCD11 SCAF1 MAP1B IFI16 PRPF40A TOP2B

2.00e-07480288int:DDX23
InteractionPOLR1G interactions

PDS5B PDCD11 CHD8 BBX RFC1 STAG2 TOP2B PRDM2

2.30e-07489288int:POLR1G
InteractionBRD3 interactions

PDS5B SCAF1 CHD8 MACROH2A2 BBX RFC1 PRPF40A TOP2B

2.49e-07494288int:BRD3
InteractionH3C3 interactions

KDM3B PDS5B CHD8 BBX RFC1 STAG2 TOP2B PRDM2

2.53e-07495288int:H3C3
InteractionH3-3A interactions

KDM3B PDS5B CHD8 BBX RFC1 STAG2 TOP2B PRDM2 ASH1L

4.72e-07749289int:H3-3A
InteractionCENPA interactions

PDS5B PDCD11 BBX RFC1 STAG2 TOP2B PRDM2

6.40e-07377287int:CENPA
InteractionPARP1 interactions

PDS5B PDCD11 SCAF1 MACROH2A2 BBX RFC1 IFI16 PRPF40A STAG2 TOP2B PRDM2

6.74e-0713162811int:PARP1
InteractionWWTR1 interactions

PDCD11 CHD8 MAP1B RAPH1 ZNF598 PRPF40A ADD3

1.36e-06422287int:WWTR1
InteractionH1-4 interactions

PDCD11 SCAF1 BBX RFC1 IFI16 PRPF40A EFCAB12 TOP2B

2.11e-06656288int:H1-4
InteractionH3C1 interactions

PDS5B CHD8 MACROH2A2 BBX RFC1 STAG2 TOP2B PRDM2 ASH1L

2.20e-06901289int:H3C1
InteractionH2BC21 interactions

PDS5B CHD8 MACROH2A2 RFC1 MAP1B IFI16 TOP2B PRDM2

3.27e-06696288int:H2BC21
InteractionH2BC12 interactions

PDS5B SCAF1 MACROH2A2 MAP1B STAG2 TOP2B

4.45e-06322286int:H2BC12
InteractionSIRT7 interactions

RBM6 PDS5B PDCD11 CHD8 RFC1 MAP1B PRPF40A STAG2

5.36e-06744288int:SIRT7
InteractionMEN1 interactions

KDM3B PDS5B PDCD11 CHD8 RFC1 IFI16 PRPF40A TRAM1 TOP2B

6.52e-061029289int:MEN1
InteractionPOLR1E interactions

PDCD11 CHD8 BBX IFI16 ELL TOP2B

7.17e-06350286int:POLR1E
InteractionCOIL interactions

PDS5B PDCD11 CHD8 BBX IFI16 STAG2 TOP2B

7.99e-06552287int:COIL
InteractionMACROH2A2 interactions

PDCD11 MACROH2A2 BBX RFC1 IFI16

9.69e-06211285int:MACROH2A2
InteractionH2BC8 interactions

PDS5B CHD8 MACROH2A2 BBX RFC1 STAG2 TOP2B

1.05e-05576287int:H2BC8
InteractionNUCKS1 interactions

KDM3B MACROH2A2 RFC1 PRPF40A TOP2B

1.19e-05220285int:NUCKS1
InteractionCIT interactions

PDS5B PDCD11 SCAF1 CHD8 MACROH2A2 IFI16 PRPF40A STAG2 TOP2B ASH1L

1.42e-0514502810int:CIT
InteractionSMC1A interactions

PDS5B PDCD11 MACROH2A2 RFC1 ZNF598 STAG2

1.97e-05418286int:SMC1A
InteractionOBSL1 interactions

PDS5B PDCD11 SCAF1 MACROH2A2 RFC1 PRPF40A STAG2 TOP2B

2.18e-05902288int:OBSL1
InteractionCBX3 interactions

PDS5B CHD8 BBX RFC1 IFI16 STAG2 TOP2B

2.21e-05646287int:CBX3
InteractionNIFK interactions

PDCD11 SCAF1 BBX RFC1 IFI16 TOP2B

2.34e-05431286int:NIFK
InteractionFGFBP1 interactions

PDCD11 SCAF1 BBX RFC1 ASH1L

2.51e-05257285int:FGFBP1
InteractionH2BC4 interactions

SCAF1 MACROH2A2 MAP1B STAG2 TOP2B

2.60e-05259285int:H2BC4
InteractionRRP8 interactions

PDCD11 SCAF1 MACROH2A2 RFC1 IFI16

2.60e-05259285int:RRP8
InteractionXRCC6 interactions

CHD8 MACROH2A2 BBX RFC1 MAP1B IFI16 PRPF40A TOP2B

2.68e-05928288int:XRCC6
InteractionPML interactions

KDM3B CHD8 MACROH2A2 MAP1B IFI16 PRPF40A TOP2B ADD3

2.78e-05933288int:PML
InteractionZNF330 interactions

PDS5B PDCD11 BBX RFC1 STAG2 TOP2B

2.83e-05446286int:ZNF330
InteractionCEBPA interactions

KDM3B PDS5B PDCD11 CHD8 RFC1 IFI16 STAG2 TOP2B PRDM2

3.01e-051245289int:CEBPA
InteractionAPEX1 interactions

PDS5B PDCD11 BBX RFC1 RAPH1 ZNF598 STAG2 TOP2B PRDM2

3.55e-051271289int:APEX1
InteractionTOP1 interactions

RBM6 SCAF1 MACROH2A2 RFC1 IFI16 PRPF40A TOP2B

3.57e-05696287int:TOP1
InteractionMAU2 interactions

PDCD11 PRPF40A STAG2 TOP2B

3.58e-05136284int:MAU2
InteractionENO1 interactions

MACROH2A2 MAP1B ZNF598 IFI16 STAG2 NEXMIF PRDM2

3.74e-05701287int:ENO1
InteractionNAA40 interactions

KDM3B RFC1 MAP1B RAPH1 ZNF598 PRPF40A TOP2B ADD3

3.90e-05978288int:NAA40
InteractionMECP2 interactions

RBM6 PDS5B PDCD11 MACROH2A2 BBX MAP1B PRPF40A TOP2B ADD2

3.91e-051287289int:MECP2
InteractionHECTD1 interactions

RBM6 PDS5B PDCD11 MACROH2A2 RFC1 MAP1B PRPF40A TOP2B

4.07e-05984288int:HECTD1
InteractionIFI16 interactions

PDCD11 MACROH2A2 RFC1 MAP1B IFI16 PRPF40A TOP2B

4.20e-05714287int:IFI16
InteractionH2BC15 interactions

PDS5B MACROH2A2 MAP1B ZNF598

4.48e-05144284int:H2BC15
InteractionADARB1 interactions

PDCD11 SCAF1 CHD8 BBX RFC1 TOP2B

4.73e-05489286int:ADARB1
InteractionELF5 interactions

RFC1 MAP1B PRPF40A TOP2B

4.85e-05147284int:ELF5
InteractionTUBA1B interactions

PDS5B MAP1B ZNF598 IFI16 PRPF40A STAG2

5.24e-05498286int:TUBA1B
InteractionSENP3 interactions

PDCD11 BBX RFC1 IFI16 TOP2B

5.33e-05301285int:SENP3
InteractionKIF23 interactions

PDCD11 MACROH2A2 RFC1 IFI16 PRPF40A STAG2 TOP2B ADD2

5.67e-051031288int:KIF23
InteractionNR2C2 interactions

KDM3B PDS5B PDCD11 SCAF1 CHD8 RFC1 PRPF40A TOP2B ADD2

7.69e-051403289int:NR2C2
InteractionCRISP3 interactions

ADD2 ADD3

8.32e-0510282int:CRISP3
InteractionDOT1L interactions

PDCD11 RFC1 IFI16 PRPF40A TRAM1 ELL TOP2B

9.11e-05807287int:DOT1L
InteractionTERF2IP interactions

KDM3B PDS5B CHD8 BBX RFC1 PRPF40A

9.26e-05552286int:TERF2IP
InteractionSTK38 interactions

PDS5B MAP1B ZNF598 IFI16

1.11e-04182284int:STK38
InteractionSLX4 interactions

KDM3B RBM6 PDS5B PDCD11 CHD8 ELL

1.13e-04572286int:SLX4
InteractionAKR7L interactions

RBM6 PDCD11 RFC1

1.34e-0472283int:AKR7L
InteractionWFDC5 interactions

PDS5B STAG2

1.44e-0413282int:WFDC5
InteractionPRG4 interactions

MAP1B PRPF40A

1.68e-0414282int:PRG4
InteractionGNL2 interactions

BBX RFC1 IFI16 ADD2 ADD3

1.72e-04386285int:GNL2
InteractionH2BC13 interactions

PDS5B SCAF1 MAP1B IFI16

1.93e-04210284int:H2BC13
InteractionSNRNP40 interactions

RBM6 PDCD11 SCAF1 RFC1 PRPF40A TOP2B

2.03e-04637286int:SNRNP40
InteractionKLHL20 interactions

PDS5B MACROH2A2 STAG2 TOP2B

2.15e-04216284int:KLHL20
InteractionH2BC3 interactions

PDS5B CHD8 RFC1 MAP1B STAG2

2.17e-04406285int:H2BC3
InteractionSMC3 interactions

PDS5B PDCD11 ZNF598 STAG2 TOP2B

2.22e-04408285int:SMC3
InteractionCHD4 interactions

PDCD11 MACROH2A2 RFC1 ZNF598 IFI16 PRPF40A TOP2B

2.32e-04938287int:CHD4
InteractionNOP2 interactions

PDCD11 MACROH2A2 BBX IFI16 ASH1L

2.43e-04416285int:NOP2
InteractionRPLP0 interactions

PDCD11 SCAF1 MACROH2A2 BBX IFI16 PRPF40A

2.45e-04660286int:RPLP0
InteractionNLE1 interactions

PDCD11 MACROH2A2 IFI16 TOP2B

2.64e-04228284int:NLE1
InteractionZSCAN31 interactions

PDCD11 BBX

2.81e-0418282int:ZSCAN31
InteractionRPL31 interactions

PDS5B PDCD11 SCAF1 BBX RFC1 TOP2B

2.88e-04680286int:RPL31
InteractionSSRP1 interactions

SCAF1 MACROH2A2 RFC1 IFI16 PRPF40A TOP2B

3.00e-04685286int:SSRP1
InteractionGAPDH interactions

KDM3B RFC1 MAP1B ZNF598 PRPF40A TOP2B

3.02e-04686286int:GAPDH
InteractionSNRNP70 interactions

SCAF1 BBX RFC1 MAP1B IFI16 PRPF40A TOP2B

3.11e-04984287int:SNRNP70
InteractionGLYR1 interactions

MACROH2A2 RFC1 IFI16 TOP2B

3.16e-04239284int:GLYR1
InteractionANKRD29 interactions

ADD2 ADD3

3.48e-0420282int:ANKRD29
InteractionZBTB2 interactions

PDCD11 SCAF1 MACROH2A2 PRPF40A TOP2B

3.49e-04450285int:ZBTB2
InteractionDHX40 interactions

RBM6 PDCD11 SCAF1 PRDM2

3.69e-04249284int:DHX40
InteractionSRPK2 interactions

PDCD11 SCAF1 MACROH2A2 PRPF40A EFCAB12 TOP2B

3.83e-04717286int:SRPK2
InteractionDDX21 interactions

PDCD11 MACROH2A2 MAP1B IFI16 PRPF40A STAG2

3.86e-04718286int:DDX21
InteractionPIPSL interactions

MACROH2A2 STAG2 TOP2B ASH1L

3.86e-04252284int:PIPSL
InteractionFEM1A interactions

RBM6 ADD2 ADD3

4.10e-04105283int:FEM1A
InteractionH1-0 interactions

CHD8 MACROH2A2 MAP1B IFI16

4.10e-04256284int:H1-0
InteractionMYCN interactions

RBM6 PDS5B PDCD11 SCAF1 MACROH2A2 BBX MAP1B PRPF40A

4.13e-041373288int:MYCN
InteractionHNRNPU interactions

PDCD11 RFC1 IFI16 PRPF40A STAG2 ELL PRDM2

4.22e-041035287int:HNRNPU
InteractionH2AB2 interactions

PDCD11 SCAF1 BBX

4.33e-04107283int:H2AB2
InteractionRBM39 interactions

RBM6 MACROH2A2 MAP1B IFI16 PRPF40A STAG2 TOP2B

4.40e-041042287int:RBM39
InteractionACTB interactions

MAP1B RAPH1 IFI16 STAG2 TOP2B ADD2 ADD3

5.55e-041083287int:ACTB
InteractionSCARNA22 interactions

PDCD11 IFI16 TOP2B

5.76e-04118283int:SCARNA22
InteractionELL3 interactions

ELL ADD3

5.93e-0426282int:ELL3
InteractionRBBP7 interactions

MAP1B ZNF598 PRPF40A STAG2 ASH1L

6.01e-04507285int:RBBP7
InteractionEPRS1 interactions

PDCD11 MAP1B RAPH1 ZNF598 DTX4

6.34e-04513285int:EPRS1
InteractionHDAC1 interactions

CHD8 BBX RFC1 RAPH1 STAG2 ELL TOP2B

6.36e-041108287int:HDAC1
InteractionCBX1 interactions

KDM3B IFI16 NEXMIF TOP2B

6.38e-04288284int:CBX1
InteractionPSPC1 interactions

RFC1 ZNF598 IFI16 PRPF40A TOP2B

6.46e-04515285int:PSPC1
InteractionDHX8 interactions

RBM6 SCAF1 IFI16 PRPF40A

6.72e-04292284int:DHX8
InteractionTOP2A interactions

PDS5B MACROH2A2 RFC1 IFI16 TOP2B

6.75e-04520285int:TOP2A
InteractionMFAP1 interactions

RBM6 PRPF40A ELL TOP2B

6.98e-04295284int:MFAP1
InteractionCEP164 interactions

PDS5B PDCD11 TOP2B

7.30e-04128283int:CEP164
InteractionRPL15 interactions

PDCD11 MACROH2A2 BBX IFI16 ASH1L

7.35e-04530285int:RPL15
InteractionPNN interactions

RBM6 SCAF1 IFI16 PRPF40A

7.62e-04302284int:PNN
InteractionRPL8 interactions

PDCD11 SCAF1 MACROH2A2 ZNF598 IFI16

7.93e-04539285int:RPL8
Cytoband1q22

IFI16 ASH1L

5.61e-04572821q22
CytobandEnsembl 112 genes in cytogenetic band chr5q31

KDM3B PCDH1 MEIKIN

7.86e-04298283chr5q31
GeneFamilyZinc fingers C2H2-type|Lysine methyltransferases|PR/SET domain family

PRDM2 ASH1L

6.38e-0434202487
GeneFamilyArmadillo repeat containing|Protein phosphatase 1 regulatory subunits

MAP1B ELL

1.68e-02181202694
CoexpressionBUSSLINGER_GASTRIC_IMMUNE_CELLS

PDS5B BBX IFI16 PRPF40A STAG2 TRAM1 ELL TOP2B PRDM2 ASH1L

1.77e-0614922810M40023
CoexpressionHAMAI_APOPTOSIS_VIA_TRAIL_UP

PDS5B BBX RFC1 IFI16 STAG2 TOP2B ADD3

4.46e-06656287M18979
CoexpressionPUJANA_ATM_PCC_NETWORK

KDM3B RBM6 PDS5B RFC1 IFI16 PRPF40A STAG2 TOP2B PRDM2

9.13e-061394289M9585
CoexpressionSMID_BREAST_CANCER_LUMINAL_B_DN

CCL21 MAP1B IFI16 DTX4 ADD2 ADD3

3.04e-05587286M17572
CoexpressionGSE21360_PRIMARY_VS_QUATERNARY_MEMORY_CD8_TCELL_DN

BBX STAG2 TOP2B ADD3

5.61e-05198284M7610
CoexpressionSCHAEFFER_PROSTATE_DEVELOPMENT_AND_CANCER_BOX1_UP

KDM3B PRPF40A

9.93e-0514282M1353
CoexpressionSCHAEFFER_PROSTATE_DEVELOPMENT_AND_CANCER_BOX1_UP

KDM3B PRPF40A

9.93e-0514282MM565
CoexpressionSTEINER_ERYTHROCYTE_MEMBRANE_GENES

ADD2 ADD3

9.93e-0514282M2442
CoexpressionAtlasDevelopingLowerUrinaryTract_e14.5_ bladder_emap-30872_top-relative-expression-ranked_1000

PDS5B RFC1 MAP1B IFI16 PRPF40A TOP2B ADD3 ASH1L

6.89e-06811288gudmap_developingLowerUrinaryTract_e14.5_ bladder_1000
CoexpressionAtlasDevelopingLowerUrinaryTract_e14.5_ bladder_emap-30872_k-means-cluster#5_top-relative-expression-ranked_1000

PDS5B RFC1 MAP1B TOP2B ADD3 ASH1L

1.09e-05397286gudmap_developingLowerUrinaryTract_e14.5_ bladder_1000_k5
CoexpressionAtlasDevelopingLowerUrinaryTract_e13.5_bladder mesenchyme_emap-3087_k-means-cluster#4_top-relative-expression-ranked_500

MAP1B TOP2B ADD3

6.04e-0558283gudmap_developingLowerUrinaryTract_e13.5_bladder mesenchyme_500_k4
CoexpressionAtlasDevelopingLowerUrinaryTract_P1_bladder_J_emap-30374_k-means-cluster#4_top-relative-expression-ranked_200

MAP1B IFI16

7.50e-0510282gudmap_developingLowerUrinaryTract_P1_bladder_J_200_k4
CoexpressionAtlasFacebaseRNAseq_e10.5_Neural Epithelium Overlying Medial Eminence_top-relative-expression-ranked_2500_k-means-cluster#4

PDS5B MAP1B RAPH1 STAG2 DTX4 PRDM2

1.05e-04595286Facebase_RNAseq_e10.5_Neural Epithelium Overlying Medial Eminence_2500_K4
CoexpressionAtlasDevelopingLowerUrinaryTract_e13.5_bladder mesenchyme_emap-3087_top-relative-expression-ranked_500

MACROH2A2 MAP1B IFI16 TOP2B ADD3

2.00e-04420285gudmap_developingLowerUrinaryTract_e13.5_bladder mesenchyme_500
CoexpressionAtlasDevelopingLowerUrinaryTract_e14.5_ bladder_emap-6668_top-relative-expression-ranked_500

PDS5B MAP1B IFI16 PRPF40A TOP2B

2.04e-04422285DevelopingLowerUrinaryTract_e14.5_ bladder_emap-6668_500
CoexpressionAtlasDevelopingLowerUrinaryTract_e14.5_ bladder_emap-6668_k-means-cluster#4_top-relative-expression-ranked_500

PDS5B MAP1B TOP2B

2.38e-0492283DevelopingLowerUrinaryTract_e14.5_ bladder_emap-6668_k4_500
CoexpressionAtlasDevelopingLowerUrinaryTract_e13.5_bladder mesenchyme_emap-3087_k-means-cluster#1_top-relative-expression-ranked_1000

MAP1B TOP2B ADD3

3.14e-04101283gudmap_developingLowerUrinaryTract_e13.5_bladder mesenchyme_1000_k1
CoexpressionAtlasFacebaseRNAseq_e8.5_Floor Plate_top-relative-expression-ranked_1000_k-means-cluster#1

RBM6 MAP1B PRPF40A DTX4

3.52e-04259284Facebase_RNAseq_e8.5_Floor Plate_1000_K1
CoexpressionAtlasDevelopingGonad_e18.5_epididymis_emap-13166_k-means-cluster#2_top-relative-expression-ranked_200

CHD8 ASH1L

4.17e-0423282gudmap_developingGonad_e18.5_epididymis_200_k2
CoexpressionAtlasDevelopingGonad_P2_ovary_emap-30224_top-relative-expression-ranked_1000

CHD8 BBX RFC1 NEXMIF ADD3 ASH1L

4.24e-04770286gudmap_developingGonad_P2_ovary_1000
CoexpressionAtlasDevelopingGonad_e18.5_ovary_emap-12283_top-relative-expression-ranked_1000

CHD8 BBX RFC1 NEXMIF ADD3 ASH1L

4.48e-04778286gudmap_developingGonad_e18.5_ovary_1000
CoexpressionAtlasDevelopingLowerUrinaryTract_P2_bladder detrusor (LCM)_emap-30376_k-means-cluster#5_top-relative-expression-ranked_500

MAP1B IFI16

4.55e-0424282gudmap_developingLowerUrinaryTract_P2_bladder detrusor (LCM)_500_k5
CoexpressionAtlasDevelopingGonad_e12.5_epididymis_emap-29139_top-relative-expression-ranked_1000

RBM6 CHD8 BBX RFC1 NEXMIF ASH1L

5.40e-04806286gudmap_developingGonad_e12.5_epididymis_1000
CoexpressionAtlasFacebaseRNAseq_e8.5_Hind Brain Neural Epithelium_top-relative-expression-ranked_2500_k-means-cluster#3

RBM6 BBX MAP1B PRPF40A DTX4

5.91e-04532285Facebase_RNAseq_e8.5_Hind Brain Neural Epithelium_2500_K3
CoexpressionAtlasDevelopingGonad_e14.5_ testes_emap-6710_top-relative-expression-ranked_1000

RBM6 CHD8 BBX RFC1 PRPF40A NEXMIF

5.99e-04822286gudmap_developingGonad_e14.5_ testes_1000
CoexpressionAtlasDevelopingLowerUrinaryTract_P1_bladder_J_emap-30374_k-means-cluster#5_top-relative-expression-ranked_500

MAP1B IFI16

7.61e-0431282gudmap_developingLowerUrinaryTract_P1_bladder_J_500_k5
CoexpressionAtlasDevelopingGonad_P2_ovary_emap-30224_k-means-cluster#1_top-relative-expression-ranked_1000

BBX RFC1 ADD3

8.31e-04141283gudmap_developingGonad_P2_ovary_1000_k1
CoexpressionAtlasDevelopingLowerUrinaryTract_e14.5_ urogenital sinus_emap-6689_k-means-cluster#2_top-relative-expression-ranked_1000

PDS5B MAP1B TOP2B ASH1L

8.73e-04330284DevelopingLowerUrinaryTract_e14.5_ urogenital sinus_emap-6689_k2_1000
CoexpressionAtlasDevelopingLowerUrinaryTract_P1_ureter_emap-30363_k-means-cluster#4_top-relative-expression-ranked_1000

MAP1B IFI16 TOP2B

1.01e-03151283gudmap_developingLowerUrinaryTract_P1_ureter_1000_k4
CoexpressionAtlasDevelopingGonad_e16.5_ovary_emap-9563_top-relative-expression-ranked_200

CHD8 NEXMIF ASH1L

1.09e-03155283gudmap_developingGonad_e16.5_ovary_200
ToppCelldroplet-Large_Intestine-COLON_PROXIMAL|Large_Intestine / Large_Intestine_Pancreas_Liver - method, tissue, subtissue, age, lineage, cell ontology and free annotation

PRPF40A STAG2 TOP2B ASH1L

5.95e-0619128460c986d2dcbc19d9338c03da6cb5e1d92fd48f8e
ToppCelldroplet-Large_Intestine-COLON_PROXIMAL-30m-Epithelial|Large_Intestine / Large_Intestine_Pancreas_Liver - method, tissue, subtissue, age, lineage, cell ontology and free annotation

PRPF40A STAG2 TOP2B ASH1L

5.95e-0619128409db184cb90fe282a14474d7217068c58092c6f8
ToppCelldroplet-Large_Intestine-COLON_PROXIMAL-30m|Large_Intestine / Large_Intestine_Pancreas_Liver - method, tissue, subtissue, age, lineage, cell ontology and free annotation

PRPF40A STAG2 TOP2B ASH1L

5.95e-06191284973117730d6ba5f127e7a0bfabfd0ff2ca7ac131
ToppCellASK452-Endothelial-Lymphatic|Endothelial / Donor, Lineage and Cell class of Lung cells from Dropseq

CCL21 MAP1B RAPH1 ADD3

6.46e-0619528420f492299a684ac1b7dd1bbc36a533cd6f9a1c93
ToppCell10x5'v1-week_14-16-Lymphocytic_B|week_14-16 / cell types per 3 fetal stages;per 3',per 5'

BBX IFI16 TRAM1 TOP2B

6.72e-0619728431dfd9842410b5c629f39b5130233995dceb0aef
ToppCell10x5'v1-week_14-16-Lymphocytic_B-B_lineage|week_14-16 / cell types per 3 fetal stages;per 3',per 5'

BBX IFI16 TRAM1 TOP2B

6.72e-061972847290f05d0b8465637420119941bcbf2fae44a7e4
ToppCell10x3'2.3-week_17-19-Lymphocytic_B|week_17-19 / cell types per 3 fetal stages;per 3',per 5'

BBX TRAM1 TOP2B PRDM2

6.86e-061982845f465cf5c7493e32d9afe9e9d05757d0a95acc33
ToppCell10x3'2.3-week_17-19-Lymphocytic_B-B_lineage|week_17-19 / cell types per 3 fetal stages;per 3',per 5'

BBX TRAM1 TOP2B PRDM2

6.86e-0619828477ce3fe1ab161c0faf8987e73a64ab61294b9255
ToppCell(03)_KRT6B+-(2)_GFP_FOXI1|(03)_KRT6B+ / shred by cell type by condition

BBX RFC1 MAP1B STAG2

7.00e-06199284c425e7975f492ed5cfcca022248adb627e1d27d4
ToppCellmetastatic_Lymph_Node-Endothelial_cells-Lymphatic_ECs|Endothelial_cells / Location, Cell class and cell subclass

CCL21 ADD3

1.30e-042728284a4a582ec4fcf9d3ab92b553814eada10d0e452
ToppCellkidney_cells-Hypertensive_with+without-CKD-Mesenchymal-Fibroblast-Collagen-low_Matrisome-low_fibroblast|Hypertensive_with+without-CKD / Celltypes from Cells and Nuclei per compartment and clinical group

CCL21 MAP1B RAPH1

1.68e-041722831ef243bce63d841c25e4b74d029d1377f84bcc3d
ToppCellkidney_cells-Hypertensive_with+without-CKD-Mesenchymal-Fibroblast-Collagen-low_Matrisome-low_fibroblast-|Hypertensive_with+without-CKD / Celltypes from Cells and Nuclei per compartment and clinical group

CCL21 MAP1B RAPH1

1.68e-04172283ab1c81be29f93ca8920c6ab5ab92f497a9256d3f
ToppCellASK452-Endothelial-Lymphatic|ASK452 / Donor, Lineage and Cell class of Lung cells from Dropseq

CCL21 RAPH1 ADD2

1.79e-04176283b4d280ecc07701d526f50d44c45ea91b3eeb00b1
ToppCellCalu_3-infected|Calu_3 / Cell line, Condition and Strain

CHD8 IFI16 ASH1L

2.01e-041832838f7f5000645f24f20a8d7700c4df1f8953a1780b
ToppCell5'-Parenchyma_lung-Endothelial-Lymphatic_EC-endothelial_cell_of_lymphatic_vessel-Lymphatic_EC_mature-Lymphatic_EC_mature_L.2.5.3.0|5' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5

CCL21 MAP1B ADD2

2.04e-04184283e5756afa3181186f9b65552b8df5359ef4024bee
ToppCelldroplet-Tongue-nan|Tongue / Tongue_Heart_Limb_Muscle_Aorta_Diaphragm - method, tissue, subtissue, age, lineage, cell ontology and free annotation

MAP1B PRPF40A ASH1L

2.18e-04188283d62cc37e86b7b186e53aeb7f421c4e5ee28f23bd
ToppCell367C-Endothelial_cells-Endothelial-F_(Lymphatics)-|Endothelial_cells / Donor, Lineage, Cell class and subclass (all cells)

CCL21 MAP1B ADD3

2.32e-041922835f4f44f15d3a2846981e68296643a4634930a211
ToppCell367C-Endothelial_cells-Endothelial-F_(Lymphatics)|Endothelial_cells / Donor, Lineage, Cell class and subclass (all cells)

CCL21 MAP1B ADD3

2.32e-041922835e709c0714e8eba27e03a6def0544256bedb3ced
ToppCell(6)_Endothelial_cells-(6)_Endothelial-F_(Lymphatics)|(6)_Endothelial_cells / Lung cell shreds - cell class (v4) and cell subclass (v4)

CCL21 MAP1B ADD3

2.39e-041942839441202d6fa2ffbef9277d48ae9bc98876c26ec5
ToppCellCOPD-Endothelial-Lymphatic|Endothelial / Disease state, Lineage and Cell class

CCL21 MAP1B ADD3

2.42e-04195283e91ce548ae7224661ee5d2f2639794a5f69798ee
ToppCell10x5'v1-week_14-16-Lymphocytic_B-B_lineage-pro_B_progenitor|week_14-16 / cell types per 3 fetal stages;per 3',per 5'

BBX IFI16 TOP2B

2.42e-04195283dc84a910b6f6eb9994cd683aa4fd813a82198e5f
ToppCell(1)_T_cells-(1)_T_CD4_naive|(1)_T_cells / Spleen cell shreds - cell class (v1) and cell subclass (v1)

RBM6 ADD2 ASH1L

2.42e-04195283d3fa551bc6f5ee5890af1040415e61ecd5d46201
ToppCellIPF-Endothelial-Lymphatic|Endothelial / Disease state, Lineage and Cell class

CCL21 MAP1B ADD3

2.42e-04195283de88e9d22044b4b3e29676ad02b3e9299cc920ad
ToppCell343B-Endothelial_cells-Endothelial-F_(Lymphatics)-|Endothelial_cells / Donor, Lineage, Cell class and subclass (all cells)

CCL21 MAP1B ADD3

2.42e-04195283fc75f04eb475c8139cc5c35e6be22e73fb2be9e6
ToppCell343B-Endothelial_cells-Endothelial-F_(Lymphatics)|Endothelial_cells / Donor, Lineage, Cell class and subclass (all cells)

CCL21 MAP1B ADD3

2.42e-0419528383d45ff5e5bc704448431149fffb2e4c1278f279
ToppCellControl-Endothelial-Lymphatic|Endothelial / Disease state, Lineage and Cell class

CCL21 MAP1B ADD3

2.46e-04196283e0cf617b0f5d9c3c19574f587a3d0ccbf93d8ca4
ToppCellfacs-Bladder-nan-3m|Bladder / Skin_Bladder_Kidney_Mammary_Gland - method, tissue, subtissue, age, lineage, cell ontology and free annotation

TRAM1 TOP2B ADD3

2.46e-0419628344f5b1b474399c9316729155f2ea95a82ca66e30
ToppCell356C-Endothelial_cells-Endothelial-F_(Lymphatics)-|Endothelial_cells / Donor, Lineage, Cell class and subclass (all cells)

CCL21 MAP1B ADD3

2.46e-04196283b04ca69b0ed44e09c989b575f747e1e819cd8008
ToppCell356C-Endothelial_cells-Endothelial-F_(Lymphatics)|Endothelial_cells / Donor, Lineage, Cell class and subclass (all cells)

CCL21 MAP1B ADD3

2.46e-04196283a31e227de2dc077b81881295b012d22fedbd65ed
ToppCellfacs-Bladder-nan-3m-Epithelial|Bladder / Skin_Bladder_Kidney_Mammary_Gland - method, tissue, subtissue, age, lineage, cell ontology and free annotation

TRAM1 TOP2B ADD3

2.46e-04196283c0e90d964baa2eb4fbd18a52379ccec5d3bf59a8
ToppCellEndothelial_cells-Endothelial-B|Endothelial_cells / lung cells shred on cell class, cell subclass, sample id

CCL21 MAP1B ADD3

2.46e-0419628336f95f9ef74eb951e41ef46fd136ceaef45208fc
ToppCell390C-Endothelial_cells-Endothelial-F_(Lymphatics)-|Endothelial_cells / Donor, Lineage, Cell class and subclass (all cells)

CCL21 MAP1B ADD3

2.50e-04197283c84e988c2ad06087aafda9e3b68e9e72fd0e75f1
ToppCellnormal_Lung-Endothelial_cells-Lymphatic_ECs|Endothelial_cells / Location, Cell class and cell subclass

CCL21 MAP1B ADD3

2.50e-04197283c838d0f64e3b43a616a9e381b8139bfe9aa32da7
ToppCell390C-Endothelial_cells-Endothelial-F_(Lymphatics)|Endothelial_cells / Donor, Lineage, Cell class and subclass (all cells)

CCL21 MAP1B ADD3

2.50e-041972836195f945b3fd6da07907619267d49e96d1044f8f
ToppCelltumor_Lung-Endothelial_cells-Lymphatic_ECs|Endothelial_cells / Location, Cell class and cell subclass

CCL21 MAP1B ADD3

2.50e-04197283a05237ee6d31d9eab491dd7007859d6285cf1424
ToppCelldistal-Endothelial-Lymphatic-3|distal / Location, Lineage, Cell class (ontology) and Donor from 10X sequencing (macrophage renamed)

CCL21 MAP1B ADD3

2.50e-041972838f2e19409ebe9a490d5a245fa82c765ed6d77c3e
ToppCellTransplant_Alveoli_and_parenchyma-Endothelial-Lymphatic|Endothelial / Tissue, Lineage and Cell class of Lung Cells from 10X

CCL21 MAP1B ADD3

2.54e-041982837a99c341736a4a2ac48ef8e2f7951f21a7378946
ToppCellsystemic_lupus_erythematosus-flare|systemic_lupus_erythematosus / PBMC cell types (v2) per disease, treatment status, and sex

IFI16 ADD3 ASH1L

2.54e-041982834c93ee921d56132d80832d8e94563f32ccf13bbc
ToppCellLAM-Endothelial-LymEndo|Endothelial / Condition, Lineage and Cell class

CCL21 MAP1B ADD3

2.54e-04198283ba64b1c95dfaa995045239d412e725596f6c482e
ToppCellILEUM-inflamed-(8)_Fibroblast-(8)_Pericytes|(8)_Fibroblast / shred on tissue, inflammation_status, cell class(v3), cell subclass (v2)

CCL21 MAP1B PCDH1

2.54e-041982835e274c5597d8720290d452465f0bd40637cb3f27
ToppCell(05)_Secretory-(2)_GFP_FOXI1|(05)_Secretory / shred by cell type by condition

PRPF40A STAG2 TRAM1

2.57e-04199283d72d87e1e530ed894c0ad5e7b5b2b1d6b59fa098
ToppCellNS-control-d_0-4-Epithelial-Secretory|d_0-4 / Location, Severity, dps_group, Lineage and Cell class of Upper airway (combined)

RAPH1 IFI16 DTX4

2.57e-0419928332bdfff40fd442b88489c8b0f79af3927a51a03c
ToppCell(10)_Ciliated-(2)_GFP_FOXI1|(10)_Ciliated / shred by cell type by condition

PRPF40A STAG2 TRAM1

2.57e-0419928361b1ed2db71b96157b92b7535d1955a4033098da
ToppCellcontrol-Epithelial-Secretory|control / Severity, Lineage and Cell class of Nasopharyngeal (NS) Samples from Patients and Controls

RAPH1 IFI16 DTX4

2.57e-04199283262e5b8a52c8ddb0b47048c786e8bdb7158e1b9a
ToppCell368C-Fibroblasts-Fibroblast-D-|Fibroblasts / Donor, Lineage, Cell class and subclass (all cells)

IFI16 TRAM1 ADD3

2.57e-041992838766796041965a1ba40ad7abdbc244bf1418c209
ToppCell(09)_Interm._secr.>cil.-(2)_GFP_FOXI1|(09)_Interm._secr.>cil. / shred by cell type by condition

PRPF40A STAG2 TRAM1

2.57e-04199283fc680f85ebd3bab4c72876a19a461b0afb5f51ce
ToppCellFrontal_cortex-Neuronal|Frontal_cortex / BrainAtlas - Mouse McCarroll V32

MAP1B NEXMIF ADD2

2.57e-04199283f88039d862f3bfa01dc39d2de4f3f548dc5a0e61
ToppCell356C-Fibroblasts-Fibroblast-J_(Lipofibroblast)|Fibroblasts / Donor, Lineage, Cell class and subclass (all cells)

CCL21 IFI16 ADD2

2.57e-04199283f4fdf94c561dca35bb17766d908c5030655f43eb
ToppCellCaecum-T_cell-Activated_CD4_T|T_cell / Region, Cell class and subclass

ADD2 ADD3 ASH1L

2.57e-0419928313173cc4dcc8e856680372b0a4ad4f36afa892c1
ToppCell368C-Fibroblasts-Fibroblast-D|Fibroblasts / Donor, Lineage, Cell class and subclass (all cells)

IFI16 TRAM1 ADD3

2.57e-04199283d39b40d84c72bdde756b805063317ecfad3784f8
ToppCell356C-Fibroblasts-Fibroblast-J_(Lipofibroblast)-|Fibroblasts / Donor, Lineage, Cell class and subclass (all cells)

CCL21 IFI16 ADD2

2.57e-04199283c0fe99ed906d0eb99cccdab9a1fa32c17b3542e7
ToppCellLPS_IL1RA-Endothelial-Endothelial-Gen_Cap|LPS_IL1RA / Treatment groups by lineage, cell group, cell type

IFI16 ADD3 ASH1L

2.61e-04200283dccec522ab0d7fff62ad6273b02aa9022dbbb8eb
ToppCellBrain_organoid-organoid_Tanaka_cellReport-3m-Neuronal-Neuron|3m / Sample Type, Dataset, Time_group, and Cell type.

MACROH2A2 BBX MAP1B

2.61e-042002833d134ae3c48ff4d1849db4fbe44ff73fb6c8c779
ToppCellmild|World / Cohort 1 (10x PBMC) with disease condition, cell group and cell class

IFI16 PRDM2 ASH1L

2.61e-0420028312f1685ce8f218433068e090c9d839cd5a1910bf
ComputationalGenes upregulated in subsets of cells of a given type within various tumors

RBM6 PRDM2 ASH1L

8.71e-0550193GAVISH_3CA_METAPROGRAM_B_CELLS_B_CELLS_1
Drug9-chloroacridine

CCL21 TOP2B

2.18e-056282CID000071013
Drugliriodenine

PDS5B TOP2B

5.22e-059282CID000010144
DrugICI 182,780; Down 200; 1uM; MCF7; HT_HG-U133A_EA

PDS5B PRPF40A STAG2 ADD3

6.25e-05177284985_DN
DrugTrichostatin A, from Streptomyces sp.; Down 200; 0.1uM; PC3; HT_HG-U133A

KDM3B PDS5B MACROH2A2 IFI16

6.53e-051792846609_DN
DrugCaptopril [62571-86-2]; Down 200; 17.2uM; PC3; HT_HG-U133A

BBX PRPF40A STAG2 ADD3

6.53e-051792844585_DN
Drugtrichostatin A, Streptomyces sp.; Down 200; 1uM; PC3; HT_HG-U133A

PDS5B MACROH2A2 IFI16 STAG2

6.67e-051802846886_DN
DrugNeostigmine bromide [114-80-7]; Down 200; 13.2uM; PC3; HT_HG-U133A

BBX IFI16 PRPF40A PRDM2

7.89e-051882846735_DN
DrugAcetohexamide [968-81-0]; Up 200; 12.4uM; PC3; HT_HG-U133A

IFI16 PCDH1 PRDM2 ADD3

8.56e-051922841829_UP
DrugAG-013608 [351320-38-2]; Up 200; 10uM; MCF7; HT_HG-U133A

CCL21 IFI16 PCDH1 ADD2

8.74e-051932845904_UP
DrugFenbufen [36330-85-5]; Down 200; 15.8uM; MCF7; HT_HG-U133A

RBM6 MACROH2A2 ELL DTX4

9.09e-051952842308_DN
Drugsulfosuccinimidobiotin

CCL21 MAP1B

9.55e-0512282CID000083894
Drugpioglitazone HCl; Up 200; 10uM; MCF7; HT_HG-U133A

MAP1B PCDH1 ELL PRDM2

9.65e-051982847083_UP
Diseasespastic quadriplegic cerebral palsy 3 (implicated_via_orthology)

ADD2 ADD3

2.60e-063282DOID:0081361 (implicated_via_orthology)
Diseasecerebral palsy (implicated_via_orthology)

ADD2 ADD3

3.89e-0510282DOID:1969 (implicated_via_orthology)
DiseaseIntellectual Disability

KDM3B CHD8 MAP1B STAG2 ASH1L

5.75e-05447285C3714756
Diseasemean reticulocyte volume

RBM6 PDS5B RFC1 RAPH1 STAG2 NEXMIF

8.75e-05799286EFO_0010701
DiseaseMyeloid Leukemia

STAG2 TOP2B

1.32e-0418282C0023470
DiseaseLeukemia, Monocytic, Chronic

STAG2 TOP2B

1.32e-0418282C0023466
Diseaseperiodontal measurement

IFI16 ASH1L

2.37e-0424282EFO_0007780
Diseaseautism spectrum disorder (implicated_via_orthology)

CHD8 NEXMIF ASH1L

3.99e-04152283DOID:0060041 (implicated_via_orthology)
Diseaseosteoarthritis

RBM6 RAPH1 PRDM2

1.20e-03222283MONDO_0005178
Diseaseserum albumin measurement

SCAF1 BBX RAPH1 ELL

2.24e-03592284EFO_0004535
Diseaseage at menarche

KDM3B RBM6 PRPF40A PRDM2

2.27e-03594284EFO_0004703
DiseaseNeurodevelopmental Disorders

NEXMIF ASH1L

3.52e-0393282C1535926
Diseasepuberty onset measurement

PRPF40A PRDM2

6.26e-03125282EFO_0005677
Diseasehypertension (implicated_via_orthology)

ADD2 ADD3

6.56e-03128282DOID:10763 (implicated_via_orthology)
DiseaseGlobal developmental delay

KDM3B STAG2

7.06e-03133282C0557874
DiseaseBladder Neoplasm

STAG2 PRDM2

7.79e-03140282C0005695
DiseaseMalignant neoplasm of urinary bladder

STAG2 PRDM2

7.90e-03141282C0005684
Diseasefibrinogen measurement, coronary artery disease

RAPH1 ELL

9.36e-03154282EFO_0001645, EFO_0004623

Protein segments in the cluster

PeptideGeneStartEntry
KSSKTKPKKLGTGTT

ASH1L

231

Q9NR48
KTGKKGKGSKGCKRT

CCL21

111

O00585
PKKSKTSGASKTKGK

CHD8

516

Q9HCK8
GSPSRSKPKKKSKKH

ELL

441

P55199
GTSGSKKFKKTKPKE

BBX

666

Q8WY36
GSPSKSPSKKKKKFR

ADD3

676

Q9UEY8
GKKSKAAKPRTSKKS

MACROH2A2

146

Q9P0M6
SRKTTKKQAKKGKTP

DTX4

376

Q9Y2E6
GKSKRTDKKTPKKSK

EFCAB12

461

Q6NXP0
PGKKTSKTSSPGGKK

RAPH1

956

Q70E73
PTMKTSKKGSKKKSG

PDS5B

1306

Q9NTI5
EKTKTKKPGTKTKSS

MAP1B

2241

P46821
KKPGTKTKSSSPVKK

MAP1B

2246

P46821
SKGNKSKGKKSKSPK

PCDH1

906

Q08174
GGTLKAVKSSKGKKK

KDM3B

261

Q7LBC6
KKKKTNSSTPGKKNR

MEIKIN

256

A0A087WXM9
RSESKHKSPKKKTGK

PRPF40A

911

O75400
KSTKEKAGPKGSKVS

IFI16

131

Q16666
SKRSSPKSRKGKKKS

PRDM2

161

Q13029
KEKKPTSQGKSSSKK

RBM6

831

P78332
GRKTSKTTSKKPKKT

TOP2B

1561

Q02880
KLKGETKTPKKTKSS

RFC1

346

P35251
KVSKSRKKSSPSKSG

NEXMIF

1171

Q5QGS0
GSPSKSPSKKKKKFR

ADD2

696

P35612
STKRKKSQKGPAKTK

PDCD11

41

Q14690
RSKKSKPSTGKRKVV

STAG2

1071

Q8N3U4
AGAKKTKGTKGKTKP

SCAF1

906

Q9H7N4
TKGTKGKTKPSKTRK

SCAF1

911

Q9H7N4
GKTKPSKTRKKVRSG

SCAF1

916

Q9H7N4
KVGKKKKVGSEKPGT

ZNF598

586

Q86UK7
KKPTVTKGRSSKKGT

TRAM1

336

Q15629