Cluster composition

Functions

CategoryNameIntersectionWithQueryPValueGenesInTermGenesInQueryGenesInTermInQueryID
GeneOntologyMolecularFunctionpiRNA binding

PIWIL1 PIWIL4 PIWIL3

2.00e-066943GO:0034584
GeneOntologyMolecularFunctionL-cystine transmembrane transporter activity

SLC1A4 SLC3A1

1.31e-044942GO:0015184
GeneOntologyCellularComponentpole plasm

PIWIL1 PIWIL4 PIWIL3

2.96e-0429943GO:0045495
GeneOntologyCellularComponentgerm plasm

PIWIL1 PIWIL4 PIWIL3

2.96e-0429943GO:0060293
GeneOntologyCellularComponentP granule

PIWIL1 PIWIL4 PIWIL3

2.96e-0429943GO:0043186
GeneOntologyCellularComponentaryl hydrocarbon receptor complex

ARNT ARNT2

5.50e-048942GO:0034751
DomainPIWI

PIWIL1 PIWIL4 PIWIL3

6.36e-068923PS50822
DomainPiwi

PIWIL1 PIWIL4 PIWIL3

6.36e-068923SM00950
DomainPiwi

PIWIL1 PIWIL4 PIWIL3

6.36e-068923IPR003165
DomainPiwi

PIWIL1 PIWIL4 PIWIL3

6.36e-068923PF02171
DomainPAZ

PIWIL1 PIWIL4 PIWIL3

9.51e-069923PS50821
DomainPAZ

PIWIL1 PIWIL4 PIWIL3

9.51e-069923SM00949
DomainPAZ_dom

PIWIL1 PIWIL4 PIWIL3

9.51e-069923IPR003100
DomainPAZ

PIWIL1 PIWIL4 PIWIL3

9.51e-069923PF02170
DomainPAS_fold_3

HIF1A ARNT ARNT2

1.91e-0423923IPR013655
DomainPAS_3

HIF1A ARNT ARNT2

1.91e-0423923PF08447
DomainPAS-assoc_C

HIF1A ARNT ARNT2

2.17e-0424923IPR000700
DomainPAS

HIF1A ARNT ARNT2

2.46e-0425923PF00989
DomainPAS_fold

HIF1A ARNT ARNT2

2.46e-0425923IPR013767
DomainPAC

HIF1A ARNT ARNT2

2.77e-0426923IPR001610
DomainPAC

HIF1A ARNT ARNT2

2.77e-0426923SM00086
DomainPAC

HIF1A ARNT ARNT2

2.77e-0426923PS50113
DomainC2

OTOF CADPS SYT14 PLCB2 BCR

4.75e-04131925PF00168
DomainPAS

HIF1A ARNT ARNT2

5.17e-0432923SM00091
DomainC2

OTOF CADPS SYT14 PLCB2 BCR

5.82e-04137925SM00239
DomainPAS

HIF1A ARNT ARNT2

6.20e-0434923IPR000014
DomainPAS

HIF1A ARNT ARNT2

6.20e-0434923PS50112
DomainNuc_translocat

ARNT ARNT2

6.59e-048922IPR001067
DomainC2

OTOF CADPS SYT14 PLCB2 BCR

6.85e-04142925PS50004
DomainC2_dom

OTOF CADPS SYT14 PLCB2 BCR

1.31e-03164925IPR000008
Domain-

PIWIL1 PIWIL4 PIWIL3

1.60e-03479233.30.420.10
Domain-

CSMD2 ZZEF1 CRHBP

2.15e-03529232.60.120.290
DomainPI3/4_kinase_CS

PI4KA ATM

2.42e-0315922IPR018936
Domain-

PI4KA ATM

2.75e-03169221.10.1070.11
DomainPI3Kc

PI4KA ATM

2.75e-0316922SM00146
DomainCUB_dom

CSMD2 ZZEF1 CRHBP

2.79e-0357923IPR000859
DomainPI3/4_kinase_cat_dom

PI4KA ATM

3.49e-0318922IPR000403
DomainPI3_PI4_kinase

PI4KA ATM

3.49e-0318922PF00454
DomainPI3_4_KINASE_3

PI4KA ATM

3.49e-0318922PS50290
DomainPI3_4_KINASE_1

PI4KA ATM

3.49e-0318922PS00915
DomainPI3_4_KINASE_2

PI4KA ATM

3.49e-0318922PS00916
DomainZinc_finger_PHD-type_CS

ZMYND11 ASH1L PHF21A

4.05e-0365923IPR019786
DomainRNaseH-like_dom

PIWIL1 PIWIL4 PIWIL3

4.79e-0369923IPR012337
DomainKinase-like_dom

JAK1 FLT1 DST PI4KA AAK1 ATM CDK14 CDC7

5.27e-03542928IPR011009
DomainPHD

ZMYND11 ASH1L PHF21A

6.05e-0375923PF00628
Pubmed

Genetic variants in Piwi-interacting RNA pathway genes confer susceptibility to spermatogenic failure in a Chinese population.

PIWIL1 PIWIL4 PIWIL3

8.14e-08496320940137
Pubmed

Expression of ARNT, ARNT2, HIF1 alpha, HIF2 alpha and Ah receptor mRNAs in the developing mouse.

HIF1A ARNT ARNT2

2.03e-0759639545558
Pubmed

Isolation and characterization of AINT: a novel ARNT interacting protein expressed during murine embryonic development.

HIF1A ARNT ARNT2

4.05e-07696311025203
Pubmed

Separate necdin domains bind ARNT2 and HIF1alpha and repress transcription.

HIF1A ARNT ARNT2

4.05e-07696317826745
Pubmed

Two new members of the murine Sim gene family are transcriptional repressors and show different expression patterns during mouse embryogenesis.

HIF1A ARNT ARNT2

4.05e-0769638927054
Pubmed

A novel bHLH-PAS factor with close sequence similarity to hypoxia-inducible factor 1alpha regulates the VEGF expression and is potentially involved in lung and vascular development.

FLT1 HIF1A ARNT

7.08e-0779639113979
Pubmed

Differential activities of murine single minded 1 (SIM1) and SIM2 on a hypoxic response element. Cross-talk between basic helix-loop-helix/per-Arnt-Sim homology transcription factors.

HIF1A ARNT ARNT2

1.13e-06896311782478
Pubmed

Identification of eight members of the Argonaute family in the human genome.

PIWIL1 PIWIL4 PIWIL3

1.69e-06996312906857
Pubmed

Prediction of the coding sequences of mouse homologues of KIAA gene: III. the complete nucleotide sequences of 500 mouse KIAA-homologous cDNAs identified by screening of terminal sequences of cDNA clones randomly sampled from size-fractionated libraries.

TRMT6 PPP2R5C DST AAK1 LHFPL2 CDK14 ZZEF1 BCR PHF21A CEMIP2

2.13e-06529961014621295
Pubmed

HIF-dependent hematopoietic factors regulate the development of the embryonic vasculature.

HIF1A ARNT ARNT2

2.41e-061096316824955
Pubmed

Detrimental effects of hypoxia on glomerular podocytes.

HIF1A ARNT

7.54e-06296233835424
Pubmed

Divergent expression patterns for hypoxia-inducible factor-1beta and aryl hydrocarbon receptor nuclear transporter-2 in developing kidney.

ARNT ARNT2

7.54e-06296215466261
Pubmed

A HIF-1α-driven feed-forward loop augments HIF signalling in Hep3B cells by upregulation of ARNT.

HIF1A ARNT

7.54e-06296227362802
Pubmed

ATR Restrains DNA Synthesis and Mitotic Catastrophe in Response to CDC7 Inhibition.

ATM CDC7

7.54e-06296232877678
Pubmed

Hypoxia-inducible factor-dependent histone deacetylase activity determines stem cell fate in the placenta.

HIF1A ARNT

7.54e-06296215987772
Pubmed

Hypoxia-inducible factor-1alpha regulates beta cell function in mouse and human islets.

HIF1A ARNT

7.54e-06296220440072
Pubmed

Molecular characterization of the murine Hif-1 alpha locus.

HIF1A ARNT

7.54e-0629629368100
Pubmed

Purification and characterization of hypoxia-inducible factor 1.

HIF1A ARNT

7.54e-0629627836384
Pubmed

Dissecting hypoxia-dependent and hypoxia-independent steps in the HIF-1alpha activation cascade: implications for HIF-1alpha gene therapy.

HIF1A ARNT

7.54e-06296211606485
Pubmed

Hypoxia-inducible factor 1 is a basic-helix-loop-helix-PAS heterodimer regulated by cellular O2 tension.

HIF1A ARNT

7.54e-0629627539918
Pubmed

Development of inhibitors of the PAS-B domain of the HIF-2α transcription factor.

HIF1A ARNT

7.54e-06296223363003
Pubmed

Role of hypoxia-inducible factor-1 in transcriptional activation of ceruloplasmin by iron deficiency.

HIF1A ARNT

7.54e-06296210777486
Pubmed

Contribution of the Per/Arnt/Sim (PAS) domains to DNA binding by the basic helix-loop-helix PAS transcriptional regulators.

HIF1A ARNT

7.54e-06296214638687
Pubmed

Hypoxia-inducible factor-1β is essential for upregulation of the hypoxia-induced FLT1 gene in placental trophoblasts.

FLT1 ARNT

7.54e-06296234665260
Pubmed

HIF-dependent regulation of claudin-1 is central to intestinal epithelial tight junction integrity.

HIF1A ARNT

7.54e-06296225904334
Pubmed

Activation of hypoxia-inducible factor 1alpha: posttranscriptional regulation and conformational change by recruitment of the Arnt transcription factor.

HIF1A ARNT

7.54e-0629629159130
Pubmed

The role of ARNT2 in tumor angiogenesis and the neural response to hypoxia.

HIF1A ARNT

7.54e-06296210873592
Pubmed

Selective inhibition of MEK1/2 reveals a differential requirement for ERK1/2 signalling in the regulation of HIF-1 in response to hypoxia and IGF-1.

HIF1A ARNT

7.54e-06296217213817
Pubmed

Crystal structure of human CDC7 kinase in complex with its activator DBF4.

DBF4 CDC7

7.54e-06296223064647
Pubmed

Induction of phosphoglycerate kinase 1 gene expression by hypoxia. Roles of Arnt and HIF1alpha.

HIF1A ARNT

7.54e-0629628702901
Pubmed

Hypoxia regulates the expression of the neuromedin B receptor through a mechanism dependent on hypoxia-inducible factor-1α.

HIF1A NMBR

7.54e-06296224349381
Pubmed

A dominant-negative isoform of hypoxia-inducible factor-1 alpha specifically expressed in human testis.

HIF1A ARNT

7.54e-06296215031145
Pubmed

Hypoxia-inducible factor 1 transcriptional activity in endothelial cells is required for acute phase cardioprotection induced by ischemic preconditioning.

HIF1A ARNT

7.54e-06296222699503
Pubmed

Reduction of hypoxia-induced transcription through the repression of hypoxia-inducible factor-1alpha/aryl hydrocarbon receptor nuclear translocator DNA binding by the 90-kDa heat-shock protein inhibitor radicicol.

HIF1A ARNT

7.54e-06296212391259
Pubmed

Expression of vascular endothelial growth factor receptor 1 in bone marrow-derived mesenchymal cells is dependent on hypoxia-inducible factor 1.

FLT1 HIF1A

7.54e-06296216574650
Pubmed

Non-hypoxic transcriptional activation of the aryl hydrocarbon receptor nuclear translocator in concert with a novel hypoxia-inducible factor-1alpha isoform.

HIF1A ARNT

7.54e-06296215479785
Pubmed

Tungsten carbide cobalt nanoparticles exert hypoxia-like effects on the gene expression level in human keratinocytes.

HIF1A YY1

7.54e-06296220105288
Pubmed

Yin Yang 1 facilitates hepatocellular carcinoma cell lipid metabolism and tumor progression by inhibiting PGC-1β-induced fatty acid oxidation.

PPARGC1B YY1

7.54e-06296231695789
Pubmed

Induction and nuclear translocation of hypoxia-inducible factor-1 (HIF-1): heterodimerization with ARNT is not necessary for nuclear accumulation of HIF-1alpha.

HIF1A ARNT

7.54e-06296210085255
Pubmed

Expression of hypoxia-inducible factor 1: mechanisms and consequences.

HIF1A ARNT

7.54e-06296210605934
Pubmed

Unique and overlapping transcriptional roles of arylhydrocarbon receptor nuclear translocator (Arnt) and Arnt2 in xenobiotic and hypoxic responses.

ARNT ARNT2

7.54e-06296217023418
Pubmed

Site-directed mutagenesis studies of the hypoxia-inducible factor-1alpha DNA-binding domain.

HIF1A ARNT

7.54e-06296212393189
Pubmed

Dimerization, DNA binding, and transactivation properties of hypoxia-inducible factor 1.

HIF1A ARNT

7.54e-0629628663540
Pubmed

Activation of HIF-1α does not increase intestinal tumorigenesis.

HIF1A APC

7.54e-06296224875099
Pubmed

Pharmacological induction of hypoxia-inducible transcription factor ARNT attenuates chronic kidney failure.

ARNT YY1

7.54e-06296229664738
Pubmed

Developmental stage-specific expression of the alpha and beta subunits of the HIF-1 protein in the mouse and human fetus.

HIF1A ARNT

7.54e-06296211914036
Pubmed

Targeting the PAS-A domain of HIF-1alpha for development of small molecule inhibitors of HIF-1.

HIF1A ARNT

7.54e-06296216861921
Pubmed

Bacterially produced human HIF-1alpha is competent for heterodimerization and specific DNA-binding.

HIF1A ARNT

7.54e-06296215850782
Pubmed

Hypoxia-inducible factor-1β (HIF-1β) is upregulated in a HIF-1α-dependent manner in 518A2 human melanoma cells under hypoxic conditions.

HIF1A ARNT

7.54e-06296223541582
Pubmed

DDK Promotes Tumor Chemoresistance and Survival via Multiple Pathways.

DBF4 CDC7

7.54e-06296228448802
Pubmed

Adenomatous polyposis coli and hypoxia-inducible factor-1{alpha} have an antagonistic connection.

HIF1A APC

7.54e-06296220844082
Pubmed

Regulation of hypoxia-inducible factor 1 by glucose availability under hypoxic conditions.

HIF1A ARNT

7.54e-06296218762723
Pubmed

Disruption of hypoxia-inducible factor 1 in adipocytes improves insulin sensitivity and decreases adiposity in high-fat diet-fed mice.

HIF1A ARNT

7.54e-06296221873554
Pubmed

Molecular mechanism of activation of human Cdc7 kinase: bipartite interaction with Dbf4/activator of S phase kinase (ASK) activation subunit stimulates ATP binding and substrate recognition.

DBF4 CDC7

7.54e-06296221536671
Pubmed

A novel growth- and cell cycle-regulated protein, ASK, activates human Cdc7-related kinase and is essential for G1/S transition in mammalian cells.

DBF4 CDC7

7.54e-06296210373557
Pubmed

The modifier of Min 2 (Mom2) locus: embryonic lethality of a mutation in the Atp5a1 gene suggests a novel mechanism of polyp suppression.

APC ATP5F1A

7.54e-06296217387143
Pubmed

The role of the aryl hydrocarbon receptor nuclear translocator (ARNT) in hypoxic induction of gene expression. Studies in ARNT-deficient cells.

HIF1A ARNT

7.54e-0629628662957
Pubmed

A dominant-negative isoform lacking exons 11 and 12 of the human hypoxia-inducible factor-1alpha gene.

HIF1A ARNT

7.54e-06296211829741
Pubmed

Atm is a negative regulator of intestinal neoplasia.

APC ATM

7.54e-06296217700532
Pubmed

Role of HIF-1α in Alcohol-Mediated Multiple Organ Dysfunction.

HIF1A ARNT

7.54e-06296230544759
Pubmed

Optical analysis of the HIF-1 complex in living cells by FRET and FRAP.

HIF1A ARNT

7.54e-06296217197389
Pubmed

Piwi-like 1 and 4 gene transcript levels are associated with clinicopathological parameters in renal cell carcinomas.

PIWIL1 PIWIL4

7.54e-06296224509249
Pubmed

Increased expression of sFlt-1 in in vivo and in vitro models of human placental hypoxia is mediated by HIF-1.

FLT1 HIF1A

7.54e-06296216627691
Pubmed

DDK Has a Primary Role in Processing Stalled Replication Forks to Initiate Downstream Checkpoint Signaling.

DBF4 CDC7

7.54e-06296230157471
Pubmed

Cdc7-Dbf4 kinase overexpression in multiple cancers and tumor cell lines is correlated with p53 inactivation.

DBF4 CDC7

7.54e-06296218714392
Pubmed

PGC-1β promotes enterocyte lifespan and tumorigenesis in the intestine.

PPARGC1B APC

7.54e-06296225288742
Pubmed

Increased accumulation of hypoxia-inducible factor-1α with reduced transcriptional activity mediates the antitumor effect of triptolide.

HIF1A ARNT

7.54e-06296220932347
Pubmed

Chr21 protein-protein interactions: enrichment in proteins involved in intellectual disability, autism, and late-onset Alzheimer's disease.

IPO5 JAK1 DST OTOF KLHL7 CADPS VPS35L ASH1L APC CHMP3 ATM BTRC ATP5F1A DOP1B

1.17e-051285961435914814
Pubmed

Ggnbp2 Is Essential for Pregnancy Success via Regulation of Mouse Trophoblast Stem Cell Proliferation and Differentiation.

JAK1 FLT1 HIF1A ARNT

1.23e-055196426764350
Pubmed

Transcriptional regulation of endochondral ossification by HIF-2alpha during skeletal growth and osteoarthritis development.

HIF1A ARNT ARNT2

2.25e-052096320495570
Pubmed

Dietary phytochemicals regulate whole-body CYP1A1 expression through an arylhydrocarbon receptor nuclear translocator-dependent system in gut.

HIF1A ARNT

2.26e-05396217607366
Pubmed

HIF-2α, but not HIF-1α, mediates hypoxia-induced up-regulation of Flt-1 gene expression in placental trophoblasts.

FLT1 HIF1A

2.26e-05396230478339
Pubmed

Relationship between hypoxia and downstream pathogenic pathways in preeclampsia.

FLT1 HIF1A

2.26e-05396228067578
Pubmed

The role of Dbf4/Drf1-dependent kinase Cdc7 in DNA-damage checkpoint control.

DBF4 CDC7

2.26e-05396219111665
Pubmed

Regulation of hypoxia-inducible genes by ETS1 transcription factor.

HIF1A ARNT

2.26e-05396218381358
Pubmed

Role of the glucocorticoid receptor for regulation of hypoxia-dependent gene expression.

HIF1A ARNT

2.26e-05396212810720
Pubmed

DDK dependent regulation of TOP2A at centromeres revealed by a chemical genetics approach.

DBF4 CDC7

2.26e-05396227407105
Pubmed

Hypoxia-inducible factor directs POMC gene to mediate hypothalamic glucose sensing and energy balance regulation.

HIF1A ARNT

2.26e-05396221814490
Pubmed

Hepatic Aryl hydrocarbon Receptor Nuclear Translocator (ARNT) regulates metabolism in mice.

HIF1A ARNT

2.26e-05396229190746
Pubmed

Identification of the modifier of Min 2 (Mom2) locus, a new mutation that influences Apc-induced intestinal neoplasia.

APC ATP5F1A

2.26e-05396211779834
Pubmed

Transcription factor YY1 contributes to tumor growth by stabilizing hypoxia factor HIF-1α in a p53-independent manner.

HIF1A YY1

2.26e-05396223328582
Pubmed

Cdc7-Dbf4-mediated phosphorylation of HSP90-S164 stabilizes HSP90-HCLK2-MRN complex to enhance ATR/ATM signaling that overcomes replication stress in cancer.

DBF4 CDC7

2.26e-05396229209046
Pubmed

Tie2-dependent knockout of HIF-1 impairs burn wound vascularization and homing of bone marrow-derived angiogenic cells.

HIF1A ARNT

2.26e-05396222028336
Pubmed

DBF4, not DRF1, is the crucial regulator of CDC7 kinase at replication forks.

DBF4 CDC7

2.26e-05396238865090
Pubmed

Hypoxia-inducible factors in the first trimester human lung.

FLT1 HIF1A

2.26e-05396217189520
Pubmed

VEGF expression is regulated by HIF-1α and ARNT in 3D KYSE-70, esophageal cancer cell spheroids.

HIF1A ARNT

2.26e-05396227542820
Pubmed

cDNA cloning and tissue-specific expression of a novel basic helix-loop-helix/PAS factor (Arnt2) with close sequence similarity to the aryl hydrocarbon receptor nuclear translocator (Arnt).

ARNT ARNT2

2.26e-0539628657146
Pubmed

Selected Genetic Polymorphisms Associated with Hypoxia and Multidrug Resistance in Monoclonal Gammopathies Patients.

HIF1A ARNT

2.26e-05396230441975
Pubmed

Hypoxia-inducible factor (HIF)/vascular endothelial growth factor (VEGF) signaling in the retina.

HIF1A ARNT

2.26e-05396224664708
Pubmed

MicroRNA-101 negatively regulates Ezh2 and its expression is modulated by androgen receptor and HIF-1alpha/HIF-1beta.

HIF1A ARNT

2.26e-05396220478051
Pubmed

Nutrient-induced FNIP degradation by SCFβ-TRCP regulates FLCN complex localization and promotes renal cancer progression.

FNIP2 BTRC

2.26e-05396228039480
Pubmed

Analysis of Ah receptor-ARNT and Ah receptor-ARNT2 complexes in vitro and in cell culture.

ARNT ARNT2

2.26e-05396218096572
Pubmed

HIF1 activity in granulosa cells is required for FSH-regulated Vegfa expression and follicle survival in mice.

HIF1A ARNT

2.26e-05396224855100
Pubmed

Non-canonical HIF-1 stabilization contributes to intestinal tumorigenesis.

HIF1A APC

2.26e-05396231043706
Pubmed

Transcriptional co-activator LEDGF interacts with Cdc7-activator of S-phase kinase (ASK) and stimulates its enzymatic activity.

DBF4 CDC7

2.26e-05396219864417
Pubmed

Roles of arrest-defective protein 1(225) and hypoxia-inducible factor 1alpha in tumor growth and metastasis.

HIF1A APC

2.26e-05396220194889
Pubmed

Structural basis for PAS domain heterodimerization in the basic helix--loop--helix-PAS transcription factor hypoxia-inducible factor.

HIF1A ARNT

2.26e-05396214668441
Pubmed

Radiosensitizing effects of miR-18a-5p on lung cancer stem-like cells via downregulating both ATM and HIF-1α.

HIF1A ATM

2.26e-05396229860718
Pubmed

Targeting Stat3 blocks both HIF-1 and VEGF expression induced by multiple oncogenic growth signaling pathways.

HIF1A ARNT

2.26e-05396216007214
Pubmed

Dbf4 is direct downstream target of ataxia telangiectasia mutated (ATM) and ataxia telangiectasia and Rad3-related (ATR) protein to regulate intra-S-phase checkpoint.

DBF4 ATM

2.26e-05396222123827
InteractionKPNA5 interactions

IPO5 HIF1A ARNT KLHL7 ZRANB2 ATM

3.73e-0689946int:KPNA5
Cytoband3q11.2

OR5K2 OR5K1 GABRR3

2.22e-05269633q11.2
Cytoband5q32

FBXO38 PPARGC1B SPINK9

2.03e-04549635q32
CytobandEnsembl 112 genes in cytogenetic band chr3q11

OR5K2 OR5K1 GABRR3

2.03e-0454963chr3q11
CytobandEnsembl 112 genes in cytogenetic band chr5q32

FBXO38 PPARGC1B SPINK9

6.48e-0480963chr5q32
Cytoband15q22

FEM1B HERC1

1.69e-032996215q22
GeneFamilyArgonaute/PIWI family

PIWIL1 PIWIL4 PIWIL3

2.69e-068673408
CoexpressionDACOSTA_UV_RESPONSE_VIA_ERCC3_DN

ZMYND11 HIF1A PPP2R5C DST DBF4 ARNT2 APC LHFPL2 UTP20 ZZEF1 YY1 BTRC PHF21A DOP1B

2.48e-068569514M4500
ToppCell10x5'-lymph-node_spleen-Lymphocytic_T_CD4-T_CD4/CD8|lymph-node_spleen / Manually curated celltypes from each tissue

ZNF10 PPP2R5C ASH1L AAK1 RNF213 ATM HERC1 CEMIP2

9.14e-0919296847646d7e4990be85072987f92bf18d52f8da752e
ToppCell10x5'-bone_marrow-Lymphocytic_T_CD4-T_CD4/CD8|bone_marrow / Manually curated celltypes from each tissue

ZNF10 PPP2R5C AAK1 RNF213 ATM HERC1 CEMIP2

4.84e-081569671545169694f686d28648a68b552c2ae606599d66
ToppCellmild-low-quality_cells|World / Cohort 1 (10x PBMC) with disease condition, cell group and cell class

PPP2R5C ASH1L ZRANB2 AAK1 RNF213 ATM HERC1

2.55e-07199967f0b0097df0026496470a80d8cc9375ffd8389b00
ToppCellFetal_brain-fetalBrain_Zhong_nature-GW23-Neuronal-GABAergic_neurons|GW23 / Sample Type, Dataset, Time_group, and Cell type.

SLC32A1 DST CADPS ARNT2 WLS CDK14 CEMIP2

2.63e-07200967c6bbd33bca86ac7a76a7ba704b3e141237d04549
ToppCell3'_v3-GI_small-bowel-Lymphocytic_T_CD4-T_CD4/CD8|GI_small-bowel / Manually curated celltypes from each tissue

PPP2R5C ASH1L ZRANB2 AAK1 RNF213 CEMIP2

7.99e-0714796694998bc40f5c08295cfe3bdcbe43f13b1e564b3d
ToppCell3'_v3-lymph-node_spleen-Lymphocytic_T_CD4-T_CD4/CD8|lymph-node_spleen / Manually curated celltypes from each tissue

PPP2R5C AAK1 RNF213 ATM HERC1 CEMIP2

1.93e-061719662e9a20f8980b78325c52065a9c14ab3656267c05
ToppCell10x5'-Liver-Lymphocytic_T_CD4-T_CD4/CD8|Liver / Manually curated celltypes from each tissue

ZNF10 ASH1L AAK1 RNF213 ATM HERC1

2.68e-06181966f2315414e714ac86211546a935660c4be6e85f1b
ToppCellNeuron-Postmitotic-Inhibitory_Neuron-MGE2|World / Primary Cells by Cluster

SLC32A1 ARNT2 AAK1 APC WLS CRHBP

3.99e-06194966b42fd64b0fb95434a9e4e6586f31d26114a4074b
ToppCellNeuron-Postmitotic-Inhibitory_Neuron-MGE2-10|World / Primary Cells by Cluster

SLC32A1 ARNT2 AAK1 APC WLS CRHBP

3.99e-0619496681e7bc6516ab8d02ccd1c76a56a3533b788c27c8
ToppCellT/NK_cells-CD8+_Naive_T_cell|World / Lineage and Cell class

JAK1 PPP2R5C AAK1 RNF213 ATM CEMIP2

4.11e-0619596643f11068beea076e9caeb1572215c3f65c9308e1
ToppCellsevere-low-quality_cells|World / Cohort 1 (10x PBMC) with disease condition, cell group and cell class

PPP2R5C ZRANB2 AAK1 RNF213 ATM HERC1

4.36e-0619796657ebd552f10d6278623b52a3d484d4b91ae1d028
ToppCellSevere_COVID-19|World / Disease group,lineage and cell class (2021.01.30)

FNIP2 HIF1A OTOF LHFPL2 RNF213 GCH1

4.49e-0619896609fd456077bb3a657ad3b10c6cfe799b7266456a
ToppCellBAL-Severe|BAL / Location, Disease Group, Cell group, Cell class and sub_cluster (2021.03.01)

FNIP2 HIF1A OTOF LHFPL2 RNF213 GCH1

4.49e-06198966454aee3f4fe6d0beeccc55200b4495f4f9b44feb
ToppCellBAL-Severe|BAL / Location, Disease Group, Cell group, Cell class (2021.03.09)

FNIP2 HIF1A OTOF LHFPL2 RNF213 GCH1

4.49e-06198966687f69c16343227854c882b4a0f3930ce534a3d2
ToppCellprimary_visual_cortex-Neuronal-GABAergic_neuron-Sst-Sst_Tac1_Htr1d|primary_visual_cortex / Per Region, Lineage, Cell class, Cell type, Cell subtype

SLC32A1 TMEM44 LUZP2 RXFP3 CRHBP

2.16e-0515596579264ff283e36a059040a5aa9fe7337be694cb52
ToppCellfrontal_cortex-Neuronal-GABAergic_neuron-Sst|frontal_cortex / Per Region, Lineage, Cell class, Cell type, Cell subtype

SLC32A1 TMEM44 RXFP3 SMC2 CRHBP

2.59e-05161965dccb61d5e17a8f1c6d1fc146ee389f567659a0f0
ToppCellnucseq-Immune-Immune_Myeloid-Myeloid_Dendritic-pDC|nucseq / Celltype signatures by Technology, Lineage, Lineage_subclass, Celltype_group, Cell_type2

ZNF10 SLC32A1 PI4KA PABPN1L SLC1A4

3.86e-0517596537c2d4e0b6e9a3171931797ce9a54f3347288e57
ToppCelldroplet-Lung-nan-18m-Myeloid-Proliferating_Classical_Monocyte|Lung / Lung_Trachea - method, tissue, subtissue, age, lineage, cell ontology and free annotation

MTHFD1L DBF4 SERPINC1 CCNJ SMC2

4.65e-0518296511494a66d986297b837332ee9d382b71b9f22591
ToppCellNS-moderate-d_07-13-Myeloid-Monocyte-derived_Macrophage|d_07-13 / Location, Severity, dps_group, Lineage and Cell class of Upper airway (combined)

FLT1 IDI2-AS1 LHFPL2 RNF213 GCH1

4.65e-05182965e03e995e5fd14fc6a7559b83c0ca4e7ccc8e3d0f
ToppCellnormal-na-Lymphocytic_T-CytoT_GZMK+-male|normal / PBMC cell types (v2) per disease, treatment status, and sex

JAK1 PPP2R5C RNF213 ATM CEMIP2

4.77e-0518396579defd22b3194dad16db55b9bdd220c09c1e6b90
ToppCellprimary_auditory_cortex_(A1C)-Neuronal-Inh_GABAergic-i_Gaba_3-GABA_PVALB_1-Inh_L1-3_PVALB_WFDC2|primary_auditory_cortex_(A1C) / Sample groups (6 Anatomical region groups), with 5 level hierarchy of cell types

SLC32A1 LUZP2 RXFP3 WLS CRHBP

4.90e-05184965c4c1a3d279ca733b865ce46570d7642dc137f9a4
ToppCellLPS_only|World / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2

HIF1A MTHFD1L RNF213 GCH1 CEMIP2

5.03e-05185965a72ccb147ca505880e2da8f6a70b9d570464a691
ToppCell368C-Lymphocytic-CD4_T-cell-Treg_cell_3|Lymphocytic / Donor, Lineage, Cell class and subclass (all cells)

CNOT11 R3HCC1L RNF213 ZZEF1 PHF21A

5.29e-051879654527d6426f2c4397e47f12439a13a8c14fd2aab2
ToppCell10x5'-GI_small-bowel-Lymphocytic_T_CD4-T_CD4/CD8|GI_small-bowel / Manually curated celltypes from each tissue

ZNF10 ASH1L RNF213 HERC1 CEMIP2

5.43e-05188965ab9b725d6e0cdab8e9ddda6dee09e14730e9a578
ToppCell3'-Broncho-tracheal-Immune_Lymphocytic-Lymphocytic_T/NK-natural_killer_cell-NK_cells-NK_cells_L.1.3.0.0|3' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5

JAK1 PPP2R5C RNF213 ATM CEMIP2

5.85e-05191965753deb090b7b78b4ef31604dbe5dbfc4dcf5184a
ToppCell3'-Broncho-tracheal-Immune_Lymphocytic-Lymphocytic_T/NK-natural_killer_cell|3' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5

JAK1 PPP2R5C RNF213 ATM CEMIP2

5.85e-05191965355f5bcb220d917163833dead0050fc756c7b260
ToppCell3'-Broncho-tracheal-Immune_Lymphocytic-Lymphocytic_T/NK-natural_killer_cell-NK_cells|3' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5

JAK1 PPP2R5C RNF213 ATM CEMIP2

5.85e-05191965337d7d7b89fe370e1fe005b9daad76c5dc3b8444
ToppCellP03-Endothelial-large_vessel_endothelial_cell|P03 / developmental_time, Lineage, Cell group, Cell type, Cell type_cellcyc-phase

FLT1 DST TMEM44 GCH1 CEMIP2

5.85e-05191965b680e0c35f1004be36f9f0680ae3c62952e2b607
ToppCellcontrol-Lymphoid-CTL|Lymphoid / Severity, Lineage and Cell class of Nasopharyngeal (NS) Samples from Patients and Controls

ZRANB2 AAK1 RNF213 MYSM1 CDC7

6.14e-0519396589d407a88b5956559a589425b89b3eb8dc78e1dd
ToppCellNeuron-Postmitotic-Inhibitory_Neuron-SST-MGE1-4|World / Primary Cells by Cluster

SLC32A1 DST AAK1 WLS CEMIP2

6.14e-051939652eb6e4cff4fe3ce564c1581f6f7df4834895aaa9
ToppCellMid-temporal_gyrus_(MTG)-Neuronal-Inh_GABAergic-i_Gaba_3-GABA_SST|Mid-temporal_gyrus_(MTG) / Sample groups (6 Anatomical region groups), with 5 level hierarchy of cell types

SLC32A1 OTOF AAK1 WLS CRHBP

6.14e-051939652189da4b727e25e62669d7b9257f06493be21a27
ToppCellsevere-low-quality_cells|severe / Cohort 1 (10x PBMC) with disease condition, cell group and cell class

ZRANB2 AAK1 RNF213 ATM HERC1

6.14e-051939659337bc93e3904c7fc7c93c328518bcd6453b1e8c
ToppCell3'_v3-bone_marrow-Lymphocytic_NK-NK_CD16|bone_marrow / Manually curated celltypes from each tissue

JAK1 PPP2R5C RNF213 ATM CEMIP2

6.30e-051949657773501e076d470158dbc1d7f10c67152b326eb7
ToppCellcontrol-Lymphoid-Treg|Lymphoid / Severity, Lineage and Cell class of Nasopharyngeal (NS) Samples from Patients and Controls

ZRANB2 AAK1 RNF213 CEMIP2 CCDC152

6.45e-0519596566959ae839eb60a573da06bdd227090ebb5bb9ed
ToppCellbackground-Endothelial_cells|background / Sample and Cell Type and Tumor Cluster (all cells)

FLT1 TMEM44 LHFPL2 HERC1 CRHBP

6.61e-05196965e6fb0bfab1779ec64a8c35d01519eaafbf62e977
ToppCellmoderate-Lymphoid-Treg|Lymphoid / Severity, Lineage and Cell class of Nasopharyngeal (NS) Samples from Patients and Controls

PPP2R5C ZRANB2 AAK1 RNF213 CEMIP2

6.61e-051969659152f4a8a27ff4ee28f231c5ad00eb2edd9ea6da
ToppCellSevere|World / Condition, Lineage, Cell class and cell subclass

FNIP2 HIF1A LHFPL2 RNF213 GCH1

7.10e-05199965a8b87f4f504a3b0ad6013277f0c9f543db3ef1fb
ToppCellLPS_only-Endothelial-Endothelial-Activated_Gen_Cap|LPS_only / Treatment groups by lineage, cell group, cell type

JAK1 FLT1 HIF1A RNF213 BCR

7.27e-052009656f531a418ff25b59a543800cf4bce7b72404ce08
ToppCellLPS_IL1RA-Endothelial-Endothelial-Activated_Gen_Cap|LPS_IL1RA / Treatment groups by lineage, cell group, cell type

JAK1 FLT1 HIF1A RNF213 CEMIP2

7.27e-052009652d07237022b409c4fac6fcf99b68c8affb3007cd
ToppCellLPS_only-Endothelial-Endothelial-Activated_Alv_Cap|LPS_only / Treatment groups by lineage, cell group, cell type

FLT1 HIF1A RNF213 BCR CEMIP2

7.27e-05200965edb64556b3fefe3144f73b6efe23b9ffd34091d2
ToppCellmild-gd_T|World / Cohort 1 (10x PBMC) with disease condition, cell group and cell class

JAK1 PPP2R5C AAK1 RNF213 ATM

7.27e-05200965109f673a4967ffa52270a0b4f818b3461288db44
ToppCellNeuronal-Inhibitory-iB|Neuronal / cells hierarchy compared to all cells using T-Statistic

SLC32A1 CADPS AAK1 WLS CRHBP

7.27e-0520096545ddc5ef2caa87ada88327b63ba9b150a6bb3aa5
ToppCell3'_v3-bone_marrow-Lymphocytic_T_CD4-T_CD4/CD8|bone_marrow / Manually curated celltypes from each tissue

ASH1L RNF213 ATM CEMIP2

1.37e-0412196419333a660800b583fa27b495c1f7828e6636a257
Diseaseendometrial cancer (is_implicated_in)

JAK1 SHBG APC ATM

5.26e-0636944DOID:1380 (is_implicated_in)
DiseaseTransitional cell carcinoma of bladder

FLT1 BCR

6.00e-054942C0279680
Diseasesevere acute respiratory syndrome, COVID-19

AXDND1 CADPS MTHFD1L ARNT2 SYT14 NMBR OR5K1 TG

9.30e-05447948EFO_0000694, MONDO_0100096
Diseasemental or behavioural disorder, substance abuse

LUZP2 CDC7

1.49e-046942EFO_0000677, MONDO_0002491
Diseasedisease of cellular proliferation (implicated_via_orthology)

JAK1 ATM

2.09e-047942DOID:14566 (implicated_via_orthology)
Diseaseestradiol measurement

JAK1 PPARGC1B PIWIL1 SHBG

4.31e-04110944EFO_0004697
DiseaseMalignant neoplasm of breast

GPR180 PPARGC1B SLC39A12 FLT1 ADHFE1 HIF1A OTOF ZNF432 UTP20 ATM NMBR

6.18e-0410749411C0006142
DiseaseOligospermia

PIWIL4 PIWIL3

6.49e-0412942C0028960
DiseaseMyeloproliferative disease

ATG2B BCR

6.49e-0412942C0027022
Diseasemacular retinal edema (is_marker_for)

FLT1 HIF1A

6.49e-0412942DOID:4449 (is_marker_for)
Diseasedrug use measurement, depressive symptom measurement, SSRI use measurement

LUZP2 CSMD2

7.65e-0413942EFO_0007006, EFO_0007010, EFO_0007011
DiseasePrecursor Cell Lymphoblastic Leukemia Lymphoma

JAK1 ARNT BCR

9.86e-0461943C1961102
Diseasepreeclampsia, parental genotype effect measurement

FLT1 WLS

1.17e-0316942EFO_0000668, EFO_0005939
DiseaseNeoplasms, Experimental

HIF1A ARNT BCR

1.24e-0366943C0027659
DiseaseBenign neoplasm of stomach

APC ATM

1.32e-0317942C0153943
DiseaseNeoplasm of uncertain or unknown behavior of stomach

APC ATM

1.32e-0317942C0496905
DiseaseLipidemias

PPARGC1B APC

1.32e-0317942C1706412
DiseaseCarcinoma in situ of stomach

APC ATM

1.32e-0317942C0154060
DiseaseHyperlipidemia

PPARGC1B APC

1.32e-0317942C0020473
Diseaseage at onset, Parkinson disease

AAK1 LHFPL2

1.49e-0318942EFO_0004847, MONDO_0005180
Diseasestomach cancer (is_implicated_in)

JAK1 APC ATP4B

1.59e-0372943DOID:10534 (is_implicated_in)
Diseaseleukemia (implicated_via_orthology)

ASH1L ATM

1.66e-0319942DOID:1240 (implicated_via_orthology)
DiseaseFEV/FEC ratio

PPARGC1B FLT1 DST KLHL7 CADPS LHFPL2 HERC1 NMBR YY1 CEMIP2 TG

1.82e-0312289411EFO_0004713
DiseaseStomach Carcinoma

APC ATM

2.03e-0321942C0699791
DiseaseImmunologic Deficiency Syndromes

ATM MYSM1

2.43e-0323942C0021051
DiseaseIntellectual Disability

ZMYND11 ASH1L APC YY1 SLC1A4 PHF21A

3.10e-03447946C3714756
DiseaseHereditary Nonpolyposis Colorectal Neoplasms

APC ATM

3.10e-0326942C0009405
DiseaseMicronuclei, Chromosome-Defective

HIF1A PPP2R5C

3.10e-0326942C1449861
DiseaseMicronuclei, Genotoxicant-Induced

HIF1A PPP2R5C

3.10e-0326942C1449862
Diseasenevus count, cutaneous melanoma

PPARGC1B ARNT ATM

3.11e-0391943EFO_0000389, EFO_0004632

Protein segments in the cluster

PeptideGeneStartEntry
SMGKALEMSCAIQNQ

BARGIN

101

Q6ZT62
TGTVKKEGQQSSMRM

ARNT

241

P27540
KMKVCAMEQAEGTPR

PABPN1L

91

A6NDY0
RQGSMIQTLAMKKAS

ASH1L

1141

Q9NR48
IRTQGQKKVASMMES

CFAP43

1476

Q8NDM7
AGSLQKSTEVMKAMQ

CHMP3

101

Q9Y3E7
QGSKRITCMKVSDMF

CSMD2

376

Q7Z408
SNGMKCALKRMFVNN

AAK1

66

Q2M2I8
SSLGSQAMQMERKKS

BCR

201

P11274
FNNGMMVTCSKDRSI

BTRC

391

Q9Y297
QALKKQVVMQAMGSC

CCDC96

331

Q2M329
SLGCMTNMNLVLTKQ

CCNJ

111

Q5T5M9
MLTCNKAGSRMVVDA

PPP2R5C

1

Q13362
EICVTKMSTRNCQGM

CDK14

41

O94921
KMSTRNCQGMDSVIK

CDK14

46

O94921
MTKLGACNDTLQQLM

SERPINC1

121

P01008
MAALQEKKTCGQRME

ATP4B

1

P51164
LQCLFQRKGSMTMSI

MTHFD1L

236

Q6UB35
LNEKMSNKCSMLSTA

DBF4

426

Q9UBU7
MTSSMQLAKECLSQK

ATG2B

121

Q96BY7
AQTRAMKQVAGTMKL

ATP5F1A

421

P25705
GTVKKEGQQSSMRMC

ARNT2

216

Q9HBZ2
KNVGDITNKACMMDT

R3HCC1L

366

Q7Z5L2
MSKKLCIQMTTGAFI

OR5K2

136

Q8NHB8
NAMAFCAKMRSSKKT

JAK1

11

P23458
MVDAKAQSTKLCSME

CADPS

1141

Q9ULU8
MQTSGALLRTCVKAM

NMBR

151

P28336
ATKENMTSQRGMLKS

GOSR1

186

O95249
QEMLNMSKKTVSCFV

HAUS2

31

Q9NVX0
TMFSIECAKQTKQMV

SPINK9

16

Q5DT21
ANKTCKMMLATEETS

DST

5231

Q03001
MKCTLTSRGRTMNIK

HIF1A

171

Q16665
MMQLVSVAKSSEGKN

DOP1B

1356

Q9Y3R5
SLLTAKQLEQMVCGM

HERC1

4716

Q15751
QICSTKGMMAGAEKL

DDX58

141

O95786
TQMKMSLKCLAARAV

FEM1B

591

Q9UK73
VMETGNTKNSALMAK

PLRG1

166

O43660
QMSVIGSRKKSVNMT

MEX3D

166

Q86XN8
SNSISKCMEMKNTIL

PHF21A

591

Q96BD5
QKDKSGMMQCVIAVA

PI4KA

926

P42356
MDCGNKARTVAATNM

KIF1C

196

O43896
TMCVQSIMKKSIFNV

LHFPL2

121

Q6ZUX7
MGVMNNMRKQKTLCD

KLHL7

31

Q8IXQ5
CSEKLSKAQLTMTMN

GPR180

91

Q86V85
IIQMETQSSMRKKVC

IPO5

96

O00410
MSKKLCIQMTTGAFI

OR5K1

136

Q8NHB7
MGPRKKSVKTCIMNN

FBXO38

1

Q6PIJ6
ILVSLTMKNCKAAMN

ATM

611

Q13315
NTRGTRVKCMANEVM

CEFIP

921

Q711Q0
NIKMTHQRCSSSMKQ

GABRR3

26

A8MPY1
AQMKVGCDNTVVRMV

CRHBP

271

P24387
KVMNSAVMRKTASSC

CDC7

331

O00311
LTMMSGTLEKNQLCQ

FNIP2

401

Q9P278
CKGMVTAMALSKSTN

AXDND1

766

Q5T1B0
CMAMVRKSSALGKEV

IDI2-AS1

26

Q9NZ38
AVSQITRMCLLKGNM

DDX50

616

Q9BQ39
MDQSSEGCMKKISSV

CCDC152

1

Q4G0S7
NNSMCTTMRDKVFGN

CEMIP2

636

Q9UHN6
SQMKAMKETVQLCLT

LUZP2

201

Q86TE4
MKSDCMQTTICQERK

DUS4L

1

O95620
QFKCSSSKARQLMMT

EVC

331

P57679
KALKSECQGQMERQM

CCDC158

436

Q5M9N0
TIVTKIAQQMNCKMG

PIWIL3

621

Q7Z3Z3
EMPIGSMTASNRKCK

SLC39A12

521

Q504Y0
RGAKTAKQCTMEMAT

OTOF

1856

Q9HC10
SMKKLMACVSQDNFS

PRM3

31

Q9NNZ6
MGAKNVCLMTDKNLS

ADHFE1

71

Q8IWW8
ATKIALQMNCKMGGE

PIWIL1

601

Q96J94
GKAMCKIVSMVTSMN

RXFP3

151

Q9NSD7
NDDSATCKKMASMTI

UTP20

2336

O75691
SQSTESNMSVPKKMC

SENP7

916

Q9BQF6
RKQSEMQMKAGVTCE

PSAPL1

281

Q6NUJ1
KLTLLNSMGQEMSKC

SYT14

456

Q8NB59
NSMGQEMSKCKTSIR

SYT14

461

Q8NB59
SRICATVKKTMNMIQ

SKA2

76

Q8WVK7
RGVQKMNSKTVTSTM

GCH1

216

P30793
CVLARTLNKQGMMMS

PIWIL4

576

Q7Z3Z4
IATKIAMQMTCKLGG

PIWIL4

591

Q7Z3Z4
KKAPMMQSQSRSCTE

PPARGC1B

201

Q86YN6
SMSRVVLSQGSKMKA

SHBG

311

P04278
SKRDSIEMSMKGCQT

SLC3A1

6

Q07837
SMKGCMRALVAQLKS

APC

521

P25054
MCVKNSTGVEIKRIM

CNOT11

316

Q9UKZ1
NINRVKICMETGKMV

RNF213

3086

Q63HN8
LTEMMERCKKLGNNA

VPS35L

411

Q7Z3J2
SMMKCIEENNGVDKR

SLC1A4

351

P43007
MSRQANRGTESKKMS

TRAPPC3

1

O43617
KGCTKMFRDNSAMRK

YY1

301

P25490
FLSCVMKSKMRQALG

TMEM44

311

Q2T9K0
QGMTKVTTDKMAQER

PLCB2

1056

Q00722
QMMACKNDISKAQTE

SMC2

401

O95347
CNRCGREKTTEAKMM

ZRANB2

31

O95218
NIRAGNKMIVMETCA

TRMT6

196

Q9UJA5
KQSCDIKMEGMARND

ZNF10

106

P21506
AVANMQGEMDRKCKQ

ZMYND11

516

Q15326
NECGKGFTMKSRMIE

ZNF432

376

O94892
CMALKSVRQLGSNMV

ZZEF1

1221

O43149
SSKCMMKEVLSTGQG

ZNF611

66

Q8N823
VSNKSQAKMSGMFAR

SLC32A1

16

Q9H598
MAGAIIENMSTKKLC

WLS

1

Q5T9L3
TQRMAIIEGKNKMAS

FLT1

506

P17948
DCEKQRARMQSLMGS

TG

661

P01266
MRKTLSKVTNCFMAE

MYSM1

781

Q5VVJ2