Cluster composition

Functions

Category	Name	IntersectionWithQuery	PValue	GenesInTerm	GenesInQuery	GenesInTermInQuery	ID
GeneOntologyMolecularFunction	RNA polymerase II transcription regulatory region sequence-specific DNA binding	ZNF134 ZBTB33 ZNF354A ZNF268 ZFP30 ZNF180 ZNF189 ZKSCAN8 OSR2 ZNF208 ZKSCAN7 ZNF619 ZNF227 ZSCAN25 ZNF354B SNAI3 ZNF529 IKZF4 ZNF284 ZNF404 ZNF7 ZNF34 ZNF17 ZNF19 ZNF182 ZNF33A ZNF35 ZFHX4 ZNF780A MTF1 ZNF728 GLI1 GLI3 ZNF587 ZNF846 ZNF92 ZNF558 OSR1 ZNF624 ZNF761 ZNF319 ZNF107 ZNF417 ZFP82 ZFP62 ZNF646	9.91e-19	1459	141	46	GO:0000977
GeneOntologyMolecularFunction	DNA-binding transcription factor activity, RNA polymerase II-specific	ZNF134 ZBTB33 ZNF354A ZNF268 ZFP30 ZNF180 ZNF189 ZKSCAN8 OSR2 ZNF208 ZKSCAN7 ZNF619 ZNF227 ZSCAN25 ZNF354B SNAI3 ZNF529 ZNF284 ZNF404 ZNF7 ZNF34 ZNF17 ZNF19 ZNF182 ZNF33A ZNF35 ZFHX4 ZNF780A MTF1 ZNF728 GLI1 GLI3 ZNF587 ZNF846 ZNF92 ZNF558 OSR1 ZNF624 ZNF761 ZNF319 ZNF107 ZNF417 ZFP82 ZFP62 ZNF646	1.77e-18	1412	141	45	GO:0000981
GeneOntologyMolecularFunction	RNA polymerase II cis-regulatory region sequence-specific DNA binding	ZNF134 ZBTB33 ZNF354A ZNF268 ZFP30 ZNF189 ZKSCAN8 ZNF208 ZKSCAN7 ZNF227 ZSCAN25 ZNF354B SNAI3 IKZF4 ZNF284 ZNF7 ZNF34 ZNF17 ZNF182 ZNF33A ZFHX4 ZNF780A MTF1 ZNF728 GLI1 GLI3 ZNF587 ZNF92 ZNF624 ZNF761 ZNF319 ZNF107 ZNF417 ZFP82 ZFP62 ZNF646	1.98e-13	1244	141	36	GO:0000978
GeneOntologyMolecularFunction	cis-regulatory region sequence-specific DNA binding	ZNF134 ZBTB33 ZNF354A ZNF268 ZFP30 ZNF189 ZKSCAN8 ZNF208 ZKSCAN7 ZNF227 ZSCAN25 ZNF354B SNAI3 IKZF4 ZNF284 ZNF7 ZNF34 ZNF17 ZNF182 ZNF33A ZFHX4 ZNF780A MTF1 ZNF728 GLI1 GLI3 ZNF587 ZNF92 ZNF624 ZNF761 ZNF319 ZNF107 ZNF417 ZFP82 ZFP62 ZNF646	3.74e-13	1271	141	36	GO:0000987
GeneOntologyMolecularFunction	DNA-binding transcription activator activity, RNA polymerase II-specific	ZNF268 OSR2 ZNF208 ZNF227 ZNF33A ZNF780A MTF1 GLI1 ZNF624 ZNF319 ZNF107 ZFP62	6.30e-04	560	141	12	GO:0001228
GeneOntologyMolecularFunction	DNA-binding transcription activator activity	ZNF268 OSR2 ZNF208 ZNF227 ZNF33A ZNF780A MTF1 GLI1 ZNF624 ZNF319 ZNF107 ZFP62	6.92e-04	566	141	12	GO:0001216
Domain	Znf_C2H2-like	ZNF134 ZNF609 ZBTB33 ZNF354A ZNF268 ZFP30 ZNF180 ZNF189 ZKSCAN8 OSR2 ZNF208 ZKSCAN7 ZMAT4 ZNF619 ZNF227 ZSCAN25 ZNF831 ZNF354B SNAI3 ZNF529 IKZF4 ZNF284 ZNF404 ZNF7 ZNF34 ZNF17 ZNF19 ZNF182 ZNF33A ZNF35 ZFHX4 ZNF780A MTF1 ZNF45 ZNF728 GLI1 GLI3 ZNF587 ZNF846 ZNF92 BRPF1 ZNF558 OSR1 ZNF624 ZNF761 ZNF319 ZNF107 ZNF417 ZFP82 ZFP62 ZNF646	3.98e-34	796	140	51	IPR015880
Domain	-	ZNF134 ZBTB33 ZNF354A ZNF268 ZFP30 ZNF180 ZNF189 ZKSCAN8 OSR2 ZNF208 ZKSCAN7 ZNF619 ZNF227 ZSCAN25 ZNF831 ZNF354B SNAI3 ZNF529 IKZF4 ZNF284 ZNF404 ZNF7 ZNF34 ZNF17 ZNF19 ZNF182 ZNF33A ZNF35 ZFHX4 ZNF780A MTF1 ZNF45 ZNF728 GLI1 GLI3 ZNF587 ZNF846 ZNF92 ZNF558 OSR1 ZNF624 ZNF761 ZNF319 ZNF107 ZNF417 ZFP82 ZFP62 ZNF646	6.08e-34	679	140	48	3.30.160.60
Domain	Znf_C2H2	ZNF134 ZNF609 ZBTB33 ZNF354A ZNF268 ZFP30 ZNF180 ZNF189 ZKSCAN8 OSR2 ZNF208 ZKSCAN7 ZMAT4 ZNF619 ZNF227 ZSCAN25 ZNF831 ZNF354B SNAI3 ZNF529 IKZF4 ZNF284 ZNF404 ZNF7 ZNF34 ZNF17 ZNF19 ZNF182 ZNF33A ZNF35 ZFHX4 ZNF780A MTF1 ZNF45 ZNF728 GLI1 GLI3 ZNF587 ZNF846 ZNF92 BRPF1 ZNF558 OSR1 ZNF624 ZNF761 ZNF319 ZNF107 ZNF417 ZFP82 ZFP62 ZNF646	6.89e-34	805	140	51	IPR007087
Domain	ZnF_C2H2	ZNF134 ZNF609 ZBTB33 ZNF354A ZNF268 ZFP30 ZNF180 ZNF189 ZKSCAN8 OSR2 ZNF208 ZKSCAN7 ZMAT4 ZNF619 ZNF227 ZSCAN25 ZNF831 ZNF354B SNAI3 ZNF529 IKZF4 ZNF284 ZNF404 ZNF7 ZNF34 ZNF17 ZNF19 ZNF182 ZNF33A ZNF35 ZFHX4 ZNF780A MTF1 ZNF45 ZNF728 GLI1 GLI3 ZNF587 ZNF846 ZNF92 BRPF1 ZNF558 OSR1 ZNF624 ZNF761 ZNF319 ZNF107 ZNF417 ZFP82 ZFP62 ZNF646	8.26e-34	808	140	51	SM00355
Domain	ZINC_FINGER_C2H2_2	ZNF134 ZNF609 ZBTB33 ZNF354A ZNF268 ZFP30 ZNF180 ZNF189 ZKSCAN8 OSR2 ZNF208 ZKSCAN7 ZNF619 ZNF227 ZSCAN25 ZNF831 ZNF354B SNAI3 ZNF529 IKZF4 ZNF284 ZNF404 ZNF7 ZNF34 ZNF17 ZNF19 ZNF182 ZNF33A ZNF35 ZFHX4 ZNF780A MTF1 ZNF45 ZNF728 GLI1 GLI3 ZNF587 ZNF846 ZNF92 BRPF1 ZNF558 OSR1 ZNF624 ZNF761 ZNF319 ZNF107 ZNF417 ZFP82 ZFP62 ZNF646	1.51e-33	775	140	50	PS50157
Domain	Znf_C2H2/integrase_DNA-bd	ZNF134 ZBTB33 ZNF354A ZNF268 ZFP30 ZNF180 ZNF189 ZKSCAN8 OSR2 ZNF208 ZKSCAN7 ZNF619 ZNF227 ZSCAN25 ZNF831 ZNF354B SNAI3 ZNF529 IKZF4 ZNF284 ZNF404 ZNF7 ZNF34 ZNF17 ZNF19 ZNF182 ZNF33A ZNF35 ZFHX4 ZNF780A MTF1 ZNF45 ZNF728 GLI1 GLI3 ZNF587 ZNF846 ZNF92 ZNF558 OSR1 ZNF624 ZNF761 ZNF319 ZNF107 ZNF417 ZFP82 ZFP62 ZNF646	1.67e-33	694	140	48	IPR013087
Domain	ZINC_FINGER_C2H2_1	ZNF134 ZNF609 ZBTB33 ZNF354A ZNF268 ZFP30 ZNF180 ZNF189 ZKSCAN8 OSR2 ZNF208 ZKSCAN7 ZNF619 ZNF227 ZSCAN25 ZNF831 ZNF354B SNAI3 ZNF529 IKZF4 ZNF284 ZNF404 ZNF7 ZNF34 ZNF17 ZNF19 ZNF182 ZNF33A ZNF35 ZFHX4 ZNF780A MTF1 ZNF45 ZNF728 GLI1 GLI3 ZNF587 ZNF846 ZNF92 BRPF1 ZNF558 OSR1 ZNF624 ZNF761 ZNF319 ZNF107 ZNF417 ZFP82 ZFP62 ZNF646	1.70e-33	777	140	50	PS00028
Domain	zf-C2H2	ZNF134 ZBTB33 ZNF354A ZNF268 ZFP30 ZNF180 ZNF189 ZKSCAN8 OSR2 ZNF208 ZKSCAN7 ZNF619 ZNF227 ZSCAN25 ZNF354B SNAI3 ZNF529 IKZF4 ZNF284 ZNF404 ZNF7 ZNF34 ZNF17 ZNF19 ZNF182 ZNF33A ZNF35 ZFHX4 ZNF780A MTF1 ZNF45 ZNF728 GLI1 ZNF587 ZNF846 ZNF92 ZNF558 OSR1 ZNF624 ZNF761 ZNF319 ZNF107 ZNF417 ZFP82 ZFP62 ZNF646	3.11e-31	693	140	46	PF00096
Domain	KRAB	ZNF354A ZNF268 ZFP30 ZNF180 ZNF189 ZKSCAN8 ZNF208 ZKSCAN7 ZNF227 ZSCAN25 ZNF354B ZNF529 ZNF284 ZNF404 ZNF7 ZNF34 ZNF17 ZNF19 ZNF182 ZNF33A ZNF780A ZNF45 ZNF728 ZNF587 ZNF846 ZNF92 ZNF558 ZNF624 ZNF761 ZNF417 ZFP82	6.75e-24	369	140	31	SM00349
Domain	KRAB	ZNF354A ZNF268 ZFP30 ZNF180 ZNF189 ZKSCAN8 ZNF208 ZKSCAN7 ZNF227 ZSCAN25 ZNF354B ZNF529 ZNF284 ZNF404 ZNF7 ZNF34 ZNF17 ZNF19 ZNF182 ZNF33A ZNF780A ZNF45 ZNF728 ZNF587 ZNF846 ZNF92 ZNF558 ZNF624 ZNF761 ZNF417 ZFP82	7.33e-24	370	140	31	IPR001909
Domain	KRAB	ZNF354A ZNF268 ZFP30 ZNF180 ZNF189 ZKSCAN8 ZNF208 ZKSCAN7 ZNF227 ZNF354B ZNF529 ZNF284 ZNF404 ZNF7 ZNF34 ZNF17 ZNF19 ZNF182 ZNF33A ZNF780A ZNF45 ZNF728 ZNF587 ZNF846 ZNF92 ZNF558 ZNF624 ZNF761 ZNF417 ZFP82	4.24e-23	358	140	30	PS50805
Domain	KRAB	ZNF354A ZNF268 ZFP30 ZNF180 ZNF189 ZKSCAN8 ZNF208 ZKSCAN7 ZNF227 ZNF354B ZNF529 ZNF284 ZNF404 ZNF7 ZNF34 ZNF17 ZNF19 ZNF182 ZNF33A ZNF780A ZNF45 ZNF728 ZNF587 ZNF846 ZNF92 ZNF558 ZNF624 ZNF761 ZNF417 ZFP82	4.24e-23	358	140	30	PF01352
Domain	zf-C2H2_6	ZNF354A ZFP30 ZKSCAN8 OSR2 ZNF208 ZNF619 ZNF227 ZNF354B ZNF284 ZNF404 ZNF17 ZNF182 ZNF780A ZNF728 ZNF587 ZNF846 ZNF92 ZNF558 OSR1 ZNF624 ZNF761 ZNF107 ZNF417 ZFP82 ZFP62 ZNF646	6.12e-20	314	140	26	PF13912
Pathway	REACTOME_RNA_POLYMERASE_II_TRANSCRIPTION	ZNF354A STUB1 ZNF268 ZFP30 ZNF180 ZNF189 ZKSCAN8 ZNF208 ZKSCAN7 ZNF619 ZNF227 ZSCAN25 ZNF354B ZNF529 ZNF34 ZNF17 ZNF19 CNOT6L ZNF33A ZNF45 GLI3 ZNF587 ZNF92 BRPF1 ZNF558 ZNF624 ZNF761 ZNF417	2.19e-07	1387	100	28	M734
Pathway	REACTOME_GENERIC_TRANSCRIPTION_PATHWAY	ZNF354A STUB1 ZNF268 ZFP30 ZNF180 ZNF189 ZKSCAN8 ZNF208 ZKSCAN7 ZSCAN25 ZNF354B ZNF284 CNOT6L ZNF780A ZNF45 BRPF1 ZNF558 ZNF624 ZNF107	1.58e-06	768	100	19	MM14851
Pathway	REACTOME_GLI_PROTEINS_BIND_PROMOTERS_OF_HH_RESPONSIVE_GENES_TO_PROMOTE_TRANSCRIPTION	PTCH1 GLI1 GLI3	1.19e-05	7	100	3	M27501
Pathway	REACTOME_GENE_EXPRESSION_TRANSCRIPTION	ZNF354A STUB1 ZNF268 ZFP30 ZNF180 ZNF189 ZKSCAN8 ZNF208 ZKSCAN7 ZSCAN25 ZNF354B ZNF284 CNOT6L ZNF780A ZNF45 BRPF1 ZNF558 ZNF624 ZNF107	8.92e-05	1022	100	19	MM15436
Pathway	KEGG_MEDICUS_REFERENCE_HEDGEHOG_SIGNALING_PATHWAY	PTCH1 GLI1 GLI3	1.19e-04	14	100	3	M47414
Pathway	BIOCARTA_SHH_PATHWAY	PTCH1 GLI1 GLI3	1.48e-04	15	100	3	MM1498
Pathway	WP_HEDGEHOG_SIGNALING_WP47	PTCH1 GLI1 GLI3	1.81e-04	16	100	3	M39675
Pathway	BIOCARTA_SHH_PATHWAY	PTCH1 GLI1 GLI3	1.81e-04	16	100	3	M11792
Pathway	WP_HEDGEHOG_SIGNALING_PATHWAY	PTCH1 GLI1 GLI3	4.84e-04	22	100	3	MM15924
Pubmed	Acetylation-Mimic Mutation of TRIM28-Lys304 to Gln Attenuates the Interaction with KRAB-Zinc-Finger Proteins and Affects Gene Expression in Leukemic K562 Cells.	ZNF354A ZKSCAN8 ZNF208 ZNF227 ZNF354B ZNF529 ZNF7 ZNF34 ZNF17 ZNF182 ZNF33A ZNF780A ZNF45 ZNF728 ZNF587 ZNF92 ZNF558 ZNF624 ZNF107 ZNF417 ZFP82	1.48e-24	181	143	21	37372979
Pubmed	Rapid and efficient cloning of cDNAs encoding Krüppel-like zinc finger proteins by degenerate PCR.	ZNF208 ZNF7 ZNF624 ZNF107 ZFP82 ZFP62	5.26e-08	49	143	6	9630514
Pubmed	Intraflagellar transport 88 (IFT88) is crucial for craniofacial development in mice and is a candidate gene for human cleft lip and palate.	OSR2 PTCH1 GLI1 GLI3	1.32e-07	12	143	4	28069795
Pubmed	Genome-wide CRISPR screens identify novel regulators of wild-type and mutant p53 stability.	MON2 STUB1 ATRX CLASP1 ZNF180 BCORL1 RNF40 RESF1 GSE1 BRCA2 ZNF92 SENP6 SECISBP2 GOLGB1	1.61e-07	588	143	14	38580884
Pubmed	Multiple genes encoding zinc finger domains are expressed in human T cells.	ZNF7 ZNF17 ZNF19 ZNF182 ZNF45	1.71e-07	31	143	5	2288909
Pubmed	Twenty-seven nonoverlapping zinc finger cDNAs from human T cells map to nine different chromosomes with apparent clustering.	ZNF34 ZNF17 ZNF182 ZNF33A	2.66e-07	14	143	4	2014798
Pubmed	Chr21 protein-protein interactions: enrichment in proteins involved in intellectual disability, autism, and late-onset Alzheimer's disease.	KDM3A PDE7A STUB1 ATRX ZNF189 RNF40 ZNF619 ZNF227 DCTN1 USP16 ZNF7 ZNF34 TTC7B CIAO3 ZNF92 ZNF558 SENP6 ZNF624 HERC2 DCLK1	3.38e-07	1285	143	20	35914814
Pubmed	Construction of long-transcript enriched cDNA libraries from submicrogram amounts of total RNAs by a universal PCR amplification method.	ZWILCH ATRX EPB41L4B CCDC77 PTCH1 ANKLE2 DCTN1 ORC4 ZNF182 CNOT6L RESF1 ZNF780A CLMN GLI1 DCLK1 ZFP82 GOLGB1 WDFY1	5.47e-07	1084	143	18	11544199
Pubmed	The STUbL RNF4 regulates protein group SUMOylation by targeting the SUMO conjugation machinery.	ZNF609 ZBTB33 CLASP1 ZNF189 ZKSCAN8 CPD ZNF227 NDUFA9 ADAM10 GSE1 GLI3 ZNF319 ZNF417 PLOD1 ZFP82 GOLGB1 ZFP62 TPBG ZNF646	5.49e-07	1203	143	19	29180619
Pubmed	Sonic hedgehog regulates the proliferation, differentiation, and migration of enteric neural crest cells in gut.	PTCH1 GDNF GLI1	6.77e-07	5	143	3	15337776
Pubmed	Evidence for the involvement of the Gli gene family in embryonic mouse lung development.	PTCH1 GLI1 GLI3	6.77e-07	5	143	3	9268579
Pubmed	Expression of sonic hedgehog, patched, and Gli1 in developing taste papillae of the mouse.	PTCH1 GLI1 GLI3	6.77e-07	5	143	3	10096602
Pubmed	GLI3 repressor controls nephron number via regulation of Wnt11 and Ret in ureteric tip cells.	PTCH1 GDNF GLI3 OSR1	8.02e-07	18	143	4	19809516
Pubmed	Differential expansion of zinc-finger transcription factor loci in homologous human and mouse gene clusters.	ZNF180 ZNF227 ZNF284 ZNF404	1.26e-06	20	143	4	12743021
Pubmed	Nerve-derived sonic hedgehog defines a niche for hair follicle stem cells capable of becoming epidermal stem cells.	PTCH1 GLI1 GLI3	1.35e-06	6	143	3	21549329
Pubmed	Molecular analysis of coordinated bladder and urogenital organ formation by Hedgehog signaling.	PTCH1 GLI1 GLI3	1.35e-06	6	143	3	17202190
Pubmed	Loss of Sprouty Produces a Ciliopathic Skeletal Phenotype in Mice Through Upregulation of Hedgehog Signaling.	PTCH1 GLI1 GLI3	1.35e-06	6	143	3	34423857
Pubmed	A genome-wide screen to identify transcription factors expressed in pelvic Ganglia of the lower urinary tract.	PLXNA3 ZBTB33 RBM4 ZKSCAN8 OSR2 SNAI3 IKZF4 ZNF35 ZNF780A MTF1 GLI1 GLI3 BRPF1 OSR1	1.49e-06	709	143	14	22988430
Pubmed	Loss of Tbx3 in murine neural crest reduces enteric glia and causes cleft palate, but does not influence heart development or bowel transit.	OSR2 PTCH1 GLI3 OSR1	1.55e-06	21	143	4	30292786
Pubmed	Expression patterns of key Sonic Hedgehog signaling pathway components in the developing and adult mouse midbrain and in the MN9D cell line.	PTCH1 GLI1 GLI3	2.35e-06	7	143	3	28799057
Pubmed	Expression of the mouse Gli and Ptc genes is adjacent to embryonic sources of hedgehog signals suggesting a conservation of pathways between flies and mice.	PTCH1 GLI1 GLI3	2.35e-06	7	143	3	9152005
Pubmed	A novel murine allele of Intraflagellar Transport Protein 172 causes a syndrome including VACTERL-like features with hydrocephalus.	PTCH1 GLI1 GLI3	2.35e-06	7	143	3	21653639
Pubmed	Analysis of the Sonic Hedgehog signaling pathway in normal and abnormal bladder development.	PTCH1 GLI1 GLI3	2.35e-06	7	143	3	23308271
Pubmed	Sonic hedgehog regulates discrete populations of astrocytes in the adult mouse forebrain.	PTCH1 GLI1 GLI3	2.35e-06	7	143	3	20943901
Pubmed	Hedgehog regulates Norrie disease protein to drive neural progenitor self-renewal.	PTCH1 GLI1 GLI3	2.35e-06	7	143	3	23201751
Pubmed	Differential activities of Sonic hedgehog mediated by Gli transcription factors define distinct neuronal subtypes in the dorsal thalamus.	PTCH1 GLI1 GLI3	2.35e-06	7	143	3	14568100
Pubmed	Essential function of Gli2 and Gli3 in the formation of lung, trachea and oesophagus.	PTCH1 GLI1 GLI3	2.35e-06	7	143	3	9731531
Pubmed	Gli3-mediated repression of Hedgehog targets is required for normal mammary development.	PTCH1 GLI1 GLI3	2.35e-06	7	143	3	16914490
Pubmed	Cilia gene mutations cause atrioventricular septal defects by multiple mechanisms.	PTCH1 GLI1 GLI3 DNAH5	3.24e-06	25	143	4	27340223
Pubmed	T-box3 is a ciliary protein and regulates stability of the Gli3 transcription factor to control digit number.	PTCH1 GLI1 GLI3 OSR1	3.24e-06	25	143	4	27046536
Pubmed	A primary cilia-dependent etiology for midline facial disorders.	PTCH1 GLI1 GLI3	3.75e-06	8	143	3	20106874
Pubmed	GLI transcriptional repression is inert prior to Hedgehog pathway activation.	PTCH1 GLI1 GLI3	3.75e-06	8	143	3	35145123
Pubmed	Gene regulatory logic for reading the Sonic Hedgehog signaling gradient in the vertebrate neural tube.	PTCH1 GLI1 GLI3	3.75e-06	8	143	3	22265416
Pubmed	The transcription factor Gli3 promotes B cell development in fetal liver through repression of Shh.	PTCH1 GLI1 GLI3	3.75e-06	8	143	3	28533268
Pubmed	Spatiotemporal expression of sonic hedgehog signalling molecules in the embryonic mesencephalic dopaminergic neurons.	PTCH1 GLI1 GLI3	3.75e-06	8	143	3	34767969
Pubmed	Sonic hedgehog activates mesenchymal Gli1 expression during prostate ductal bud formation.	PTCH1 GLI1 GLI3	3.75e-06	8	143	3	12221011
Pubmed	Defects in mouse mammary gland development caused by conditional haploinsufficiency of Patched-1.	PTCH1 GLI1 GLI3	3.75e-06	8	143	3	10529434
Pubmed	Gli1 is not required for Pdgfralpha expression during mouse embryonic development.	PTCH1 GLI1 GLI3	3.75e-06	8	143	3	15811134
Pubmed	A hypermorphic mouse Gli3 allele results in a polydactylous limb phenotype.	PTCH1 GLI1 GLI3	3.75e-06	8	143	3	17266131
Pubmed	Unique functions of Sonic hedgehog signaling during external genitalia development.	PTCH1 GLI1 GLI3	3.75e-06	8	143	3	11684660
Pubmed	Loss of Suppressor of Fused in Mid-Corticogenesis Leads to the Expansion of Intermediate Progenitors.	PTCH1 GLI1 GLI3	5.61e-06	9	143	3	28781964
Pubmed	Cholesterol modification restricts the spread of Shh gradient in the limb bud.	PTCH1 GLI1 GLI3	5.61e-06	9	143	3	16611729
Pubmed	Opposing gradients of Gli repressor and activators mediate Shh signaling along the dorsoventral axis of the inner ear.	PTCH1 GLI1 GLI3	5.61e-06	9	143	3	17395647
Pubmed	The Sonic Hedgehog-Gli pathway regulates dorsal brain growth and tumorigenesis.	PTCH1 GLI1 GLI3	5.61e-06	9	143	3	11748155
Pubmed	Distinct expression patterns of Hedgehog signaling components in mouse gustatory system during postnatal tongue development and adult homeostasis.	PTCH1 GLI1 GLI3	5.61e-06	9	143	3	38848388
Pubmed	Sonic Hedgehog mediator Gli2 regulates bladder mesenchymal patterning.	PTCH1 GLI1 GLI3	5.61e-06	9	143	3	18710724
Pubmed	The mouse polydactylous mutation, luxate (lx), causes anterior shift of the anteroposterior border in the developing hindlimb bud.	PTCH1 GLI1 GLI3	5.61e-06	9	143	3	12455637
Pubmed	Gli3 null mice display glandular overgrowth of the developing stomach.	PTCH1 GLI1 GLI3	5.61e-06	9	143	3	16247775
Pubmed	The pleiotropic mouse phenotype extra-toes spotting is caused by translation initiation factor Eif3c mutations and is associated with disrupted sonic hedgehog signaling.	PTCH1 GLI1 GLI3	5.61e-06	9	143	3	21292980
Pubmed	New Insights into Development of Female Reproductive Tract-Hedgehog-Signal Response in Wolffian Tissues Directly Contributes to Uterus Development.	PTCH1 GLI1 GLI3	5.61e-06	9	143	3	33530552
Pubmed	Craniofacial Ciliopathies Reveal Specific Requirements for GLI Proteins during Development of the Facial Midline.	PTCH1 GLI1 GLI3	5.61e-06	9	143	3	27802276
Pubmed	Neural-specific Sox2 input and differential Gli-binding affinity provide context and positional information in Shh-directed neural patterning.	PTCH1 GLI1 GLI3	5.61e-06	9	143	3	23249739
Pubmed	Hedgehog signaling regulates FOXA2 in esophageal embryogenesis and Barrett's metaplasia.	PTCH1 GLI1 GLI3	5.61e-06	9	143	3	25083987
Pubmed	Evidence for an expansion-based temporal Shh gradient in specifying vertebrate digit identities.	PTCH1 GLI1 GLI3	5.61e-06	9	143	3	15315763
Pubmed	The sonic hedgehog-patched-gli pathway in human development and disease.	PTCH1 GLI1 GLI3	5.61e-06	9	143	3	11001584
Pubmed	Dorsoventral patterning is established in the telencephalon of mutants lacking both Gli3 and Hedgehog signaling.	PTCH1 GLI1 GLI3	5.61e-06	9	143	3	12397105
Pubmed	The loss of Hh responsiveness by a non-ciliary Gli2 variant.	PTCH1 GLI1 GLI3	5.61e-06	9	143	3	25834022
Pubmed	Regulation of Calvarial Osteogenesis by Concomitant De-repression of GLI3 and Activation of IHH Targets.	PTCH1 GLI1 GLI3	5.61e-06	9	143	3	29311969
Pubmed	Mouse limbs expressing only the Gli3 repressor resemble those of Sonic hedgehog mutants.	PTCH1 GLI1 GLI3	5.61e-06	9	143	3	23644062
Pubmed	A Retinoic Acid-Hedgehog Cascade Coordinates Mesoderm-Inducing Signals and Endoderm Competence during Lung Specification.	PTCH1 GLI1 GLI3 OSR1	6.01e-06	29	143	4	27320915
Pubmed	The Shh signalling pathway in early tooth development.	PTCH1 GLI1 GLI3	8.00e-06	10	143	3	10512189
Pubmed	Increasing Sufu gene dosage reveals its unorthodox role in promoting polydactyly and medulloblastoma tumorigenesis.	PTCH1 GLI1 GLI3	8.00e-06	10	143	3	38358805
Pubmed	Polydactyly in the mouse mutant Doublefoot involves altered Gli3 processing and is caused by a large deletion in cis to Indian hedgehog.	PTCH1 GLI1 GLI3	8.00e-06	10	143	3	18272352
Pubmed	Patched1 patterns Fibroblast growth factor 10 and Forkhead box F1 expression during pulmonary branch formation.	PTCH1 GLI1 GLI3	8.00e-06	10	143	3	28939119
Pubmed	Gli3 acts as a repressor downstream of Ihh in regulating two distinct steps of chondrocyte differentiation.	PTCH1 GLI1 GLI3	8.00e-06	10	143	3	16284117
Pubmed	Differential requirement for Gli2 and Gli3 in ventral neural cell fate specification.	PTCH1 GLI1 GLI3	8.00e-06	10	143	3	12812795
Pubmed	Fusion of lung lobes and vessels in mouse embryos heterozygous for the forkhead box f1 targeted allele.	PTCH1 GLI1 GLI3	8.00e-06	10	143	3	11943666
Pubmed	Control of cell pattern in the neural tube by the zinc finger transcription factor and oncogene Gli-1.	PTCH1 GLI1 GLI3	8.00e-06	10	143	3	9247260
Pubmed	Synovial joint formation during mouse limb skeletogenesis: roles of Indian hedgehog signaling.	PTCH1 GLI1 GLI3	8.00e-06	10	143	3	18083924
Pubmed	Neogenin regulates Sonic Hedgehog pathway activity during digit patterning.	PTCH1 GLI1 GLI3	8.00e-06	10	143	3	22275192
Pubmed	Kinesin-2 controls development and patterning of the vertebrate skeleton by Hedgehog- and Gli3-dependent mechanisms.	PTCH1 GLI1 GLI3	8.00e-06	10	143	3	17698054
Pubmed	Midline signaling regulates kidney positioning but not nephrogenesis through Shh.	PTCH1 GDNF GLI1	8.00e-06	10	143	3	20152829
Pubmed	Function and regulation of Alx4 in limb development: complex genetic interactions with Gli3 and Shh.	PTCH1 GLI1 GLI3	8.00e-06	10	143	3	16039644
Pubmed	Sonic hedgehog is not a limb morphogen but acts as a trigger to specify all digits in mice.	PTCH1 GLI1 GLI3	8.00e-06	10	143	3	35977544
Pubmed	Tbx5 inhibits hedgehog signaling in determination of digit identity.	PTCH1 GLI1 GLI3	8.00e-06	10	143	3	31373354
Pubmed	The Shh-independent activator function of the full-length Gli3 protein and its role in vertebrate limb digit patterning.	PTCH1 GLI1 GLI3	8.00e-06	10	143	3	17400206
Pubmed	Suppressor of Fused Chaperones Gli Proteins To Generate Transcriptional Responses to Sonic Hedgehog Signaling.	PTCH1 GLI1 GLI3	8.00e-06	10	143	3	27849569
Pubmed	Proximity-dependent biotin identification (BioID) reveals a dynamic LSD1-CoREST interactome during embryonic stem cell differentiation.	ZNF609 ZBTB33 BCORL1 RNF40 DCTN1 RESF1 GSE1 ZFHX4 BRCA2 GOLGB1	9.76e-06	418	143	10	34709266
Pubmed	Primary cilia regulate Shh activity in the control of molar tooth number.	PTCH1 GLI1 GLI3	1.10e-05	11	143	3	19211681
Pubmed	Sufu- and Spop-mediated regulation of Gli2 is essential for the control of mammalian cochlear hair cell differentiation.	PTCH1 GLI1 GLI3	1.10e-05	11	143	3	36252002
Pubmed	The role of sonic hedgehog-Gli2 pathway in the masculinization of external genitalia.	PTCH1 GLI1 GLI3	1.10e-05	11	143	3	21586556
Pubmed	Fuz mutant mice reveal shared mechanisms between ciliopathies and FGF-related syndromes.	PTCH1 GLI1 GLI3	1.10e-05	11	143	3	23806618
Pubmed	Runx2 (Cbfa1) inhibits Shh signaling in the lower but not upper molars of mouse embryos and prevents the budding of putative successional teeth.	PTCH1 GLI1 GLI3	1.10e-05	11	143	3	15668330
Pubmed	The Shh signalling pathway in tooth development: defects in Gli2 and Gli3 mutants.	PTCH1 GLI1 GLI3	1.10e-05	11	143	3	9655803
Pubmed	Shh and Gli3 are dispensable for limb skeleton formation but regulate digit number and identity.	PTCH1 GLI1 GLI3	1.10e-05	11	143	3	12198547
Pubmed	Complementary Gli activity mediates early patterning of the mouse visual system.	PTCH1 GLI1 GLI3	1.10e-05	11	143	3	16342201
Pubmed	Role of Indian hedgehog signaling in palatal osteogenesis.	PTCH1 GLI1 GLI3	1.10e-05	11	143	3	21364421
Pubmed	Primary cilia are critical for tracheoesophageal septation.	PTCH1 GLI1 GLI3	1.10e-05	11	143	3	37776236
Pubmed	Replicated anterior zeugopod (raz): a polydactylous mouse mutant with lowered Shh signaling in the limb bud.	PTCH1 GLI1 GLI3	1.10e-05	11	143	3	14597572
Pubmed	PI3K class II α controls spatially restricted endosomal PtdIns3P and Rab11 activation to promote primary cilium function.	PTCH1 GLI1 GLI3	1.10e-05	11	143	3	24697898
Pubmed	The SIL gene is required for mouse embryonic axial development and left-right specification.	PTCH1 GLI1 GLI3	1.10e-05	11	143	3	10385121
Pubmed	CPLANE protein INTU regulates growth and patterning of the mouse lungs through cilia-dependent Hh signaling.	PTCH1 GLI1 GLI3	1.10e-05	11	143	3	39029571
Pubmed	RNF43 inhibits WNT5A-driven signaling and suppresses melanoma invasion and resistance to the targeted therapy.	EPB41L4B CPD CCDC77 ANKLE2 GLI3 SECISBP2 NBR1 GOLGB1	1.42e-05	263	143	8	34702444
Pubmed	Cholesterol modification of sonic hedgehog is required for long-range signaling activity and effective modulation of signaling by Ptc1.	PTCH1 GLI1 GLI3	1.46e-05	12	143	3	11389830
Pubmed	Dual function of suppressor of fused in Hh pathway activation and mouse spinal cord patterning.	PTCH1 GLI1 GLI3	1.46e-05	12	143	3	22182519
Pubmed	Spop regulates Gli3 activity and Shh signaling in dorsoventral patterning of the mouse spinal cord.	PTCH1 GLI1 GLI3	1.46e-05	12	143	3	28412462
Pubmed	Paracrine Hedgehog signaling in stomach and intestine: new roles for hedgehog in gastrointestinal patterning.	PTCH1 GLI1 GLI3	1.46e-05	12	143	3	19445942
Pubmed	Attenuated sensing of SHH by Ptch1 underlies evolution of bovine limbs.	PTCH1 GLI1 GLI3	1.46e-05	12	143	3	24990743
Pubmed	Hedgehog signaling regulates differentiation from double-negative to double-positive thymocyte.	PTCH1 GLI1 GLI3	1.46e-05	12	143	3	10981962
Pubmed	Vsx2/Chx10 ensures the correct timing and magnitude of Hedgehog signaling in the mouse retina.	PTCH1 GLI1 GLI3	1.46e-05	12	143	3	18417110
Interaction	TRIM28 interactions	USP36 ZBTB33 ZNF354A ATRX ZNF268 ZFP30 ZKSCAN8 ZNF208 ZNF227 PTCH1 DCTN1 TRRAP ZNF354B ZNF529 ZNF284 ZNF7 ZNF34 ZNF17 ZNF19 ZNF182 ZNF33A BRCA2 ZNF780A ZNF45 ZNF728 ZNF587 ZNF92 B3GNT2 ZNF558 ZNF624 ZNF761 ZNF107 ZNF417 DNAH5 ZFP82	9.37e-11	1474	141	35	int:TRIM28
Interaction	ZNF467 interactions	USP36 ZNF354A ZFP30 ZKSCAN8 ZNF92 ZNF624 ZNF761 ZNF107 ZFP62	4.82e-06	179	141	9	int:ZNF467
Interaction	NOTCH2 interactions	ZBTB33 ZNF189 ZKSCAN8 ZSCAN25 ZNF7 SULF2 ZNF780A ZNF92 ZNF624 ZNF761 ZNF107 ZNF417 ZNF646	8.87e-06	423	141	13	int:NOTCH2
Interaction	LTBP2 interactions	ZNF17 ZNF92 ZNF624 ZNF107 ZNF417 ZNF646	2.93e-05	85	141	6	int:LTBP2
Interaction	CBX6 interactions	RBM4B ZFP30 BCORL1 ZKSCAN8 ZKSCAN7 ZNF7 ZNF33A ZNF92 ZNF624 ZNF107	3.12e-05	283	141	10	int:CBX6
Interaction	ZNF324B interactions	ZKSCAN8 ZSCAN25 ZNF780A ZNF92 ZNF624 ZNF107	3.80e-05	89	141	6	int:ZNF324B
Cytoband	Ensembl 112 genes in cytogenetic band chr19q13	ZNF134 ZFP30 ZNF180 ZNF227 ZNF529 ZNF284 ZNF404 ZNF17 ZNF780A ZNF45 ZNF587 ZNF761 ZNF417 ZFP82	2.34e-05	1192	143	14	chr19q13
Cytoband	3p21.32	ZKSCAN7 ZNF35	9.58e-05	5	143	2	3p21.32
GeneFamily	Zinc fingers C2H2-type\|ZF class homeoboxes and pseudogenes	ZNF134 ZNF609 ZBTB33 ZNF354A ZNF268 ZFP30 ZNF180 ZNF189 ZKSCAN8 OSR2 ZNF208 ZKSCAN7 ZNF619 ZNF227 ZSCAN25 ZNF354B SNAI3 ZNF529 IKZF4 ZNF284 ZNF404 ZNF7 ZNF34 ZNF17 ZNF19 ZNF182 ZNF33A ZNF35 ZNF780A ZNF45 ZNF728 GLI1 GLI3 ZNF587 ZNF846 ZNF92 ZNF558 OSR1 ZNF624 ZNF761 ZNF319 ZNF107 ZNF417 ZFP82 ZFP62 ZNF646	1.10e-35	718	109	46	28
Coexpression	GSE2706_UNSTIM_VS_2H_LPS_DC_UP	C14orf93 ZNF354A ZNF268 ZNF284 ZNF7 ZNF34 MTFR2 EDRF1 ZFP82 ZFP62	1.37e-07	197	143	10	M4695
Coexpression	NAKAYA_MONOCYTE_FLUMIST_AGE_18_50YO_7DY_UP	MON2 CRISPLD2 ZNF354A CPD ANKLE2 TRRAP CCDC88C RESF1 SLC15A2 ZNF780A ZNF45 HERC2	1.27e-05	477	143	12	M40930
CoexpressionAtlas	facebase_RNAseq_e10.5_Emin_LatNas_2500_K3	ZWILCH ZBTB33 ZNF354A PDE7A ATRX CLASP1 ZFP30 ZKSCAN8 CCDC77 DCUN1D4 CEP128 USP16 GDNF ZNF7 CCDC88C ORC4 CNOT6L BRCA2 GLI3 ZNF624 ZNF761 MTFR2 ANKFN1 ZFP62	3.03e-06	1257	142	24	facebase_RNAseq_e10.5_Emin_LatNas_2500_K3
CoexpressionAtlas	facebase_RNAseq_e10.5_Emin_LatNas_2500	ZWILCH ZBTB33 ZNF354A PDE7A ATRX CLASP1 ZFP30 ZKSCAN8 CCDC77 DCUN1D4 CEP128 USP16 GDNF ZNF7 CCDC88C ORC4 CNOT6L BRCA2 GLI3 ZNF624 ZNF761 MTFR2 ANKFN1 ZFP62	3.60e-05	1459	142	24	facebase_RNAseq_e10.5_Emin_LatNas_2500
ToppCell	Tracheal-NucSeq-Stromal-Peri/Epineurial_-NAF_endoneurial\|NucSeq / Cell types per location group and 10X technology with lineage, and cell group designations	CRISPLD2 PODNL1 OSR2 ZMAT4 PTCH1 CPED1 ZFHX4 ZNF728 DCLK1	1.33e-08	193	143	9	549a0b750c860b615aff767ad04c9a9d20f802f0
ToppCell	distal-mesenchymal-Mesothelial-1\|distal / Location, Lineage, Cell class (ontology) and Donor from 10X sequencing (macrophage renamed)	CRISPLD2 TGM1 SULF2 ZFHX4 GLI3 OSR1 CDH18 TPBG	2.61e-07	198	143	8	431bf719ee5cce4c9e8b6b405819b67e98fad3ca
ToppCell	distal-mesenchymal-Mesothelial\|distal / Location, Lineage, Cell class (ontology) and Donor from 10X sequencing (macrophage renamed)	CRISPLD2 TGM1 SULF2 ZFHX4 GLI3 OSR1 CDH18 TPBG	2.61e-07	198	143	8	52e3cb45472dd6db31ae533e9ea0c3b550f11496
ToppCell	renal_medulla_nuclei-CKD+DKD_normotensive-Mesenchymal-Fibroblast-Collagen-low_Matrisome-low_fibroblast\|CKD+DKD_normotensive / Celltypes from Cells and Nuclei per compartment and clinical group	CRISPLD2 RIPOR3 CPED1 GDNF GLI3 LPIN2 DCLK1	3.17e-06	194	143	7	90efdbd7f1c85fd7fd622b10340250b1d8fc1197
ToppCell	renal_medulla_nuclei-CKD+DKD_normotensive-Mesenchymal-Fibroblast-Collagen-low_Matrisome-low_fibroblast-\|CKD+DKD_normotensive / Celltypes from Cells and Nuclei per compartment and clinical group	CRISPLD2 RIPOR3 CPED1 GDNF GLI3 LPIN2 DCLK1	3.17e-06	194	143	7	df82cce5ebeb73740b02cf816c6df82253cfd566
ToppCell	kidney_cells-Adult_normal_reference-Mesenchymal-Fibroblast\|Adult_normal_reference / Celltypes from Cells and Nuclei per compartment and clinical group	CRISPLD2 PODNL1 OSR2 POSTN ZFHX4 OSR1 DCLK1	3.28e-06	195	143	7	47762d9e442fb1f6f0033e3e10f4c6e498d2c081
ToppCell	Bronchial-NucSeq-Stromal-Peri/Epineurial_-NAF_endoneurial\|NucSeq / Cell types per location group and 10X technology with lineage, and cell group designations	CRISPLD2 OSR2 PTCH1 CPED1 CLMN GLI1 DCLK1	3.51e-06	197	143	7	6806ec223e542f0475303698eb78c1cc527f5c6b
ToppCell	10x3'2.3-week_12-13-Mesenchymal_fibro-stroma-arteriolar_fibroblast\|week_12-13 / cell types per 3 fetal stages;per 3',per 5'	OSR2 POSTN ZFHX4 OSR1 DCLK1 CDH18 TPBG	3.87e-06	200	143	7	fee22a6a6c7b93af204b5b56f2c34f1411500e18
ToppCell	PND07-28-samps-Mesenchymal-Myofibroblast-MyoFB-3\|PND07-28-samps / Age Group, Lineage, Cell class and subclass	CRISPLD2 ZNF189 ZMAT4 GDNF CLCA2 OSR1	6.39e-06	141	143	6	7ae8ead02e5aeb4106c4a30c08a7a061da3a5d6a
ToppCell	Frontal_cortex-Endothelial-ENDOTHELIAL_TIP-Dcn_1\|Frontal_cortex / BrainAtlas - Mouse McCarroll V32	PODNL1 OSR2 RIPOR3 CPED1 POSTN OSR1	1.06e-05	154	143	6	65dbb60f636562eeba3dafadae9c0c7db2b27476
ToppCell	droplet-Lung-3m-Mesenchymal-fibroblast-adventitial_fibroblast-adventitial_fibroblast_l49\|3m / method, tissue, age, lineage, sublineage, cell ontologies, cell type and subtype	CRISPLD2 OSR2 CPED1 GSTA4 GLI3 TPBG	1.73e-05	168	143	6	d2b91f2adc95dcfa623f8d7ca2df1c6f884da988
ToppCell	kidney_cells-Hypertensive_with+without-CKD-Mesenchymal-Fibroblast-kidney_interstitial_fibroblast-Adaptive_/_Maladaptive_/_Repairing_Fibroblast\|Hypertensive_with+without-CKD / Celltypes from Cells and Nuclei per compartment and clinical group	OSR2 PTCH1 ZFHX4 GLI3 OSR1 DCLK1	2.11e-05	174	143	6	9c916af5eebd932f67dc9117e1d26ff194a2ff2c
ToppCell	kidney_cells-Hypertensive_with+without-CKD-Mesenchymal-Fibroblast-kidney_interstitial_fibroblast\|Hypertensive_with+without-CKD / Celltypes from Cells and Nuclei per compartment and clinical group	OSR2 PTCH1 ZFHX4 GLI3 OSR1 DCLK1	2.11e-05	174	143	6	bc71521f44a5fe013af42b06b5d1bd2446ecf3b5
ToppCell	P15-Endothelial-lymphatic_endothelial_cell-endothelial_cell_of_lymphatic_vessel\|P15 / developmental_time, Lineage, Cell group, Cell type, Cell type_cellcyc-phase	SELENOP RIPOR3 ADAM10 ZFHX4 CLCA2 OSR1	2.18e-05	175	143	6	84d252f3e432231687613299bbea14978bb4b06b
ToppCell	P15-Endothelial-lymphatic_endothelial_cell\|P15 / developmental_time, Lineage, Cell group, Cell type, Cell type_cellcyc-phase	SELENOP RIPOR3 ADAM10 ZFHX4 CLCA2 OSR1	2.18e-05	175	143	6	a00c6fa9b33640710dd05a3799031147196f0986
ToppCell	E16.5-Mesenchymal-Mesenchymal_structural-Fibroblastic-AF2-AF2_prolif\|E16.5 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif	PLXNA3 MAN2B2 DCUN1D4 CEP128 POSTN CLCA2	2.33e-05	177	143	6	30f82b04e48940bfcaf2c22677efe6d57ae3f1a7
ToppCell	TCGA-Brain-Primary_Tumor-Low_Grade_Glioma\|TCGA-Brain / Sample_Type by Project: Shred V9	ELFN2 FCHSD2 ZNF33A MARF1 NBR1 GOLGB1	2.33e-05	177	143	6	e8ab340b20cd41554c3841fe980e078e878af35f
ToppCell	facs-Brain_Non-Myeloid-Cerebellum-3m-Epithelial-neuroepithelial_cell\|Brain_Non-Myeloid / Brain_Non-Myeloid_Brain_Myeloid - method, tissue, subtissue, age, lineage, cell ontology and free annotation	ZNF609 MFSD9 POSTN CLCA2 UNC13C CTF1	2.72e-05	182	143	6	9174fb0b7ed8f721a5c513e41fd80476a9f34332
ToppCell	B_cells-ISG-high_B_cells\|World / Immune cells in Kidney/Urine in Lupus Nephritis	FCHSD2 BRCA2 SLC15A2 ZNF92 LPIN2 ZNF107	2.81e-05	183	143	6	dc2b00e920efa1dcc2a6265cd1024e3249c9974f
ToppCell	COVID-19-B_cells-Plasma_cells\|COVID-19 / group, cell type (main and fine annotations)	TSHR CEP128 CCDC88C FCHSD2 SLC15A2 IGHG4	2.81e-05	183	143	6	130c109f63a5e3c8f83cb96e32f4addf513b6415
ToppCell	COVID-19-B_cells\|COVID-19 / group, cell type (main and fine annotations)	TSHR CEP128 CCDC88C FCHSD2 SLC15A2 IGHG4	2.81e-05	183	143	6	2c016bb59f131a0e821853b085289a3583f0a729
ToppCell	5'-Adult-LargeIntestine-Mesenchymal-myocytic-myofibroblast\|Adult / Celltypes from developing, pediatric, Crohn's, & adult GI tract	CRISPLD2 PTCH1 CPED1 POSTN GLI1 OSR1	2.81e-05	183	143	6	af8d86f15a549064530d94bd47081daf59d58ecd
ToppCell	Frontal_cortex-Endothelial-ENDOTHELIAL_TIP\|Frontal_cortex / BrainAtlas - Mouse McCarroll V32	OSR2 CPED1 ZFHX4 GLI1 GLI3 OSR1	2.90e-05	184	143	6	235890e8b424f4386b6ea52d173d20a00898df73
ToppCell	CV-Moderate-7\|CV / Virus stimulation, Condition and Cluster	MON2 CLASP1 ADAM10 SUGCT ZNF587 ZNF107	3.08e-05	186	143	6	8571956890fc9894d766ba294a28e376b4aba428
ToppCell	5'-Adult-Appendix-Mesenchymal-fibroblastic-mLN_Stroma_(FMO2+)\|Adult / Celltypes from developing, pediatric, Crohn's, & adult GI tract	CRISPLD2 RIPOR3 ZFHX4 OSR1 ANKFN1 DCLK1	3.08e-05	186	143	6	7582b5154d8e5a4434817b5ab77a10b789ea2288
ToppCell	390C-Lymphocytic-CD4_T-cell-Treg_cell_1\|CD4_T-cell / Donor, Lineage, Cell class and subclass (all cells)	CEP128 DCTN1 IKZF4 ZNF7 ZNF558 MARF1	3.27e-05	188	143	6	2c4e791df69a9df29922f9117e5cac7787c129ce
ToppCell	5'-Adult-LargeIntestine-Mesenchymal-fibroblastic-Stromal_2_(NPY+)\|Adult / Celltypes from developing, pediatric, Crohn's, & adult GI tract	CRISPLD2 PTCH1 CPED1 GDNF POSTN DNAH5	3.27e-05	188	143	6	997dcfc4f08738ab398d8abc15e4fd2fc6619862
ToppCell	renal_cortex_nuclei-Renal_AKI_(acute_kidney_injury)-Mesenchymal-Fibroblast-high_collagen-matrisome_fibroblast\|Renal_AKI_(acute_kidney_injury) / Celltypes from Cells and Nuclei per compartment and clinical group	CRISPLD2 RIPOR3 PTCH1 CPED1 GLI3 DCLK1	3.36e-05	189	143	6	71397e993a77d70b2eeede240bdfc7660b558987
ToppCell	renal_cortex_nuclei-Renal_AKI_(acute_kidney_injury)-Mesenchymal-Fibroblast-high_collagen-matrisome_fibroblast-\|Renal_AKI_(acute_kidney_injury) / Celltypes from Cells and Nuclei per compartment and clinical group	CRISPLD2 RIPOR3 PTCH1 CPED1 GLI3 DCLK1	3.36e-05	189	143	6	4eea4759520c312bd17a681034d8074e47093d2b
ToppCell	10x5'v1-week_14-16-Mesenchymal_fibro-stroma\|week_14-16 / cell types per 3 fetal stages;per 3',per 5'	OSR2 POSTN ZFHX4 OSR1 DCLK1 TPBG	3.36e-05	189	143	6	eccf3d49354a67c94f1ed7c15a98a48a5e8e2ed0
ToppCell	10x5'v1-week_14-16-Mesenchymal_fibro\|week_14-16 / cell types per 3 fetal stages;per 3',per 5'	OSR2 POSTN ZFHX4 OSR1 DCLK1 TPBG	3.36e-05	189	143	6	40764f461b8aa1d3a2c5a30590b7fb9307d47d09
ToppCell	Adult-Mesenchymal-matrix_fibroblast_2_cell-D175\|Adult / Lineage, Cell type, age group and donor	CRISPLD2 RIPOR3 GLI3 OSR1 ANKFN1 DCLK1	3.46e-05	190	143	6	7dcca3469f3a3b70db0420cb94f7765f39492f06
ToppCell	10x5'v1-week_14-16-Mesenchymal_fibro-stroma-arteriolar_fibroblast\|week_14-16 / cell types per 3 fetal stages;per 3',per 5'	OSR2 POSTN ZFHX4 OSR1 DCLK1 TPBG	3.57e-05	191	143	6	5271198116343c07202649889057e5774d7fdde3
ToppCell	PND03-Mesenchymal-Mesenchymal_structural-Fibroblastic-AF2\|PND03 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif	OSR2 CPED1 POSTN GLI1 OSR1 DCLK1	3.67e-05	192	143	6	ad48c941a3ddfd9a5146bafc2209da577bb50531
ToppCell	renal_cortex_nuclei-Renal_AKI_(acute_kidney_injury)-Mesenchymal-Fibroblast\|Renal_AKI_(acute_kidney_injury) / Celltypes from Cells and Nuclei per compartment and clinical group	CRISPLD2 RIPOR3 CPED1 ZFHX4 GLI3 DCLK1	3.67e-05	192	143	6	5105e4b577408b4e1a62d0a44c23c2b830ccad88
ToppCell	renal_cortex_nuclei-Renal_AKI_(acute_kidney_injury)-Mesenchymal\|Renal_AKI_(acute_kidney_injury) / Celltypes from Cells and Nuclei per compartment and clinical group	CRISPLD2 RIPOR3 CPED1 ZFHX4 GLI3 DCLK1	3.67e-05	192	143	6	d3c1ad4667a1e223a83ca0fcd5991a0b96f1199a
ToppCell	kidney_cells-Adult_normal_reference-Mesenchymal-Fibroblast-Degenerative_Fibroblast-Degenerative_Fibroblast_119\|Adult_normal_reference / Celltypes from Cells and Nuclei per compartment and clinical group	CRISPLD2 PODNL1 OSR2 POSTN ZFHX4 OSR1	3.67e-05	192	143	6	f88aba74d6e8c594c32fe2bc095b5da28b4b28e9
ToppCell	kidney_cells-Adult_normal_reference-Mesenchymal-Fibroblast-Degenerative_Fibroblast\|Adult_normal_reference / Celltypes from Cells and Nuclei per compartment and clinical group	CRISPLD2 PODNL1 OSR2 POSTN ZFHX4 OSR1	3.67e-05	192	143	6	41a8326cd5bc19ad5041068501bab4c72399222e
ToppCell	PND03-Mesenchymal-Mesenchymal_structural-Fibroblastic-AF2-AF2_mature\|PND03 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif	OSR2 CPED1 POSTN GLI1 OSR1 DCLK1	3.67e-05	192	143	6	19b94f254d51b9bda3d9b7c6f85e27ecb58409c8
ToppCell	droplet-Trachea-nan-3m-Mesenchymal-mesenchymal_progenitor_cell\|Trachea / Lung_Trachea - method, tissue, subtissue, age, lineage, cell ontology and free annotation	CRISPLD2 SELENOP OSR2 SULF2 OSR1 DCLK1	3.89e-05	194	143	6	3d25d6ebec8d1b6001f602257cd15b3ba04cf0c1
ToppCell	3'-Pediatric_IBD-SmallIntestine-Mesenchymal-myocytic-myofibroblast\|Pediatric_IBD / Celltypes from developing, pediatric, Crohn's, & adult GI tract	CRISPLD2 PTCH1 CPED1 GDNF POSTN OSR1	4.01e-05	195	143	6	eb2003d4f15cad213d17eda8ab7479f5a0c62164
ToppCell	3'-Pediatric_IBD-SmallIntestine-Mesenchymal-myocytic\|Pediatric_IBD / Celltypes from developing, pediatric, Crohn's, & adult GI tract	CRISPLD2 PTCH1 CPED1 GDNF POSTN OSR1	4.01e-05	195	143	6	44f67437ea65d530133a0240b17f9860d9cc0e99
ToppCell	5'-GW_trimst-1.5-LargeIntestine-Mesenchymal-immature_mesenchymal_cell-Mesoderm_1_(HAND1+)\|GW_trimst-1.5 / Celltypes from developing, pediatric, Crohn's, & adult GI tract	CRISPLD2 ZMAT4 GDNF POSTN ZFHX4 OSR1	4.24e-05	197	143	6	2a90422ba400b951517603a916f34221056d0f3d
ToppCell	distal-mesenchymal-Lipofibroblast-1\|distal / Location, Lineage, Cell class (ontology) and Donor from 10X sequencing (macrophage renamed)	CRISPLD2 ZFHX4 GLI3 OSR1 DCLK1 TPBG	4.24e-05	197	143	6	865010edcd7e3f79f505fcef7b33882095994aa8
ToppCell	10x3'2.3-week_17-19-Mesenchymal_adipo\|week_17-19 / cell types per 3 fetal stages;per 3',per 5'	SELENOP EPB41L4B POSTN ZFHX4 UNC13C DCLK1	4.24e-05	197	143	6	5afddde4e2b5cd55abe11e9b9efae02dbdc3da3a
ToppCell	distal-mesenchymal-Lipofibroblast\|distal / Location, Lineage, Cell class (ontology) and Donor from 10X sequencing (macrophage renamed)	CRISPLD2 ZFHX4 GLI3 OSR1 DCLK1 TPBG	4.24e-05	197	143	6	ceb83bdef16b58ee16193413bfb006f7715728b2
ToppCell	10x3'2.3-week_17-19-Mesenchymal_adipo-stroma-adipo-CAR\|week_17-19 / cell types per 3 fetal stages;per 3',per 5'	SELENOP EPB41L4B POSTN ZFHX4 UNC13C DCLK1	4.24e-05	197	143	6	1baffd087ca194a7355fefbb3bf67befb14fe2de
ToppCell	10x3'2.3-week_17-19-Mesenchymal_adipo-stroma\|week_17-19 / cell types per 3 fetal stages;per 3',per 5'	SELENOP EPB41L4B POSTN ZFHX4 UNC13C DCLK1	4.24e-05	197	143	6	b9745e382baa2725dfcae060701fb53f6c8a31fa
ToppCell	356C-Fibroblasts-Fibroblast-J_(Lipofibroblast)\|356C / Donor, Lineage, Cell class and subclass (all cells)	CRISPLD2 ZFHX4 GLI3 OSR1 DCLK1 TPBG	4.48e-05	199	143	6	675f7c56b03a7918e2d9ca99440df6f27ad8e838
ToppCell	distal-3-mesenchymal-Myofibroblast\|3 / Location, Lineage, Cell class (ontology) and Donor from 10X sequencing (macrophage renamed)	CRISPLD2 PODNL1 PTCH1 GDNF POSTN GLI1	4.48e-05	199	143	6	1f20addc0d138fec02ed6ca4c518169c568de263
ToppCell	5'-GW_trimst-1.5-SmallIntestine-Mesenchymal-fibroblastic-Stromal_3_(C7+)\|GW_trimst-1.5 / Celltypes from developing, pediatric, Crohn's, & adult GI tract	SELENOP POSTN SULF2 ZFHX4 OSR1 DCLK1	4.48e-05	199	143	6	83383d9ae4f501754fd3da0215ce6f0e3c70562c
ToppCell	356C-Fibroblasts-Fibroblast-J_(Lipofibroblast)-\|356C / Donor, Lineage, Cell class and subclass (all cells)	CRISPLD2 ZFHX4 GLI3 OSR1 DCLK1 TPBG	4.48e-05	199	143	6	97d74985018816754d11a55b9fb689690ecb1374
ToppCell	distal-1-mesenchymal-Lipofibroblast\|1 / Location, Lineage, Cell class (ontology) and Donor from 10X sequencing (macrophage renamed)	CRISPLD2 ZFHX4 GLI3 OSR1 DCLK1 TPBG	4.48e-05	199	143	6	a8293db3c42a8d30897858b49aae7acfc18663ba
ToppCell	distal-mesenchymal-Myofibroblast-3\|distal / Location, Lineage, Cell class (ontology) and Donor from 10X sequencing (macrophage renamed)	CRISPLD2 PODNL1 PTCH1 GDNF POSTN GLI1	4.61e-05	200	143	6	069c8949b33ecfdb6da32992002d4060ff6082bc
ToppCell	Control_saline-Mesenchymal_myocytic-Myofibroblastic\|Control_saline / Treatment groups by lineage, cell group, cell type	OSR2 PTCH1 CPED1 GDNF POSTN GLI1	4.61e-05	200	143	6	9d5b3c2dcfa55d50acc2ce2c319d51aa525d4cd1
ToppCell	Control_saline-Mesenchymal_myocytic-Myofibroblastic-MatrixFB_->_Myofibroblast\|Control_saline / Treatment groups by lineage, cell group, cell type	CRISPLD2 PTCH1 CPED1 POSTN ZFHX4 GLI1	4.61e-05	200	143	6	a799fc7bb83ad0524362cb5010df949741fb7bf3
ToppCell	LPS_IL1RA_TNF-Mesenchymal_myocytic-Myofibroblastic-MatrixFB_->_Myofibroblast\|LPS_IL1RA_TNF / Treatment groups by lineage, cell group, cell type	CRISPLD2 PTCH1 CPED1 GDNF POSTN ZFHX4	4.61e-05	200	143	6	09537dc25f8b8b4654a7c183827ee1522a41a4e0
ToppCell	LPS_IL1RA_TNF-Mesenchymal_myocytic-Myofibroblastic\|LPS_IL1RA_TNF / Treatment groups by lineage, cell group, cell type	PTCH1 CPED1 GDNF POSTN ZFHX4 GLI1	4.61e-05	200	143	6	08bf8c00eee6468215edb3611296bfc8784c4d56
ToppCell	3'-Parenchyma_lung-Mesenchymal-Fibroblastic-fibroblastic_type_1-Subpleural_fibroblasts\|3' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5	CRISPLD2 ZFHX4 GLI3 OSR1 DCLK1 TPBG	4.61e-05	200	143	6	d64895354218ebd0217011bae0967a6883bbd1cd
ToppCell	Posterior_cortex-Endothelial-ENDOTHELIAL_TIP-Dcn_1\|Posterior_cortex / BrainAtlas - Mouse McCarroll V32	OSR2 RIPOR3 GDNF POSTN OSR1	4.83e-05	123	143	5	28be15b759c152662b29c323b1cc3f02f7830dbe
ToppCell	3'-Child09-12-SmallIntestine-Hematopoietic-B_cells-STAT1+_Naive_B\|Child09-12 / Celltypes from developing, pediatric, Crohn's, & adult GI tract	ICAM2 CLMN BRPF1 ZNF417 ZFP82	1.31e-04	152	143	5	dd728aa3ffdb2c415730a62678f69cf0e8af09df
ToppCell	Fetal_brain-organoid_Tanaka_cellReport-GW13-Mesenchymal\|GW13 / Sample Type, Dataset, Time_group, and Cell type.	ZNF134 OSR2 LPIN2 TPBG	1.62e-04	85	143	4	3f33e897eb030043905a6a1a83377cd601652958
ToppCell	facs-Marrow-Granulocytes-3m-Lymphocytic-NK_cell\|Marrow / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation	PLXNA3 SNAI3 SULF2 ZNF35 PLOD1	1.62e-04	159	143	5	d2de9391b00b6c47f5fe28a1bad6da2097107ee0
ToppCell	facs-Marrow-Granulocytes-3m-Lymphocytic-NK_cell\|Marrow / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation	PLXNA3 SNAI3 SULF2 ZNF35 PLOD1	1.62e-04	159	143	5	da6b7f8039adc19839d6c090a0b3d68fb6445a79
ToppCell	343B-Epithelial_cells-Epithelial-H_(AT1)-\|Epithelial_cells / Donor, Lineage, Cell class and subclass (all cells)	PODNL1 FAM186B POSTN TGM1 SUGCT	1.72e-04	161	143	5	da9eecf919866a9c579d7a707a996cf335213134
ToppCell	343B-Epithelial_cells-Epithelial-H_(AT1)\|Epithelial_cells / Donor, Lineage, Cell class and subclass (all cells)	PODNL1 FAM186B POSTN TGM1 SUGCT	1.72e-04	161	143	5	d431625c32f59a6b552191f3adc5198bd16ad5cf
ToppCell	10x3'2.3-week_14-16-Myeloid_macrophage-stroma-erythroid_macrophage\|week_14-16 / cell types per 3 fetal stages;per 3',per 5'	PODNL1 SELENOP EPB41L4B GLI3 DCLK1	1.82e-04	163	143	5	240d9f0ea45e8b2c7173e7674fd740555810f9e7
ToppCell	Globus_pallidus-Endothelial-ENDOTHELIAL_TIP-Dcn_1\|Globus_pallidus / BrainAtlas - Mouse McCarroll V32	CRISPLD2 RIPOR3 CPED1 POSTN OSR1	1.93e-04	165	143	5	570483b43ccb5831feec9337b4664814431d40b1
ToppCell	Globus_pallidus-Endothelial-ENDOTHELIAL_TIP\|Globus_pallidus / BrainAtlas - Mouse McCarroll V32	CRISPLD2 RIPOR3 CPED1 POSTN OSR1	1.93e-04	165	143	5	2026a9a07f4d314cc05c167e491312b373468e46
ToppCell	356C-Lymphocytic-CD8+_Cytotoxic_T-cell-CD8+_Cytotoxic_T_cell_6\|356C / Donor, Lineage, Cell class and subclass (all cells)	ZNF831 ZNF529 RESF1 ZNF45 ZFP82	1.98e-04	166	143	5	c4f7ea1cad962b1d6ad77423d15978b68a0d6f1d
ToppCell	droplet-Limb_Muscle-nan-3m-Myeloid-chondrocyte-like\|Limb_Muscle / Tongue_Heart_Limb_Muscle_Aorta_Diaphragm - method, tissue, subtissue, age, lineage, cell ontology and free annotation	RBM4 TSHR DCUN1D4 GLI1 LPIN2	1.98e-04	166	143	5	35db3022c33d6f8bb6587d9eec89a7cccb70271a
ToppCell	Adult-Mesenchymal-chondrocyte-D175\|Adult / Lineage, Cell type, age group and donor	CRISPLD2 MAN2B2 ZFHX4 ZNF587 DCLK1	2.10e-04	168	143	5	14071b961c9bdb54a8259b12a88237b802cbde36
ToppCell	primary_visual_cortex-Neuronal-glutamatergic_neuron-L6_IT-L6_IT_VISp_Col23a1_Adamts2\|primary_visual_cortex / Per Region, Lineage, Cell class, Cell type, Cell subtype	NTSR1 ZNF831 GSTA4 GSE1 OSR1	2.10e-04	168	143	5	3fe432267656aff81b6d92c18d1b6fc0cde73d6a
ToppCell	390C-Lymphocytic-CD4_T-cell-CD4+_Effector_T_cell-2\|390C / Donor, Lineage, Cell class and subclass (all cells)	USP36 RIPOR3 SNAI3 CNOT6L ZNF646	2.15e-04	169	143	5	cfc9ff103d13a2d5eacc457e800f53fdd29f7738
ToppCell	facs-Liver-Non-hepatocytes-3m-Lymphocytic-mature_NK_T_cell\|Liver / Large_Intestine_Pancreas_Liver - method, tissue, subtissue, age, lineage, cell ontology and free annotation	PODNL1 PDE7A OSR2 MYO3A ANKFN1	2.27e-04	171	143	5	d322cc042a6f4b4aa8ef80ae977edbce9e266d48
ToppCell	Smart-start-Cell-Wel_seq-Non-neoplastic-Lymphoid-CD4/CD8-CD4_rest-G\|Smart-start-Cell-Wel_seq / Platform, Oncotype, Lineage, Cell_class, celltype (level4), mutation group	PDE7A ZNF831 CCDC88C CNOT6L RESF1	2.27e-04	171	143	5	e1fe07652c10c37191d1471ddaea500f74269e0c
ToppCell	PND10-Mesenchymal-Mesenchymal_structural-Fibroblastic-AF2\|PND10 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif	OSR2 RIPOR3 CPED1 POSTN OSR1	2.27e-04	171	143	5	15cb4670ff4234ac46aea8a5911138d6913c4482
ToppCell	droplet-Lung-LUNG-30m-Lymphocytic-regulatory_T_cell\|Lung / Lung_Trachea - method, tissue, subtissue, age, lineage, cell ontology and free annotation	PODNL1 ZNF831 CCDC88C B3GNT2 TMPRSS11D	2.34e-04	172	143	5	4d04df9776394ea156ed5822f92ae74fdefbaa3d
ToppCell	droplet-Lung-LUNG-30m-Lymphocytic-Regulatory_T\|Lung / Lung_Trachea - method, tissue, subtissue, age, lineage, cell ontology and free annotation	PODNL1 ZNF831 CCDC88C B3GNT2 TMPRSS11D	2.34e-04	172	143	5	3acf35b774ebc0f9e96299d0bd3e9d03bbf6b90c
ToppCell	PND03-Mesenchymal-Mesenchymal_myocytic-Myofibroblast_vascular-VSMC-VSMC_prolif\|PND03 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif	CRISPLD2 POSTN CLCA2 OSR1 DCLK1	2.40e-04	173	143	5	5c55e1e27e9e3e77600d378cc87b51cc73907527
ToppCell	droplet-Lung-30m-Hematologic-lymphocytic-regulatory_T_cell-regulatory_T_cell\|30m / method, tissue, age, lineage, sublineage, cell ontologies, cell type and subtype	PODNL1 ZNF831 CCDC88C B3GNT2 TMPRSS11D	2.53e-04	175	143	5	3bdccb4037053795d62ab5b6fcc09cdd406f9b50
ToppCell	Control-B_cells-Plasma_cells\|Control / group, cell type (main and fine annotations)	TSHR CEP128 CCDC88C FCHSD2 IGHG4	2.53e-04	175	143	5	fb23858cfce71509cafbe0d9728e678012ff2962
ToppCell	droplet-Lung-30m-Hematologic-lymphocytic-regulatory_T_cell\|30m / method, tissue, age, lineage, sublineage, cell ontologies, cell type and subtype	PODNL1 ZNF831 CCDC88C B3GNT2 TMPRSS11D	2.53e-04	175	143	5	770546ddaa49ee482c4c7577ab76efbc6c304a29
ToppCell	PND07-28-samps-Mesenchymal-Myofibroblast-myofibroblast_-_mature_-_DCN\|PND07-28-samps / Age Group, Lineage, Cell class and subclass	CRISPLD2 POSTN GLI1 OSR1 DCLK1	2.60e-04	176	143	5	08f94b78b27feeb113dbfadbfa7fe34d08b2809b
ToppCell	5'-Adult-Appendix-Mesenchymal-myocytic-myofibroblast\|Adult / Celltypes from developing, pediatric, Crohn's, & adult GI tract	CRISPLD2 PTCH1 CPED1 POSTN GLI1	2.67e-04	177	143	5	e65c0568dc5852108e9802273499bc7cf88fafab
ToppCell	Frontal_cortex-Endothelial-ENDOTHELIAL_TIP-Dcn_1-Dcn_1_2\|Frontal_cortex / BrainAtlas - Mouse McCarroll V32	PODNL1 OSR2 RIPOR3 TEX26	2.70e-04	97	143	4	2cd5cafdf0a9a468baaafd4613d790fc048ee53e
ToppCell	Frontal_cortex-Endothelial-ENDOTHELIAL_TIP-Dcn_1-Dcn_1_2-Endothelial_Tip.Dcn.Coch_(Coch)-\|Frontal_cortex / BrainAtlas - Mouse McCarroll V32	PODNL1 OSR2 RIPOR3 TEX26	2.70e-04	97	143	4	adda7a49b7754ed110e212346768bf52107c26fc
ToppCell	Frontal_cortex-Endothelial-ENDOTHELIAL_TIP-Dcn_1-Dcn_1_2-Endothelial_Tip.Dcn.Coch_(Coch)\|Frontal_cortex / BrainAtlas - Mouse McCarroll V32	PODNL1 OSR2 RIPOR3 TEX26	2.70e-04	97	143	4	6d865ec3a413f595de17e0a5f8c61666ebb3e252
ToppCell	PBMC-Severe-Lymphocyte-B-B_cell-B_naive-B_naive-11\|Severe / Location, Disease Group, Cell group, Cell class and sub_cluster (2021.03.01)	MYO3A FCHSD2 SLC15A2 ZNF92 ZNF107	2.74e-04	178	143	5	5d41fede13c8e64b6fdaf2155f1eb72bcfc32fdb
ToppCell	kidney_cells-Renal_AKI_(acute_kidney_injury)-Mesenchymal-Fibroblast-kidney_interstitial_fibroblast\|Renal_AKI_(acute_kidney_injury) / Celltypes from Cells and Nuclei per compartment and clinical group	OSR2 POSTN TGM1 GLI1 DCLK1	2.88e-04	180	143	5	c2746092ef251e9d5910fe96461afdd0624a24c6
ToppCell	kidney_cells-Renal_AKI_(acute_kidney_injury)-Mesenchymal-Fibroblast-kidney_interstitial_fibroblast-Adaptive_/_Maladaptive_/_Repairing_Fibroblast\|Renal_AKI_(acute_kidney_injury) / Celltypes from Cells and Nuclei per compartment and clinical group	OSR2 POSTN TGM1 GLI1 DCLK1	2.88e-04	180	143	5	32c6a3886428d82fb4355d987c6d2645f333447b
ToppCell	P28-Mesenchymal-mesenchymal_fibroblast-mesenchymal_alveolar_niche_cell\|P28 / developmental_time, Lineage, Cell group, Cell type, Cell type_cellcyc-phase	OSR2 CPED1 GLI1 OSR1 DCLK1	2.88e-04	180	143	5	9adebde5f4ca6dcb90e9113622862e14298465ac
ToppCell	wk_08-11-Mesenchymal-Fibroblast-Mesenchymal_1\|wk_08-11 / Celltypes from embryonic and fetal-stage human lung	GDNF SULF2 ZFHX4 OSR1 TPBG	2.96e-04	181	143	5	7e3bcfa2ba5b98a7df5854aa6e7a31e9a71faa8a
ToppCell	facs-Lung-18m-Mesenchymal-fibroblast-alveolar_fibroblast-alveolar_fibroblast_l1\|18m / method, tissue, age, lineage, sublineage, cell ontologies, cell type and subtype	CRISPLD2 SUGCT CLMN OSR1 ZFP82	2.96e-04	181	143	5	ebf1ae963a2b22e1772752ed85a4fb0e546d377e
ToppCell	wk_08-11-Mesenchymal-Fibroblast-Mesenchymal_2\|wk_08-11 / Celltypes from embryonic and fetal-stage human lung	OSR2 ZMAT4 ZFHX4 ZNF728 TPBG	2.96e-04	181	143	5	9b2d207dc9fc2228a1555ed360286bb7c2d988ff
ToppCell	Fetal_29-31_weeks-Mesenchymal-myofibroblast_cell-D062\|Fetal_29-31_weeks / Lineage, Cell type, age group and donor	PTCH1 CPED1 POSTN SUGCT UNC13C	2.96e-04	181	143	5	d7e04e0ca549eac6d9b1192b6578f9b54943d54f
ToppCell	facs-Brain_Non-Myeloid-Cerebellum_-18m-Epithelial-neuroepithelial_cell\|Brain_Non-Myeloid / Brain_Non-Myeloid_Brain_Myeloid - method, tissue, subtissue, age, lineage, cell ontology and free annotation	CRISPLD2 CEP128 CPED1 MTFR2 ANKFN1	2.96e-04	181	143	5	c26d3cbbc592299786d79d1b15fc6bead2aafb9a
ToppCell	facs-Lung-24m-Endothelial-lymphatic_endothelial-lymphatic_endothelial_cell\|24m / method, tissue, age, lineage, sublineage, cell ontologies, cell type and subtype	SELENOP RIPOR3 CLCA2 OSR1 PLOD1	3.03e-04	182	143	5	2cc434e46985c66fc36de05344a67aa96d90abc9
ToppCell	facs-Lung-24m-Endothelial-lymphatic_endothelial\|24m / method, tissue, age, lineage, sublineage, cell ontologies, cell type and subtype	SELENOP RIPOR3 CLCA2 OSR1 PLOD1	3.03e-04	182	143	5	0cde2775bdaaa2172499925bd59b0ac2d545eb27
ToppCell	facs-Lung-24m-Endothelial-lymphatic_endothelial-lymphatic_endothelial_cell-lymphatic_endothelial_cell\|24m / method, tissue, age, lineage, sublineage, cell ontologies, cell type and subtype	SELENOP RIPOR3 CLCA2 OSR1 PLOD1	3.03e-04	182	143	5	3e7457b2a70b45735fb75d6617b7f34cef28758e
Drug	vinylene	ZBTB33 ZNF354A ZNF180 OSR2 ZKSCAN7 ZNF33A CIAO3 GLI1 ZNF319 ZNF107	3.54e-06	245	143	10	CID000006326
Drug	retinoic acid; Up 200; 1uM; PC3; HT_HG-U133A	PODNL1 GPR17 PTCH1 POSTN CLCA2 SLC15A2 PTPRN2 CTF1 ZNF646	4.83e-06	199	143	9	4435_UP
Disease	spina bifida (is_marker_for)	PTCH1 GLI1	2.14e-05	2	137	2	DOID:0080016 (is_marker_for)
Disease	nevoid basal cell carcinoma syndrome (is_marker_for)	PTCH1 GLI1	6.40e-05	3	137	2	DOID:2512 (is_marker_for)
Disease	synophrys measurement	PTCH1 ZFHX4 SUGCT HERC2	2.88e-04	68	137	4	EFO_0007906
Disease	primary bacterial infectious disease (implicated_via_orthology)	GLI1 GLI3	7.54e-04	9	137	2	DOID:0050338 (implicated_via_orthology)
Disease	Graves Disease	TSHR B3GNT2	7.54e-04	9	137	2	C0018213
Disease	Pancreatic Neoplasm	ATRX PTCH1 BRCA2 SUGCT	1.24e-03	100	137	4	C0030297
Disease	Malignant neoplasm of pancreas	ATRX PTCH1 BRCA2 SUGCT	1.33e-03	102	137	4	C0346647
Disease	Gastrointestinal Stromal Sarcoma	PTCH1 GLI1 GLI3	1.37e-03	47	137	3	C3179349
Disease	Malignant neoplasm of breast	KDM3A BCORL1 MFSD9 ADAM10 ZNF404 SULF2 CLCA2 BRCA2 GLI1 HERC2 PLOD1 GOLGB1 ZNF646	1.52e-03	1074	137	13	C0006142
Disease	Gastrointestinal Stromal Tumors	PTCH1 GLI1 GLI3	1.64e-03	50	137	3	C0238198
Disease	behavior	ZMAT4 PTCH1 PTPRN2	2.15e-03	55	137	3	GO_0007610
Disease	Hallux valgus	TSHR CLCA2 ANKFN1	2.76e-03	60	137	3	HP_0001822
Disease	pre-malignant neoplasm (biomarker_via_orthology)	GLI1 GLI3	2.78e-03	17	137	2	DOID:0060071 (biomarker_via_orthology)
Disease	chemerin measurement	PTCH1 UNC13C	3.47e-03	19	137	2	EFO_0004573
Disease	squamous cell carcinoma	IKZF4 BRCA2 HERC2	3.78e-03	67	137	3	EFO_0000707
Disease	colorectal adenoma (is_marker_for)	SELENOP PTCH1	3.85e-03	20	137	2	DOID:0050860 (is_marker_for)
Disease	Prostate cancer, familial	BRCA2 SUGCT DENND4B	4.10e-03	69	137	3	C2931456
Disease	Malignant Glioma	ATRX GDNF BRCA2	4.27e-03	70	137	3	C0555198
Disease	mixed gliomas	ATRX GDNF BRCA2	4.27e-03	70	137	3	C0259783

Protein segments in the cluster

Peptide	Gene	Start	Entry
IDNSKYKTNHLRVHN	SUGCT	311	Q9HAC7
LSTLANIHKIYHTLN	DCUN1D4	16	Q92564
QLQEKHHRISLEYSE	RNF40	246	O75150
LSSHHLIVKNSRNKY	ANKLE2	431	Q86XL3
RNSLQHHQDDTKYRT	CEP128	1006	Q6ZU80
HSLAHLLTKYAEQLL	CTF1	31	Q16619
SLLQATLHRYEHALS	DCTN1	661	Q14203
FYSKTELQLHQHILT	CPED1	106	A4D0V7
SYNVDSLHQKHQRAK	ADAM10	36	O14672
ARHYSLSLTAEQLSH	GSE1	1156	Q14687
QLYREKASHHALVSL	GPR17	211	Q13304
QYRSHHAQDKSLLSQ	BCORL1	1276	Q5H9F3
LTKNLHHTQELLYES	CCDC77	271	Q9BR77
NRYLSQLKDAHRSHP	COPE	271	O14579
HKENRSLETKYRHLQ	FAM186B	251	Q8IYM0
TAAEDAIRNLHHYKL	RBM4	46	Q9BWF3
TYDHSRVLLKAENSH	PTPRN2	781	Q92932
RVLLKAENSHSHSDY	PTPRN2	786	Q92932
HHKNQTLLYNLFDIS	ORC4	166	O43929
AYSRLENLKTHLRSH	GLI3	556	P10071
HKNILSASSTYFHQL	ZBTB33	46	Q86T24
YKHNSQALLLHSSIL	MFSD9	346	Q8NBP5
KKSLQSLQSTVHYHL	NTSR1	91	P30989
YQTKEDQEILHSLHR	EDRF1	771	Q3B7T1
SSKHTHITLDNRAEY	HERC2	4616	O95714
ASAIKYLHSLNIVHR	DCLK1	496	O15075
YTLLQNHHTAKETEN	CCDC88C	1136	Q9P219
DHRHIYLLSEKQVSQ	PLXNA3	471	P51805
LATLYKNTSVLENHH	PDE7A	271	Q13946
YVSLHVRKSNRAALH	NAA10	106	P41227
LEELLSKYQHNESHS	CRISPLD2	31	Q9H0B8
IYSHRILKNLHDTED	LCA5L	336	O95447
LDDNLVYHILRKHSA	GDNF	191	P39905
SYSRLENLKTHLRSH	GLI1	311	P08151
SSQYLDDVSLHHLIN	MON2	756	Q7Z3U7
FTKSYNLLIHERTHT	OSR2	181	Q8N2R0
TAAEDAIRNLHHYKL	RBM4B	46	Q9BQ04
HVSHLNANIKSSSRY	NDUFA9	166	Q16795
KSYNLLIHERTHTDE	OSR1	186	Q8TAX0
LSLDSYRTTHLHNDL	PLOD1	506	Q02809
HTNYHAALRCESLKL	PANK4	731	Q9NVE7
HSLEYLDLSHNQLTT	PODNL1	266	Q6PEZ8
VQTRSILHYIADKHN	GSTA4	66	O15217
EIHTNHKTLYDLKTQ	ATRX	756	P46100
ETHLHKQAYRTNSEA	CSGALNACT2	526	Q8N6G5
RYLSQTHTNHEDKLQ	KDM3A	1281	Q9Y4C1
HLYEHLTLEKSSSNL	BRCA2	2361	P51587
HQESELHSYLSRLIA	STUB1	156	Q9UNE7
RLTELCYHLDANSKH	C14orf93	451	Q9H972
SSLKETHIKLQEHYN	CCDC73	366	Q6ZRK6
KETLKHLASLYANNH	CPD	1116	O75976
ELKRHYESTHNTPLN	MARF1	1436	Q9Y4F3
RYSSNHTEHSQNLRK	MAN2B2	886	Q9Y2E5
LDREQKTHYVLHAQA	CDH18	116	Q13634
SRERSSHKLYSQLLH	DENND4B	611	O75064
ALHNHYTQKSLSLSL	IGHG4	311	P01861
NSKATHARNDYLLTL	FCHSD2	201	O94868
HNLSLYTEHSVQEKN	SLC15A2	471	Q16348
HHSNYSLSLTLENKE	EPB41L4B	516	Q9H329
HKERCHNYLQSLSTE	IKZF4	266	Q9H2S9
TSLNHKYFRNHLEDS	DNAH5	3626	Q8TE73
DHYINHLLQSTSLRS	PHKA2	661	P46019
LLQSFSDHHENKYLL	TRPC4AP	461	Q8TEL6
GLVNSRQKSYDHSRH	NBR1	861	Q14596
IHHSQESKTYNILRN	RESF1	1521	Q9HCM1
FNTLYRLKAHQRLHT	MTF1	211	Q14872
QHLLYDLHRSFSNVK	PTCH1	816	Q13635
RGSHHLSIYAENSLK	SECISBP2	176	Q96T21
KHYLVSNISHDTVLQ	ICAM2	76	P13598
HQGISSRLKYTHLKN	SELENOP	91	P49908
NLRAHLQTHSDAKKY	SNAI3	251	Q3KNW1
KSVQIAYHRALQHRS	BRPF1	1186	P55201
NTHHILNYLNSLSKT	B3GNT2	251	Q9NY97
ITIQDILSYHKRSHQ	ANKFN1	591	Q8N957
LHEYKSSSHRIFRLN	CLMN	81	Q96JQ2
RLLHTQYHAVEKAST	CIAO3	456	Q9H6Q4
TYTLNNTHHSLQALK	CLCA2	576	Q9UQC9
HTLESSYQKALQSHL	CLASP1	526	Q7Z460
THLTALHLNDNYLSR	CNOT6L	56	Q96LI5
RNILIHNNYKSATHE	TMPRSS11D	256	O60235
SYSSQLARHQKVHIT	ZNF35	316	P13682
RLSTYLIQHQKIHTG	ZNF189	326	O75820
AYNRFSNLTIHKRIH	ZNF107	616	Q9UII5
RNKSYLSVHQKTHTE	ZNF624	426	Q9P2J8
YTNSVDKLRLHTTNH	ZFHX4	981	Q86UP3
KLQIHSQYHAIRAAT	ZFHX4	1366	Q86UP3
SQKSYLIIHQRTHTE	ZNF182	496	P17025
NSLLSKLIHQSYHGT	ZWILCH	391	Q9H900
SQLTQHKKIHTREYS	ZNF92	186	Q03936
YSSLLRKHQIIHLAD	ZNF761	226	Q86XN6
TFLNQSSLKLHIRSH	ZNF846	206	Q147U1
LSRHQRIHTSDKLYE	ZFP30	201	Q9Y2G7
SSKSYLLVHQQTHAE	ZNF268	286	Q14587
SQEQHALKHYLTPRS	USP16	86	Q9Y5T5
QLKRHLRIHTQESSY	ZNF19	371	P17023
LHENLFHYLTEVKSN	UNC13C	1366	Q8NB66
HSYLQRQSVSDLEKH	RIPOR3	766	Q96MK2
SRSYLTIHKRIHNGE	ZNF558	191	Q96NG5
TSNSYLSVHKRIHNR	ZNF558	386	Q96NG5
SYSRKSSLIQHQRVH	ZNF587	276	Q96SQ5
SNLVRHQRTHEEKSY	ZSCAN25	361	Q6NSZ9
SYSRKSSLIQHQRVH	ZNF417	276	Q8TAU3
SHLSQHKRIYTRENS	ZNF728	186	P0DKX0
SKALDILQQHASHYK	ZNF609	1296	O15014
KTYKHAGSLTNHRQS	ZNF646	246	O15015
LLNHNTNKTDRHYCL	ZNF646	1546	O15015
STHHTDGLSKIRLNY	SENP6	901	Q9GZR1
RLYLQLSQHQKTHTG	ZNF780A	511	O75290
TNYSHHSKSQRNKDI	MTFR2	256	Q6P444
SYLLVEHQRSHTGEK	ZNF404	311	Q494X3
NKSYLTKHNRTHTGE	ZNF33A	591	Q06730
INSYKLIRHQATHTE	ZNF180	671	Q9UJW8
AYKRASALQKHQLAH	ZNF319	436	Q9P2F9
FRQYAHLTRHQKLNS	ZFP82	291	Q8N141
HLTRHQKLNSADRLY	ZFP82	296	Q8N141
SHLSQHKRIYTRENS	ZNF208	186	O43345
SLHLLALLLSAQKHY	TTC7B	551	Q86TV6
ALLLSAQKHYHDALN	TTC7B	556	Q86TV6
FNYRSVLDQHKRIHT	ZFP62	821	Q8NB50
DFSYSSNLKLHQVIH	ZNF227	556	Q86WZ6
KAYRHSSHLIQHQRL	ZKSCAN7	446	Q9P0L1
INHSSSRRTVKLHLY	TGM1	601	P22735
YVSFRNLTHLESLHL	TPBG	251	Q13641
HSYLRNQEHTKKQTT	TEX26	221	Q8N6G2
HISLQESYHSLKERS	TEX28	216	O15482
LFNHRSSLTNHYKIH	ZNF354A	586	O60765
QLTRHQKIHTDEKTY	ZNF529	296	Q6P280
LFSQRSSLTNHYKIH	ZNF354B	586	Q96LW1
NLYKHRRTQTHLNNS	ZNF831	186	Q5JPB2
ANNHYDKILAHSRIR	POSTN	21	Q15063
FSYNSKLIRHQRIHT	ZNF619	281	Q8N2I2
KSHSRQLQSYKSHGV	TERB1	466	Q8NA31
SLEDNKHALYQLLAH	TRRAP	976	Q9Y4A5
SLQAHQRVHSRAKSY	ZNF45	206	Q02386
SLNSIEQYHAHLKGS	ZMAT4	206	Q9H898
SRSSILTGKYVHNHN	SULF2	91	Q8IWU5
HHDKVQSLCYLQLTR	WDFY1	241	Q8IWB7
GKAYSLSSHLNRHQK	ZNF134	406	P52741
YNSSLIKHRRIHTGE	ZNF17	621	P17021
LANYLLSKEHARSCH	USP36	146	Q9P275
FSQSSSLIYHQRIHK	ZNF7	506	P17097
YRSALLSHQDIHNKV	ZKSCAN8	361	Q15776
YISKFNLDLHQRVHT	ZNF284	436	Q2VY69
RYSANLVKHQRLHTE	ZNF34	261	Q8IZ26
QLESHSFYNLSKVTH	TSHR	91	P16473
YKESSHHPLQRQLSA	ELFN2	606	Q5R3F8
TRHLYHSSQNELAKL	GOLGB1	2296	Q14789
NKSSYHRLSELVEHV	LPIN2	846	Q92539
LSQQLKSLYLGVSHH	MYO3A	1451	Q8NEV4