Cluster composition

Functions

CategoryNameIntersectionWithQueryPValueGenesInTermGenesInQueryGenesInTermInQueryID
GeneOntologyMolecularFunctionhelicase activity

DDX18 DDX54 DDX23 CHD8 SMARCAD1 DDX10

2.45e-05158736GO:0004386
GeneOntologyMolecularFunctionRNA helicase activity

DDX18 DDX54 DDX23 DDX10

1.91e-0478734GO:0003724
GeneOntologyMolecularFunctionATP-dependent activity, acting on RNA

DDX18 DDX54 DDX23 DDX10

2.11e-0480734GO:0008186
GeneOntologyMolecularFunctionhistone binding

BAZ2A SUPT6H TSPYL2 SPIN2A CHD8 SPIN2B

4.18e-04265736GO:0042393
GeneOntologyBiologicalProcessrRNA metabolic process

BRIX1 FCF1 RPL27 DDX18 RRP12 DDX54 SLFN12 EBNA1BP2 RPL7 RBM34 DDX10

2.85e-092757211GO:0016072
GeneOntologyBiologicalProcessrRNA processing

BRIX1 FCF1 RPL27 DDX18 RRP12 DDX54 EBNA1BP2 RPL7 RBM34 DDX10

7.16e-092307210GO:0006364
GeneOntologyBiologicalProcessribosome biogenesis

BRIX1 FCF1 RPL27 DDX18 RRP12 DDX54 EBNA1BP2 RPL7 RBM34 DDX10

2.52e-073367210GO:0042254
GeneOntologyBiologicalProcessribonucleoprotein complex biogenesis

BRIX1 FCF1 RPL27 DDX18 RRP12 DDX54 DDX23 EBNA1BP2 RPL7 RBM34 DDX10

1.61e-065157211GO:0022613
GeneOntologyBiologicalProcessribosomal large subunit biogenesis

BRIX1 DDX18 EBNA1BP2 RPL7 RBM34

5.62e-0673725GO:0042273
GeneOntologyBiologicalProcessmaturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)

DDX18 RPL7 RBM34

2.68e-0517723GO:0000463
GeneOntologyBiologicalProcessRNA processing

BRIX1 FCF1 RPL27 TRMT10A RBMXL3 SUPT6H DDX18 RRP12 DDX54 DDX23 CHD8 EBNA1BP2 RPL7 RBM34 IWS1 DDX10

4.72e-0515007216GO:0006396
GeneOntologyBiologicalProcessmaturation of LSU-rRNA

DDX18 RPL7 RBM34

8.88e-0525723GO:0000470
GeneOntologyBiologicalProcesschromatin remodeling

PBRM1 CEBPG BAZ2A SUPT6H TSPYL2 NSD1 DDX23 CHD8 SMARCAD1 IWS1

2.41e-047417210GO:0006338
DomainNPIP

NPIPB8 NPIPB15 NPIPB13 NPIPB9 NPIPB6 NPIPB3 NPIPB5

5.13e-1414777IPR009443
DomainHelicase_C

DDX18 DDX54 DDX23 CHD8 SMARCAD1 DDX10

5.23e-06107776PF00271
DomainHELICc

DDX18 DDX54 DDX23 CHD8 SMARCAD1 DDX10

5.23e-06107776SM00490
DomainHelicase_C

DDX18 DDX54 DDX23 CHD8 SMARCAD1 DDX10

5.52e-06108776IPR001650
DomainHELICASE_CTER

DDX18 DDX54 DDX23 CHD8 SMARCAD1 DDX10

5.83e-06109776PS51194
DomainHELICASE_ATP_BIND_1

DDX18 DDX54 DDX23 CHD8 SMARCAD1 DDX10

5.83e-06109776PS51192
DomainDEXDc

DDX18 DDX54 DDX23 CHD8 SMARCAD1 DDX10

5.83e-06109776SM00487
DomainHelicase_ATP-bd

DDX18 DDX54 DDX23 CHD8 SMARCAD1 DDX10

6.14e-06110776IPR014001
DomainDEAD_ATP_HELICASE

DDX18 DDX54 DDX23 DDX10

7.72e-0631774PS00039
DomainRNA-helicase_DEAD-box_CS

DDX18 DDX54 DDX23 DDX10

9.98e-0633774IPR000629
DomainQ_MOTIF

DDX18 DDX54 DDX23 DDX10

1.59e-0537774PS51195
DomainRNA_helicase_DEAD_Q_motif

DDX18 DDX54 DDX23 DDX10

1.59e-0537774IPR014014
DomainSPIN-2

SPIN2A SPIN2B

1.68e-052772IPR029564
DomainDUF4217

DDX18 DDX10

1.00e-044772PF13959
DomainDUF4217

DDX18 DDX10

1.00e-044772SM01178
DomainDUF4217

DDX18 DDX10

1.00e-044772IPR025313
DomainSpin-Ssty

SPIN2A SPIN2B

1.66e-045772PF02513
DomainSPIN/Ssty

SPIN2A SPIN2B

1.66e-045772IPR003671
DomainDEAD/DEAH_box_helicase_dom

DDX18 DDX54 DDX23 DDX10

2.34e-0473774IPR011545
DomainDEAD

DDX18 DDX54 DDX23 DDX10

2.34e-0473774PF00270
DomainPINc

FCF1 SWT1

2.49e-046772SM00670
DomainPIN_dom

FCF1 SWT1

2.49e-046772IPR002716
Domain-

FCF1 SWT1

1.08e-03127723.40.50.1010
DomainPIN_domain-like

FCF1 SWT1

1.48e-0314772IPR029060
DomainAT_hook

BAZ2A AHCTF1

1.94e-0316772PF02178
DomainHTH_motif

CDX4 DLX1 DLX5

2.90e-0369773IPR000047
DomainBromodomain_CS

PBRM1 BAZ2A

5.11e-0326772IPR018359
DomainAT_hook

BAZ2A AHCTF1

5.51e-0327772SM00384
DomainAT_hook_DNA-bd_motif

BAZ2A AHCTF1

5.51e-0327772IPR017956
DomainHomeobox_metazoa

CDX4 DLX1 DLX5

6.12e-0390773IPR020479
DomainHMGI/Y_DNA-bd_CS

BAZ2A AHCTF1

7.22e-0331772IPR000637
DomainSNF2_N

CHD8 SMARCAD1

7.68e-0332772IPR000330
DomainSNF2_N

CHD8 SMARCAD1

7.68e-0332772PF00176
PathwayREACTOME_MAJOR_PATHWAY_OF_RRNA_PROCESSING_IN_THE_NUCLEOLUS_AND_CYTOSOL

FCF1 RPL27 RPL29 EBNA1BP2 TEX10 RPL7

3.97e-05180506MM15324
PathwayREACTOME_RRNA_PROCESSING

FCF1 RPL27 RPL29 EBNA1BP2 TEX10 RPL7

8.20e-05205506M27685
Pubmed

The ubiquitin-specific protease USP36 SUMOylates EXOSC10 and promotes the nucleolar RNA exosome function in rRNA processing.

BRIX1 FCF1 RPL27 RPL29 PBRM1 CCDC137 DDX18 RRP12 DDX54 SPIN2A LLPH EBNA1BP2 TEX10 RPL7 RBM34 DDX10

4.89e-14483851636912080
Pubmed

Interactions of the Antiviral Factor Interferon Gamma-Inducible Protein 16 (IFI16) Mediate Immune Signaling and Herpes Simplex Virus-1 Immunosuppression.

BRIX1 FCF1 PBRM1 CCDC137 BAZ2A AHCTF1 DDX18 RRP12 DDX54 EBNA1BP2 TEX10 RBM34 DDX10

1.72e-12332851325693804
Pubmed

Functional proteomics establishes the interaction of SIRT7 with chromatin remodeling complexes and expands its role in regulation of RNA polymerase I transcription.

BRIX1 PBRM1 BAZ2A SUPT6H AHCTF1 DDX18 RRP12 DDX54 NSD1 DDX23 CHD8 EBNA1BP2 TEX10 RPL7 RBM34 DDX10

4.72e-12653851622586326
Pubmed

CHD3 and CHD4 form distinct NuRD complexes with different yet overlapping functionality.

BRIX1 RPL27 PBRM1 CCDC137 SUPT6H DDX18 RRP12 DDX54 DDX23 EBNA1BP2 RPL7 RBM34 IWS1 DDX10

2.45e-10605851428977666
Pubmed

H4K20me0 recognition by BRCA1-BARD1 directs homologous recombination to sister chromatids.

BRIX1 RPL27 RPL29 PBRM1 CEBPG TBRG1 BAZ2A SUPT6H AHCTF1 DDX18 RRP12 DDX54 NSD1 DDX23 LLPH ELF2 EBNA1BP2 RPL7 IWS1

2.52e-101294851930804502
Pubmed

The in vivo Interaction Landscape of Histones H3.1 and H3.3.

PBRM1 BAZ2A AHCTF1 DDX54 NSD1 SGO2 ELF2 CHD8 SMARCAD1 EBNA1BP2 RBM34 ZNF292 IWS1 DDX10

2.61e-10608851436089195
Pubmed

The histone acetyltransferase KAT6A is recruited to unmethylated CpG islands via a DNA binding winged helix domain.

BRIX1 RPL27 RPL29 PBRM1 CCDC137 RRP12 DDX54 LLPH EBNA1BP2 TEX10 RPL7 RBM34

4.51e-10417851236537216
Pubmed

The E3 ubiquitin ligase HECTD1 contributes to cell proliferation through an effect on mitosis.

BRIX1 RPL27 PBRM1 CCDC137 PIK3C3 DDX18 RRP12 DDX54 SCAPER SGO2 EBNA1BP2 TEX10 RPL7 RBM34 DDX10

4.62e-10759851535915203
Pubmed

The functional interactome of PYHIN immune regulators reveals IFIX is a sensor of viral DNA.

BRIX1 CCDC137 BAZ2A DDX18 RRP12 DDX54 LLPH EBNA1BP2 TEX10 RBM34 DDX10

9.77e-10349851125665578
Pubmed

The mRNA-bound proteome and its global occupancy profile on protein-coding transcripts.

BRIX1 RPL27 RPL29 MRPL21 CCDC137 SUPT6H DDX18 RRP12 DDX54 DDX23 LLPH EBNA1BP2 RPL7 RBM34 DDX10

1.07e-09807851522681889
Pubmed

Characterizing ZC3H18, a Multi-domain Protein at the Interface of RNA Production and Destruction Decisions.

BRIX1 RPL27 RPL29 CCDC137 DDX18 RRP12 DDX54 DDX23 LLPH EBNA1BP2 TEX10 RPL7 RBM34 DDX10

2.79e-09731851429298432
Pubmed

TBK1 phosphorylation activates LIR-dependent degradation of the inflammation repressor TNIP1.

BRIX1 FCF1 RPL27 RPL29 CCDC137 AHCTF1 DDX18 RRP12 DDX54 DDX23 LLPH EBNA1BP2 TEX10 RPL7 DDX10

9.41e-09949851536574265
Pubmed

BAP1 regulation of the key adaptor protein NCoR1 is critical for γ-globin gene repression.

BRIX1 FCF1 RPL27 RPL29 PBRM1 BAZ2A AHCTF1 DDX18 RRP12 DDX54 DDX23 LLPH CHD8 EBNA1BP2 RPL7 RBM34 DDX10

1.73e-081318851730463901
Pubmed

Combinatorial targeting of a chromatin complex comprising Dot1L, menin and the tyrosine kinase BAZ1B reveals a new therapeutic vulnerability of endocrine therapy-resistant breast cancer.

RPL27 RPL29 PBRM1 CCDC137 AHCTF1 DDX18 RRP12 TSPYL2 DDX54 LLPH EBNA1BP2 TEX10 RPL7 RBM34

1.78e-08847851435850772
Pubmed

RNA-binding proteins with basic-acidic dipeptide (BAD) domains self-assemble and aggregate in Alzheimer's disease.

BRIX1 RPL27 RPL29 MRPL21 CCDC137 DDX18 RRP12 DDX54 DDX23 EBNA1BP2 TEX10 RPL7 RBM34

1.93e-08713851329802200
Pubmed

The Nse5/6-like SIMC1-SLF2 complex localizes SMC5/6 to viral replication centers.

RPL27 CCDC137 BAZ2A AHCTF1 DDX18 SERF2 NSD1 SYT1 SGO2 ELF2 CHD8 DLX1 EBNA1BP2 DDX10

7.75e-08954851436373674
Pubmed

ZBTB2 protein is a new partner of the Nucleosome Remodeling and Deacetylase (NuRD) complex.

BRIX1 PBRM1 BAZ2A DDX18 RRP12 DDX54 EBNA1BP2 TEX10 DDX10

1.22e-0733085933301849
Pubmed

Reciprocal interaction between SIRT6 and APC/C regulates genomic stability.

BRIX1 PBRM1 SUPT6H DDX18 RRP12 TSPYL2 DDX54 SGO2 CHD8 TEX10

1.27e-07440851034244565
Pubmed

Proteomic profiling of VCP substrates links VCP to K6-linked ubiquitylation and c-Myc function.

RPL27 RPL29 BAZ2A AHCTF1 DDX18 RRP12 DDX54 DDX23 CHD8 SMARCAD1 EBNA1BP2 PRR11 TEX10 RPL7 RBM34 DDX10

1.58e-071353851629467282
Pubmed

SETD1A Methyltransferase Is Physically and Functionally Linked to the DNA Damage Repair Protein RAD18.

BRIX1 SUPT6H DDX54 DDX23 ELF2 CHD8 EBNA1BP2 IWS1

1.96e-0725185831076518
Pubmed

Human Antiviral Protein IFIX Suppresses Viral Gene Expression during Herpes Simplex Virus 1 (HSV-1) Infection and Is Counteracted by Virus-induced Proteasomal Degradation.

BRIX1 RPL29 BAZ2A SUPT6H RRP12 LLPH TEX10 RPL7

1.96e-0725185828077445
Pubmed

The multi-subunit GID/CTLH E3 ubiquitin ligase promotes cell proliferation and targets the transcription factor Hbp1 for degradation.

BRIX1 PBRM1 SUPT6H RRP12 DDX54 EBNA1BP2 TEX10 RBM34

2.08e-0725385829911972
Pubmed

SNIP1 Recruits TET2 to Regulate c-MYC Target Genes and Cellular DNA Damage Response.

RPL27 RPL29 AHCTF1 RRP12 DDX54 EBNA1BP2 RPL7 DDX10

2.49e-0725985830404004
Pubmed

TWIST1 and chromatin regulatory proteins interact to guide neural crest cell differentiation.

RPL29 PBRM1 NSD1 ELF2 CHD8 EBNA1BP2

2.95e-0710985633554859
Pubmed

KAP1 Recruitment of the 7SK snRNP Complex to Promoters Enables Transcription Elongation by RNA Polymerase II.

BRIX1 RPL27 RPL29 MRPL21 DDX18 DDX54 DDX23 EBNA1BP2

4.62e-0728185826725010
Pubmed

Comprehensive interactome profiling of the human Hsp70 network highlights functional differentiation of J domains.

BRIX1 RPL27 MRPL21 BAZ2A SUPT6H AHCTF1 DDX18 RRP12 DDX54 DDX23 SMARCAD1 EBNA1BP2 PRR11 RPL7 RBM34 DDX10

5.57e-071487851633957083
Pubmed

SMYD3 Impedes Small Cell Lung Cancer Sensitivity to Alkylation Damage through RNF113A Methylation-Phosphorylation Cross-talk.

BRIX1 RPL27 RPL29 DDX18 RRP12 DDX54 DDX23 LLPH EBNA1BP2 RPL7 RBM34

5.87e-07655851135819319
Pubmed

Directed proteomic analysis of the human nucleolus.

BRIX1 RPL27 RRP12 DDX54 EBNA1BP2 RPL7 DDX10

8.23e-0720885711790298
Pubmed

Nucleolar proteome dynamics.

FCF1 RPL27 RPL29 RRP12 DDX54 DDX23 RPL7 RBM34 DDX10

9.01e-0741985915635413
Pubmed

STING-Mediated IFI16 Degradation Negatively Controls Type I Interferon Production.

BRIX1 DDX18 DDX54 DDX23 EBNA1BP2 RPL7 RBM34 DDX10

1.12e-0631685831665637
Pubmed

Genomic Resolution of DLX-Orchestrated Transcriptional Circuits Driving Development of Forebrain GABAergic Neurons.

DLX1 DLX5 ARL4D

1.67e-061085331433982
Pubmed

HIV-1 Vpr induces cell cycle arrest and enhances viral gene expression by depleting CCDC137.

CCDC137 RRP12 SGO2 EBNA1BP2 TEX10 DDX10

1.78e-0614885632538781
Pubmed

DEAD-box helicase DDX27 regulates 3' end formation of ribosomal 47S RNA and stably associates with the PeBoW-complex.

BRIX1 DDX18 RRP12 EBNA1BP2

2.56e-063985425825154
Pubmed

Ubiquitin-Independent Disassembly by a p97 AAA-ATPase Complex Drives PP1 Holoenzyme Formation.

BRIX1 RPL27 RPL29 SUPT6H AHCTF1 EBNA1BP2 RPL7 RBM34

2.99e-0636185830344098
Pubmed

Distinct nuclear and cytoplasmic assemblies and interactomes of the mammalian CTLH E3 ligase complex.

BRIX1 CCDC137 DDX18 DDX54 EBNA1BP2 RBM34

3.58e-0616785635833506
Pubmed

Beads-free protein immunoprecipitation for a mass spectrometry-based interactome and posttranslational modifications analysis.

BRIX1 RPL29 DDX18 RRP12 EBNA1BP2 RPL7

4.24e-0617285626336360
Pubmed

MYC multimers shield stalled replication forks from RNA polymerase.

BRIX1 RPL27 RPL29 SUPT6H DDX18 RRP12 DDX54 DDX23 EBNA1BP2 TEX10 RPL7 DDX10

5.11e-06989851236424410
Pubmed

A Genome-wide ER-phagy Screen Highlights Key Roles of Mitochondrial Metabolism and ER-Resident UFMylation.

BRIX1 FCF1 RRP12 TEX10

5.47e-064785432160526
Pubmed

HDLBP Promotes Hepatocellular Carcinoma Proliferation and Sorafenib Resistance by Suppressing Trim71-dependent RAF1 Degradation.

BRIX1 FCF1 PBRM1 RBMXL3 AHCTF1 DDX18 DDX23 LLPH EBNA1BP2 PRR11 TEX10 RPL7 RBM34 DDX10

5.68e-061371851436244648
Pubmed

WDR76 Co-Localizes with Heterochromatin Related Proteins and Rapidly Responds to DNA Damage.

BRIX1 PBRM1 DDX18 RRP12 DDX54 DDX23 CHD8 EBNA1BP2

5.69e-0639485827248496
Pubmed

Genetic ablation of interacting with Spt6 (Iws1) causes early embryonic lethality.

SUPT6H IWS1

5.90e-06285230208029
Pubmed

Functional cloning of SPIN-2, a nuclear anti-apoptotic protein with roles in cell cycle progression.

SPIN2A SPIN2B

5.90e-06285212145692
Pubmed

Regulatory roles of conserved intergenic domains in vertebrate Dlx bigene clusters.

DLX1 DLX5

5.90e-06285212670995
Pubmed

The cellular modifier MOAG-4/SERF drives amyloid formation through charge complementation.

SERF2 SERF1A

5.90e-06285234617299
Pubmed

PTPN14 regulates Roquin2 stability by tyrosine dephosphorylation.

BRIX1 RPL27 RPL29 CCDC137 DDX18 RRP12 DDX54 EBNA1BP2 RPL7 RBM34

6.24e-06678851030209976
Pubmed

Structural basis and specificity of human otubain 1-mediated deubiquitination.

DDX54 DDX23 EBNA1BP2

6.28e-061585318954305
Pubmed

Interactome Rewiring Following Pharmacological Targeting of BET Bromodomains.

BRIX1 PBRM1 DDX18 RRP12 NSD1 DDX23 CHD8 TEX10 DDX10

6.39e-0653385930554943
Pubmed

Identifying biological pathways that underlie primordial short stature using network analysis.

BRIX1 RPL29 PBRM1 SUPT6H DDX18 RRP12 DDX54 DDX23 EBNA1BP2 TEX10 RPL7 DDX10

7.26e-061024851224711643
Pubmed

Gain of Additional BIRC3 Protein Functions through 3'-UTR-Mediated Protein Complex Formation.

BRIX1 RPL27 RPL29 PBRM1 SUPT6H DDX18 RRP12 DDX54 SGO2 SMARCAD1 EBNA1BP2 RPL7 RBM34 DDX10

8.80e-061425851430948266
Pubmed

The protein composition of mitotic chromosomes determined using multiclassifier combinatorial proteomics.

CCDC137 DDX18 LLPH

9.35e-061785320813266
Pubmed

Protein array based interactome analysis of amyloid-β indicates an inhibition of protein translation.

FCF1 DDX18 DDX54 LLPH RBM34 ARL4D DDX10

1.02e-0530585721244100
Pubmed

Arginine methylation of SARS-Cov-2 nucleocapsid protein regulates RNA binding, its ability to suppress stress granule formation, and viral replication.

BRIX1 RPL27 DDX54 EBNA1BP2 RPL7

1.23e-0512185534029587
Pubmed

Targeted and Interactome Proteomics Revealed the Role of PHD2 in Regulating BRD4 Proline Hydroxylation.

BRIX1 RPL27 RPL29 AHCTF1 DDX23 EBNA1BP2 RPL7 DDX10

1.29e-0544185831239290
Pubmed

A catalogue of putative HIV-1 protease host cell substrates.

DDX18 SPIN2A EBNA1BP2 RPL7 ZNF292

1.39e-0512485522944692
Pubmed

The deubiquitinase USP7 stabilizes Maf proteins to promote myeloma cell survival.

BRIX1 DDX18 RRP12 EBNA1BP2 RPL7 RBM34

1.73e-0522085631822558
Pubmed

Identification of a direct Dlx homeodomain target in the developing mouse forebrain and retina by optimization of chromatin immunoprecipitation.

DLX1 DLX5

1.77e-05385214769946
Pubmed

Divergent origins and concerted expansion of two segmental duplications on chromosome 16.

NPIPB3 NPIPB5

1.77e-05385211948212
Pubmed

The integrase cofactor LEDGF/p75 associates with Iws1 and Spt6 for postintegration silencing of HIV-1 gene expression in latently infected cells.

SUPT6H IWS1

1.77e-05385225590759
Pubmed

Patterns and rates of exonic de novo mutations in autism spectrum disorders.

CHD8 ZNF292

1.77e-05385222495311
Pubmed

Identification of MOAG-4/SERF as a regulator of age-related proteotoxicity.

SERF2 SERF1A

1.77e-05385220723760
Pubmed

Cloning a pseudogene and cDNA encoding a 17-kDa ribosomal protein from mouse: structure and regulation of expression.

RPL29 RPL7

1.77e-0538528224911
Pubmed

Transferrin Receptor Protein 1 Cooperates with mGluR2 To Mediate the Internalization of Rabies Virus and SARS-CoV-2.

BRIX1 CCDC137 RRP12 DDX54 EBNA1BP2 TEX10 RPL7

1.80e-0533385736779763
Pubmed

WWP2 ubiquitylates RNA polymerase II for DNA-PK-dependent transcription arrest and repair at DNA breaks.

RPL27 RPL29 CCDC137 SUPT6H DDX18 RRP12 EBNA1BP2 RPL7 RBM34

1.99e-0561585931048545
Pubmed

Menin and Menin-Associated Proteins Coregulate Cancer Energy Metabolism.

BAZ2A DDX54 DDX23 CHD8 SMARCAD1 TUBGCP2 DDX10

2.10e-0534185732971831
Pubmed

Suppression of ACE2 SUMOylation protects against SARS-CoV-2 infection through TOLLIP-mediated selective autophagy.

RPL27 RPL29 DDX18 RRP12 DDX54 EBNA1BP2 SLC4A5 RPL7 RBM34

2.75e-0564185936057605
Pubmed

Nuclear Functions of Nucleolin through Global Proteomics and Interactomic Approaches.

BRIX1 RPL27 DDX18 EBNA1BP2 RPL7

2.95e-0514585527049334
Pubmed

Proteomic characterization of chromosomal common fragile site (CFS)-associated proteins uncovers ATRX as a regulator of CFS stability.

BRIX1 RPL27 RPL29 DDX18 RRP12 DDX23 SGO2 TEX10 RPL7

3.14e-0565285931180492
Pubmed

DLX-1, DLX-2, and DLX-5 expression define distinct stages of basal forebrain differentiation.

DLX1 DLX5

3.53e-05485210516593
Pubmed

The Iws1:Spt6:CTD complex controls cotranscriptional mRNA biosynthesis and HYPB/Setd2-mediated histone H3K36 methylation.

SUPT6H IWS1

3.53e-05485219141475
Pubmed

Posterior axis formation requires Dlx5/Dlx6 expression at the neural plate border.

DLX5 TNNT3

3.53e-05485230889190
Pubmed

Comparison of the positional cloning methods used to isolate the BRCA1 gene.

RPL27 ARL4D

3.53e-0548527581362
Pubmed

Cloning and characterization of two members of the vertebrate Dlx gene family.

DLX1 DLX5

3.53e-0548527907794
Pubmed

A highly conserved enhancer in the Dlx5/Dlx6 intergenic region is the site of cross-regulatory interactions between Dlx genes in the embryonic forebrain.

DLX1 DLX5

3.53e-05485210632600
Pubmed

Deletion of SERF2 in mice delays embryonic development and alters amyloid deposit structure in the brain.

SERF2 SERF1A

3.53e-05485237130781
Pubmed

Dlx genes encode DNA-binding proteins that are expressed in an overlapping and sequential pattern during basal ganglia differentiation.

DLX1 DLX5

3.53e-0548529415433
Pubmed

Human transcription factor protein interaction networks.

BRIX1 MRPL21 PBRM1 DDX18 RRP12 DDX54 LLPH ELF2 CHD8 EBNA1BP2 TEX10 RBM34 DDX10

4.24e-051429851335140242
Pubmed

Interactome Analysis of the Nucleocapsid Protein of SARS-CoV-2 Virus.

CCDC137 DDX18 DDX54 LLPH EBNA1BP2

4.58e-0515985534578187
Pubmed

Targeting USP10 induces degradation of oncogenic ANLN in esophageal squamous cell carcinoma.

BRIX1 RPL27 RPL29 AHCTF1 DDX18 RRP12 DDX54 EBNA1BP2 TUBGCP2 TEX10 RPL7 RBM34

5.44e-051257851236526897
Pubmed

Iws1 and Spt6 Regulate Trimethylation of Histone H3 on Lysine 36 through Akt Signaling and are Essential for Mouse Embryonic Genome Activation.

SUPT6H IWS1

5.87e-05585230846735
Pubmed

The evolution of the vertebrate Dlx gene family.

DLX1 DLX5

5.87e-0558528855272
Pubmed

Ectopic expression of the Dlx genes induces glutamic acid decarboxylase and Dlx expression.

DLX1 DLX5

5.87e-05585211782417
Pubmed

Role of the Dlx homeobox genes in proximodistal patterning of the branchial arches: mutations of Dlx-1, Dlx-2, and Dlx-1 and -2 alter morphogenesis of proximal skeletal and soft tissue structures derived from the first and second arches.

DLX1 DLX5

5.87e-0558529187081
Pubmed

Identification of a candidate modifying gene for spinal muscular atrophy by comparative genomics.

SERF2 SERF1A

5.87e-0558529731538
Pubmed

The cell proliferation antigen Ki-67 organises heterochromatin.

BRIX1 RPL29 CCDC137 BAZ2A DDX54 CHD8 RBM34

6.73e-0541085726949251
Pubmed

The RNA-mediated estrogen receptor α interactome of hormone-dependent human breast cancer cell nuclei.

PBRM1 CCDC137 BAZ2A SUPT6H AHCTF1 RRP12 NSD1 LLPH CHD8 PRR11 TEX10 IWS1 DDX10

6.80e-051497851331527615
Pubmed

The sequence and analysis of duplication-rich human chromosome 16.

NPIPB8 NPIPB9 NPIPB11 NPIPB3

7.23e-059085415616553
Pubmed

Systematic bromodomain protein screens identify homologous recombination and R-loop suppression pathways involved in genome integrity.

PBRM1 BAZ2A AHCTF1 DDX18 TSPYL2 SCAPER APBA2 CHD8 SMARCAD1 EBNA1BP2 TUBGCP2

8.61e-051116851131753913
Pubmed

Identification and characterization of a novel transcript down-regulated in Dlx1/Dlx2 and up-regulated in Pax6 mutant telencephalon.

DLX1 DLX5

8.80e-05685215376329
Pubmed

Expression of Dlx genes during the development of the murine dentition.

DLX1 DLX5

8.80e-05685211180832
Pubmed

A transcriptional coregulator, SPIN·DOC, attenuates the coactivator activity of Spindlin1.

SPIN2A SPIN2B

8.80e-05685229061846
Pubmed

Differential expression of orthologous Dlx genes in zebrafish and mice: implications for the evolution of the Dlx homeobox gene family.

DLX1 DLX5

8.80e-05685211069141
Pubmed

Evf2 (Dlx6as) lncRNA regulates ultraconserved enhancer methylation and the differential transcriptional control of adjacent genes.

DLX1 DLX5

8.80e-05685224089468
Pubmed

Developmental regulation of gonadotropin-releasing hormone gene expression by the MSX and DLX homeodomain protein families.

DLX1 DLX5

8.80e-05685215743757
Pubmed

Jaw transformation with gain of symmetry after Dlx5/Dlx6 inactivation: mirror of the past?

DLX1 DLX5

8.80e-05685212434331
Pubmed

TRIM28-mediated nucleocapsid protein SUMOylation enhances SARS-CoV-2 virulence.

BRIX1 RPL27 RPL29 DDX18 EBNA1BP2 RPL7 DDX10

9.06e-0543085738172120
Pubmed

Cell cycle-dependent phosphorylation regulates RECQL4 pathway choice and ubiquitination in DNA double-strand break repair.

BRIX1 RPL27 RPL29 MRPL21 CCDC137 WDR87 RRP12 APBA2 ANKRD30B EBNA1BP2 RPL7 RBM34

9.63e-051335851229229926
Pubmed

R2TP/Prefoldin-like component RUVBL1/RUVBL2 directly interacts with ZNHIT2 to regulate assembly of U5 small nuclear ribonucleoprotein.

RPL27 RRP12 DDX23 TUBGCP2 RPL7 IWS1

9.68e-0530085628561026
Pubmed

Delineating the HMGB1 and HMGB2 interactome in prostate and ovary epithelial cells and its relationship with cancer.

RPL27 RPL29 SUPT6H RPL7 IWS1

1.01e-0418885529721183
Pubmed

Transcription-coupled nucleotide excision repair is coordinated by ubiquitin and SUMO in response to ultraviolet irradiation.

MRPL21 ZBTB38 SUPT6H IWS1

1.18e-0410285431722399
Pubmed

In vitro nuclear interactome of the HIV-1 Tat protein.

BRIX1 PBRM1 AHCTF1 DDX18 CHD8

1.20e-0419585519454010
InteractionUSP36 interactions

BRIX1 FCF1 RPL27 RPL29 PBRM1 CCDC137 ZNF330 DDX18 RRP12 DDX54 SPIN2A DDX23 LLPH EBNA1BP2 TEX10 RPL7 RBM34 ARL4D DDX10 CEP63

1.83e-135998120int:USP36
InteractionCOIL interactions

BRIX1 PBRM1 ZNF330 SUPT6H DDX18 RRP12 TSPYL2 DDX54 NSD1 DDX23 SGO2 ELF2 CHD8 SMARCAD1 TEX10 RBM34 ARL4D ZNF292

5.28e-125528118int:COIL
InteractionPOLR1G interactions

BRIX1 PBRM1 SUPT6H DDX18 RRP12 DDX54 NSD1 SGO2 ELF2 CHD8 SMARCAD1 EBNA1BP2 TEX10 RBM34 ZNF292 IWS1 DDX10

8.17e-124898117int:POLR1G
InteractionZNF330 interactions

PBRM1 CCDC137 ZNF330 SUPT6H DDX18 RRP12 DDX54 NSD1 ELF2 SMARCAD1 EBNA1BP2 TEX10 RBM34 ZNF292 IWS1 DDX10

2.28e-114468116int:ZNF330
InteractionNOP53 interactions

BRIX1 CCDC137 ZNF330 RRP12 TSPYL2 DDX54 DDX23 EBNA1BP2 PRR11 RPL7 RBM34 ARL4D DDX10

1.25e-102888113int:NOP53
InteractionRPL4 interactions

BRIX1 FCF1 RPL27 RPL29 CCDC137 DDX18 RRP12 TSPYL2 DDX54 NSD1 LLPH SMARCAD1 EBNA1BP2 PRR11 TEX10 RPL7 RBM34 ARL4D DDX10

1.32e-107648119int:RPL4
InteractionRPL31 interactions

BRIX1 FCF1 RPL27 RPL29 CCDC137 BAZ2A SUPT6H DDX18 RRP12 DDX54 NSD1 LLPH EBNA1BP2 TEX10 RPL7 RBM34 IWS1 DDX10

1.61e-106808118int:RPL31
InteractionNPM1 interactions

BRIX1 RPL27 RPL29 MRPL21 PBRM1 CCDC137 ZNF330 WDR87 AHCTF1 DDX18 RRP12 DDX54 NSD1 DDX23 CHD8 EBNA1BP2 TEX10 RPL7 RBM34 ARL4D DDX10 CEP63

1.18e-0912018122int:NPM1
InteractionSURF6 interactions

PLEKHG4B FCF1 CCDC137 ZNF330 DDX18 RRP12 DDX54 DDX23 LLPH EBNA1BP2 PRR11 RPL7 RBM34 ARL4D

1.45e-094268114int:SURF6
InteractionMNDA interactions

BRIX1 CCDC137 DDX18 RRP12 DDX54 LLPH EBNA1BP2 TEX10 RBM34 DDX10

4.16e-091888110int:MNDA
InteractionSIRT7 interactions

BRIX1 PBRM1 BAZ2A SUPT6H AHCTF1 DDX18 RRP12 SERF2 DDX54 NSD1 DDX23 CHD8 EBNA1BP2 TEX10 RPL7 RBM34 DDX10

5.16e-097448117int:SIRT7
InteractionPUM3 interactions

BRIX1 RPL27 CCDC137 ZNF330 DDX18 DDX23 LLPH EBNA1BP2 PRR11 RBM34 DDX10

5.72e-092548111int:PUM3
InteractionFGFBP1 interactions

BRIX1 FCF1 PBRM1 CCDC137 AHCTF1 DDX18 RRP12 DDX54 TEX10 RBM34 DDX10

6.46e-092578111int:FGFBP1
InteractionPRKRA interactions

BRIX1 FCF1 RPL27 CCDC137 DDX18 TSPYL2 DDX54 LLPH EBNA1BP2 PRR11 RPL7 RBM34 DDX10

6.76e-094008113int:PRKRA
InteractionADARB1 interactions

BRIX1 RPL27 RPL29 PBRM1 CCDC137 AHCTF1 RRP12 DDX54 LLPH CHD8 EBNA1BP2 RPL7 RBM34 DDX10

8.40e-094898114int:ADARB1
InteractionH3C3 interactions

PBRM1 BAZ2A SUPT6H AHCTF1 DDX54 NSD1 SGO2 ELF2 CHD8 SMARCAD1 EBNA1BP2 RBM34 ZNF292 IWS1

9.80e-094958114int:H3C3
InteractionNEIL1 interactions

BRIX1 MRPL21 CCDC137 DDX18 RRP12 DDX54 EBNA1BP2 TEX10 RPL7 RBM34 DDX10

1.35e-082768111int:NEIL1
InteractionH3C1 interactions

BRIX1 RPL29 PIEZO2 PBRM1 BAZ2A WDR87 AHCTF1 DDX18 RRP12 TSPYL2 DDX54 NSD1 ELF2 CHD8 EBNA1BP2 RBM34 ZNF292 DDX10

1.37e-089018118int:H3C1
InteractionMAGEB2 interactions

BRIX1 FCF1 RPL27 CCDC137 DDX18 DDX54 NSD1 EBNA1BP2 TEX10 RPL7 RBM34 DDX10

1.46e-083498112int:MAGEB2
InteractionPOLR1E interactions

PBRM1 DDX18 RRP12 DDX54 NSD1 SGO2 CHD8 SMARCAD1 EBNA1BP2 TEX10 RBM34 ZNF292

1.51e-083508112int:POLR1E
InteractionNIFK interactions

BRIX1 CCDC137 ZNF330 DDX18 RRP12 DDX54 NSD1 DDX23 EBNA1BP2 TEX10 RPL7 RBM34 DDX10

1.64e-084318113int:NIFK
InteractionIFI16 interactions

BRIX1 FCF1 PBRM1 CCDC137 BAZ2A AHCTF1 DDX18 RRP12 DDX54 DDX23 LLPH EBNA1BP2 TEX10 RPL7 RBM34 DDX10

2.05e-087148116int:IFI16
InteractionRPL18A interactions

BRIX1 RPL27 RPL29 CCDC137 DDX18 TSPYL2 DDX54 EBNA1BP2 PRR11 TEX10 RPL7 RBM34 DDX10

2.52e-084478113int:RPL18A
InteractionGPATCH4 interactions

BRIX1 FCF1 CCDC137 ZNF330 RRP12 DDX23 EBNA1BP2 PRR11 RBM34 ARL4D

3.10e-082328110int:GPATCH4
InteractionBRIX1 interactions

BRIX1 RPL27 CCDC137 DDX18 RRP12 DDX23 LLPH EBNA1BP2 PRR11 RPL7 RBM34

3.18e-083008111int:BRIX1
InteractionZNF346 interactions

BRIX1 RPL27 MRPL21 CCDC137 DDX18 RRP12 DDX54 LLPH EBNA1BP2 RPL7 RBM34 DDX10

3.42e-083778112int:ZNF346
InteractionCENPA interactions

PBRM1 BAZ2A DDX18 RRP12 DDX54 NSD1 SGO2 ELF2 EBNA1BP2 TEX10 RBM34 ZNF292

3.42e-083778112int:CENPA
InteractionDDX56 interactions

BRIX1 RPL27 RPL29 CCDC137 ZNF330 DDX18 RRP12 DDX23 EBNA1BP2 RBM34 DDX10

3.65e-083048111int:DDX56
InteractionMYBBP1A interactions

BRIX1 RPL27 ZBTB38 CCDC137 ZNF330 DDX54 DDX23 EBNA1BP2 PRR11 WDFY4 RPL7 RBM34 ARL4D

3.81e-084638113int:MYBBP1A
InteractionCHD3 interactions

BRIX1 RPL27 RPL29 PBRM1 CCDC137 ZNF330 SUPT6H DDX18 RRP12 SERF2 DDX54 DDX23 EBNA1BP2 RPL7 RBM34 DDX10

4.61e-087578116int:CHD3
InteractionNOC3L interactions

BRIX1 CCDC137 ZNF330 RRP12 DDX54 DDX23 EBNA1BP2 PRR11 RBM34 ARL4D

4.98e-082448110int:NOC3L
InteractionNOP56 interactions

BRIX1 CCDC137 ZNF330 DDX18 RRP12 DDX54 NSD1 DDX23 EBNA1BP2 TEX10 RPL7 RBM34 DDX10 CEP63

5.71e-085708114int:NOP56
InteractionZC3H18 interactions

BRIX1 RPL27 RPL29 CCDC137 ZNF330 DDX18 RRP12 TSPYL2 DDX54 DDX23 LLPH SMARCAD1 EBNA1BP2 TEX10 RPL7 RBM34 DDX10

5.76e-088778117int:ZC3H18
InteractionH2BC8 interactions

PBRM1 BAZ2A AHCTF1 NSD1 SGO2 ELF2 CHD8 SMARCAD1 EBNA1BP2 TEX10 RBM34 ZNF292 IWS1 DDX10

6.50e-085768114int:H2BC8
InteractionEBNA1BP2 interactions

BRIX1 RPL27 CCDC137 ZNF330 DDX18 DDX23 EBNA1BP2 PRR11 RPL7 RBM34 ARL4D

6.97e-083248111int:EBNA1BP2
InteractionREXO4 interactions

CCDC137 ZNF330 DDX18 RRP12 DDX23 LLPH EBNA1BP2 PRR11 RBM34 ARL4D

9.36e-082618110int:REXO4
InteractionRPL36 interactions

BRIX1 RPL27 RPL29 CCDC137 DDX18 TSPYL2 DDX54 NSD1 EBNA1BP2 TEX10 RPL7 RBM34 DDX10

1.02e-075048113int:RPL36
InteractionMEN1 interactions

RPL27 RPL29 PBRM1 CCDC137 BAZ2A AHCTF1 DDX18 RRP12 DDX54 DDX23 LLPH CHD8 SMARCAD1 EBNA1BP2 TUBGCP2 TEX10 RBM34 DDX10

1.03e-0710298118int:MEN1
InteractionRPL13 interactions

BRIX1 FCF1 RPL27 RPL29 CCDC137 DDX18 RRP12 TSPYL2 DDX54 LLPH EBNA1BP2 TEX10 RPL7 RBM34 DDX10

1.08e-077008115int:RPL13
InteractionRRS1 interactions

BRIX1 RPL27 RPL29 CCDC137 ZNF330 DDX18 DDX23 EBNA1BP2 PRR11 RPL7 RBM34

1.31e-073458111int:RRS1
InteractionRPL3 interactions

BRIX1 RPL27 PBRM1 CCDC137 DDX18 RRP12 DDX54 LLPH EBNA1BP2 PRR11 TEX10 RPL7 RBM34 ARL4D DDX10

1.61e-077228115int:RPL3
InteractionNUP43 interactions

PBRM1 BAZ2A SUPT6H AHCTF1 DDX18 TSPYL2 NSD1 ELF2 CHD8 SMARCAD1 EBNA1BP2 TEX10 ZNF292 IWS1

1.77e-076258114int:NUP43
InteractionRPL15 interactions

BRIX1 RPL27 ZBTB38 RRP12 TSPYL2 DDX54 LLPH EBNA1BP2 PRR11 TEX10 RPL7 RBM34 DDX10

1.82e-075308113int:RPL15
InteractionNOL12 interactions

BRIX1 CCDC137 TSPYL2 DDX54 EBNA1BP2 PRR11 RBM34 DDX10

1.85e-07153818int:NOL12
InteractionNOC2L interactions

RPL27 ZBTB38 CCDC137 ZNF330 DDX18 RRP12 DDX54 DDX23 EBNA1BP2 RBM34

1.92e-072828110int:NOC2L
InteractionRBM34 interactions

BRIX1 CCDC137 ZNF330 DDX54 DDX23 LLPH EBNA1BP2 PRR11 RBM34 DDX10

2.49e-072908110int:RBM34
InteractionRBM19 interactions

ZNF330 RRP12 DDX54 DDX23 LLPH EBNA1BP2 RPL7 ARL4D DDX10

2.56e-07221819int:RBM19
InteractionLYAR interactions

BRIX1 PLEKHG4B CCDC137 ZNF330 DDX18 DDX54 DDX23 EBNA1BP2 PRR11 RBM34 DDX10

2.87e-073738111int:LYAR
InteractionRPL11 interactions

BRIX1 FCF1 RPL27 RPL29 PBRM1 CCDC137 DDX18 DDX54 LLPH EBNA1BP2 TUBGCP2 RPL7 RBM34 DDX10

2.95e-076528114int:RPL11
InteractionZNF668 interactions

CCDC137 DDX18 RRP12 DDX54 PRR11 TEX10 RPL7 RBM34 DDX10

3.10e-07226819int:ZNF668
InteractionKRR1 interactions

BRIX1 CCDC137 DDX18 RRP12 DDX54 LLPH EBNA1BP2 PRR11 RPL7 RBM34 DDX10

3.36e-073798111int:KRR1
InteractionRPLP0 interactions

BRIX1 RPL27 RPL29 PBRM1 CCDC137 DDX18 TSPYL2 DDX54 LLPH EBNA1BP2 TEX10 RPL7 RBM34 DDX10

3.42e-076608114int:RPLP0
InteractionRSL1D1 interactions

BRIX1 CCDC137 ZNF330 DDX18 RRP12 NSD1 DDX23 LLPH EBNA1BP2 PRR11 RBM34 ARL4D

4.53e-074798112int:RSL1D1
InteractionDDX23 interactions

BRIX1 SUPT6H DDX18 RRP12 DDX54 DDX23 EBNA1BP2 TEX10 WDFY4 RBM34 IWS1 DDX10

4.63e-074808112int:DDX23
InteractionWDR46 interactions

BRIX1 CCDC137 RRP12 SERF2 LLPH EBNA1BP2 RBM34 DDX10

4.73e-07173818int:WDR46
InteractionZNF467 interactions

CCDC137 RRP12 TSPYL2 DDX54 NSD1 ZNF480 EBNA1BP2 TEX10

6.13e-07179818int:ZNF467
InteractionSRSF6 interactions

BRIX1 RPL29 CCDC137 DDX18 RRP12 DDX54 DDX23 LLPH EBNA1BP2 RPL7 RBM34 DDX10

7.60e-075038112int:SRSF6
InteractionPARP1 interactions

BRIX1 RPL27 RPL29 PBRM1 ZNF330 SUPT6H DDX18 RRP12 DDX54 NSD1 SGO2 ELF2 SMARCAD1 DLX5 EBNA1BP2 TEX10 RBM34 ZNF292 DDX10

8.27e-0713168119int:PARP1
InteractionCHD4 interactions

BRIX1 RPL27 PBRM1 BAZ2A SUPT6H DDX18 RRP12 DDX54 DDX23 SMARCAD1 EBNA1BP2 RPL7 RBM34 ARL4D IWS1 DDX10

8.33e-079388116int:CHD4
InteractionNOP2 interactions

BRIX1 CCDC137 ZNF330 DDX18 DDX54 DDX23 EBNA1BP2 PRR11 RPL7 RBM34 ARL4D

8.42e-074168111int:NOP2
InteractionKAT6A interactions

BRIX1 RPL27 RPL29 PBRM1 CCDC137 RRP12 DDX54 LLPH EBNA1BP2 TEX10 RPL7 RBM34

8.78e-075108112int:KAT6A
InteractionDDX18 interactions

BRIX1 RPL27 RPL29 ZBTB38 ZNF330 DDX18 DDX23 EBNA1BP2 ARL4D DDX10

9.06e-073348110int:DDX18
InteractionPES1 interactions

BRIX1 RPL27 ZNF330 DDX18 RRP12 DDX23 EBNA1BP2 PRR11 RPL7

9.39e-07258819int:PES1
InteractionLIN28A interactions

BRIX1 RPL27 RPL29 MRPL21 CCDC137 DDX18 RRP12 DDX54 EBNA1BP2 RBM34 DDX10

9.47e-074218111int:LIN28A
InteractionNPM3 interactions

BRIX1 RPL27 CCDC137 DDX18 DDX54 EBNA1BP2 TEX10 RBM34 DDX10

1.07e-06262819int:NPM3
InteractionSRP9 interactions

BRIX1 RPL27 SUPT6H DDX18 DDX54 LLPH CHD8 EBNA1BP2 RPL7 RBM34 IWS1

1.09e-064278111int:SRP9
InteractionH2AB3 interactions

BRIX1 RRP12 TSPYL2 DDX54 EBNA1BP2 TEX10 RPL7

1.25e-06136817int:H2AB3
InteractionRPS24 interactions

BRIX1 RPL27 RPL29 CCDC137 DDX18 RRP12 DDX54 EBNA1BP2 TEX10 RPL7 RBM34 DDX10

1.29e-065298112int:RPS24
InteractionPDGFB interactions

BRIX1 RRP12 DDX54 EBNA1BP2 TEX10 RBM34

1.46e-0688816int:PDGFB
InteractionRPS6 interactions

BRIX1 RPL27 RPL29 MRPL21 CCDC137 ZNF330 DDX18 RRP12 DDX54 LLPH EBNA1BP2 TEX10 RPL7 RBM34 DDX10

1.79e-068748115int:RPS6
InteractionH1-4 interactions

BRIX1 FCF1 RPL29 CCDC137 WDR87 DDX18 RRP12 DDX54 NSD1 EBNA1BP2 TEX10 RBM34 DDX10

2.01e-066568113int:H1-4
InteractionRPL7A interactions

BRIX1 FCF1 RPL27 RPL29 CCDC137 ZNF330 DDX18 DDX54 LLPH EBNA1BP2 RPL7 RBM34 DDX10

2.93e-066798113int:RPL7A
InteractionRPL30 interactions

BRIX1 FCF1 RPL27 RPL29 CCDC137 DDX54 LLPH EBNA1BP2 RPL7 RBM34 DDX10

2.99e-064748111int:RPL30
InteractionNSA2 interactions

BRIX1 RPL27 CCDC137 DDX18 EBNA1BP2 PRR11 RPL7 RBM34

3.40e-06225818int:NSA2
InteractionDOT1L interactions

RPL27 RPL29 PBRM1 CCDC137 AHCTF1 DDX18 RRP12 TSPYL2 DDX54 LLPH EBNA1BP2 TEX10 RPL7 RBM34

3.67e-068078114int:DOT1L
InteractionH1-6 interactions

BRIX1 CCDC137 RRP12 DDX54 LLPH EBNA1BP2 RBM34 DDX10

3.88e-06229818int:H1-6
InteractionRPL10A interactions

BRIX1 RPL27 RPL29 PBRM1 CCDC137 DDX18 DDX54 PRR11 RPL7 RBM34 DDX10

4.10e-064908111int:RPL10A
InteractionRPL10 interactions

BRIX1 RPL27 RPL29 CCDC137 DDX18 RRP12 DDX54 SPIN2A EBNA1BP2 TEX10 RPL7 RBM34 DDX10

4.21e-067028113int:RPL10
InteractionRIT1 interactions

BRIX1 FCF1 RPL27 PIK3C3 NPIPB9 SUPT6H NPIPB6 AHCTF1 DDX18 DDX54 DDX23 NPIPB3 EBNA1BP2 TUBGCP2 TEX10 RPL7 DDX10

6.29e-0612308117int:RIT1
InteractionFGF3 interactions

DDX18 RRP12 TSPYL2 DDX54 EBNA1BP2

6.83e-0666815int:FGF3
InteractionDHX40 interactions

SUPT6H RRP12 DDX54 NSD1 DDX23 TEX10 RBM34 DDX10

7.17e-06249818int:DHX40
InteractionFTSJ3 interactions

BRIX1 CCDC137 ZNF330 SUPT6H RRP12 DDX23 LLPH EBNA1BP2 PRR11 RBM34

7.27e-064228110int:FTSJ3
InteractionABT1 interactions

BRIX1 RPL27 CCDC137 RRP12 TSPYL2 DDX54 LLPH TEX10 RBM34 DDX10

7.42e-064238110int:ABT1
InteractionHECTD1 interactions

BRIX1 RPL27 PBRM1 CCDC137 PIK3C3 DDX18 RRP12 DDX54 SCAPER SGO2 EBNA1BP2 TEX10 RPL7 RBM34 DDX10

7.59e-069848115int:HECTD1
InteractionSNRNP70 interactions

BRIX1 RPL27 RPL29 TRMT10A MRPL21 CCDC137 DDX18 RRP12 DDX54 DDX23 EBNA1BP2 TEX10 RPL7 RBM34 CEP63

7.59e-069848115int:SNRNP70
InteractionESF1 interactions

RPL27 ZNF330 DDX18 SERF2 DDX23 ARL4D DDX10

8.64e-06182817int:ESF1
InteractionNR2C2 interactions

BRIX1 FCF1 RPL27 RPL29 PBRM1 BAZ2A AHCTF1 DDX18 RRP12 DDX54 DDX23 LLPH ELF2 CHD8 EBNA1BP2 RPL7 RBM34 DDX10

8.93e-0614038118int:NR2C2
InteractionRRP8 interactions

BRIX1 CCDC137 RRP12 DDX54 LLPH EBNA1BP2 PRR11 RBM34

9.56e-06259818int:RRP8
InteractionHBP1 interactions

BRIX1 RRP12 DDX54 EBNA1BP2 TEX10 RBM34

1.02e-05123816int:HBP1
InteractionRNF151 interactions

BRIX1 CCDC137 TSPYL2 DDX54 EBNA1BP2 RBM34

1.02e-05123816int:RNF151
InteractionRBM4B interactions

BRIX1 FCF1 RPL29 CCDC137 RRP12 DDX54 RBM34 DDX10

1.04e-05262818int:RBM4B
InteractionSRPK3 interactions

BRIX1 CCDC137 DDX18 DDX54 LLPH EBNA1BP2 RBM34

1.14e-05190817int:SRPK3
InteractionZNF689 interactions

ZBTB38 LLPH SMARCAD1 PRR11 RPL7

1.20e-0574815int:ZNF689
InteractionILF3 interactions

BRIX1 RPL27 RPL29 ZNF330 RRP12 DDX54 NSD1 LLPH SMARCAD1 EBNA1BP2 TEX10 RPL7 RBM34 DDX10

1.21e-058968114int:ILF3
InteractionRPL14 interactions

BRIX1 RPL27 RPL29 CCDC137 DDX18 DDX54 LLPH EBNA1BP2 RPL7 RBM34 DDX10

1.30e-055548111int:RPL14
InteractionEED interactions

BRIX1 FCF1 RPL27 RPL29 PBRM1 BAZ2A SUPT6H AHCTF1 DDX18 RRP12 DDX54 NSD1 SMARCAD1 EBNA1BP2 TUBGCP2 TEX10 RPL7 DDX10

1.34e-0514458118int:EED
InteractionKNOP1 interactions

RPL27 ZNF330 DDX23 LLPH EBNA1BP2 PRR11 RBM34 ARL4D

1.36e-05272818int:KNOP1
InteractionPRR11 interactions

BRIX1 RRP12 LLPH EBNA1BP2 PRR11 RBM34

1.40e-05130816int:PRR11
InteractionCNBP interactions

BRIX1 FCF1 RPL27 CCDC137 LLPH EBNA1BP2 RPL7 RBM34

1.52e-05276818int:CNBP
InteractionIL17B interactions

RPL27 RPL29 DDX54 LLPH RBM34

1.55e-0578815int:IL17B
Cytoband16p11.2

NPIPB8 NPIPB7 NPIPB13 NPIPB12 NPIPB6 NPIPB11

1.60e-0619185616p11.2
CytobandEnsembl 112 genes in cytogenetic band chr16p12

NPIPB7 NPIPB4 NPIPB6 NPIPB3 NPIPB5

1.79e-05172855chr16p12
CytobandXp11.1

SPIN2A SPIN2B

2.03e-054852Xp11.1
Cytoband16p12.2

NPIPB4 NPIPB3 NPIPB5

4.55e-053785316p12.2
CytobandEnsembl 112 genes in cytogenetic band chr16p11

NPIPB8 NPIPB13 NPIPB12 NPIPB9 NPIPB11

1.73e-04278855chr16p11
Cytoband3p21

RPL29 PBRM1

1.72e-03338523p21
GeneFamilyDEAD-box helicases

DDX18 DDX54 DDX23 DDX10

4.17e-0642474499
GeneFamilyTudor domain containing|Spindlin family

SPIN2A SPIN2B

6.58e-0554721089
GeneFamilyL ribosomal proteins

RPL27 RPL29 RPL7

3.14e-0451473729
GeneFamilyTudor domain containing

SPIN2A SPIN2B

4.16e-0337472780
CoexpressionJINESH_BLEBBISHIELD_VS_LIVE_CONTROL_UP

NPIPB15 CCDC137 CEBPG NPIPB13 NPIPB12 NPIPB11 SERF2 ANKRD30B NPIPB3 SLC4A5 PGF

3.71e-083808411M38974
CoexpressionJINESH_BLEBBISHIELD_TRANSFORMED_STEM_CELL_SPHERES_DN

NPIPB15 CCDC137 NPIPB13 NPIPB12 NPIPB11 SERF2 ANKRD30B NPIPB3 SLC4A5

5.49e-07302849M38975
CoexpressionHAMAI_APOPTOSIS_VIA_TRAIL_UP

BRIX1 ZBTB38 PIEZO2 PBRM1 AHCTF1 LLPH NPIPB3 SMARCAD1 IWS1 DDX10 CEP63

7.87e-066568411M18979
ToppCellNeuron-Postmitotic-Inhibitory_Neuron-SST-MGE1-4|World / Primary Cells by Cluster

RPL27 RPL29 SYT1 DLX1 DLX5 RPL7 ARL4D

8.92e-081938572eb6e4cff4fe3ce564c1581f6f7df4834895aaa9
ToppCell3'_v3-lymph-node_spleen-Lymphocytic_T_CD8-Tnaive/CM_CD8|lymph-node_spleen / Manually curated celltypes from each tissue

RPL27 RPL29 MMP28 APBA2 DSEL RPL7 NAA16

9.90e-08196857e7fd508cb9a8a5b3d1c0247dabf486c4434b5e94
ToppCellBrain_organoid-organoid_Velasco_nature-6_mon-Neuronal-Immature_Interneurons|6_mon / Sample Type, Dataset, Time_group, and Cell type.

RPL27 RPL29 SYT1 DLX1 DLX5 RPL7 ARL4D

1.06e-071988575798640425cabf4ac517b7f96a9dfd32f6e5e7c5
ToppCellMS-IIF-Lymphocyte-T/NK-CD8+_T_naive|IIF / Disease, condition lineage and cell class

RPL27 RPL29 MMP28 APBA2 DSEL RPL7 NAA16

1.14e-07200857350b189d0baca9516375786c3712c76c6b4fb390
ToppCellBrain_organoid-organoid_Kanton_Nature-Organoid-4M-Radial_glial-RGCs_early_1|Organoid-4M / Sample Type, Dataset, Time_group, and Cell type.

RPL27 RPL29 SERF2 CLPSL1 WDFY4 RPL7

7.64e-071658561917f05a4050e28f669192e45023b0a31c53174b
ToppCellfacs-Mammary_Gland-Mammary_Gland-3m|Mammary_Gland / Skin_Bladder_Kidney_Mammary_Gland - method, tissue, subtissue, age, lineage, cell ontology and free annotation

RPL27 RPL29 DDX18 SERF2 LLPH RPL7

2.02e-06195856e553e7bb4443b3b7d4c0aeb7170ecbb70a8db496
ToppCell(2)_NK/T-(22)_CD8+_T_cell-(221)_CD8+_Naive_T_cell|(22)_CD8+_T_cell / immune cells in Peripheral Blood (logTPM normalization)

RPL29 MMP28 APBA2 DSEL RPL7 NAA16

2.14e-06197856ac77bcd7548db40147bf55dbf0ce86ed0b6a86da
ToppCellIIF-Lymphocyte-T_NK-CD8_Naive|IIF / Disease, Lineage and Cell Type

RPL27 RPL29 APBA2 DSEL RPL7 NAA16

2.14e-06197856fa376bde80ed0ae57ae064ff7165cfb870724b93
ToppCellBrain_organoid-organoid_Velasco_nature-6_mon-Neuronal|6_mon / Sample Type, Dataset, Time_group, and Cell type.

RPL29 SYT1 DLX1 DLX5 RPL7 ARL4D

2.34e-062008567534005613ee22aee2bac51070929957dece3c8b
ToppCellFetal_brain-organoid_Tanaka_cellReport-GW23-Neuronal-Interneuron|GW23 / Sample Type, Dataset, Time_group, and Cell type.

SYT1 DLX1 DLX5 ARL4D

6.49e-0663854c10d344bf32a091deb79e1f128f7dd5e9f4abaa3
ToppCellnormal-na-Lymphocytic_T-CD8-positive,_alpha-beta_T_cell-male|normal / PBMC cell types (v2) per disease, treatment status, and sex

ZBTB38 NPIPB4 TSPYL2 APBA2 DSEL

1.19e-0515585508295584395e8d9cfc1b1648f98754b3ac53e587
ToppCellfacs-Brain_Non-Myeloid-Striatum_-18m-Epithelial-neuronal_stem_cell|Brain_Non-Myeloid / Brain_Non-Myeloid_Brain_Myeloid - method, tissue, subtissue, age, lineage, cell ontology and free annotation

SGO2 DLX1 DLX5 PRR11 SERF1A

1.97e-0517285535c20de4db47dbf31c857d23c7a25cd7f95c085c
ToppCellMild/Remission-B_intermediate-10|Mild/Remission / disease group and sub_cluster of B and Plasma cells(res = 0.5)

NPIPB8 TSPYL2 SYT1 WDFY4 ARL4D

2.66e-05183855278064c9f0582463b83bf156d34e77f60187613b
ToppCellILEUM-inflamed-(5)_Plasma-(5)_IgA_plasma_cells|(5)_Plasma / shred on tissue, inflammation_status, cell class(v3), cell subclass (v2)

ZBTB38 DDX18 TSPYL2 SYT1 ZNF292

3.10e-05189855a0634d72bfdd5f93877724ed6480b50a3a046f71
ToppCellNeuron-Postmitotic-Inhibitory_Neuron|World / Primary Cells by Cluster

RPL29 SYT1 DLX1 DLX5 ARL4D

3.26e-051918554dd9c8117c4499ed9bde127baf2598603a82080d
ToppCellBrain_organoid-organoid_Kanton_Nature-Organoid-2M-Neuronal-ventral_progenitors_and_neurons_2|Organoid-2M / Sample Type, Dataset, Time_group, and Cell type.

RPL29 DLX1 DLX5 RPL7 ARL4D

3.26e-05191855509d17d8ee0d028757ce0f2c9b97e5875f06f0ab
ToppCellNeuron-Postmitotic-Inhibitory_Neuron-SST-MGE1|World / Primary Cells by Cluster

RPL29 SYT1 DLX1 DLX5 ARL4D

3.34e-05192855bcc499f4c7ba2898ecd9c47bf68c92ed359b81ba
ToppCell10x_3'_v2v3-Neoplastic-Stem-like-NPC-like-NPC-like_Prolif-D|10x_3'_v2v3 / Platform, Oncotype, Lineage, Cell_class, celltype (level4), mutation group

GPR22 SYT1 SGO2 DLX5 PRR11

3.34e-05192855f518839ecd9377537a414e8798766f7d91eafeac
ToppCell3'_v3-bone_marrow-Lymphocytic_T_CD8-Tnaive/CM_CD8|bone_marrow / Manually curated celltypes from each tissue

RPL29 MMP28 DSEL RPL7 NAA16

3.42e-051938558eee202253f73342b5f5bfdc094435180970424a
ToppCellPBMC-Control-Lymphocyte-T/NK-CD8+_T-CD8+_T_naive|Control / Location, Disease Group, Cell group, Cell class and sub_cluster (2021.03.01)

MMP28 TSPYL2 APBA2 DSEL NAA16

3.42e-05193855d371403b51281a6e37652fa8dc1b2dd81d2ab371
ToppCellPBMC-Control-Lymphocyte-T/NK-CD8+_T-CD8+_T_naive-|Control / Location, Disease Group, Cell group, Cell class and sub_cluster (2021.03.01)

MMP28 TSPYL2 APBA2 DSEL NAA16

3.42e-051938556436d3bfce02d137b76e5c4c8b2fe27974c57c99
ToppCellPBMC-Control-Lymphocyte-T/NK-CD8+_T-CD8+_T_naive-|Control / Location, Disease Group, Cell group, Cell class and sub_cluster (2021.03.09)

MMP28 TSPYL2 APBA2 DSEL NAA16

3.42e-051938553cde93bbfc1ae6fb586ae6b7aaa6ed8b5eee28a4
ToppCellPBMC-Control-Lymphocyte-T/NK-CD8+_T-CD8+_T_naive|Control / Location, Disease Group, Cell group, Cell class (2021.03.09)

MMP28 TSPYL2 APBA2 DSEL NAA16

3.42e-05193855d755dc6de4fbd4d8f5d8a88aac497e7b9e8b89de
ToppCellILEUM-non-inflamed-(1)_T_cell-(1)_Naive_T_cells|(1)_T_cell / shred on tissue, inflammation_status, cell class(v3), cell subclass (v2)

RPL27 RPL29 MMP28 RPL7 NAA16

3.69e-05196855eda187f50e1bcf8f9bc9af3ea05c63748d66570a
ToppCellILEUM-inflamed-(1)_Naive_T_cells|inflamed / shred on tissue, inflammation_status, cell class(v3), cell subclass (v2)

RPL27 RPL29 APBA2 RPL7 NAA16

3.69e-0519685572a34b81663475ab378b3bb9a02136df286881b3
ToppCell10x5'-lymph-node_spleen-Lymphocytic_T_CD4-Tnaive/CM_CD4_activated|lymph-node_spleen / Manually curated celltypes from each tissue

RPL29 MMP28 TSPYL2 RPL7 ARL4D

3.69e-05196855c945dc6c56c61732e065daaad7e6f48c02ee183c
ToppCellmoderate-Epithelial-Basal|moderate / Severity, Lineage and Cell class of Nasopharyngeal (NS) Samples from Patients and Controls

RPL27 RPL29 SERF2 RPL7 ARL4D

3.78e-051978556c81bcf6e16ffa7df40e2339feb3362ec3af8837
ToppCell(221)_CD8+_Naive_T_cell|World / immune cells in Peripheral Blood (logTPM normalization)

RPL29 MMP28 APBA2 DSEL NAA16

3.78e-0519785559621a1f016b9f467e69bd5977ccdafa03b4ce21
ToppCellBrain_organoid-organoid_Kanton_Nature-Organoid-4M-Neuronal-ventral_progenitors_and_neurons_3|Organoid-4M / Sample Type, Dataset, Time_group, and Cell type.

RPL27 RPL29 DLX1 DLX5 RPL7

3.78e-05197855d77bc37a77546a1f0a508486a38a45e571e4645b
ToppCellsystemic_lupus_erythematosus-managed-Lymphocytic_T-T8_naive-male|systemic_lupus_erythematosus / PBMC cell types (v2) per disease, treatment status, and sex

RPL27 RPL29 APBA2 DSEL RPL7

3.78e-05197855284008c2d12d6140919b4b3a694652ab356fc81f
ToppCellBrain_organoid-organoid_Kanton_Nature-Organoid-2M-Neuronal-ventral_progenitors_and_neurons_3|Organoid-2M / Sample Type, Dataset, Time_group, and Cell type.

RPL27 RPL29 DLX1 DLX5 RPL7

3.78e-0519785562c0682eb32a41c58d31ae33b23e7d61ce5a6abb
ToppCellPCW_07-8.5-Mesenchymal-Mesenchymal_fibroblastic-mes_immature2_(2)|PCW_07-8.5 / Celltypes from embryonic and fetal-stage human lung

RPL27 RPL29 PIEZO2 SERF2 RPL7

3.87e-0519885589e25687b614525548279e5fa293c66f5c4abec3
ToppCellnormal-na-Lymphocytic_T-T8_naive|normal / PBMC cell types (v2) per disease, treatment status, and sex

RPL27 APBA2 DSEL RPL7 NAA16

3.87e-0519885561b7e313967acff0a7cfc0a797f78494d3d08e29
ToppCelllymphoid-T_cell|World / Lineage, cell class and subclass

RPL27 RPL29 DDX18 APBA2 RPL7

3.87e-05198855c427a52bc5098894c55b62d9b8545a2bbf9923fd
ToppCellGoblet_2|World / shred by cell class for nasal brushing

RPL27 RPL29 SERF2 RPL7 ARL4D

3.87e-051988556f9ffcef84dd2ab6084281f7b5169335e323304d
ToppCellnormal-na-Lymphocytic_T-T8_naive-female|normal / PBMC cell types (v2) per disease, treatment status, and sex

RPL27 APBA2 DSEL RPL7 NAA16

3.87e-05198855ac8e21629991e47796e2c0a201a6d3bd8cd30b85
ToppCellcontrol-CD8+_T_naive|World / Cohort 1 (10x PBMC) with disease condition, cell group and cell class

RPL27 RPL29 MMP28 APBA2 RPL7

3.87e-05198855a2c70840c38e9a76543060c112e7d9332dd58a89
ToppCellCOVID-19-Heart-Mito_EC|Heart / Disease (COVID-19 only), tissue and cell type

RPL27 RPL29 SERF2 TNNT3 RPL7

3.87e-051988553cc34b5d333abba11ab846c26fb4477051958465
ToppCellPCW_13-14-Mesenchymal-Mesenchymal_fibroblastic-mes_immature2_(2)|PCW_13-14 / Celltypes from embryonic and fetal-stage human lung

RPL27 RPL29 PIEZO2 DLX5 RPL7

3.87e-05198855df681a2308bf75f4d3cef05d7418aabc96116880
ToppCellsystemic_lupus_erythematosus-managed-Lymphocytic_T-T8_naive-female|systemic_lupus_erythematosus / PBMC cell types (v2) per disease, treatment status, and sex

RPL27 RPL29 APBA2 DSEL RPL7

3.96e-05199855fd989d9088646b3ffda9c5c9c920048f98934e07
ToppCell10x_3'_v3-spleen_(10x_3'_v3)-lymphocytic-B_lymphocytic-memory_B_cell|spleen_(10x_3'_v3) / Per Platform+tissue_group, by lineage_subgroup, cell_group, cell_type

RPL27 RPL29 SYT1 WDFY4 RPL7

3.96e-0519985538747e07853f60d11eda9371cf5e6493e21a9cc3
ToppCellcontrol-CD8+_T_naive|control / Cohort 1 (10x PBMC) with disease condition, cell group and cell class

MMP28 TSPYL2 APBA2 DSEL NAA16

3.96e-051998556a61ce7404c65e506091fee99a2001f5a9b39f31
ToppCellPCW_10-12-Mesenchymal-Mesenchymal_fibroblastic-mes_immature2_(2)|PCW_10-12 / Celltypes from embryonic and fetal-stage human lung

RPL27 RPL29 PIEZO2 DLX5 RPL7

3.96e-05199855d946db0e8cc3fbed2d0eb9b4346400138d43219f
ToppCellsystemic_lupus_erythematosus-managed-Lymphocytic_T-T8_naive|systemic_lupus_erythematosus / PBMC cell types (v2) per disease, treatment status, and sex

RPL27 RPL29 APBA2 DSEL RPL7

3.96e-051998558a89d6d824f8ac5929cfabd00e63811cecb97eab
ToppCellFetal_brain-fetalBrain_Zhong_nature-GW26-Neuronal|GW26 / Sample Type, Dataset, Time_group, and Cell type.

SYT1 DLX1 DLX5 RPL7 ARL4D

3.96e-05199855a255484ba77bd2741a541da278efc8cf4abbe570
ToppCellsevere-CD8+_T_naive|severe / Cohort 1 (10x PBMC) with disease condition, cell group and cell class

RPL29 MMP28 APBA2 DSEL RPL7

3.96e-05199855656e639228b3f2dca6955a487e4999e73a69bc51
ToppCellMS-Multiple_Sclerosis-Lymphocyte-T/NK-CD8+_T_naive|Multiple_Sclerosis / Disease, condition lineage and cell class

RPL29 APBA2 DSEL RPL7 NAA16

4.06e-052008553c919578aed30f77408a3405bce7b71bcda203e0
ToppCellMS-Multiple_Sclerosis-Lymphocyte-T/NK-CD4+_T_naive|Multiple_Sclerosis / Disease, condition lineage and cell class

RPL27 RPL29 MMP28 APBA2 RPL7

4.06e-05200855c1a0adaf2e4b099434557272f204cd36d6d84819
ToppCellControl-Control-Lymphocyte-T/NK-CD8+_T_naive|Control / Disease, condition lineage and cell class

MMP28 TSPYL2 APBA2 DSEL NAA16

4.06e-05200855906de95adc9716982ab32f216dddeb52639bad06
ToppCellCOVID-19-COVID-19_Convalescent-Lymphocyte-T/NK-CD8+_T_naive|COVID-19_Convalescent / Disease, condition lineage and cell class

RPL27 RPL29 APBA2 DSEL RPL7

4.06e-0520085565ae349fac4084faacbc6a645a92398f6324770e
ToppCellBrain_organoid-organoid_Tanaka_cellReport-6m-Neuronal-Interneuron|6m / Sample Type, Dataset, Time_group, and Cell type.

SYT1 DLX1 DLX5 RPL7 ARL4D

4.06e-05200855274871d632bbbe03720726a59ab3ec6d5fa0da11
ToppCellBrain_organoid-organoid_Kanton_Nature-Organoid-1M-Neuronal-ventral_progenitors_and_neurons_3|Organoid-1M / Sample Type, Dataset, Time_group, and Cell type.

DLX1 DLX5 CLPSL1 ARL4D

1.67e-04144854ce5e219f2548b51440b8b3e1a9f011afd4510d19
ToppCellnormal_Lung-T/NK_cells-Naive_CD8+_T|T/NK_cells / Location, Cell class and cell subclass

PLEKHG4B SPIN2A TUBGCP2 RPL7

1.95e-04150854b81f8dfc7755252c457e38bb32b103af3b6f1c01
ToppCell3'_v3-Lung-Lymphocytic_T_CD4-T_CD4/CD8|Lung / Manually curated celltypes from each tissue

NPIPB4 TSPYL2 SCAPER APBA2

2.00e-04151854999c11d19b61d6b130ad5e623afa83cbdfe13cdd
ToppCellnormal_Lung-Myeloid_cells-Pleural_Mac|Myeloid_cells / Location, Cell class and cell subclass

RPL27 RPL29 NPIPB11 RPL7

2.15e-04154854835ef49d314ecbcbfd8d1041ba202a5eedcda0bd
ToppCellFetal_brain-organoid_Tanaka_cellReport-GW26-Neuronal-Interneuron|GW26 / Sample Type, Dataset, Time_group, and Cell type.

DLX1 DLX5 ARL4D

2.49e-0464853fefabdf8d72a8f3caf78eb79d759edb475bdb2ad
ToppCell390C-Myeloid-Dendritic-cDC_proliferating_2|Dendritic / Donor, Lineage, Cell class and subclass (all cells)

TRMT10A EVC2 SGO2 CFAP210

2.61e-04162854a957c7e347189b72fbd47db3075bb5e879a21c67
ToppCell390C-Myeloid-Dendritic-cDC_proliferating_2|390C / Donor, Lineage, Cell class and subclass (all cells)

PLEKHG4B TRMT10A SGO2 CFAP210

2.74e-04164854ad508f53009efdd1dae7abcdb5431387f3f7e7b2
ToppCell390C-Myeloid-Dendritic-cDC_proliferating_2|Myeloid / Donor, Lineage, Cell class and subclass (all cells)

TRMT10A EVC2 SGO2 CFAP210

2.80e-04165854a5c3af634d2698f9a01cf074791756b7669f9fff
ToppCell10x3'2.3-week_17-19-Hematopoietic-HSC/MPP_and_pro-myeloid_DC_progenitor|week_17-19 / cell types per 3 fetal stages;per 3',per 5'

RPL27 RPL29 EBNA1BP2 RPL7

3.00e-041688542c42588ca9775270591485f9bf805fe8ab9c0671
ToppCellmetastatic_Lymph_Node-Myeloid_cells-CD141+_DCs|Myeloid_cells / Location, Cell class and cell subclass

PLEKHG4B DLX1 TNNT3 WDFY4

3.07e-04169854a4204bdd75837f5fee9aaac459cb4c19ee2a7bf4
ToppCell3'-GW_trimst-2-LargeIntestine-Neuronal-Glial_immature-Glia_3_(BCAN+)|GW_trimst-2 / Celltypes from developing, pediatric, Crohn's, & adult GI tract

USH1G SYT1 DLX1 DLX5

3.07e-041698542456b3e7776e8a2214972be1b4d66a3ca5480ae0
ToppCellBrain_organoid-organoid_Kanton_Nature-Organoid-1M-Proliferating-cycling_ventral_progenitors|Organoid-1M / Sample Type, Dataset, Time_group, and Cell type.

MMP28 SGO2 DLX1 DLX5

3.14e-0417085473601c873b177d5d134618d8e228c51381119f7d
ToppCellCOVID-19_Convalescent|World / Disease condition and Cell class

MFSD14A RPL27 RPL29 RPL7

3.21e-041718540784fcc45d7b5afba004dd65247d17f452f52b30
ToppCellfacs-Brain_Non-Myeloid-Cerebellum_-18m-Epithelial-neuronal_stem_cell|Brain_Non-Myeloid / Brain_Non-Myeloid_Brain_Myeloid - method, tissue, subtissue, age, lineage, cell ontology and free annotation

PIEZO2 SGO2 DLX1 DLX5

3.35e-04173854f38bf7584e08d15a6e2c116b7c3551ba475a5e14
ToppCell367C-Lymphocytic-CD4_T-cell-CD4+_Effector_T_cell-1|CD4_T-cell / Donor, Lineage, Cell class and subclass (all cells)

TSPYL2 APBA2 DSEL ARL4D

3.35e-041738545d3c917e4d0de3158550a8ab2006ddfa87159ffa
ToppCell356C-Lymphocytic-NK_cells-NK_cell_E|NK_cells / Donor, Lineage, Cell class and subclass (all cells)

NPIPB4 ARHGAP31 CFAP210 CEP63

3.35e-04173854090dc3c5bd2652a65c2490fc889da858c3af368f
ToppCell10x5'-blood-Lymphocytic_T_CD8-Tnaive/CM_CD8|blood / Manually curated celltypes from each tissue

RPL29 APBA2 DSEL RPL7

3.43e-041748548273de40552d1cca1a8fe3647fd5e4cb4bb70f99
ToppCell356C-Lymphocytic-NK_cells-NK_cell_E|Lymphocytic / Donor, Lineage, Cell class and subclass (all cells)

NPIPB4 ARHGAP31 CFAP210 CEP63

3.43e-04174854a79ebb01a5849c314e02594a9c95009dbb03cb8c
ToppCellE18.5-Mesenchymal-Mesenchymal_myocytic-Myofibroblast_vascular-VSMC-VSMC_G2M|E18.5 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif

SGO2 PRR11 TNNT3 PGF

3.43e-0417485441eb0a214a8b4015a26311f77061c8147144f0e7
ToppCellrenal_cortex_nuclei-CKD+DKD_normotensive-Immune-Myeloid-Macrophage_Dendritic-Cycling_Mononuclear_Phagocyte|CKD+DKD_normotensive / Celltypes from Cells and Nuclei per compartment and clinical group

PLEKHG4B SGO2 PRR11 WDFY4

3.50e-04175854f7d191cde68de8f3457fa62b1df53b6d0dbe5001
ToppCell3'-Parenchyma_lung-Epithelial-Epithelial_transtional-secretory-club_cell-Club_(non-nasal)-Club_(non-nasal)_L.0.4.0.0|3' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5

RPL27 TNNT3 RPL7 FER1L6

3.50e-041758541d1984a03d0f04cd06048ed62d123033af364e82
ToppCell3'-Adult-Appendix-Epithelial-mature_enterocytic|Adult / Celltypes from developing, pediatric, Crohn's, & adult GI tract

ARHGAP31 ANKRD30B SYT1 SGO2

3.58e-0417685430adf8f1638c6244586f8101c2590bb964dfae00
ToppCell3'-Adult-Appendix-Epithelial-mature_enterocytic-Colonocyte|Adult / Celltypes from developing, pediatric, Crohn's, & adult GI tract

ARHGAP31 ANKRD30B SYT1 SGO2

3.58e-0417685423fa02d4c39e0b8faa1658116d50b6233a952ccc
ToppCelldroplet-Limb_Muscle-MUSCLE-30m|Limb_Muscle / Tongue_Heart_Limb_Muscle_Aorta_Diaphragm - method, tissue, subtissue, age, lineage, cell ontology and free annotation

ZBTB38 SLFN12 NSD1 DDX23

3.74e-0417885401dafd19de04eff459253eaa9a35debf8f3deedf
ToppCell3'-GW_trimst-2-SmallIntestine-Neuronal-neuron_precursor-Neuroblast|GW_trimst-2 / Celltypes from developing, pediatric, Crohn's, & adult GI tract

GPR22 SYT1 DLX1 DLX5

3.74e-0417885413dfd28a80889c2dacdc65b94a41bb9762dc409d
ToppCellMid-temporal_gyrus_(MTG)|World / Sample groups (6 Anatomical region groups), with 5 level hierarchy of cell types

SCAPER ANKRD30B NPIPB3 NPIPB5

3.74e-04178854ad187db4c40b9078d54dd915c143e0172b2f47b8
ToppCellVE-CD4-proli_CD4|VE / Condition, Cell_class and T cell subcluster

RPL27 RPL29 NPIPB9 RPL7

3.74e-04178854f0a0cbf73e03f1b29f0be6598517c8a1da41c8dc
ToppCell3'-GW_trimst-2-SmallIntestine-Neuronal-neuron_precursor|GW_trimst-2 / Celltypes from developing, pediatric, Crohn's, & adult GI tract

GPR22 SYT1 DLX1 DLX5

3.74e-04178854a9ba4089413b1c55d667ce836b6972ca572ee2b8
ToppCelldroplet|World / Fat_BAT_GAT_MAT_SCAT - method, tissue, subtissue, age, lineage, cell ontology and free annotation

RPL27 RPL29 SERF2 RPL7

3.82e-041798541c29ecd294c140d73417bf1c11fe8bd3edd24eb7
ToppCelldroplet-Lung-30m-Hematologic-myeloid-intermediate_monocyte-intermediate_monocyte_l14|30m / method, tissue, age, lineage, sublineage, cell ontologies, cell type and subtype

RPL27 RPL29 SERF2 RPL7

3.90e-0418085405cce7e3c13dd3e3b70aaad841097be51cfadad3
ToppCell5'-GW_trimst-2-SmallIntestine-Neuronal-Glial_immature-ENCC/glia_Progenitor|GW_trimst-2 / Celltypes from developing, pediatric, Crohn's, & adult GI tract

GPR22 SYT1 DLX1 DLX5

4.06e-04182854d6740bca2b974122b8451989365a94a81140afd1
ToppCellSmart-start-Cell-Wel_seq-Neoplastic-Stem-like-NPC-like-NPC-like_neural-G|Smart-start-Cell-Wel_seq / Platform, Oncotype, Lineage, Cell_class, celltype (level4), mutation group

RPL27 RPL29 SYT1 DLX5

4.06e-04182854fa23d5bed1147a423c42bd30029a06963410b16e
ToppCellsevere_influenza-B_intermediate|World / disease group, cell group and cell class (v2)

WDR87 SYT1 WDFY4 ARL4D

4.06e-04182854e633a908a2fb30ed362cf22fbb8d6839f31f1751
ToppCellPND14-Endothelial-Endothelial_blood-vessel-Microvascular_EC-CAP2-CAP2_prolif|PND14 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif

TBRG1 MMP28 DDX54 CFAP210

4.15e-041838543ef9ac1ae13b6172f9121ab1c129ecaa0fef460f
ToppCell390C-Lymphocytic-CD4_T-cell-Treg_cell_3|390C / Donor, Lineage, Cell class and subclass (all cells)

CCDC137 SGO2 SPIN2B WDFY4

4.15e-04183854228092290dbb08785c4eda224e3ad03e99e10fab
ToppCellCOVID-19_Convalescent-Lymphoid_T/NK-CD8+_T_naive|COVID-19_Convalescent / Disease group, lineage and cell class

RPL27 APBA2 DSEL RPL7

4.23e-041848540299cd30a3ea8e861a9d529043c204048ae21d29
ToppCellILEUM-non-inflamed-(1)_Central_Memory_T_cells|non-inflamed / shred on tissue, inflammation_status, cell class(v3), cell subclass (v2)

RPL27 RPL29 GPR22 RPL7

4.23e-0418485462b7a1a9b61e29b7f2ea144c9096db80b49fe320
ToppCellremission-CD8+_T_naive|remission / disease stage, cell group and cell class

RPL29 APBA2 DSEL RPL7

4.23e-04184854fe20fa4457d4a4a75689978275b0afb5f6243faf
ToppCellrenal_cortex_nuclei-Hypertensive_with+without-CKD-Mesenchymal-Myocytic_interstitial_cell-Vascular_Smooth_Muscle_Cell_/_Pericyte|Hypertensive_with+without-CKD / Celltypes from Cells and Nuclei per compartment and clinical group

PIEZO2 SYT1 DLX5 PGF

4.32e-0418585451dfe6ac7df8b330343b37e3bee71e5c65267189
ToppCelldroplet|World / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation

RPL27 RPL29 SERF2 RPL7

4.32e-041858544c8a25f36cbf43fc78d38dfeb3f1cab160bb029d
ToppCellremission-CD8+_T_naive|World / disease stage, cell group and cell class

RPL29 APBA2 DSEL RPL7

4.32e-0418585469304d7dd406ac7e96d51c239d7035a06d88704f
ToppCellPBMC-Convalescent-Lymphocyte-T/NK-CD8+_T-CD8+_T_naive|Convalescent / Location, Disease Group, Cell group, Cell class and sub_cluster (2021.03.01)

RPL27 APBA2 DSEL RPL7

4.32e-0418585427dbfcd40ec832d5cf757331d8af3b5176ae90fb
ToppCellrenal_cortex_nuclei-Hypertensive_with+without-CKD-Mesenchymal-Myocytic_interstitial_cell-Vascular_Smooth_Muscle_Cell_/_Pericyte-|Hypertensive_with+without-CKD / Celltypes from Cells and Nuclei per compartment and clinical group

PIEZO2 SYT1 DLX5 PGF

4.32e-04185854a8c02cec3c414f3a0da9f2d6d28ce563b0030705
ToppCellPBMC-Convalescent-Lymphocyte-T/NK-CD8+_T-CD8+_T_naive-|Convalescent / Location, Disease Group, Cell group, Cell class and sub_cluster (2021.03.01)

RPL27 APBA2 DSEL RPL7

4.32e-04185854ca8e921a6b45cd39474b9f86c95e7be023585c5d
ToppCelldroplet|World / Skin_Bladder_Kidney_Mammary_Gland - method, tissue, subtissue, age, lineage, cell ontology and free annotation

RPL27 RPL29 SERF2 RPL7

4.41e-04186854fd69a94144710d63fe047cdc50813f42ac7ab68d
ToppCelldroplet-Lung-30m-Hematologic-myeloid-classical_monocyte-classical_monocyte_l14|30m / method, tissue, age, lineage, sublineage, cell ontologies, cell type and subtype

RPL27 RPL29 SERF2 RPL7

4.41e-04186854e57a1ee071dab1f4dba944d8032a17d609b3df1a
ToppCellfacs-Large_Intestine-Proximal-3m-Epithelial-Lgr5-_amplifying_undifferentiated_cell|Large_Intestine / Large_Intestine_Pancreas_Liver - method, tissue, subtissue, age, lineage, cell ontology and free annotation

RPL29 ZBTB38 DDX18 LLPH

4.41e-0418685415ab6666748a641226e42e6ca6eeaf186a501c95
ToppCellfacs-Large_Intestine-Proximal-3m-Epithelial-epithelial_cell_of_large_intestine|Large_Intestine / Large_Intestine_Pancreas_Liver - method, tissue, subtissue, age, lineage, cell ontology and free annotation

RPL29 ZBTB38 DDX18 LLPH

4.41e-041868544ed1b97e2552f3c4134f25665d7513498ffac16c
ToppCell5'-GW_trimst-2-SmallIntestine-Neuronal-neurons_A-Branch_A1_(iMN)|GW_trimst-2 / Celltypes from developing, pediatric, Crohn's, & adult GI tract

MMP28 SYT1 DLX1 DLX5

4.50e-04187854a748b3a59e398e0da019db3f16d38adb1960c29f
Drugglycylglycylglycine

SPIN2A NSD1 SPIN2B ARL4D

1.23e-0540814CID000011161
Druglithium indium

SPIN2A SPIN2B

1.25e-052812CID011116062
Drugscandium phosphate

SPIN2A SPIN2B

1.25e-052812CID006365269
Drugrubidium nitrate

SPIN2A SPIN2B

1.25e-052812CID000025731
DiseaseARTHROGRYPOSIS, DISTAL, TYPE 2B

PIEZO2 TNNT3

8.03e-056692C1834523
DiseaseDistal arthrogryposis

PIEZO2 TNNT3

1.92e-049692cv:C0265213
DiseaseDental enamel hypoplasia

SCAPER SYT1

3.50e-0412692EFO_1001304
DiseaseAutistic Disorder

NSD1 CHD8 DLX1 WDFY4 ZNF292

3.69e-04261695C0004352
DiseasePrimary microcephaly

TRMT10A CEP63

1.21e-0322692C0431350
DiseaseCrohn's disease (is_marker_for)

PBRM1 PGF

2.10e-0329692DOID:8778 (is_marker_for)
Diseasewhite matter volume measurement

SYT1 ZNF292

2.55e-0332692EFO_0008320
DiseaseBMI-adjusted waist circumference, physical activity measurement

ZBTB38 PBRM1 NSD1

3.03e-03123693EFO_0007789, EFO_0008002
DiseaseIntellectual Disability

SCAPER NSD1 SYT1 CHD8 ZNF292

3.96e-03447695C3714756
DiseaseMental Retardation, Psychosocial

SCAPER NSD1 CHD8

4.27e-03139693C0025363
DiseaseProfound Mental Retardation

SCAPER NSD1 CHD8

4.27e-03139693C0020796
DiseaseMental deficiency

SCAPER NSD1 CHD8

4.27e-03139693C0917816

Protein segments in the cluster

PeptideGeneStartEntry
RGKTKMQKKLERRKQ

USH1G

211

Q495M9
EMKNPISNKKRKKAA

CCDC137

76

Q6PK04
FQNRRAKERKMIKKK

CDX4

221

O14627
DKRIHQKLKRFKTKM

CHD8

691

Q9HCK8
MILKRKKAARGGKKR

ARL4D

186

P49703
KKPVNLNKRDMKKRT

ANKRD30B

61

Q9BXX2
AKSKKKMRQKVQRGE

BAZ2A

711

Q9UIF9
ARKKRIYKRQRKMKQ

BRIX1

331

Q8TDN6
VSRVKRMQKAAKIKK

APBA2

401

Q99767
FQNKRSKFKKLMKQG

DLX1

176

P56177
QNKRSKIKKIMKNGE

DLX5

186

P56178
KINGKRKTARKQKMF

NPIPB3

171

Q92617
KLRVMRSVNKEKFKQ

RBM34

356

P42696
SKKFKKKQQGKRRTQ

NSD1

2096

Q96L73
SKKGISRLDKQMRKF

IWS1

781

Q96ST2
KINGKRKTARKQKMF

NPIPB12

171

F8W0I5
KQMKKFKGLKRFSLS

PBRM1

1266

Q86U86
RKMRAEKRKKNAPKE

LLPH

11

Q9BRT6
TREMVRAQNKKKKKS

DDX54

81

Q8TDD1
AQRKKAGAKGQQMRK

EBNA1BP2

221

Q99848
ELKKMLSKQRRAQKK

NAA16

591

Q6N069
NGKRKTARKQKMFQR

NPIPB8

191

E9PQR5
DKLLRFRKQRKKMAK

JAKMIP3

431

Q5VZ66
KKKNFLNAKKAMRAL

EVC2

1291

Q86UK5
KINGKRKTARKQKMF

NPIPB5

171

A8MRT5
LKRKMLRDKQNKKNS

TUBGCP2

156

Q9BSJ2
KINGKRKTARKQKMF

NPIPB7

171

O75200
RKVKKSKQKPMNVGL

DDX18

51

Q9NVP1
ERKKRKQFQDLGRKM

DDX23

191

Q9BUQ8
KINGKRKTARKQKMF

NPIPB4

171

C9JG80
KRLRKKFAQKMLRKA

RPL7

31

P18124
KINGKRKTARKQKMF

NPIPB15

171

A6NHN6
MTQGKKKKRAANRSI

MFSD14A

1

Q96MC6
KKKRAANRSIMLAKK

MFSD14A

6

Q96MC6
KINGKRKTARKQKMF

NPIPB11

171

E5RHQ5
RCQKIGRQKLAKKMF

CLPSL1

106

A2RUU4
MGKQKKTRKYATMKR

FCF1

1

Q9Y324
KLQKKQMREFRGNTK

CEP63

116

Q96MT8
KKKFEGMRSRNKLLS

CCDC13

346

Q8IYE1
MKKKKVGRKPKTQQS

ELF2

171

Q15723
KMPGQSVRKKTRKAK

AHCTF1

1766

Q8WYP5
ISDTKKKQGMKKRSN

DDX10

816

Q13206
RQKFQKVLKSKMKKR

GPR22

371

Q99680
RKVTAAMGKKKIAKR

RPL27

51

P61353
KAKKIKARMNFRAKE

SCAPER

871

Q9BY12
FAMNKDKKRKFKRRE

DSEL

951

Q8IZU8
NGKRKTARKQKMFQR

NPIPB6

191

E9PJ23
RNNMAVKKSRLKSKQ

CEBPG

71

P53567
KINGKRKTARKQKMF

NPIPB9

186

F8W1W9
KINGKRKTARKQKMF

NPIPB13

171

A6NJU9
KMRRKKRFAKQGNKW

MMP28

116

Q9H239
MFGLKVKKKRNKAEK

FER1L6

1

Q2WGJ9
RNMRFAKKHNKKGLK

RPL29

41

P47914
HLMQNGKRLKKKKTT

SYT1

316

P21579
RQKNMKKTQEISKGK

SERF1A

11

O75920
KFSMKAQNGFNKKRK

SMARCAD1

331

Q9H4L7
MKAVQRESGNRKKKN

PIK3C3

556

Q8NEB9
RQKNMKKQSDSVKGK

SERF2

11

P84101
KMKFKVNRRTQKSGI

SGO2

1196

Q562F6
NMTKKKVSQKKQRGR

SPIN2A

26

Q99865
EKMKELKKGRNSKFR

SWT1

181

Q5T5J6
MKQLKRKRKSNFSVQ

MSANTD4

1

Q8NCY6
LNRRKKMKLQGQFKG

RRP12

1261

Q5JTH9
KMRKFIKAKKRLIQM

CFAP210

296

Q0VFZ6
PKMQNAAKASRKKLK

SUPT6H

476

Q7KZ85
KKQEMKKRKTRGRCE

TSPYL2

406

Q9H2G4
KVFLMKDRKTNKSRG

RBMXL3

36

Q8N7X1
NGKKQQRKPLREKMK

PGF

196

P49763
RKHPQKKMIKKTQSF

PLEKHG4B

716

Q96PX9
NMTKKKVSQKKQRGR

SPIN2B

26

Q9BPZ2
MDRIKARQQKYKKGK

PIEZO2

1481

Q9H5I5
KMQRKSKKGQKANNL

ZNF292

1131

O60281
EGIKMPKTKRKKKNN

ZNF292

2326

O60281
QLRKQAKIMRKSGNK

WDFY4

516

Q6ZS81
NTDQRKNKFMKKIPK

SLC4A5

286

Q9BY07
NSRKKMKDCKLRKKQ

SLFN12

26

Q8IYM2
MTKKRKRQHDFQKVK

TEX10

1

Q9NXF1
MKNKGAKQKLKRKGA

ARHGAP31

1

Q2M1Z3
IMRFRKRKNFKKKRI

MRPL21

171

Q7Z2W9
KAQKRRKRKAKESGM

ZNF480

6

Q8WV37
RGKKQTAREMKKKIL

TNNT3

176

P45378
KEKRKRKKLERQCQM

TRMT10A

66

Q8TBZ6
MPKKKTGARKKAENR

ZNF330

1

Q9Y3S2
NYKPKKKSRQLKKMR

ZBTB38

921

Q8NAP3
EKKLARKQRKLANKM

WDR87

2136

Q6ZQQ6
MPKFKQRRRKLKAKA

PRR11

1

Q96HE9
RMKKLPKKSQNEKYR

TBRG1

21

Q3YBR2